Query 000755
Match_columns 1300
No_of_seqs 817 out of 5231
Neff 7.0
Searched_HMMs 46136
Date Mon Apr 1 23:05:59 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000755.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000755hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 6E-233 1E-237 2199.2 124.1 1073 222-1296 123-1380(1381)
2 PLN03130 ABC transporter C fam 100.0 2E-186 4E-191 1869.1 147.8 1258 7-1294 29-1477(1622)
3 PLN03232 ABC transporter C fam 100.0 1E-182 3E-187 1833.3 146.9 1257 7-1294 29-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 7E-179 2E-183 1799.0 148.4 1069 220-1291 200-1520(1522)
5 TIGR01271 CFTR_protein cystic 100.0 3E-170 7E-175 1709.5 128.9 1061 221-1293 3-1454(1490)
6 PTZ00243 ABC transporter; Prov 100.0 1E-161 2E-166 1626.5 127.3 1075 219-1294 57-1549(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 3E-128 7E-133 1206.6 95.4 923 359-1292 93-1226(1228)
8 PTZ00265 multidrug resistance 100.0 5E-121 1E-125 1222.1 120.1 997 288-1291 48-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 6.6E-76 1.4E-80 701.6 65.8 548 291-842 138-705 (716)
10 PRK11174 cysteine/glutathione 100.0 2.3E-74 4.9E-79 724.1 73.9 546 289-842 11-585 (588)
11 COG2274 SunT ABC-type bacterio 100.0 3.2E-73 6.9E-78 706.8 72.3 548 287-839 141-706 (709)
12 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.2E-71 1.3E-75 703.8 75.6 542 289-839 125-683 (686)
13 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.3E-71 1.2E-75 707.3 74.1 544 289-838 143-709 (710)
14 TIGR03375 type_I_sec_LssB type 100.0 3.3E-70 7.1E-75 698.0 73.9 537 288-830 135-689 (694)
15 TIGR00958 3a01208 Conjugate Tr 100.0 5.1E-70 1.1E-74 695.5 73.4 540 293-837 154-710 (711)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 3.5E-69 7.6E-74 689.9 74.5 539 291-838 147-706 (708)
17 PRK11176 lipid transporter ATP 100.0 1.8E-68 3.9E-73 670.1 74.4 545 291-840 16-578 (582)
18 COG1123 ATPase components of v 100.0 8.8E-71 1.9E-75 651.3 47.7 466 616-1291 5-532 (539)
19 TIGR02203 MsbA_lipidA lipid A 100.0 6.6E-68 1.4E-72 663.9 73.9 543 291-839 5-566 (571)
20 PRK10790 putative multidrug tr 100.0 1.4E-67 3E-72 663.0 76.9 542 291-841 14-575 (592)
21 PRK10261 glutathione transport 100.0 1.9E-70 4.2E-75 688.6 50.5 482 615-1289 11-565 (623)
22 KOG0058 Peptide exporter, ABC 100.0 2.1E-70 4.6E-75 654.4 42.6 402 890-1295 304-708 (716)
23 PRK15134 microcin C ABC transp 100.0 5.1E-70 1.1E-74 675.2 47.5 450 616-1282 5-519 (529)
24 TIGR02204 MsbA_rel ABC transpo 100.0 5.8E-67 1.3E-71 655.9 73.9 547 289-838 7-572 (576)
25 PRK11160 cysteine/glutathione 100.0 6.5E-67 1.4E-71 652.8 73.7 542 293-839 9-572 (574)
26 PRK13549 xylose transporter AT 100.0 6E-70 1.3E-74 671.2 44.6 438 616-1277 5-493 (506)
27 TIGR02868 CydC thiol reductant 100.0 3.8E-67 8.2E-72 650.8 69.5 505 292-801 5-529 (529)
28 PRK09700 D-allose transporter 100.0 9E-70 2E-74 670.5 44.6 436 616-1275 5-495 (510)
29 COG1132 MdlB ABC-type multidru 100.0 1.1E-66 2.4E-71 651.3 72.7 538 293-841 9-564 (567)
30 TIGR01846 type_I_sec_HlyB type 100.0 1.5E-66 3.3E-71 663.9 75.2 546 288-839 127-690 (694)
31 PRK13657 cyclic beta-1,2-gluca 100.0 3E-66 6.5E-71 650.0 75.0 540 293-841 12-570 (588)
32 TIGR03269 met_CoM_red_A2 methy 100.0 4.2E-69 9E-74 666.2 46.5 437 617-1278 1-517 (520)
33 PRK15439 autoinducer 2 ABC tra 100.0 5.9E-69 1.3E-73 662.2 46.3 445 616-1279 11-493 (510)
34 PRK10762 D-ribose transporter 100.0 5.4E-69 1.2E-73 661.9 44.1 431 616-1277 4-483 (501)
35 KOG0055 Multidrug/pheromone ex 100.0 2.1E-66 4.5E-71 651.0 67.5 543 295-841 659-1225(1228)
36 PRK10789 putative multidrug tr 100.0 6.4E-66 1.4E-70 643.7 71.5 529 309-841 4-550 (569)
37 PRK15064 ABC transporter ATP-b 100.0 6E-68 1.3E-72 656.9 52.9 480 617-1279 2-526 (530)
38 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-68 2.3E-73 659.7 44.3 438 617-1276 2-490 (500)
39 COG4988 CydD ABC-type transpor 100.0 1.4E-65 3.1E-70 603.7 67.8 529 304-842 4-556 (559)
40 TIGR01192 chvA glucan exporter 100.0 8.2E-65 1.8E-69 634.8 75.6 540 293-840 12-569 (585)
41 PRK11288 araG L-arabinose tran 100.0 4.4E-68 9.5E-73 653.9 45.1 433 616-1277 4-484 (501)
42 TIGR01842 type_I_sec_PrtD type 100.0 3E-65 6.5E-70 635.1 70.2 522 296-829 2-542 (544)
43 PRK10982 galactose/methyl gala 100.0 1.1E-67 2.4E-72 649.0 44.0 434 620-1276 2-478 (491)
44 TIGR02857 CydD thiol reductant 100.0 1.1E-64 2.4E-69 628.7 68.5 510 298-813 1-529 (529)
45 PRK11819 putative ABC transpor 100.0 3.9E-66 8.5E-71 643.1 54.9 480 616-1279 6-534 (556)
46 PTZ00265 multidrug resistance 100.0 1.5E-64 3.2E-69 678.4 73.8 541 294-839 819-1463(1466)
47 PRK10938 putative molybdenum t 100.0 3.3E-67 7.1E-72 645.0 43.5 438 616-1271 3-485 (490)
48 COG2274 SunT ABC-type bacterio 100.0 6.1E-67 1.3E-71 650.6 45.5 394 894-1291 313-708 (709)
49 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.9E-66 8.4E-71 643.1 52.7 479 616-1278 4-531 (552)
50 COG4987 CydC ABC-type transpor 100.0 1.9E-63 4.2E-68 575.3 62.5 540 290-838 7-570 (573)
51 PRK10636 putative ABC transpor 100.0 4.2E-65 9.1E-70 640.7 52.4 478 617-1277 2-516 (638)
52 TIGR00957 MRP_assoc_pro multi 100.0 1.1E-62 2.3E-67 667.5 73.5 549 288-840 952-1519(1522)
53 COG4172 ABC-type uncharacteriz 100.0 1.1E-64 2.3E-69 563.4 41.9 457 615-1287 5-525 (534)
54 COG1132 MdlB ABC-type multidru 100.0 4.2E-64 9.1E-69 628.1 47.9 392 894-1292 172-565 (567)
55 KOG0057 Mitochondrial Fe/S clu 100.0 4.4E-62 9.6E-67 564.1 59.0 520 313-838 43-583 (591)
56 PRK11147 ABC transporter ATPas 100.0 2E-63 4.4E-68 626.9 52.4 476 616-1277 3-527 (635)
57 PLN03130 ABC transporter C fam 100.0 1.5E-61 3.3E-66 655.0 73.3 548 288-841 901-1474(1622)
58 COG0488 Uup ATPase components 100.0 3.2E-63 7E-68 599.6 47.8 485 616-1279 3-526 (530)
59 PLN03232 ABC transporter C fam 100.0 8.1E-61 1.7E-65 648.3 70.9 475 363-841 972-1471(1495)
60 TIGR00956 3a01205 Pleiotropic 100.0 3.8E-63 8.3E-68 664.5 47.4 251 1013-1275 717-990 (1394)
61 PRK11174 cysteine/glutathione 100.0 2.9E-62 6.2E-67 614.6 48.8 393 894-1292 183-585 (588)
62 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4E-62 8.7E-67 622.8 50.7 384 899-1290 300-684 (686)
63 KOG0056 Heavy metal exporter H 100.0 2.3E-62 5E-67 551.3 41.8 532 305-842 220-775 (790)
64 PTZ00243 ABC transporter; Prov 100.0 5.1E-60 1.1E-64 639.5 72.3 471 369-841 1026-1546(1560)
65 PLN03073 ABC transporter F fam 100.0 1.2E-61 2.6E-66 610.8 52.3 478 615-1276 176-712 (718)
66 TIGR00958 3a01208 Conjugate Tr 100.0 4.4E-62 9.5E-67 622.6 46.5 385 895-1288 322-711 (711)
67 COG4987 CydC ABC-type transpor 100.0 1.9E-62 4.1E-67 567.1 38.3 386 897-1289 182-571 (573)
68 COG4988 CydD ABC-type transpor 100.0 1.2E-61 2.7E-66 570.5 44.4 388 901-1293 167-557 (559)
69 TIGR01257 rim_protein retinal- 100.0 4.9E-60 1.1E-64 631.2 64.6 216 1052-1279 1935-2160(2272)
70 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.9E-61 4E-66 619.3 48.2 390 896-1288 315-709 (710)
71 PRK10790 putative multidrug tr 100.0 3.6E-61 7.8E-66 604.8 49.8 388 898-1293 189-577 (592)
72 PRK11176 lipid transporter ATP 100.0 3.5E-61 7.5E-66 604.3 48.9 389 898-1292 189-580 (582)
73 KOG0056 Heavy metal exporter H 100.0 7.4E-63 1.6E-67 555.2 29.4 374 915-1292 400-775 (790)
74 TIGR01193 bacteriocin_ABC ABC- 100.0 2.8E-61 6E-66 617.2 47.8 391 893-1289 314-707 (708)
75 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.6E-59 7.7E-64 581.0 65.0 512 292-821 9-551 (555)
76 COG4618 ArpD ABC-type protease 100.0 1.5E-59 3.3E-64 537.5 56.3 529 288-830 11-561 (580)
77 TIGR03375 type_I_sec_LssB type 100.0 9.7E-61 2.1E-65 610.9 48.4 383 894-1279 305-689 (694)
78 PRK11160 cysteine/glutathione 100.0 2.9E-60 6.2E-65 593.1 48.9 392 893-1290 180-573 (574)
79 PRK13409 putative ATPase RIL; 100.0 8.2E-61 1.8E-65 593.7 39.9 422 621-1272 78-536 (590)
80 TIGR01271 CFTR_protein cystic 100.0 1.1E-57 2.3E-62 616.9 72.6 474 364-842 948-1453(1490)
81 TIGR02203 MsbA_lipidA lipid A 100.0 3.7E-59 8E-64 584.9 48.3 394 892-1291 172-568 (571)
82 COG1129 MglA ABC-type sugar tr 100.0 2.6E-59 5.6E-64 550.8 43.0 444 615-1275 7-487 (500)
83 TIGR01846 type_I_sec_HlyB type 100.0 5.5E-59 1.2E-63 594.4 49.3 388 899-1291 303-692 (694)
84 KOG0057 Mitochondrial Fe/S clu 100.0 1.9E-59 4.1E-64 542.3 40.1 375 910-1292 211-587 (591)
85 PRK13657 cyclic beta-1,2-gluca 100.0 2.7E-58 5.9E-63 578.1 49.6 397 891-1292 173-571 (588)
86 TIGR02204 MsbA_rel ABC transpo 100.0 6.1E-58 1.3E-62 574.4 48.9 395 894-1291 178-575 (576)
87 PRK10522 multidrug transporter 100.0 4.4E-56 9.5E-61 553.1 65.1 508 290-821 3-530 (547)
88 COG5265 ATM1 ABC-type transpor 100.0 2.9E-59 6.2E-64 524.5 30.4 384 901-1289 110-496 (497)
89 PRK10789 putative multidrug tr 100.0 2.6E-57 5.6E-62 566.3 49.2 389 899-1293 162-552 (569)
90 TIGR02868 CydC thiol reductant 100.0 9.9E-58 2.1E-62 566.6 43.3 350 898-1250 178-529 (529)
91 TIGR01192 chvA glucan exporter 100.0 1.2E-56 2.7E-61 561.2 49.7 397 892-1294 174-573 (585)
92 PLN03140 ABC transporter G fam 100.0 5.4E-56 1.2E-60 592.8 58.6 211 1054-1274 867-1106(1470)
93 TIGR01842 type_I_sec_PrtD type 100.0 1.6E-56 3.4E-61 557.0 47.4 374 899-1278 166-542 (544)
94 COG3845 ABC-type uncharacteriz 100.0 9.8E-57 2.1E-61 517.0 38.1 444 615-1276 3-490 (501)
95 TIGR02857 CydD thiol reductant 100.0 7.6E-56 1.7E-60 549.7 44.8 358 900-1262 170-529 (529)
96 COG5265 ATM1 ABC-type transpor 100.0 4.3E-55 9.2E-60 491.0 40.3 463 371-838 12-495 (497)
97 TIGR00954 3a01203 Peroxysomal 100.0 3.1E-53 6.7E-58 535.1 60.7 503 301-815 97-653 (659)
98 KOG0054 Multidrug resistance-a 100.0 8.1E-53 1.8E-57 541.1 62.6 474 363-838 880-1372(1381)
99 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.9E-51 6.2E-56 510.2 44.3 363 899-1270 177-551 (555)
100 COG4618 ArpD ABC-type protease 100.0 8E-51 1.7E-55 466.0 35.2 366 908-1279 193-561 (580)
101 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.8E-51 1.5E-55 461.4 27.8 238 1053-1292 1-238 (275)
102 KOG0927 Predicted transporter 100.0 4.2E-50 9.1E-55 462.4 27.9 473 614-1270 73-587 (614)
103 PRK10522 multidrug transporter 100.0 5.7E-48 1.2E-52 480.4 44.5 355 899-1271 172-531 (547)
104 PRK14257 phosphate ABC transpo 100.0 2.7E-47 5.8E-52 442.7 26.3 257 1019-1282 36-317 (329)
105 KOG0062 ATPase component of AB 100.0 5.3E-47 1.1E-51 434.8 28.1 457 615-1270 79-560 (582)
106 COG1126 GlnQ ABC-type polar am 100.0 1E-46 2.2E-51 393.7 21.7 217 1054-1283 2-230 (240)
107 TIGR00954 3a01203 Peroxysomal 100.0 3.9E-44 8.5E-49 452.5 41.4 358 891-1264 256-653 (659)
108 COG1135 AbcC ABC-type metal io 100.0 1.3E-45 2.7E-50 403.5 21.8 225 1055-1290 2-244 (339)
109 PRK14257 phosphate ABC transpo 100.0 8.7E-45 1.9E-49 421.7 25.1 264 550-831 23-315 (329)
110 cd03288 ABCC_SUR2 The SUR doma 100.0 6.6E-44 1.4E-48 402.5 29.1 240 1051-1290 16-255 (257)
111 COG1125 OpuBA ABC-type proline 100.0 9.4E-45 2E-49 385.1 20.7 219 1055-1286 2-233 (309)
112 COG1117 PstB ABC-type phosphat 100.0 1.2E-44 2.7E-49 375.8 18.2 220 1053-1281 6-240 (253)
113 cd03252 ABCC_Hemolysin The ABC 100.0 2E-43 4.4E-48 393.9 27.3 234 1055-1289 1-235 (237)
114 cd03244 ABCC_MRP_domain2 Domai 100.0 4.4E-43 9.5E-48 387.0 26.4 221 1053-1273 1-221 (221)
115 COG1120 FepC ABC-type cobalami 100.0 2.3E-43 4.9E-48 387.6 20.7 213 1054-1279 2-229 (258)
116 COG1127 Ttg2A ABC-type transpo 100.0 2E-42 4.4E-47 366.7 23.7 225 1052-1289 6-246 (263)
117 cd03251 ABCC_MsbA MsbA is an e 100.0 3.4E-42 7.4E-47 383.3 26.8 231 1055-1286 1-232 (234)
118 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.4E-42 3.1E-47 379.3 21.7 209 1054-1279 4-228 (254)
119 COG1126 GlnQ ABC-type polar am 100.0 1.5E-42 3.2E-47 362.5 20.0 203 616-832 2-228 (240)
120 cd03254 ABCC_Glucan_exporter_l 100.0 6.9E-42 1.5E-46 379.6 26.0 226 1053-1279 1-227 (229)
121 cd03253 ABCC_ATM1_transporter 100.0 1.2E-41 2.5E-46 379.5 27.6 233 1055-1289 1-234 (236)
122 cd03289 ABCC_CFTR2 The CFTR su 100.0 7E-42 1.5E-46 387.8 26.2 222 616-840 2-236 (275)
123 cd03369 ABCC_NFT1 Domain 2 of 100.0 9.1E-42 2E-46 372.9 25.9 207 1049-1273 1-207 (207)
124 TIGR02314 ABC_MetN D-methionin 100.0 6.8E-42 1.5E-46 398.2 25.2 219 1055-1284 2-236 (343)
125 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-41 3.7E-46 374.1 26.1 219 1053-1271 1-220 (220)
126 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.1E-41 4.6E-46 377.9 27.0 233 1055-1288 1-235 (238)
127 COG3839 MalK ABC-type sugar tr 100.0 1.2E-41 2.6E-46 387.4 23.1 217 1054-1285 3-230 (338)
128 COG1124 DppF ABC-type dipeptid 100.0 1.8E-41 4E-46 361.6 22.4 226 1054-1290 3-243 (252)
129 cd03260 ABC_PstB_phosphate_tra 100.0 2.1E-41 4.6E-46 375.2 23.1 211 1055-1276 1-227 (227)
130 cd03261 ABC_Org_Solvent_Resist 100.0 3E-41 6.6E-46 376.0 23.4 212 1055-1279 1-227 (235)
131 COG1122 CbiO ABC-type cobalt t 100.0 3.3E-41 7E-46 370.8 21.6 215 1054-1280 3-230 (235)
132 COG2884 FtsE Predicted ATPase 100.0 2E-41 4.3E-46 346.1 17.9 207 1055-1273 2-221 (223)
133 PRK13631 cbiO cobalt transport 100.0 6.9E-41 1.5E-45 387.9 24.5 219 1051-1279 18-266 (320)
134 PRK14250 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 371.3 26.9 222 1054-1288 3-231 (241)
135 PRK14269 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 372.5 26.4 219 1054-1281 2-233 (246)
136 COG3638 ABC-type phosphate/pho 100.0 6.2E-41 1.3E-45 354.6 20.3 212 1054-1277 3-236 (258)
137 COG1136 SalX ABC-type antimicr 100.0 1.9E-40 4.2E-45 357.8 24.1 204 1055-1269 2-222 (226)
138 COG1116 TauB ABC-type nitrate/ 100.0 1.7E-40 3.6E-45 357.9 23.0 219 1054-1293 3-239 (248)
139 PRK11650 ugpC glycerol-3-phosp 100.0 2.4E-40 5.3E-45 388.1 26.4 218 1054-1285 3-231 (356)
140 PRK11153 metN DL-methionine tr 100.0 2.6E-40 5.6E-45 387.3 25.9 220 1055-1285 2-237 (343)
141 COG1245 Predicted ATPase, RNas 100.0 1.7E-40 3.8E-45 375.0 23.3 395 642-1264 97-531 (591)
142 PRK11432 fbpC ferric transport 100.0 2.9E-40 6.2E-45 386.5 25.7 218 1053-1285 5-233 (351)
143 COG3842 PotA ABC-type spermidi 100.0 1.1E-40 2.4E-45 381.5 21.1 219 1053-1286 4-234 (352)
144 PRK10744 pstB phosphate transp 100.0 6.5E-40 1.4E-44 370.7 27.1 222 1052-1282 11-248 (260)
145 PRK14242 phosphate transporter 100.0 4.5E-40 9.8E-45 370.6 25.6 219 1054-1281 6-240 (253)
146 PRK13650 cbiO cobalt transport 100.0 3E-40 6.5E-45 376.9 24.4 215 1054-1279 4-230 (279)
147 cd03248 ABCC_TAP TAP, the Tran 100.0 3E-40 6.6E-45 365.7 23.7 217 1051-1267 8-226 (226)
148 cd03263 ABC_subfamily_A The AB 100.0 2.4E-40 5.3E-45 364.9 22.5 210 1055-1276 1-219 (220)
149 PRK13637 cbiO cobalt transport 100.0 3.4E-40 7.4E-45 377.8 24.3 216 1054-1278 2-234 (287)
150 TIGR03265 PhnT2 putative 2-ami 100.0 3.4E-40 7.4E-45 386.5 24.8 218 1054-1286 4-232 (353)
151 TIGR00972 3a0107s01c2 phosphat 100.0 6E-40 1.3E-44 368.3 25.7 221 1055-1284 2-238 (247)
152 cd03296 ABC_CysA_sulfate_impor 100.0 5.3E-40 1.2E-44 366.9 25.1 213 1054-1281 2-229 (239)
153 PRK14247 phosphate ABC transpo 100.0 6E-40 1.3E-44 369.0 25.5 224 1054-1286 3-242 (250)
154 cd03256 ABC_PhnC_transporter A 100.0 3.2E-40 7E-45 369.0 23.1 211 1055-1277 1-233 (241)
155 PRK14273 phosphate ABC transpo 100.0 7.7E-40 1.7E-44 369.0 26.3 223 1053-1284 6-244 (254)
156 TIGR00960 3a0501s02 Type II (G 100.0 2.3E-40 5E-45 364.1 21.6 202 1055-1267 2-216 (216)
157 PRK13647 cbiO cobalt transport 100.0 4.4E-40 9.5E-45 374.6 23.8 211 1054-1276 4-225 (274)
158 PRK13537 nodulation ABC transp 100.0 4.5E-40 9.9E-45 379.6 24.2 213 1053-1279 6-228 (306)
159 cd03219 ABC_Mj1267_LivG_branch 100.0 3.9E-40 8.5E-45 367.2 22.9 212 1055-1279 1-233 (236)
160 PRK14259 phosphate ABC transpo 100.0 9.3E-40 2E-44 371.1 26.3 223 1050-1281 9-256 (269)
161 PRK14267 phosphate ABC transpo 100.0 6.7E-40 1.5E-44 369.2 24.7 223 1054-1285 4-244 (253)
162 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.5E-40 1.6E-44 366.4 24.6 220 1055-1284 1-231 (242)
163 PRK14235 phosphate transporter 100.0 1.2E-39 2.5E-44 370.0 26.3 222 1051-1281 16-254 (267)
164 cd03258 ABC_MetN_methionine_tr 100.0 5.4E-40 1.2E-44 365.5 23.1 214 1055-1279 2-231 (233)
165 PRK13635 cbiO cobalt transport 100.0 7E-40 1.5E-44 373.7 24.6 214 1054-1278 5-229 (279)
166 PRK10851 sulfate/thiosulfate t 100.0 1E-39 2.2E-44 382.5 26.2 216 1054-1284 2-232 (353)
167 cd03259 ABC_Carb_Solutes_like 100.0 4.5E-40 9.8E-45 361.0 21.4 202 1055-1271 1-213 (213)
168 TIGR03258 PhnT 2-aminoethylpho 100.0 9E-40 2E-44 383.4 24.9 219 1052-1285 3-235 (362)
169 PRK09536 btuD corrinoid ABC tr 100.0 9.6E-40 2.1E-44 386.5 25.0 220 1054-1288 3-236 (402)
170 cd03291 ABCC_CFTR1 The CFTR su 100.0 5.2E-39 1.1E-43 365.7 30.0 237 590-834 16-252 (282)
171 TIGR02315 ABC_phnC phosphonate 100.0 8.1E-40 1.8E-44 366.3 23.0 211 1055-1277 2-234 (243)
172 TIGR01186 proV glycine betaine 100.0 6.9E-40 1.5E-44 383.4 23.1 206 1069-1285 6-226 (363)
173 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-39 2.9E-44 355.0 23.8 199 1055-1266 1-204 (204)
174 PRK09452 potA putrescine/sperm 100.0 1.7E-39 3.8E-44 382.4 26.5 217 1053-1284 13-240 (375)
175 COG1116 TauB ABC-type nitrate/ 100.0 4.3E-40 9.3E-45 354.8 19.4 190 616-819 3-212 (248)
176 PRK13643 cbiO cobalt transport 100.0 1.2E-39 2.5E-44 373.6 24.1 213 1055-1278 2-233 (288)
177 PRK13646 cbiO cobalt transport 100.0 1.2E-39 2.6E-44 373.2 24.1 216 1054-1279 2-236 (286)
178 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-39 2.6E-44 359.9 23.2 212 1055-1278 1-221 (222)
179 cd03265 ABC_DrrA DrrA is the A 100.0 1.3E-39 2.8E-44 359.2 23.2 208 1055-1276 1-219 (220)
180 PRK11000 maltose/maltodextrin 100.0 1.4E-39 3.1E-44 384.1 25.1 217 1054-1285 3-230 (369)
181 PRK14268 phosphate ABC transpo 100.0 1.9E-39 4.2E-44 366.5 25.0 223 1053-1284 11-248 (258)
182 PRK14245 phosphate ABC transpo 100.0 1.8E-39 3.9E-44 365.1 24.6 220 1054-1282 3-238 (250)
183 PRK14248 phosphate ABC transpo 100.0 2.9E-39 6.2E-44 367.1 26.3 220 1053-1281 20-255 (268)
184 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-39 2.3E-44 330.4 20.2 210 1055-1281 2-222 (231)
185 PRK14274 phosphate ABC transpo 100.0 3.1E-39 6.7E-44 365.0 26.2 221 1054-1283 12-248 (259)
186 COG1131 CcmA ABC-type multidru 100.0 9.4E-40 2E-44 373.7 22.1 213 1054-1279 4-227 (293)
187 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-39 2.7E-44 355.4 22.0 198 1056-1268 1-205 (205)
188 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.4E-39 5.2E-44 360.9 24.7 211 1055-1279 2-222 (236)
189 PRK11629 lolD lipoprotein tran 100.0 2E-39 4.2E-44 361.0 23.9 208 1054-1272 5-228 (233)
190 PRK14237 phosphate transporter 100.0 3.6E-39 7.9E-44 365.9 26.5 220 1053-1281 19-254 (267)
191 PRK14251 phosphate ABC transpo 100.0 2.1E-39 4.6E-44 364.7 24.3 223 1054-1285 4-242 (251)
192 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.3E-39 2.7E-44 370.0 22.7 218 1056-1286 26-258 (269)
193 cd03252 ABCC_Hemolysin The ABC 100.0 4E-39 8.7E-44 359.4 26.2 219 617-837 1-233 (237)
194 PRK14240 phosphate transporter 100.0 3.9E-39 8.5E-44 362.4 26.3 222 1053-1283 2-239 (250)
195 PRK14244 phosphate ABC transpo 100.0 1.4E-39 3E-44 366.3 22.5 221 1055-1284 6-243 (251)
196 PRK13636 cbiO cobalt transport 100.0 2.1E-39 4.5E-44 370.8 24.3 213 1054-1278 5-231 (283)
197 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-39 2.4E-44 359.2 21.2 202 1055-1267 1-218 (218)
198 PRK14239 phosphate transporter 100.0 2.6E-39 5.7E-44 364.2 24.7 220 1054-1282 5-240 (252)
199 cd03250 ABCC_MRP_domain1 Domai 100.0 2.6E-39 5.5E-44 352.7 23.7 201 617-817 1-204 (204)
200 PRK13651 cobalt transporter AT 100.0 2.4E-39 5.3E-44 372.9 24.8 215 1054-1279 2-255 (305)
201 PRK11831 putative ABC transpor 100.0 2.6E-39 5.6E-44 367.5 24.7 223 1054-1289 7-244 (269)
202 cd03266 ABC_NatA_sodium_export 100.0 1.6E-39 3.4E-44 358.0 22.2 205 1055-1271 2-218 (218)
203 PRK13634 cbiO cobalt transport 100.0 2E-39 4.3E-44 372.0 23.9 216 1054-1279 2-236 (290)
204 PRK14262 phosphate ABC transpo 100.0 2.8E-39 6E-44 363.6 24.6 224 1054-1286 3-242 (250)
205 PRK15079 oligopeptide ABC tran 100.0 3.5E-39 7.7E-44 375.1 26.2 223 1054-1286 8-259 (331)
206 cd03247 ABCC_cytochrome_bd The 100.0 1.9E-39 4E-44 346.2 21.8 178 1055-1271 1-178 (178)
207 cd03268 ABC_BcrA_bacitracin_re 100.0 1.8E-39 4E-44 354.9 22.2 202 1055-1271 1-208 (208)
208 PRK14256 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 361.9 26.3 224 1052-1284 2-242 (252)
209 PRK13652 cbiO cobalt transport 100.0 3.1E-39 6.7E-44 368.3 24.6 213 1054-1278 3-227 (277)
210 TIGR03411 urea_trans_UrtD urea 100.0 2.8E-39 6E-44 361.8 23.7 212 1054-1278 2-231 (242)
211 PRK10619 histidine/lysine/argi 100.0 4.1E-39 8.9E-44 363.6 25.3 218 1052-1281 3-244 (257)
212 cd03264 ABC_drug_resistance_li 100.0 1.7E-39 3.6E-44 356.0 21.3 202 1055-1271 1-211 (211)
213 TIGR03005 ectoine_ehuA ectoine 100.0 3.7E-39 8.1E-44 363.0 24.7 217 1055-1284 1-242 (252)
214 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.2E-38 2.7E-43 362.6 29.1 219 1052-1288 37-256 (282)
215 PRK13632 cbiO cobalt transport 100.0 3.8E-39 8.3E-44 366.5 24.9 215 1054-1279 7-232 (271)
216 PRK14249 phosphate ABC transpo 100.0 6.5E-39 1.4E-43 360.8 26.3 219 1054-1281 4-238 (251)
217 PRK13536 nodulation factor exp 100.0 3E-39 6.6E-44 376.6 24.3 213 1053-1279 40-262 (340)
218 KOG0066 eIF2-interacting prote 100.0 5.9E-39 1.3E-43 357.6 25.2 479 616-1268 264-780 (807)
219 COG1135 AbcC ABC-type metal io 100.0 1.1E-39 2.4E-44 357.0 19.0 203 617-831 2-233 (339)
220 cd03218 ABC_YhbG The ABC trans 100.0 2.6E-39 5.6E-44 359.7 22.4 211 1055-1278 1-222 (232)
221 PRK14270 phosphate ABC transpo 100.0 7.6E-39 1.6E-43 360.2 26.4 219 1054-1281 4-238 (251)
222 PRK14238 phosphate transporter 100.0 9.1E-39 2E-43 363.3 27.3 224 1050-1282 20-259 (271)
223 PRK13640 cbiO cobalt transport 100.0 4.2E-39 9.1E-44 368.1 24.4 216 1053-1279 4-233 (282)
224 PRK11308 dppF dipeptide transp 100.0 7.1E-39 1.5E-43 372.2 26.7 224 1054-1287 5-253 (327)
225 PRK14266 phosphate ABC transpo 100.0 6.3E-39 1.4E-43 360.7 25.4 223 1054-1285 3-241 (250)
226 COG1118 CysA ABC-type sulfate/ 100.0 1.3E-39 2.8E-44 355.3 19.1 217 1054-1285 2-234 (345)
227 PRK09493 glnQ glutamine ABC tr 100.0 4.9E-39 1.1E-43 359.4 24.3 213 1055-1280 2-227 (240)
228 PRK13644 cbiO cobalt transport 100.0 4.9E-39 1.1E-43 366.0 24.7 213 1055-1279 2-225 (274)
229 TIGR01288 nodI ATP-binding ABC 100.0 3.8E-39 8.3E-44 372.1 24.0 212 1054-1279 4-225 (303)
230 COG4555 NatA ABC-type Na+ tran 100.0 1.2E-39 2.7E-44 335.3 17.6 212 1055-1279 2-223 (245)
231 PRK14261 phosphate ABC transpo 100.0 6.9E-39 1.5E-43 361.0 25.4 225 1054-1287 6-246 (253)
232 TIGR02211 LolD_lipo_ex lipopro 100.0 5E-39 1.1E-43 354.8 23.8 203 1055-1268 2-220 (221)
233 PRK14236 phosphate transporter 100.0 9.2E-39 2E-43 363.6 26.5 222 1051-1281 22-259 (272)
234 PRK00349 uvrA excinuclease ABC 100.0 1.8E-38 3.8E-43 405.5 32.1 353 735-1291 483-940 (943)
235 PRK14260 phosphate ABC transpo 100.0 6.7E-39 1.5E-43 362.3 25.1 221 1053-1282 6-247 (259)
236 PRK11607 potG putrescine trans 100.0 6.1E-39 1.3E-43 378.4 25.8 219 1052-1285 17-246 (377)
237 PRK10575 iron-hydroxamate tran 100.0 4.2E-39 9.2E-44 365.1 23.5 212 1054-1278 11-237 (265)
238 PRK11264 putative amino-acid A 100.0 7.2E-39 1.6E-43 360.2 25.2 215 1054-1281 3-236 (250)
239 TIGR02769 nickel_nikE nickel i 100.0 7.1E-39 1.5E-43 363.2 25.3 224 1054-1287 2-249 (265)
240 PRK10070 glycine betaine trans 100.0 6.4E-39 1.4E-43 379.3 25.7 204 1070-1284 42-260 (400)
241 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.9E-39 6.2E-44 356.5 21.2 203 1055-1273 1-218 (220)
242 COG1137 YhbG ABC-type (unclass 100.0 1.5E-40 3.3E-45 341.7 10.2 216 1053-1281 3-231 (243)
243 TIGR03522 GldA_ABC_ATP gliding 100.0 5.1E-39 1.1E-43 370.5 24.1 211 1055-1279 3-222 (301)
244 cd03301 ABC_MalK_N The N-termi 100.0 2.9E-39 6.3E-44 354.6 21.0 202 1055-1271 1-213 (213)
245 PRK14243 phosphate transporter 100.0 1E-38 2.2E-43 361.6 26.1 220 1054-1282 10-252 (264)
246 PRK14254 phosphate ABC transpo 100.0 1.4E-38 3E-43 364.1 27.3 221 1052-1281 37-272 (285)
247 cd03225 ABC_cobalt_CbiO_domain 100.0 2.6E-39 5.6E-44 354.5 20.5 200 1056-1266 1-211 (211)
248 PRK14252 phosphate ABC transpo 100.0 9.6E-39 2.1E-43 362.2 25.7 223 1050-1281 12-252 (265)
249 PRK11124 artP arginine transpo 100.0 6.8E-39 1.5E-43 358.7 24.1 213 1054-1279 2-231 (242)
250 PRK13642 cbiO cobalt transport 100.0 7.2E-39 1.6E-43 365.3 24.6 215 1054-1279 4-230 (277)
251 TIGR02673 FtsE cell division A 100.0 2.8E-39 6.2E-44 354.9 20.5 200 1055-1266 2-214 (214)
252 PRK11231 fecE iron-dicitrate t 100.0 5.6E-39 1.2E-43 362.1 23.3 212 1054-1278 2-227 (255)
253 PRK13648 cbiO cobalt transport 100.0 6.2E-39 1.3E-43 364.5 23.7 215 1054-1279 7-232 (269)
254 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.4E-39 1.4E-43 350.6 22.8 199 616-830 4-228 (254)
255 PRK10253 iron-enterobactin tra 100.0 6.7E-39 1.4E-43 363.4 23.6 214 1052-1278 5-233 (265)
256 PRK11022 dppD dipeptide transp 100.0 1.3E-38 2.7E-43 370.2 26.3 226 1054-1287 3-252 (326)
257 cd03292 ABC_FtsE_transporter F 100.0 4.3E-39 9.3E-44 353.5 21.2 201 1055-1267 1-214 (214)
258 PRK13633 cobalt transporter AT 100.0 9.1E-39 2E-43 365.0 24.6 215 1054-1279 4-234 (280)
259 cd03290 ABCC_SUR1_N The SUR do 100.0 9E-39 1.9E-43 352.1 23.7 210 1056-1266 2-218 (218)
260 PRK11614 livF leucine/isoleuci 100.0 7.5E-39 1.6E-43 357.2 23.4 212 1054-1278 5-226 (237)
261 PRK13641 cbiO cobalt transport 100.0 9.8E-39 2.1E-43 365.9 24.9 215 1054-1279 2-235 (287)
262 PRK10895 lipopolysaccharide AB 100.0 1E-38 2.3E-43 356.9 24.5 212 1054-1278 3-226 (241)
263 PRK14241 phosphate transporter 100.0 1.1E-38 2.3E-43 360.5 24.6 219 1054-1281 4-245 (258)
264 PRK13649 cbiO cobalt transport 100.0 7.2E-39 1.6E-43 366.1 23.5 215 1055-1279 3-235 (280)
265 COG1125 OpuBA ABC-type proline 100.0 1.8E-39 3.9E-44 344.9 17.0 203 617-832 2-228 (309)
266 PRK14253 phosphate ABC transpo 100.0 1.6E-38 3.4E-43 357.3 25.7 219 1054-1281 3-236 (249)
267 PRK14265 phosphate ABC transpo 100.0 2E-38 4.2E-43 361.1 26.7 223 1050-1281 16-261 (274)
268 PRK14275 phosphate ABC transpo 100.0 1.4E-38 3E-43 364.4 25.6 225 1052-1285 37-277 (286)
269 PRK14271 phosphate ABC transpo 100.0 2.4E-38 5.2E-43 360.6 27.3 220 1054-1282 21-255 (276)
270 PRK13548 hmuV hemin importer A 100.0 1.6E-38 3.4E-43 358.9 25.5 212 1054-1278 2-230 (258)
271 PRK09473 oppD oligopeptide tra 100.0 1.8E-38 3.8E-43 369.4 26.6 228 1053-1288 11-261 (330)
272 PRK14263 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 358.9 25.9 222 1054-1284 8-251 (261)
273 PRK10584 putative ABC transpor 100.0 1.1E-38 2.5E-43 353.7 23.8 207 1053-1270 5-227 (228)
274 KOG0065 Pleiotropic drug resis 100.0 3.6E-38 7.8E-43 395.8 31.2 199 1067-1275 802-1018(1391)
275 PRK13645 cbiO cobalt transport 100.0 1E-38 2.2E-43 366.4 24.0 217 1052-1278 4-240 (289)
276 COG0410 LivF ABC-type branched 100.0 5.6E-39 1.2E-43 340.5 20.1 215 1054-1280 3-228 (237)
277 cd03246 ABCC_Protease_Secretio 100.0 8.5E-39 1.8E-43 339.6 21.6 172 1055-1267 1-173 (173)
278 PRK15112 antimicrobial peptide 100.0 1.5E-38 3.2E-43 360.9 24.8 228 1054-1292 4-254 (267)
279 PRK14272 phosphate ABC transpo 100.0 1.7E-38 3.7E-43 357.6 24.7 224 1054-1286 4-244 (252)
280 TIGR03410 urea_trans_UrtE urea 100.0 1.2E-38 2.7E-43 353.8 23.3 211 1055-1277 1-220 (230)
281 PRK14258 phosphate ABC transpo 100.0 2E-38 4.4E-43 358.7 25.4 222 1053-1283 6-250 (261)
282 PRK11247 ssuB aliphatic sulfon 100.0 1.7E-38 3.8E-43 357.5 24.5 204 1053-1274 11-219 (257)
283 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-38 2.8E-43 349.0 22.9 200 1055-1271 1-211 (211)
284 cd03300 ABC_PotA_N PotA is an 100.0 1.1E-38 2.3E-43 354.8 22.1 211 1055-1280 1-222 (232)
285 PRK13638 cbiO cobalt transport 100.0 1.2E-38 2.5E-43 362.6 22.8 212 1055-1279 2-226 (271)
286 cd03235 ABC_Metallic_Cations A 100.0 6.7E-39 1.5E-43 351.8 20.1 197 1056-1271 1-213 (213)
287 cd03254 ABCC_Glucan_exporter_l 100.0 2.8E-38 6.2E-43 350.7 25.2 211 616-829 2-226 (229)
288 PRK11300 livG leucine/isoleuci 100.0 1.8E-38 4E-43 357.9 24.0 212 1054-1278 5-243 (255)
289 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3E-38 6.5E-43 352.6 25.3 214 617-831 1-228 (238)
290 cd03251 ABCC_MsbA MsbA is an e 100.0 4E-38 8.6E-43 350.6 26.0 214 617-832 1-228 (234)
291 PRK13639 cbiO cobalt transport 100.0 1.4E-38 3.1E-43 362.5 23.0 213 1055-1279 2-227 (275)
292 COG3839 MalK ABC-type sugar tr 100.0 8.9E-39 1.9E-43 364.0 21.1 202 616-831 3-225 (338)
293 cd03269 ABC_putative_ATPase Th 100.0 9.5E-39 2.1E-43 349.8 20.5 200 1055-1271 1-210 (210)
294 cd03257 ABC_NikE_OppD_transpor 100.0 2.3E-38 5E-43 351.0 23.8 207 1055-1271 2-228 (228)
295 cd03288 ABCC_SUR2 The SUR doma 100.0 5E-38 1.1E-42 354.7 26.9 216 614-831 17-245 (257)
296 COG1120 FepC ABC-type cobalami 100.0 1.1E-38 2.4E-43 350.7 20.8 200 616-830 2-229 (258)
297 PRK14255 phosphate ABC transpo 100.0 2.4E-38 5.3E-43 356.3 24.2 222 1054-1284 5-242 (252)
298 PRK10771 thiQ thiamine transpo 100.0 3.7E-38 8.1E-43 350.5 25.4 208 1055-1279 2-220 (232)
299 TIGR01188 drrA daunorubicin re 100.0 1.3E-38 2.8E-43 367.6 22.4 203 1063-1279 2-214 (302)
300 PRK15093 antimicrobial peptide 100.0 3.5E-38 7.6E-43 367.6 26.1 226 1054-1287 3-257 (330)
301 PRK10247 putative ABC transpor 100.0 1.8E-38 4E-43 351.3 22.4 209 1054-1274 7-223 (225)
302 TIGR03873 F420-0_ABC_ATP propo 100.0 2.1E-38 4.6E-43 357.6 23.3 211 1055-1278 2-226 (256)
303 PRK14264 phosphate ABC transpo 100.0 5.1E-38 1.1E-42 362.8 26.8 221 1051-1280 42-291 (305)
304 cd03244 ABCC_MRP_domain2 Domai 100.0 4.1E-38 8.9E-43 347.5 24.9 206 616-823 2-220 (221)
305 PRK10908 cell division protein 100.0 3.9E-38 8.4E-43 348.0 24.6 203 1055-1269 2-217 (222)
306 TIGR00968 3a0106s01 sulfate AB 100.0 3.5E-38 7.6E-43 351.8 24.5 211 1055-1280 1-222 (237)
307 TIGR03415 ABC_choXWV_ATP choli 100.0 2.4E-38 5.2E-43 371.9 24.2 213 1060-1285 30-261 (382)
308 cd03253 ABCC_ATM1_transporter 100.0 5.7E-38 1.2E-42 349.8 26.1 215 617-834 1-229 (236)
309 cd03299 ABC_ModC_like Archeal 100.0 3E-38 6.5E-43 351.9 23.2 210 1055-1280 1-221 (235)
310 cd03262 ABC_HisP_GlnQ_permease 100.0 1.6E-38 3.4E-43 348.7 20.5 200 1055-1267 1-213 (213)
311 PRK10418 nikD nickel transport 100.0 6.8E-38 1.5E-42 353.1 25.7 224 1054-1290 4-243 (254)
312 PRK14246 phosphate ABC transpo 100.0 6.6E-38 1.4E-42 353.5 25.5 226 1053-1287 9-250 (257)
313 COG3842 PotA ABC-type spermidi 100.0 1.1E-38 2.3E-43 365.1 19.2 203 615-831 4-228 (352)
314 COG1127 Ttg2A ABC-type transpo 100.0 4.6E-38 1E-42 333.6 22.2 206 614-834 6-240 (263)
315 PRK11701 phnK phosphonate C-P 100.0 6.7E-38 1.5E-42 354.0 24.8 222 1054-1287 6-250 (258)
316 TIGR01277 thiQ thiamine ABC tr 100.0 4.4E-38 9.6E-43 345.3 22.6 201 1055-1272 1-212 (213)
317 PRK11144 modC molybdate transp 100.0 5.2E-38 1.1E-42 369.0 24.7 212 1055-1282 2-222 (352)
318 TIGR01978 sufC FeS assembly AT 100.0 3.8E-38 8.3E-43 352.7 22.2 211 1055-1277 1-233 (243)
319 COG1118 CysA ABC-type sulfate/ 100.0 1.5E-38 3.2E-43 347.1 17.8 201 616-831 2-229 (345)
320 COG4615 PvdE ABC-type sideroph 100.0 3.6E-35 7.8E-40 326.5 44.3 506 291-821 4-529 (546)
321 PRK09984 phosphonate/organopho 100.0 9.7E-38 2.1E-42 353.5 24.4 221 1054-1290 4-251 (262)
322 COG4178 ABC-type uncharacteriz 100.0 1.4E-34 3.1E-39 347.5 52.6 445 361-815 106-588 (604)
323 PRK13547 hmuV hemin importer A 100.0 1E-37 2.2E-42 354.2 24.3 211 1055-1278 2-244 (272)
324 COG1117 PstB ABC-type phosphat 100.0 1.4E-38 3E-43 330.8 15.7 206 615-831 6-239 (253)
325 cd03245 ABCC_bacteriocin_expor 100.0 1.6E-37 3.5E-42 342.5 24.8 205 616-822 2-220 (220)
326 TIGR03740 galliderm_ABC gallid 100.0 1.7E-37 3.7E-42 343.1 24.7 204 1055-1275 1-210 (223)
327 cd03228 ABCC_MRP_Like The MRP 100.0 9.2E-38 2E-42 331.0 21.2 171 1055-1266 1-171 (171)
328 PRK11248 tauB taurine transpor 100.0 1.1E-37 2.4E-42 351.2 23.0 201 1055-1273 2-215 (255)
329 COG3840 ThiQ ABC-type thiamine 100.0 5E-38 1.1E-42 318.4 17.8 198 617-831 2-221 (231)
330 COG0411 LivG ABC-type branched 100.0 1.6E-38 3.5E-43 339.5 14.9 214 1054-1280 4-241 (250)
331 PRK00635 excinuclease ABC subu 100.0 1.4E-36 3.1E-41 401.1 35.2 328 735-1278 470-906 (1809)
332 COG1122 CbiO ABC-type cobalt t 100.0 9E-38 2E-42 343.6 20.0 201 616-830 3-229 (235)
333 TIGR02142 modC_ABC molybdenum 100.0 1.5E-37 3.3E-42 365.6 23.3 212 1059-1285 4-228 (354)
334 COG1136 SalX ABC-type antimicr 100.0 2E-37 4.4E-42 334.4 22.2 192 617-819 2-221 (226)
335 TIGR00630 uvra excinuclease AB 100.0 2E-36 4.3E-41 386.2 34.4 338 735-1276 481-923 (924)
336 cd03229 ABC_Class3 This class 100.0 2.3E-37 5E-42 330.2 21.2 172 1055-1266 1-178 (178)
337 TIGR02323 CP_lyasePhnK phospho 100.0 6.8E-37 1.5E-41 344.8 26.2 222 1054-1287 3-247 (253)
338 PRK10419 nikE nickel transport 100.0 4.3E-37 9.2E-42 349.1 24.7 221 1054-1285 3-247 (268)
339 PRK11650 ugpC glycerol-3-phosp 100.0 3.2E-37 6.9E-42 361.8 24.0 202 616-831 3-226 (356)
340 cd03230 ABC_DR_subfamily_A Thi 100.0 2.3E-37 5E-42 328.6 20.6 170 1055-1267 1-173 (173)
341 TIGR02314 ABC_MetN D-methionin 100.0 2.4E-37 5.2E-42 360.1 22.4 202 617-830 2-231 (343)
342 TIGR02982 heterocyst_DevA ABC 100.0 1.9E-37 4.2E-42 342.0 20.5 202 1055-1267 2-219 (220)
343 PRK13631 cbiO cobalt transport 100.0 4.6E-37 1E-41 356.0 24.4 205 615-830 20-266 (320)
344 COG0444 DppD ABC-type dipeptid 100.0 3.2E-37 7E-42 343.2 21.6 228 1055-1290 2-255 (316)
345 cd03261 ABC_Org_Solvent_Resist 100.0 3.6E-37 7.8E-42 343.2 22.0 199 617-830 1-227 (235)
346 PRK09544 znuC high-affinity zi 100.0 8.9E-37 1.9E-41 342.8 24.7 208 1054-1288 4-217 (251)
347 COG4175 ProV ABC-type proline/ 100.0 3.6E-37 7.7E-42 335.9 20.1 221 1054-1285 4-261 (386)
348 cd03297 ABC_ModC_molybdenum_tr 100.0 4.6E-37 1E-41 337.5 21.2 199 1056-1271 3-214 (214)
349 cd03217 ABC_FeS_Assembly ABC-t 100.0 8.6E-37 1.9E-41 331.8 22.2 185 1055-1277 1-192 (200)
350 PRK15056 manganese/iron transp 100.0 1.1E-36 2.3E-41 346.6 23.8 209 1054-1278 6-230 (272)
351 cd03290 ABCC_SUR1_N The SUR do 100.0 1.2E-36 2.6E-41 335.1 23.5 198 618-817 2-218 (218)
352 PRK11432 fbpC ferric transport 100.0 8.9E-37 1.9E-41 357.1 23.3 202 615-831 5-228 (351)
353 cd03234 ABCG_White The White s 100.0 8.2E-37 1.8E-41 338.4 21.4 203 1055-1271 4-226 (226)
354 cd03233 ABC_PDR_domain1 The pl 100.0 9E-37 1.9E-41 332.1 21.3 190 1054-1271 3-202 (202)
355 cd03213 ABCG_EPDR ABCG transpo 100.0 6.7E-37 1.4E-41 331.1 20.0 182 1054-1271 3-194 (194)
356 cd03248 ABCC_TAP TAP, the Tran 100.0 1.9E-36 4.2E-41 335.4 23.7 204 614-818 9-226 (226)
357 PRK13643 cbiO cobalt transport 100.0 1.3E-36 2.8E-41 348.4 23.0 202 617-829 2-233 (288)
358 PRK13637 cbiO cobalt transport 100.0 1.2E-36 2.7E-41 348.4 22.8 205 616-830 2-235 (287)
359 cd03215 ABC_Carb_Monos_II This 100.0 7.6E-37 1.6E-41 327.3 19.5 172 1054-1267 4-182 (182)
360 TIGR01186 proV glycine betaine 100.0 5.5E-37 1.2E-41 358.9 20.0 190 631-831 5-221 (363)
361 cd03260 ABC_PstB_phosphate_tra 100.0 9.6E-37 2.1E-41 338.0 20.5 197 617-826 1-226 (227)
362 PRK13634 cbiO cobalt transport 100.0 1.7E-36 3.6E-41 347.9 23.0 204 616-830 2-236 (290)
363 TIGR02770 nickel_nikD nickel i 100.0 1.6E-36 3.6E-41 336.8 22.2 206 1071-1286 1-223 (230)
364 cd03296 ABC_CysA_sulfate_impor 100.0 2.1E-36 4.6E-41 337.9 23.2 199 617-830 3-227 (239)
365 COG4559 ABC-type hemin transpo 100.0 9.7E-37 2.1E-41 316.3 18.8 212 1055-1279 2-231 (259)
366 CHL00131 ycf16 sulfate ABC tra 100.0 2.3E-36 5.1E-41 340.2 23.6 211 1054-1276 7-239 (252)
367 COG1124 DppF ABC-type dipeptid 100.0 1.6E-36 3.4E-41 323.9 20.6 204 616-830 3-232 (252)
368 cd03232 ABC_PDR_domain2 The pl 100.0 1E-36 2.2E-41 329.1 19.5 181 1054-1271 3-192 (192)
369 PRK13650 cbiO cobalt transport 100.0 2.4E-36 5.2E-41 344.8 23.6 203 616-830 4-230 (279)
370 cd03214 ABC_Iron-Siderophores_ 100.0 1.2E-36 2.6E-41 325.2 19.8 177 1056-1271 1-180 (180)
371 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-36 3.3E-41 338.4 21.3 202 617-829 1-232 (236)
372 PRK09452 potA putrescine/sperm 100.0 2.2E-36 4.9E-41 356.0 23.9 202 615-831 13-236 (375)
373 TIGR03608 L_ocin_972_ABC putat 100.0 9.4E-37 2E-41 332.9 18.9 193 1057-1262 1-206 (206)
374 PRK03695 vitamin B12-transport 100.0 2.4E-36 5.3E-41 339.1 22.8 205 1056-1278 2-222 (248)
375 cd03369 ABCC_NFT1 Domain 2 of 100.0 4.4E-36 9.6E-41 328.0 24.2 189 615-823 5-206 (207)
376 TIGR03265 PhnT2 putative 2-ami 100.0 1.6E-36 3.5E-41 355.5 22.0 201 616-831 4-226 (353)
377 COG1123 ATPase components of v 100.0 2.9E-36 6.3E-41 358.0 23.5 227 1054-1289 5-255 (539)
378 PRK14269 phosphate ABC transpo 100.0 2.9E-36 6.3E-41 338.3 22.2 204 616-830 2-231 (246)
379 PRK15439 autoinducer 2 ABC tra 100.0 4.3E-36 9.2E-41 370.6 25.9 212 1054-1278 11-229 (510)
380 TIGR00960 3a0501s02 Type II (G 100.0 1.6E-36 3.5E-41 333.7 19.8 189 617-818 2-216 (216)
381 PRK13646 cbiO cobalt transport 100.0 2.8E-36 6.1E-41 345.5 22.4 204 616-830 2-236 (286)
382 PRK14242 phosphate transporter 100.0 3.5E-36 7.5E-41 339.0 22.8 205 615-830 5-238 (253)
383 PRK11000 maltose/maltodextrin 100.0 2.8E-36 6.1E-41 356.0 23.0 200 616-830 3-224 (369)
384 COG3638 ABC-type phosphate/pho 100.0 1.1E-36 2.3E-41 322.5 17.3 200 616-828 3-236 (258)
385 PRK13651 cobalt transporter AT 100.0 4E-36 8.7E-41 346.2 23.7 204 616-830 2-255 (305)
386 cd03259 ABC_Carb_Solutes_like 100.0 2E-36 4.3E-41 332.2 20.0 191 617-822 1-213 (213)
387 cd03223 ABCD_peroxisomal_ALDP 100.0 3E-36 6.6E-41 317.8 20.6 164 1055-1266 1-164 (166)
388 TIGR00972 3a0107s01c2 phosphat 100.0 3.4E-36 7.4E-41 337.9 22.3 203 617-830 2-233 (247)
389 PRK14250 phosphate ABC transpo 100.0 5.9E-36 1.3E-40 334.7 24.1 201 616-830 3-222 (241)
390 PRK10851 sulfate/thiosulfate t 100.0 3.8E-36 8.2E-41 352.4 23.4 200 616-830 2-227 (353)
391 PRK14273 phosphate ABC transpo 100.0 5.1E-36 1.1E-40 337.9 23.5 205 615-830 6-239 (254)
392 cd03267 ABC_NatA_like Similar 100.0 2.7E-36 5.8E-41 336.4 20.8 191 1069-1271 34-236 (236)
393 TIGR03258 PhnT 2-aminoethylpho 100.0 3.1E-36 6.7E-41 353.6 22.2 202 615-831 4-230 (362)
394 cd03226 ABC_cobalt_CbiO_domain 100.0 2.7E-36 5.9E-41 329.2 20.2 188 618-819 1-205 (205)
395 PRK13647 cbiO cobalt transport 100.0 3.6E-36 7.9E-41 342.4 22.1 198 616-827 4-225 (274)
396 TIGR02315 ABC_phnC phosphonate 100.0 4.9E-36 1.1E-40 335.7 22.7 197 617-827 2-233 (243)
397 cd03265 ABC_DrrA DrrA is the A 100.0 2.9E-36 6.3E-41 332.6 20.3 196 617-827 1-219 (220)
398 cd03256 ABC_PhnC_transporter A 100.0 4.5E-36 9.7E-41 335.6 22.1 198 617-828 1-233 (241)
399 PRK13549 xylose transporter AT 100.0 4.2E-36 9E-41 370.7 24.0 211 1054-1277 5-231 (506)
400 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.2E-36 6.9E-41 332.3 20.5 196 617-824 1-218 (220)
401 PRK09700 D-allose transporter 100.0 3.6E-36 7.8E-41 371.8 23.2 212 1054-1278 5-234 (510)
402 PRK10762 D-ribose transporter 100.0 4.4E-36 9.5E-41 370.1 23.9 211 1054-1277 4-229 (501)
403 cd03231 ABC_CcmA_heme_exporter 100.0 5.9E-36 1.3E-40 325.6 21.9 194 1055-1262 1-198 (201)
404 cd03263 ABC_subfamily_A The AB 100.0 4.6E-36 1E-40 330.9 21.1 198 617-827 1-219 (220)
405 cd03268 ABC_BcrA_bacitracin_re 100.0 6E-36 1.3E-40 327.2 21.5 191 617-822 1-208 (208)
406 TIGR01184 ntrCD nitrate transp 100.0 3.9E-36 8.5E-41 333.7 20.3 190 1072-1277 1-203 (230)
407 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.8E-36 8.2E-41 331.2 19.9 190 617-818 1-218 (218)
408 PRK09580 sufC cysteine desulfu 100.0 5.2E-36 1.1E-40 336.6 21.2 210 1055-1276 2-233 (248)
409 PRK11153 metN DL-methionine tr 100.0 5.5E-36 1.2E-40 350.8 21.9 202 617-830 2-231 (343)
410 PRK13635 cbiO cobalt transport 100.0 1.2E-35 2.7E-40 338.9 24.2 202 616-830 5-230 (279)
411 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1E-35 2.3E-40 331.7 23.0 199 617-830 2-222 (236)
412 cd03216 ABC_Carb_Monos_I This 100.0 1.1E-35 2.3E-40 312.7 21.7 159 1055-1269 1-162 (163)
413 cd03224 ABC_TM1139_LivF_branch 100.0 7.6E-36 1.6E-40 329.6 21.5 198 617-828 1-220 (222)
414 PRK10744 pstB phosphate transp 100.0 1.2E-35 2.7E-40 335.8 23.6 205 615-830 12-245 (260)
415 PRK11629 lolD lipoprotein tran 100.0 9.9E-36 2.1E-40 331.2 22.3 196 616-823 5-228 (233)
416 PRK13644 cbiO cobalt transport 100.0 1.4E-35 3E-40 337.7 23.9 199 617-829 2-224 (274)
417 cd03218 ABC_YhbG The ABC trans 100.0 9E-36 2E-40 331.3 21.7 198 617-829 1-222 (232)
418 cd03235 ABC_Metallic_Cations A 100.0 7.1E-36 1.5E-40 327.9 20.4 188 619-822 2-213 (213)
419 COG4619 ABC-type uncharacteriz 100.0 3.3E-36 7.1E-41 301.1 16.0 197 1063-1269 10-214 (223)
420 cd03258 ABC_MetN_methionine_tr 100.0 1E-35 2.2E-40 331.2 21.8 201 617-829 2-230 (233)
421 PRK14235 phosphate transporter 100.0 1.3E-35 2.9E-40 336.8 23.1 207 613-830 16-252 (267)
422 cd03301 ABC_MalK_N The N-termi 100.0 7.4E-36 1.6E-40 327.7 20.2 191 617-822 1-213 (213)
423 PRK11247 ssuB aliphatic sulfon 100.0 1.6E-35 3.5E-40 333.5 23.2 196 615-825 11-219 (257)
424 PRK00635 excinuclease ABC subu 100.0 4.2E-34 9.1E-39 377.8 40.1 94 1185-1278 1381-1483(1809)
425 PRK11607 potG putrescine trans 100.0 1.1E-35 2.5E-40 350.6 22.8 203 615-831 18-241 (377)
426 cd03266 ABC_NatA_sodium_export 100.0 1E-35 2.3E-40 327.6 21.0 194 617-822 2-218 (218)
427 PRK13641 cbiO cobalt transport 100.0 1.7E-35 3.6E-40 339.3 23.4 203 616-829 2-234 (287)
428 PRK13636 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 338.8 23.0 201 616-830 5-232 (283)
429 PRK14274 phosphate ABC transpo 100.0 1.8E-35 3.9E-40 334.3 23.2 204 616-830 12-244 (259)
430 PRK13537 nodulation ABC transp 100.0 1.6E-35 3.4E-40 341.9 22.9 201 615-830 6-228 (306)
431 PRK10938 putative molybdenum t 100.0 1.2E-35 2.6E-40 365.5 23.3 211 1054-1278 3-224 (490)
432 PRK13538 cytochrome c biogenes 100.0 1.4E-35 3E-40 323.4 21.1 194 1055-1262 2-202 (204)
433 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.2E-36 1.8E-40 338.8 20.0 198 618-830 26-251 (269)
434 PRK14239 phosphate transporter 100.0 1.6E-35 3.6E-40 333.4 22.2 204 616-830 5-237 (252)
435 PRK14245 phosphate ABC transpo 100.0 1.5E-35 3.2E-40 333.3 21.6 204 616-830 3-235 (250)
436 cd03247 ABCC_cytochrome_bd The 100.0 1.8E-35 3.9E-40 315.6 21.0 166 617-822 1-178 (178)
437 PRK13649 cbiO cobalt transport 100.0 1.8E-35 3.9E-40 338.1 22.5 203 616-829 2-234 (280)
438 PRK14237 phosphate transporter 100.0 2.6E-35 5.7E-40 334.3 23.6 205 615-830 19-252 (267)
439 PRK09493 glnQ glutamine ABC tr 100.0 2.3E-35 5.1E-40 329.7 22.7 199 617-830 2-226 (240)
440 PRK15134 microcin C ABC transp 100.0 3.3E-35 7.1E-40 364.7 26.1 220 1054-1281 5-249 (529)
441 PRK14248 phosphate ABC transpo 100.0 2.1E-35 4.7E-40 335.4 22.4 205 615-830 20-253 (268)
442 cd03264 ABC_drug_resistance_li 100.0 1.4E-35 3.1E-40 325.0 20.2 190 617-822 1-211 (211)
443 PRK13645 cbiO cobalt transport 100.0 2.3E-35 4.9E-40 338.7 22.8 204 615-829 5-240 (289)
444 PRK14251 phosphate ABC transpo 100.0 1.7E-35 3.7E-40 333.1 21.3 204 616-830 4-236 (251)
445 COG4598 HisP ABC-type histidin 100.0 3.8E-36 8.2E-41 303.1 14.2 217 1054-1283 6-246 (256)
446 TIGR01288 nodI ATP-binding ABC 100.0 2.7E-35 5.7E-40 340.2 23.4 201 615-830 3-225 (303)
447 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.5E-35 3.2E-40 331.7 20.6 202 617-830 1-226 (242)
448 PRK14259 phosphate ABC transpo 100.0 3.9E-35 8.4E-40 333.2 24.3 206 615-831 12-255 (269)
449 TIGR02211 LolD_lipo_ex lipopro 100.0 1.9E-35 4.2E-40 326.2 21.1 191 617-819 2-220 (221)
450 PRK13640 cbiO cobalt transport 100.0 2.9E-35 6.2E-40 336.5 23.2 203 615-830 4-233 (282)
451 cd03269 ABC_putative_ATPase Th 100.0 1.6E-35 3.4E-40 324.4 20.2 191 617-822 1-210 (210)
452 PRK13632 cbiO cobalt transport 100.0 3.3E-35 7.2E-40 334.3 23.6 202 616-830 7-232 (271)
453 PRK10619 histidine/lysine/argi 100.0 2.3E-35 5E-40 333.2 22.1 202 615-830 4-242 (257)
454 TIGR03411 urea_trans_UrtD urea 100.0 2.7E-35 5.8E-40 329.6 22.2 199 616-829 2-231 (242)
455 PRK10261 glutathione transport 100.0 1.6E-35 3.4E-40 372.9 22.8 224 1053-1284 11-264 (623)
456 PRK14249 phosphate ABC transpo 100.0 3.7E-35 8E-40 330.3 23.3 204 616-830 4-236 (251)
457 PRK14268 phosphate ABC transpo 100.0 2.5E-35 5.4E-40 333.0 21.9 205 615-830 11-243 (258)
458 PRK11231 fecE iron-dicitrate t 100.0 3.5E-35 7.6E-40 331.3 23.0 198 617-829 3-227 (255)
459 PRK14240 phosphate transporter 100.0 3.9E-35 8.4E-40 330.0 23.3 204 616-830 3-235 (250)
460 PRK09536 btuD corrinoid ABC tr 100.0 2.7E-35 5.8E-40 348.7 22.9 200 616-830 3-229 (402)
461 PRK14270 phosphate ABC transpo 100.0 3.8E-35 8.3E-40 330.2 22.9 204 616-830 4-236 (251)
462 PRK13543 cytochrome c biogenes 100.0 3.4E-35 7.5E-40 322.7 21.9 195 1054-1264 11-212 (214)
463 PRK11288 araG L-arabinose tran 100.0 3.2E-35 6.9E-40 362.4 24.2 207 1054-1273 4-224 (501)
464 PRK10982 galactose/methyl gala 100.0 2.5E-35 5.4E-40 362.7 23.1 208 1057-1277 1-222 (491)
465 PRK10247 putative ABC transpor 100.0 3.2E-35 7E-40 325.4 21.7 196 616-825 7-223 (225)
466 PRK13642 cbiO cobalt transport 100.0 4.5E-35 9.7E-40 334.1 23.5 203 616-830 4-230 (277)
467 PRK11264 putative amino-acid A 100.0 2.8E-35 6.1E-40 331.1 21.5 200 616-830 3-234 (250)
468 COG2884 FtsE Predicted ATPase 100.0 1.5E-35 3.3E-40 303.1 17.4 192 617-822 2-219 (223)
469 PRK11831 putative ABC transpor 100.0 3E-35 6.5E-40 334.2 21.9 200 616-830 7-234 (269)
470 PRK14238 phosphate transporter 100.0 4.4E-35 9.5E-40 333.2 23.1 205 615-830 23-256 (271)
471 PRK14247 phosphate ABC transpo 100.0 4.5E-35 9.7E-40 329.4 22.8 204 616-830 3-235 (250)
472 TIGR02324 CP_lyasePhnL phospho 100.0 3.1E-35 6.6E-40 325.3 21.1 198 1055-1262 2-222 (224)
473 PRK14243 phosphate transporter 100.0 5E-35 1.1E-39 331.6 23.3 204 616-830 10-249 (264)
474 PRK11300 livG leucine/isoleuci 100.0 4.1E-35 8.9E-40 330.7 22.4 199 616-829 5-243 (255)
475 cd03292 ABC_FtsE_transporter F 100.0 2.2E-35 4.7E-40 324.1 19.6 188 617-818 1-214 (214)
476 PRK11124 artP arginine transpo 100.0 5E-35 1.1E-39 327.5 22.7 199 616-829 2-230 (242)
477 PRK13540 cytochrome c biogenes 100.0 3.4E-35 7.4E-40 319.3 20.7 193 1055-1261 2-198 (200)
478 PRK13633 cobalt transporter AT 100.0 6.6E-35 1.4E-39 333.3 24.0 203 616-830 4-234 (280)
479 PRK10584 putative ABC transpor 100.0 4.9E-35 1.1E-39 324.6 22.3 194 616-821 6-227 (228)
480 PRK14236 phosphate transporter 100.0 4.9E-35 1.1E-39 333.1 22.9 205 615-830 24-257 (272)
481 TIGR03410 urea_trans_UrtE urea 100.0 3.5E-35 7.5E-40 326.2 21.1 197 617-827 1-219 (230)
482 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.2E-35 9.1E-40 321.2 21.4 189 617-822 1-211 (211)
483 PRK10575 iron-hydroxamate tran 100.0 4.8E-35 1E-39 332.0 22.6 200 615-829 10-237 (265)
484 TIGR02633 xylG D-xylose ABC tr 100.0 4E-35 8.6E-40 361.8 23.7 211 1055-1277 2-229 (500)
485 TIGR02673 FtsE cell division A 100.0 2.3E-35 5E-40 324.0 19.3 187 617-817 2-214 (214)
486 PRK13648 cbiO cobalt transport 100.0 7.6E-35 1.7E-39 331.0 24.1 202 616-830 7-232 (269)
487 PRK13548 hmuV hemin importer A 100.0 9.3E-35 2E-39 328.2 24.6 198 617-829 3-230 (258)
488 PRK14244 phosphate ABC transpo 100.0 3.6E-35 7.9E-40 330.4 21.1 203 617-830 6-238 (251)
489 PRK10895 lipopolysaccharide AB 100.0 6E-35 1.3E-39 326.7 22.7 199 616-829 3-226 (241)
490 PRK11614 livF leucine/isoleuci 100.0 7.5E-35 1.6E-39 325.0 23.4 204 616-829 5-226 (237)
491 PRK13638 cbiO cobalt transport 100.0 6.1E-35 1.3E-39 332.2 22.9 199 617-830 2-226 (271)
492 TIGR02769 nickel_nikE nickel i 100.0 7.3E-35 1.6E-39 330.4 23.3 208 616-834 2-245 (265)
493 PRK14253 phosphate ABC transpo 100.0 5.9E-35 1.3E-39 328.3 22.3 203 616-829 3-233 (249)
494 PRK14267 phosphate ABC transpo 100.0 5.3E-35 1.2E-39 329.4 22.0 204 616-830 4-238 (253)
495 cd03257 ABC_NikE_OppD_transpor 100.0 3.1E-35 6.7E-40 326.0 19.6 195 617-822 2-228 (228)
496 cd03223 ABCD_peroxisomal_ALDP 100.0 5.6E-35 1.2E-39 308.1 20.6 162 617-817 1-164 (166)
497 TIGR03005 ectoine_ehuA ectoine 100.0 5.7E-35 1.2E-39 329.0 22.0 199 617-830 1-237 (252)
498 PRK13652 cbiO cobalt transport 100.0 9.1E-35 2E-39 331.6 23.9 201 616-830 3-228 (277)
499 PRK10253 iron-enterobactin tra 100.0 8.1E-35 1.8E-39 330.1 23.3 201 614-829 5-233 (265)
500 PRK13536 nodulation factor exp 100.0 5.6E-35 1.2E-39 340.9 22.4 201 615-830 40-262 (340)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.1e-233 Score=2199.17 Aligned_cols=1073 Identities=48% Similarity=0.799 Sum_probs=1003.3
Q ss_pred CCCccCch--hHHHHHHhHHHHHHhcccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhhhcCCCccchhHHHHHHHhH
Q 000755 222 TPYSNASL--FSVLTFSWMGSLISLGNKKTLDLEDVPQLDSGDSVVGCFPIFRNKLEANRVEGNKVTAFKLTKALFFSAW 299 (1300)
Q Consensus 222 ~p~~~a~~--~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 299 (1300)
+|.+.++. +|++||||++|++++|||++|+.+|+|+|+++|+++.++++|++.|+++. ++ +.++|+++++++++||
T Consensus 123 ~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~-~~-~~~~psl~~al~~~f~ 200 (1381)
T KOG0054|consen 123 NPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKEL-GR-SGKKPSLLRALLRTFG 200 (1381)
T ss_pred CcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHh-cc-ccCCcHHHHHHHHHHH
Confidence 44455555 99999999999999999999999999999999999999999999999875 22 2257899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 300 KEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSM 379 (1300)
Q Consensus 300 ~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~ 379 (1300)
+++++.+++..+...+.+++|++++.+|+++++++...+.||+++++++++.++++++.++|+|..++.|+|+|+++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~ 280 (1381)
T KOG0054|consen 201 RTFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISA 280 (1381)
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHH
Confidence 99999999999999999999999999999999876566789999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 380 VYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPWLVILQVSLALLILYKNLGLASIAALFATVLIMLTNFP 459 (1300)
Q Consensus 380 Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~l~~~~~~~ 459 (1300)
||+|+|+++..+++.+++|+|+|+|++|++++.++++++|.+|..|+|+++++++||..+|+++++|++++++++|+|.+
T Consensus 281 IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~ 360 (1381)
T KOG0054|consen 281 IYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSF 360 (1381)
T ss_pred HHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 460 LGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWGAPTFVSV 539 (1300)
Q Consensus 460 ~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~ 539 (1300)
++++++++|++.|+.+|+|++.++|+|+|||+||+|+||+.|.++|++.|++|++++++..+..+++.+.++++|+++++
T Consensus 361 ~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~ 440 (1381)
T KOG0054|consen 361 LAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSV 440 (1381)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcceEE
Q 000755 540 ATFGACM-LLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSETAIE 618 (1300)
Q Consensus 540 ~~f~~~~-~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~ 618 (1300)
++|++|+ ..++.+++..+|+++++|++++.|+..+|+.++.+.|+++|++|+++||..+|.+.+..+..+....+.+|+
T Consensus 441 ~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~ 520 (1381)
T KOG0054|consen 441 VTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIE 520 (1381)
T ss_pred HHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEE
Confidence 9999999 778899999999999999999999999999999999999999999999999998876655334445567899
Q ss_pred EEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCeEEEEecCCcCCCCCHHH
Q 000755 619 IVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGNIED 698 (1300)
Q Consensus 619 i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~~ayv~Q~~~l~~~Ti~e 698 (1300)
++|++|+|+++++.++|+||||+|++|+++||||++||||||||++|+||+++.+|++.++|++|||||+||||||||||
T Consensus 521 i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvre 600 (1381)
T KOG0054|consen 521 IKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVRE 600 (1381)
T ss_pred EeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHHH
Confidence 99999999976667799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHH
Q 000755 699 NILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGS 778 (1300)
Q Consensus 699 NI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~ 778 (1300)
||+||.|||++||++|+++|+|++|++.||.||+|+|||||.||||||||||+||||+|+|+||||||||+||||+|+++
T Consensus 601 NILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~ 680 (1381)
T KOG0054|consen 601 NILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGK 680 (1381)
T ss_pred hhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHHHHHHHHHhhh---hcccCCC-
Q 000755 779 HLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVLVGAHQQALSA---LDSIEGG- 854 (1300)
Q Consensus 779 ~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~---~~~~~~~- 854 (1300)
|||++|+++.+++||+|+|||++++|++||+|++|+||+|.+.|+|+|+++.+.+|.++..+.....+. .+..+..
T Consensus 681 ~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 760 (1381)
T KOG0054|consen 681 HIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESGE 760 (1381)
T ss_pred HHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999888873322111111 0000000
Q ss_pred --------C-c----cccc----c-ccc-cCCCccccccc----------------------------------------
Q 000755 855 --------P-V----SERI----S-MNK-ENGGMDTTNGV---------------------------------------- 875 (1300)
Q Consensus 855 --------~-~----~~~~----~-~~~-~~~~e~~~~g~---------------------------------------- 875 (1300)
. . ..+. + ..+ ..++|+++.|.
T Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WL 840 (1381)
T KOG0054|consen 761 SSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWL 840 (1381)
T ss_pred cccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0000 0 000 01122223332
Q ss_pred ----------------------------------------------------------------------cccCcc--cc
Q 000755 876 ----------------------------------------------------------------------TMKEGN--ED 883 (1300)
Q Consensus 876 ----------------------------------------------------------------------~lp~gr--nr 883 (1300)
+.|.|| ||
T Consensus 841 s~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNR 920 (1381)
T KOG0054|consen 841 SYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNR 920 (1381)
T ss_pred HHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhh
Confidence 229999 99
Q ss_pred ccccc--h---------------------------------------------hhhhhhHHHHHHHHHHhhhhhhHHHHH
Q 000755 884 IQTDK--V---------------------------------------------DEQYYIPSARELSRLVGVCKAPVIQHF 916 (1300)
Q Consensus 884 ~s~D~--v---------------------------------------------~~~~y~~~~r~l~rl~~~~~sp~~~~~ 916 (1300)
||+|+ + +++||++++||++|++++++||+++||
T Consensus 921 FSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~ 1000 (1381)
T KOG0054|consen 921 FSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHF 1000 (1381)
T ss_pred cccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhH
Confidence 99999 3 789999999999999999999999999
Q ss_pred HHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHH
Q 000755 917 SETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAV 996 (1300)
Q Consensus 917 ~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l 996 (1300)
+|+++|+.|||||+++++|.+++..++|.+++++|...+++||+++|+|+++++++.+++++.+..+.+.++||.+|+++
T Consensus 1001 ~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLsl 1080 (1381)
T KOG0054|consen 1001 SETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSL 1080 (1381)
T ss_pred HHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988887777668899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCcceeeee
Q 000755 997 TYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGLT 1076 (1300)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~is 1076 (1300)
+|+++++..++|++++.+++|+.|+||||+.||+++|+|+|+..+..+||++||++|+|+|+|++++|+++.|+||||||
T Consensus 1081 syal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is 1160 (1381)
T KOG0054|consen 1081 SYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGIS 1160 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCce
Confidence 99999999999999999999999999999999999999977777776699999999999999999999999999999999
Q ss_pred EEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCCCCC
Q 000755 1077 CTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEY 1156 (1300)
Q Consensus 1077 l~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~~ 1156 (1300)
|+|+||||||||||||||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|.||||++++
T Consensus 1161 ~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~ 1240 (1381)
T KOG0054|consen 1161 FTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEY 1240 (1381)
T ss_pred EEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHH
Q 000755 1157 KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQ 1236 (1300)
Q Consensus 1157 ~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~ 1236 (1300)
+|++||+||++|+|++.|+++|+|||++|.|+|.|||.||||++||||||||+++|||||||||++|++||..||++||+
T Consensus 1241 sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~ 1320 (1381)
T KOG0054|consen 1241 SDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIRE 1320 (1381)
T ss_pred CHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHhhhcc
Q 000755 1237 HFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQRSS 1296 (1300)
Q Consensus 1237 ~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~~~~~ 1296 (1300)
.|++||||+||||++|++|||||+|||+|+|+|+|+|++|+++++|.|++++.++..++.
T Consensus 1321 ~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~~~ 1380 (1381)
T KOG0054|consen 1321 EFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALSSR 1380 (1381)
T ss_pred HhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999887653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.7e-186 Score=1869.15 Aligned_cols=1258 Identities=33% Similarity=0.541 Sum_probs=1030.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccchhhhcccchhhhHHHHHHHHHHHHHHHHHHHHhhhccc
Q 000755 7 FLLKPAFLRGISGSLHLVLLLGLFVSWVWKKLRVGVSDSEGYKERFKKKSVLRHKLILFCCFAVSVFNLVLCLLDYFSWF 86 (1300)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1300)
|-||+++.+..++..++++++.....+..++..+.. ..............+.+++|....+++...+... ....
T Consensus 29 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 102 (1622)
T PLN03130 29 YTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQ-----RFCLRSKWYNYFLALLAAYCTAEPLFRLVMGISV-LNLD 102 (1622)
T ss_pred CCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccC-----CccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccc
Confidence 779999988888777775444433333332210111 0000111112233445555555555443333332 2222
Q ss_pred CC-CCCcchhhHHHHHHHHHHHHHHHHHHHhhccccCCccccchhHHHHHHHH---HHhhhhhhhhhh-hhhhccccchh
Q 000755 87 GN-DWSGDKLVTLADLVLRTLGWGAICVYLHSQFFNSGQQRFPLLLRLWWGFY---LCLSCYCLVSDI-VLYAQHVSLSV 161 (1300)
Q Consensus 87 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~ 161 (1300)
+. .+.......+...++..+++++.......++. ... .+++.+++||++. .++.++ ... ..+... ...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~- 175 (1622)
T PLN03130 103 GQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYI-REF-RWYVRFAVIYVLVGDAVMLNLV---LSVKEYYSSF-VLY- 175 (1622)
T ss_pred cccccccchhHHhHHHHHHHHHHHHHHHHHHHHHH-hcC-CCcceeehhHHHhhHHHHHHHH---HHHHHHHhcc-ccc-
Confidence 21 22223333244445555555555543323332 222 5688999999887 555444 222 222220 011
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccccCCCccccccccccCCCCCCCCCccccccCCCCCCCCCCccCchhHHHHHHhHHHH
Q 000755 162 HYLVSDVVSVISGFVFCYVGFLKRDKGEDTLLLQETLLDGDSSIGNGEVSSIKSRGTDNVTPYSNASLFSVLTFSWMGSL 241 (1300)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~pl 241 (1300)
.......+++..+++.+ +.+...++.. ...|... +... + .+-++.+...+.+||++||+|||++|+|++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~-~~~~-~--~~~~~~~~~~~~~pe~~a~~~s~~~F~W~~pl 246 (1622)
T PLN03130 176 LYISEVAAQVLFGILLL-VYFPNLDPYP----GYTPIGS-ESVD-D--YEYEELPGGEQICPERHANIFSRIFFGWMTPL 246 (1622)
T ss_pred eehhHHHHHHHHHHHHH-HHHhcCCCCc----ccccccc-cccc-c--ccccCCcccCCCCcccccCHHHHHHHHHHHHH
Confidence 12222233333333331 1121111100 1111100 0000 0 00011233467789999999999999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhhhcCCCccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 242 ISLGNKKTLDLEDVPQLDSGDSVVGCFPIFRNKLEANRVEGNKVTAFKLTKALFFSAWKEIVFTAILALLYTLANYVGPY 321 (1300)
Q Consensus 242 ~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ 321 (1300)
+++||+++|+.+|||+|+++|+++.++++|++.|+++. +.++++++++++++||+.++..+++.++..++.+++|+
T Consensus 247 ~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P~ 322 (1622)
T PLN03130 247 MQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL----KKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQFVGPL 322 (1622)
T ss_pred HHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh----ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998764 22457899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHH
Q 000755 322 LIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEII 401 (1300)
Q Consensus 322 ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iv 401 (1300)
+++.+++++.+.. ....++++++++++..++.+++.+++.+...+++.++|..++..+|+|.++++...+++.++|+++
T Consensus 323 ll~~li~~v~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~iv 401 (1622)
T PLN03130 323 LLNLLLESMQNGE-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKIT 401 (1622)
T ss_pred HHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHH
Confidence 9999999997543 223467777766776677777777888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 402 NFMTVDAERIGDFGWYMHDPWLVILQVSLALLILYKNLGLASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKV 481 (1300)
Q Consensus 402 nl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~ 481 (1300)
|+|++|++++.+++..+|.+|..|++++++++++|..+|+++++++++++++++++.++.++.++.+++.++.+|+|.+.
T Consensus 402 nl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~ 481 (1622)
T PLN03130 402 NLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGL 481 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Q 000755 482 TSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSAL 561 (1300)
Q Consensus 482 ~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~l 561 (1300)
++|+++||++||+|+||+.|.+++++.|++|.+..++..+...+..++....|.++++++|++|.+.++.+|++.+|+++
T Consensus 482 ~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~l 561 (1622)
T PLN03130 482 MNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTSL 561 (1622)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999988888777777777788888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeE
Q 000755 562 ATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLK 641 (1300)
Q Consensus 562 al~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~ 641 (1300)
++++.+..|+..+|..+..+.++++|++||++|+..+|....... +.......|+++|++|+|+...++++|+|+||+
T Consensus 562 ~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~ 639 (1622)
T PLN03130 562 SLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP--PLEPGLPAISIKNGYFSWDSKAERPTLSNINLD 639 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cccCCCCceEEEeeEEEccCCCCCceeeceeEE
Confidence 999999999999999999999999999999999987654321111 111122469999999999854457899999999
Q ss_pred EeCCcEEEEEcCCCCChHHHHHHHhccccCCc-cEEEEcCeEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcc
Q 000755 642 VFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS-GTLKLCGTKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSL 720 (1300)
Q Consensus 642 i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-G~i~~~g~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l 720 (1300)
|++|++++|+||+|||||||+++|+|+++|++ |+|.+.++++||+|+||+|++||||||+||+|+|+++|++++++|+|
T Consensus 640 i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L 719 (1622)
T PLN03130 640 VPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTAL 719 (1622)
T ss_pred ecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecC
Q 000755 721 KKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQ 800 (1300)
Q Consensus 721 ~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~ 800 (1300)
++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++|+.+.+++||+|+|||+
T Consensus 720 ~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~ 799 (1622)
T PLN03130 720 QHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQ 799 (1622)
T ss_pred HHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred CCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHHHHHHHHHhhhh----cc----cCCCCccc--------ccc---
Q 000755 801 VEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVLVGAHQQALSAL----DS----IEGGPVSE--------RIS--- 861 (1300)
Q Consensus 801 ~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~----~~----~~~~~~~~--------~~~--- 861 (1300)
+++++.||+|++|++|+|++.|+|+|+++.++.|..+...+....+.. +. .+..+..+ ...
T Consensus 800 l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (1622)
T PLN03130 800 LHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKK 879 (1622)
T ss_pred HhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999988877877765432100000 00 00000000 000
Q ss_pred cc-----ccCCCccccccc-------------------------------------------------------------
Q 000755 862 MN-----KENGGMDTTNGV------------------------------------------------------------- 875 (1300)
Q Consensus 862 ~~-----~~~~~e~~~~g~------------------------------------------------------------- 875 (1300)
.. ...++|+++.|.
T Consensus 880 ~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~ 959 (1622)
T PLN03130 880 KSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIY 959 (1622)
T ss_pred cccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHH
Confidence 00 001112222221
Q ss_pred ----------------------------------------------cccCcc--ccccccc--h----------------
Q 000755 876 ----------------------------------------------TMKEGN--EDIQTDK--V---------------- 889 (1300)
Q Consensus 876 ----------------------------------------------~lp~gr--nr~s~D~--v---------------- 889 (1300)
+.|+|| |||++|+ +
T Consensus 960 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~ 1039 (1622)
T PLN03130 960 ALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIF 1039 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 118999 9999998 3
Q ss_pred -----------------------------hhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHH
Q 000755 890 -----------------------------DEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNM 940 (1300)
Q Consensus 890 -----------------------------~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~ 940 (1300)
++.+|.+++|+++|++..+++|+++|+.|+++|+.|||+|+++++|.+.+.
T Consensus 1040 ~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~ 1119 (1622)
T PLN03130 1040 QLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEING 1119 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 941 KLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGV-----IEPAIAGLAVTYGLNLNMLQAWVIWNLCN 1015 (1300)
Q Consensus 941 ~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~gl~l~~~~~~~~~~~~~~~~~~~ 1015 (1300)
+..|...+..+.....++|+..++++++++++.+...+.+.. .+. ..++.+|++++|++.+...+.++.+.+..
T Consensus 1120 ~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~-~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~ 1198 (1622)
T PLN03130 1120 RSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQ-NGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASL 1198 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998877665544433322 221 22678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcH
Q 000755 1016 LENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGK 1095 (1300)
Q Consensus 1016 le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGK 1095 (1300)
+|+.++|+||+.+|++.|+|++...+...+++.||..|.|+|+||+++|+++.++||+|+||+|++||++||||||||||
T Consensus 1199 ~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGK 1278 (1622)
T PLN03130 1199 AENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGK 1278 (1622)
T ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCH
Confidence 99999999999999999888754333445666899999999999999998877789999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHH
Q 000755 1096 STLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVR 1175 (1300)
Q Consensus 1096 STLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~ 1175 (1300)
|||+++|+|+++|++|+|.|||+||++++++++|++|++|||||.+|+||||+||+|+.+++|+++|++++++++++++.
T Consensus 1279 STLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~ 1358 (1622)
T PLN03130 1279 SSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIR 1358 (1622)
T ss_pred HHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc
Q 000755 1176 NKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID 1255 (1300)
Q Consensus 1176 ~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~ 1255 (1300)
++|+||||+|+|+|.|||||||||+||||||+++|+|||||||||+||.+|++.|+++|++.+++||||+||||++++.+
T Consensus 1359 ~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~ 1438 (1622)
T PLN03130 1359 RNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID 1438 (1622)
T ss_pred hCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHhhh
Q 000755 1256 SDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQR 1294 (1300)
Q Consensus 1256 ~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~~~ 1294 (1300)
||||+||++|+|+|+|+|++|+++++|.|++|+++....
T Consensus 1439 ~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1439 CDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAA 1477 (1622)
T ss_pred CCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChh
Confidence 999999999999999999999987789999999987653
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-182 Score=1833.29 Aligned_cols=1257 Identities=31% Similarity=0.521 Sum_probs=1023.8
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCCCCCccchhhhcccchhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 000755 7 FLLKPAFLRGISGSLHLVLLLGLFVSWVWK-KLRVGVSDSEGYKERFKKKSVLRHKLILFCCFAVSVFNLVLCLLDYFSW 85 (1300)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (1300)
|-||+++.+..++..++++++.....+... +. +.. ..............+.++|+....+++...+... ..+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 101 (1495)
T PLN03232 29 YTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNA-KAQ-----IYVLRKKYYNCVLGILACYCVVEPVLRLVMGISL-FDM 101 (1495)
T ss_pred CCccHHhhHHHHHHHHHHHHHHHHHHHHHhhcc-ccC-----CccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcc
Confidence 679999988777777774444433333221 11 111 0000111111233444555555444443333222 222
Q ss_pred cCC-CCCcchhhHHHHHHHHHHHHHHHHHHHhhccccCCccccchhHHHHHHHH---HHhhhhhhhhhh-hhhhccccch
Q 000755 86 FGN-DWSGDKLVTLADLVLRTLGWGAICVYLHSQFFNSGQQRFPLLLRLWWGFY---LCLSCYCLVSDI-VLYAQHVSLS 160 (1300)
Q Consensus 86 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~ 160 (1300)
.+. .+.......+...++..++++++......++. ... .+++.+++||++. .++.+. ... ...... ...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ 175 (1495)
T PLN03232 102 DEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYV-KEF-RWYVRFGVVYVLVADAVLLDLV---LPLKNSINRT-ALY 175 (1495)
T ss_pred ccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHH-hcC-CCCceeeehhHhhhhHHHHHHH---HHHHHHHhcc-ccc
Confidence 221 22222333244455555666655553323332 222 4588999999887 555444 222 222220 011
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhccccCCCccccccccccCCCCCCCCCccccccCCCCCCCCCCccCchhHHHHHHhHHH
Q 000755 161 VHYLVSDVVSVISGFVFCYVGFLKRDKGEDTLLLQETLLDGDSSIGNGEVSSIKSRGTDNVTPYSNASLFSVLTFSWMGS 240 (1300)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~p 240 (1300)
......++.+..+++. +..+...++.........+..+ + .+.+..|.+...+||++||+|||+||+|++|
T Consensus 176 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~pe~~a~~~s~~~f~w~~p 245 (1495)
T PLN03232 176 -LCISSRCCQALFGILL-LVYIPELDPYPGYHILNNESLD-N-------VEYDALRGGENICPERYASIFSRIYFSWMTP 245 (1495)
T ss_pred -eehhHHHHHHHHHHHH-HHhcccCCCCCccccccccccc-c-------cccccccccCCCCccccCCHHHHHHHHHHHH
Confidence 1122222232222222 1111111110000000000000 0 0112234456789999999999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhhhcCCCccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000755 241 LISLGNKKTLDLEDVPQLDSGDSVVGCFPIFRNKLEANRVEGNKVTAFKLTKALFFSAWKEIVFTAILALLYTLANYVGP 320 (1300)
Q Consensus 241 l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P 320 (1300)
++++||+++|+.+|||+|+++|+++.++++|++.|+++. +.++++++++++++|++.++.++++.++.+++.+++|
T Consensus 246 l~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P 321 (1495)
T PLN03232 246 LMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES----RRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVGP 321 (1495)
T ss_pred HHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh----ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998764 2245789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHH
Q 000755 321 YLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEI 400 (1300)
Q Consensus 321 ~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~I 400 (1300)
++++.+++++++.+. ...++.++++++++.++.+++.+++.+...+++.++|..++..+|+|.++++...++++++|++
T Consensus 322 ~ll~~li~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i 400 (1495)
T PLN03232 322 VILSHLLQSMQEGDP-AWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKV 400 (1495)
T ss_pred HHHHHHHHHHhcCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHH
Confidence 999999999975432 3357778888888888888888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 401 INFMTVDAERIGDFGWYMHDPWLVILQVSLALLILYKNLGLASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMK 480 (1300)
Q Consensus 401 vnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~ 480 (1300)
+|+|++|++++.+++..+|.+|..|++++++++++|..+|++++++++++++++|++.+++++.++.+++.++.+|+|.+
T Consensus 401 ~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~ 480 (1495)
T PLN03232 401 TNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVG 480 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888888888888999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Q 000755 481 VTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSA 560 (1300)
Q Consensus 481 ~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~ 560 (1300)
.++|+++|||+||+|+||+.+.+++++.|++|.+..++.........++....|.++.+++|++|.+.++++|++.+|++
T Consensus 481 ~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~ 560 (1495)
T PLN03232 481 IINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTS 560 (1495)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999998887777766666677888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcceEEEEeEEEEecCCCCCCceeccee
Q 000755 561 LATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINL 640 (1300)
Q Consensus 561 lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l 640 (1300)
+++++.+..|+..+|..+..+.++++|++||++|++.++....... +.......|+++|++|+|+...++++|+|+||
T Consensus 561 l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~--~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl 638 (1495)
T PLN03232 561 LSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNP--PLQPGAPAISIKNGYFSWDSKTSKPTLSDINL 638 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccC--CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEE
Confidence 9999999999999999999999999999999999987653221111 11112346999999999985445789999999
Q ss_pred EEeCCcEEEEEcCCCCChHHHHHHHhccccCCccE-EEEcCeEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhc
Q 000755 641 KVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGT-LKLCGTKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACS 719 (1300)
Q Consensus 641 ~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~-i~~~g~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~ 719 (1300)
+|++|++++|+|++|||||||+++|+|+++|++|. +.+.+.++||+|+||+|++||||||+||+++++++|++++++|+
T Consensus 639 ~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~ 718 (1495)
T PLN03232 639 EIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTA 718 (1495)
T ss_pred EEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999974 56789999999999999999999999999999999999999999
Q ss_pred chHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEec
Q 000755 720 LKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTH 799 (1300)
Q Consensus 720 l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH 799 (1300)
|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.++++|+|+|||
T Consensus 719 L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH 798 (1495)
T PLN03232 719 LQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTN 798 (1495)
T ss_pred CHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred CCCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHHHHHHHHHhhhh------cccCC-----------CC--ccccc
Q 000755 800 QVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVLVGAHQQALSAL------DSIEG-----------GP--VSERI 860 (1300)
Q Consensus 800 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~------~~~~~-----------~~--~~~~~ 860 (1300)
+++.++.||+|++|++|+|++.|+|+|+++.++.|..+...+....+.. +.... .. ...+.
T Consensus 799 ~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1495)
T PLN03232 799 QLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQG 878 (1495)
T ss_pred ChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999988877877764432100000 00000 00 00000
Q ss_pred cccc--cCCCccccccc---------------------------------------------------------------
Q 000755 861 SMNK--ENGGMDTTNGV--------------------------------------------------------------- 875 (1300)
Q Consensus 861 ~~~~--~~~~e~~~~g~--------------------------------------------------------------- 875 (1300)
+..+ ..++|+++.|.
T Consensus 879 ~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~ 958 (1495)
T PLN03232 879 KRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYSPGFYIVVYAL 958 (1495)
T ss_pred ccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHH
Confidence 0000 00011111111
Q ss_pred --------------------------------------------cccCcc--ccccccc--h------------------
Q 000755 876 --------------------------------------------TMKEGN--EDIQTDK--V------------------ 889 (1300)
Q Consensus 876 --------------------------------------------~lp~gr--nr~s~D~--v------------------ 889 (1300)
+.|.|+ ||+++|+ +
T Consensus 959 l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~ 1038 (1495)
T PLN03232 959 LGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQL 1038 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 118899 9999998 3
Q ss_pred ---------------------------hhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHH
Q 000755 890 ---------------------------DEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKL 942 (1300)
Q Consensus 890 ---------------------------~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~ 942 (1300)
.+.+|.+++|+++|.+..+++|+++++.|+++|+.|||+|+++++|.+++.+.
T Consensus 1039 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~ 1118 (1495)
T PLN03232 1039 LSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKS 1118 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999
Q ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 943 VDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVI-----EPAIAGLAVTYGLNLNMLQAWVIWNLCNLE 1017 (1300)
Q Consensus 943 ~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~-----~~~~~gl~l~~~~~~~~~~~~~~~~~~~le 1017 (1300)
.|.+.+..+.....+.|+..++++++.+++.+...+.+. ..+.+ .++.+|++++|+..+..++.++++.+.++|
T Consensus 1119 ~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~ 1197 (1495)
T PLN03232 1119 MDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVL-RNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAE 1197 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888899999999988876655444333322 22322 256788899999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHH
Q 000755 1018 NKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKST 1097 (1300)
Q Consensus 1018 ~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKST 1097 (1300)
+.++|+||+.+|.+.|+|++...+...+++.||..|.|+|+||+++|+++.++||+|+||+|++||++||||||||||||
T Consensus 1198 ~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKST 1277 (1495)
T PLN03232 1198 NSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSS 1277 (1495)
T ss_pred HHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHH
Confidence 99999999999999888765322333456679999999999999999877778999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhh
Q 000755 1098 LIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNK 1177 (1300)
Q Consensus 1098 Ll~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~ 1177 (1300)
|+++|+|+++|++|+|.|||+|+++++++++|++|++|||||.+|+||||+||+|..+++|+|+|++++++++++++.++
T Consensus 1278 L~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~l 1357 (1495)
T PLN03232 1278 MLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRN 1357 (1495)
T ss_pred HHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred cCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccC
Q 000755 1178 EGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSD 1257 (1300)
Q Consensus 1178 ~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D 1257 (1300)
|+||||.++|+|.|||||||||+||||||+++|+|||||||||+||++|++.|++.|++.+++||||+||||++++.+||
T Consensus 1358 p~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~D 1437 (1495)
T PLN03232 1358 PFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCD 1437 (1495)
T ss_pred cCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHhhh
Q 000755 1258 MVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQR 1294 (1300)
Q Consensus 1258 ~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~~~ 1294 (1300)
||+||++|+|+|+|+|++|+++++|.|++|+++....
T Consensus 1438 rIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1438 KILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred EEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 9999999999999999999988778999999987653
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.9e-179 Score=1799.01 Aligned_cols=1069 Identities=38% Similarity=0.654 Sum_probs=955.5
Q ss_pred CCCCCccCchhHHHHHHhHHHHHHhcccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhhhc-----------------
Q 000755 220 NVTPYSNASLFSVLTFSWMGSLISLGNKKTLDLEDVPQLDSGDSVVGCFPIFRNKLEANRVEG----------------- 282 (1300)
Q Consensus 220 ~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~----------------- 282 (1300)
..+||++||+|||++|||+||++++||+++|+.+|||+++++++++.++++|++.|+++..+.
T Consensus 200 ~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1522)
T TIGR00957 200 NPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKP 279 (1522)
T ss_pred CCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhcccccccccccccccccc
Confidence 357999999999999999999999999999999999999999999999999999998752100
Q ss_pred --------------------CCCccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHH
Q 000755 283 --------------------NKVTAFKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYV 342 (1300)
Q Consensus 283 --------------------~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~ 342 (1300)
++.++++++++++++||+.++..+++.++..++.+++|++++.+++++.+.......||+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~ 359 (1522)
T TIGR00957 280 KGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYF 359 (1522)
T ss_pred cccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHH
Confidence 112347899999999999999999999999999999999999999998765433446888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000755 343 LVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPW 422 (1300)
Q Consensus 343 l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~ 422 (1300)
++++++++.++.+++.++|.+...++++++|..|+..||+|+++++...+++.++|+++|+|++|++++.++..++|.+|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~ 439 (1522)
T TIGR00957 360 YTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIW 439 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHH
Q 000755 423 LVILQVSLALLILYKNLGLASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFL 502 (1300)
Q Consensus 423 ~~~l~i~~~l~lL~~~lg~~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~ 502 (1300)
..|++++++++++|..+|+++++++++++++++++..++++.++.++++++.+|+|++.++|+++|||+||+|+||+.|.
T Consensus 440 ~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~ 519 (1522)
T TIGR00957 440 SAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFL 519 (1522)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 503 SKIIELRKIEAGWLKKFLYTGAMTSFVFWGAPTFVSVATFGACMLL--GIPLESGKILSALATFRILQEPIYNLPDTISM 580 (1300)
Q Consensus 503 ~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~--~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~ 580 (1300)
+++++.|++|.+..++..+......+..+..|.++.+++|++|.+. ++.++++.+|+++++++.+..|+..+|..+..
T Consensus 520 ~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~ 599 (1522)
T TIGR00957 520 DKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISS 599 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888777777777778888888899988776 46799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccccCCCC-CCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChH
Q 000755 581 IIQTKVSLDRIASFLCLDDLQSDVVEKHPR-GSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKS 659 (1300)
Q Consensus 581 ~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~-~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKS 659 (1300)
+.++++|++||++|++.++.++...+.... ......|+++|++|+|+. .++++|+|+||+|++|++++|+|+||||||
T Consensus 600 ~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~l~~isl~i~~G~~v~IvG~~GsGKS 678 (1522)
T TIGR00957 600 IVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWAR-DLPPTLNGITFSIPEGALVAVVGQVGCGKS 678 (1522)
T ss_pred HHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCC-CCCceeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 999999999999999876543321111111 111236999999999973 246799999999999999999999999999
Q ss_pred HHHHHHhccccCCccEEEEcCeEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000755 660 SLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERG 739 (1300)
Q Consensus 660 TLl~~llG~~~~~~G~i~~~g~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g 739 (1300)
||+++|+|+++|++|+|.++|.++||+|+||++++||+|||.||.++++++|++++++|++.+|++.+|+||+|.+||+|
T Consensus 679 TLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g 758 (1522)
T TIGR00957 679 SLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKG 758 (1522)
T ss_pred HHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH--HhhcCCcEEEEEecCCCccccCCEEEEEeCCe
Q 000755 740 INLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVL--LGLLRSKTVIYVTHQVEFLPAADLILVMKDGK 817 (1300)
Q Consensus 740 ~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~--~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~ 817 (1300)
.+|||||||||+||||+|++|+|||||||||+||+++++++++.++ .+.++++|+|+|||+++.++.||+|++|++|+
T Consensus 759 ~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~ 838 (1522)
T TIGR00957 759 VNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGK 838 (1522)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCe
Confidence 9999999999999999999999999999999999999999998876 34667899999999999999999999999999
Q ss_pred EEEecChHHHHhcCchHHHHHHHHHHHhhh---h---------cccC---------------C----------C---C--
Q 000755 818 ITQAGKYNDILNSGTDFMVLVGAHQQALSA---L---------DSIE---------------G----------G---P-- 855 (1300)
Q Consensus 818 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~---~---------~~~~---------------~----------~---~-- 855 (1300)
|++.|+++++.+..+.|..+...+...... . +..+ + . .
T Consensus 839 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1522)
T TIGR00957 839 ISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQS 918 (1522)
T ss_pred EEeeCCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence 999999999998777776665422110000 0 0000 0 0 0
Q ss_pred ----cc---cccccc---cc-CCCccccccc-------------------------------------------------
Q 000755 856 ----VS---ERISMN---KE-NGGMDTTNGV------------------------------------------------- 875 (1300)
Q Consensus 856 ----~~---~~~~~~---~~-~~~e~~~~g~------------------------------------------------- 875 (1300)
.. ...+.. .+ .++|+++.|.
T Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~ 998 (1522)
T TIGR00957 919 RHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVN 998 (1522)
T ss_pred ccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 00 000000 00 0011111121
Q ss_pred -----------------------------------------------------------cccCcc--ccccccc--h---
Q 000755 876 -----------------------------------------------------------TMKEGN--EDIQTDK--V--- 889 (1300)
Q Consensus 876 -----------------------------------------------------------~lp~gr--nr~s~D~--v--- 889 (1300)
..|.|+ |||++|+ +
T Consensus 999 ~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~ 1078 (1522)
T TIGR00957 999 GTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSM 1078 (1522)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHH
Confidence 118899 9999998 2
Q ss_pred ------------------------------------------hhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHH
Q 000755 890 ------------------------------------------DEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIR 927 (1300)
Q Consensus 890 ------------------------------------------~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIr 927 (1300)
++++|.+++|+++|++..+++|+++++.|+++|+.|||
T Consensus 1079 l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIr 1158 (1522)
T TIGR00957 1079 IPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIR 1158 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHH
Confidence 57889999999999999999999999999999999999
Q ss_pred HhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHH
Q 000755 928 SFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQA 1007 (1300)
Q Consensus 928 af~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~ 1007 (1300)
+|+++++|.+++.+..|.++++.+.....++|+..++++++.+++.++..+.+ ...|.+++|.+|++++|+..+..++.
T Consensus 1159 af~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~~l~ 1237 (1522)
T TIGR00957 1159 AFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTFYLN 1237 (1522)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987765444433332 33577899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEE
Q 000755 1008 WVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGI 1087 (1300)
Q Consensus 1008 ~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgI 1087 (1300)
++++.+.++|+.++|+||+.+|.+.|+|++...+...++..||..|.|+|+||+++|+++.++||+|+||+|++||++||
T Consensus 1238 ~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaI 1317 (1522)
T TIGR00957 1238 WLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGI 1317 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEE
Confidence 99999999999999999999999988776533333445668999999999999999987767899999999999999999
Q ss_pred ECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHH
Q 000755 1088 VGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDK 1167 (1300)
Q Consensus 1088 vG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~ 1167 (1300)
|||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||++|+||||+||+|+++++|+++|+++++
T Consensus 1318 VGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~ 1397 (1522)
T TIGR00957 1318 VGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALEL 1397 (1522)
T ss_pred ECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEe
Q 000755 1168 CQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIA 1247 (1300)
Q Consensus 1168 ~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~ia 1247 (1300)
+++++++.++|+||||.|+|+|.|||||||||+||||||+++|+|||||||||+||.+|++.|+++|++.+++||||+||
T Consensus 1398 a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IA 1477 (1522)
T TIGR00957 1398 AHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIA 1477 (1522)
T ss_pred cCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHH
Q 000755 1248 HRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1248 Hrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~ 1291 (1300)
||++++.+||||+||++|+|+|+|+|++|+++ +|.|++|+++.
T Consensus 1478 HRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1478 HRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred cCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 99999999999999999999999999999986 69999999884
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.1e-170 Score=1709.50 Aligned_cols=1061 Identities=29% Similarity=0.491 Sum_probs=941.9
Q ss_pred CCCCccCchhHHHHHHhHHHHHHhcccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhhhcCCCccchhHHHHHHHhHH
Q 000755 221 VTPYSNASLFSVLTFSWMGSLISLGNKKTLDLEDVPQLDSGDSVVGCFPIFRNKLEANRVEGNKVTAFKLTKALFFSAWK 300 (1300)
Q Consensus 221 ~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 300 (1300)
.+||++||+|||++|||++|++++||+++|+.+|||+|+++++++.++++|++.|+++. . ++.+.++++++++++|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~~~L~~~l~~~~~~ 80 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDREL-A-SAKKNPKLLNALRRCFFW 80 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHH-h-ccCCCChHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999998754 1 123457899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 301 EIVFTAILALLYTLANYVGPYLIDTFVQYLNGERE-FKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSM 379 (1300)
Q Consensus 301 ~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~-~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~ 379 (1300)
.+++.+++.++.+++.+++|++++.+|++++.... ....+|.++++++++.++.+++.+++.|...++++++|.+|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~ 160 (1490)
T TIGR01271 81 RFVFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSL 160 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999854322 22357888889999999999999999999999999999999999
Q ss_pred HHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 380 VYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPWLVILQVSLALLILYKNLGLASIAALFATVLIMLTNFP 459 (1300)
Q Consensus 380 Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~l~~~~~~~ 459 (1300)
||+|+++++...+++.++|+++|+|++|++++.+++.++|.+|..|++++++++++|..+|+++++++++++++++++.+
T Consensus 161 iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 161 IYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 460 LGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWGAPTFVSV 539 (1300)
Q Consensus 460 ~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~ 539 (1300)
++++..++++++|+.+|+|++.++|+++|||+||+|+||+.|.+++++.|+.|++..++..+......++++..|.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888877777788888999999
Q ss_pred HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcceEE
Q 000755 540 ATFGACMLLGIPLESGKILSALATFRILQEPIY-NLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSETAIE 618 (1300)
Q Consensus 540 ~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~-~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~ 618 (1300)
++|++|.+.++ ++++.+|+++++++++..|+. .+|..+..+.++.+|++||++||..+|.+.... ......++
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~-----~~~~~~i~ 394 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY-----NLTTTEVE 394 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc-----cCCCCceE
Confidence 99999887754 789999999999999999985 799999999999999999999998776543211 01123699
Q ss_pred EEeEEEEecCC-------------------------------CCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhc
Q 000755 619 IVDGNFAWDIS-------------------------------SNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILG 667 (1300)
Q Consensus 619 i~~~~fs~~~~-------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG 667 (1300)
++|++|+|+.. ..+++|+|+||+|++|++++|+|||||||||||++|+|
T Consensus 395 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G 474 (1490)
T TIGR01271 395 MVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMG 474 (1490)
T ss_pred EecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999999631 01468999999999999999999999999999999999
Q ss_pred cccCCccEEEEcCeEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 668 EVPKISGTLKLCGTKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 668 ~~~~~~G~i~~~g~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
+++|++|+|.++|.++||+|+||++++||+|||+||.++++++|++++++|+|.+|++.+|.||+|.+|++|.+||||||
T Consensus 475 ~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqk 554 (1490)
T TIGR01271 475 ELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQR 554 (1490)
T ss_pred CCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 827 (1300)
|||+||||+|++|+||||||||||||+++++++++.|+.+.++++|+|+|||+++.++.||+|++|++|+|++.|+++++
T Consensus 555 qRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l 634 (1490)
T TIGR01271 555 ARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSEL 634 (1490)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999999999999888877789999999999999999999999999999999999999
Q ss_pred HhcCchHHHHHHHHH-----------------------H-------------------Hhh-------------------
Q 000755 828 LNSGTDFMVLVGAHQ-----------------------Q-------------------ALS------------------- 846 (1300)
Q Consensus 828 ~~~~~~~~~l~~~~~-----------------------~-------------------~~~------------------- 846 (1300)
...+..|........ . ..+
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1490)
T TIGR01271 635 QAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARK 714 (1490)
T ss_pred HhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 865444433221000 0 000
Q ss_pred ----------------h--hc----------cc---------------------------------C-------------
Q 000755 847 ----------------A--LD----------SI---------------------------------E------------- 852 (1300)
Q Consensus 847 ----------------~--~~----------~~---------------------------------~------------- 852 (1300)
. .. +. .
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1490)
T TIGR01271 715 FSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQT 794 (1490)
T ss_pred cccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccc
Confidence 0 00 00 0
Q ss_pred -------------------------CCCc----------c---------cccc--ccc----------------------
Q 000755 853 -------------------------GGPV----------S---------ERIS--MNK---------------------- 864 (1300)
Q Consensus 853 -------------------------~~~~----------~---------~~~~--~~~---------------------- 864 (1300)
..+. . ++.. ...
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~ 874 (1490)
T TIGR01271 795 SFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCL 874 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHH
Confidence 0000 0 0000 000
Q ss_pred ------------------cCCC-------ccc---------------cccc-----------------------------
Q 000755 865 ------------------ENGG-------MDT---------------TNGV----------------------------- 875 (1300)
Q Consensus 865 ------------------~~~~-------e~~---------------~~g~----------------------------- 875 (1300)
...+ ... ..+.
T Consensus 875 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1490)
T TIGR01271 875 VIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLL 954 (1490)
T ss_pred HHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 0000
Q ss_pred -----------------------cccCcc--ccccccc--h---------------------------------------
Q 000755 876 -----------------------TMKEGN--EDIQTDK--V--------------------------------------- 889 (1300)
Q Consensus 876 -----------------------~lp~gr--nr~s~D~--v--------------------------------------- 889 (1300)
+.|.|+ |||++|+ +
T Consensus 955 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l 1034 (1490)
T TIGR01271 955 TVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPV 1034 (1490)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 118899 9999998 3
Q ss_pred ------hhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 000755 890 ------DEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFR 963 (1300)
Q Consensus 890 ------~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~ 963 (1300)
++.+|.+++|+++|++..+++|+++|+.|+++|+.|||+|+++++|.+++.+..+.+.+..+.....++|+..+
T Consensus 1035 ~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 1114 (1490)
T TIGR01271 1035 AVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMR 1114 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccc--
Q 000755 964 LDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIE-- 1041 (1300)
Q Consensus 964 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~-- 1041 (1300)
+++++.+.+..++++.+. ...++++.+|++++|++.+...+.++++.+.++|+.+.|+||+.+|.+.|+|++...+
T Consensus 1115 ~~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~ 1192 (1490)
T TIGR01271 1115 IDIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGG 1192 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc
Confidence 999876654433333222 2235678899999999999999999999999999999999999999988877542111
Q ss_pred ------------cCCCCCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC
Q 000755 1042 ------------ESRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT 1109 (1300)
Q Consensus 1042 ------------~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~ 1109 (1300)
...+++.||..|.|+|+||+++|+++.+++|+|+||+|++||++|||||||||||||+++|+|+++ .
T Consensus 1193 ~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~ 1271 (1490)
T TIGR01271 1193 GKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-T 1271 (1490)
T ss_pred cccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C
Confidence 123455799999999999999998877889999999999999999999999999999999999997 7
Q ss_pred cceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCC
Q 000755 1110 AGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENG 1189 (1300)
Q Consensus 1110 ~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G 1189 (1300)
+|+|.|||+|+++++++++|++|+||||||++|+||||+||+|+.+++|+++|++|+++++++++.++|+||||+|+|+|
T Consensus 1272 ~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G 1351 (1490)
T TIGR01271 1272 EGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGG 1351 (1490)
T ss_pred CcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEE
Q 000755 1190 ENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1190 ~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e 1269 (1300)
.|||||||||+||||||+++|+|||||||||+||.+|++.|++.|++.+++||||+||||++++.+||||+||++|+|+|
T Consensus 1352 ~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE 1431 (1490)
T TIGR01271 1352 YVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQ 1431 (1490)
T ss_pred CcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhhHHhcCCChHHHHHHHHhh
Q 000755 1270 YDSPTKLLENKSSSFAQLVAEYTQ 1293 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f~~l~~~~~~ 1293 (1300)
+|+|++|++ ++|.|++|+++...
T Consensus 1432 ~g~p~~Ll~-~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1432 YDSIQKLLN-ETSLFKQAMSAADR 1454 (1490)
T ss_pred eCCHHHHHc-CCcHHHHHHHHhCh
Confidence 999999996 58999999997764
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.1e-161 Score=1626.51 Aligned_cols=1075 Identities=31% Similarity=0.504 Sum_probs=935.8
Q ss_pred CCCCCCccCchhHHHHHHhHHHHHHhcccCCCCCCCCCCCCCCCchhhHHHHHHHH----------HHHhhhh-------
Q 000755 219 DNVTPYSNASLFSVLTFSWMGSLISLGNKKTLDLEDVPQLDSGDSVVGCFPIFRNK----------LEANRVE------- 281 (1300)
Q Consensus 219 ~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~----------~~~~~~~------- 281 (1300)
....||+++|||.++++.|++|++.+..|..|+++|+|+...+.|+-++.-++.+. |+...+.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1560)
T PTZ00243 57 YTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLD 136 (1560)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecc
Confidence 45678999999999999999999999999999999999999999886665544433 3311000
Q ss_pred --------------------------------------------------------------------------c-----
Q 000755 282 --------------------------------------------------------------------------G----- 282 (1300)
Q Consensus 282 --------------------------------------------------------------------------~----- 282 (1300)
.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1560)
T PTZ00243 137 ASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSS 216 (1560)
T ss_pred ccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecc
Confidence 0
Q ss_pred ----------CCCccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHH
Q 000755 283 ----------NKVTAFKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKI 352 (1300)
Q Consensus 283 ----------~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~ 352 (1300)
..++..++++++++++|+.++..++++++.+++.+++|++++.+++++++.......+++++++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~ 296 (1560)
T PTZ00243 217 TGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQL 296 (1560)
T ss_pred cccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Confidence 0022347999999999999999999999999999999999999999996544333457788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhc--CCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000755 353 VECLAQRHWMFRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQ--SYTSGEIINFMTVDAERIGDFGWYMHDPWLVILQVSL 430 (1300)
Q Consensus 353 ~~~l~~~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~--~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~ 430 (1300)
+++++.+++++...+.+.++|.+|...+|+|+++++..+.. +.++|+++|+|++|++++.+++.++|.+|..|+++++
T Consensus 297 ~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~ 376 (1560)
T PTZ00243 297 IQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLL 376 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987765 5689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHH
Q 000755 431 ALLILYKNLGLASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRK 510 (1300)
Q Consensus 431 ~l~lL~~~lg~~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~ 510 (1300)
++++||..+|+++++|+++++++++++.+++|++.++++++|+.+|+|++.++|+++|||+||+++||+.|.+++++.|+
T Consensus 377 ~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~ 456 (1560)
T PTZ00243 377 SILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRA 456 (1560)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 511 IEAGWLKKFLYTGAMTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDR 590 (1300)
Q Consensus 511 ~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~R 590 (1300)
+|++.+++..+...+..++.+.+|.++.+++|++|.+.|++||++.+|+++++|+++..|+..+|..++.+.++.+|++|
T Consensus 457 ~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~R 536 (1560)
T PTZ00243 457 RELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKR 536 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcccc----c-----------------------------CCC-------------------------CCC
Q 000755 591 IASFLCLDDLQSDVV----E-----------------------------KHP-------------------------RGS 612 (1300)
Q Consensus 591 I~~fL~~~e~~~~~~----~-----------------------------~~~-------------------------~~~ 612 (1300)
|++||..+|...... + ..+ ...
T Consensus 537 I~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1560)
T PTZ00243 537 ISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRH 616 (1560)
T ss_pred HHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccc
Confidence 999998765211000 0 000 000
Q ss_pred CcceEEEEeEEEEecCC-------------------------------------CCCCceecceeEEeCCcEEEEEcCCC
Q 000755 613 SETAIEIVDGNFAWDIS-------------------------------------SNNPTLRDINLKVFHGMRVAVCGTVG 655 (1300)
Q Consensus 613 ~~~~I~i~~~~fs~~~~-------------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~G 655 (1300)
....+.++|++|+|+.. .++++|+|+||+|++|++++|+|+||
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nG 696 (1560)
T PTZ00243 617 PSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATG 696 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCC
Confidence 11246677777765410 13468999999999999999999999
Q ss_pred CChHHHHHHHhccccCCccEEEEcCeEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccc
Q 000755 656 SGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVI 735 (1300)
Q Consensus 656 sGKSTLl~~llG~~~~~~G~i~~~g~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~i 735 (1300)
||||||+++|+|+++|++|+|.+++.++||+|+||++++||+|||.|+.++++++|++++++|++++|++.+|+|++|.+
T Consensus 697 sGKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i 776 (1560)
T PTZ00243 697 SGKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEI 776 (1560)
T ss_pred CcHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHh
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeC
Q 000755 736 GERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKD 815 (1300)
Q Consensus 736 ge~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~ 815 (1300)
|++|.+|||||||||+||||+|++|+|||||||||+||++++++++++++.+.++++|+|+|||+++.++.||+|++|++
T Consensus 777 ~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 777 GEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999888777789999999999999999999999999
Q ss_pred CeEEEecChHHHHhcCchHHHHHHHHHHHhh--h--h--c--ccCC---------CC--cccc--ccc---c-----cc-
Q 000755 816 GKITQAGKYNDILNSGTDFMVLVGAHQQALS--A--L--D--SIEG---------GP--VSER--ISM---N-----KE- 865 (1300)
Q Consensus 816 G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~--~--~--~--~~~~---------~~--~~~~--~~~---~-----~~- 865 (1300)
|++++.|+++++++.+ .+..+........+ . . + ..+. .+ .... ... . .+
T Consensus 857 G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhCh-HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 9999999999998753 35544432111000 0 0 0 0000 00 0000 000 0 00
Q ss_pred CCCccccccc----------------------------------------------------------------------
Q 000755 866 NGGMDTTNGV---------------------------------------------------------------------- 875 (1300)
Q Consensus 866 ~~~e~~~~g~---------------------------------------------------------------------- 875 (1300)
..+|++..|.
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~l~~y~~~~~~~~~~~ 1015 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFKLSAATYLYVYLGIVLLGTFSV 1015 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccHHHHHHHHHHHHHHHH
Confidence 1112222221
Q ss_pred -----------------------------------cccCcc--ccccccc--h---------------------------
Q 000755 876 -----------------------------------TMKEGN--EDIQTDK--V--------------------------- 889 (1300)
Q Consensus 876 -----------------------------------~lp~gr--nr~s~D~--v--------------------------- 889 (1300)
+.|.|+ |||++|+ +
T Consensus 1016 ~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~ 1095 (1560)
T PTZ00243 1016 PLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSA 1095 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 118899 9999999 3
Q ss_pred ------------------hhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHH
Q 000755 890 ------------------DEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKF 951 (1300)
Q Consensus 890 ------------------~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~ 951 (1300)
+..+|.+..|+++|+...+++|++++++|+++|+.|||+|++++.|.+++.+..|.+.+..+
T Consensus 1096 ~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~ 1175 (1560)
T PTZ00243 1096 SQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSY 1175 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 952 HIAGAMEWLCFRLDMLSSLTFAFSLVLLI---SIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQ 1028 (1300)
Q Consensus 952 ~~~~~~~wl~~~l~~~~~~~~~~~~~~~~---~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~ 1028 (1300)
.....++|+..+++++..+++++++++.+ ....+.+++|.++++++|+..+..++.++++.+.++|+.+.|+||+.+
T Consensus 1176 ~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~ 1255 (1560)
T PTZ00243 1176 LENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLY 1255 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988776544433322 223455789999999999999999999999999999999999999999
Q ss_pred hhc-CCCCCCCc-----------------------cccCCCC---CCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeC
Q 000755 1029 YTC-ISSEPPLV-----------------------IEESRPD---CSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPG 1081 (1300)
Q Consensus 1029 ~~~-~~~e~~~~-----------------------~~~~~~~---~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~ 1081 (1300)
|++ .|+|+... .+...++ +.||..|.|+|+||+++|+++.+++|+||||+|++
T Consensus 1256 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~ 1335 (1560)
T PTZ00243 1256 YTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRIAP 1335 (1560)
T ss_pred HHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEECC
Confidence 996 44432110 0011122 23556789999999999988777899999999999
Q ss_pred CcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCCCCCCHHHH
Q 000755 1082 GMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYKDEEI 1161 (1300)
Q Consensus 1082 Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i 1161 (1300)
||+||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||++|+||||+||+|+.+++|+++
T Consensus 1336 GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI 1415 (1560)
T PTZ00243 1336 REKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEV 1415 (1560)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC-CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCC
Q 000755 1162 WEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK-SKVLVLDEATASVDTATDNLIQQTLRQHFSD 1240 (1300)
Q Consensus 1162 ~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~-~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~ 1240 (1300)
|+|++++++++++.++|+||||.|+|+|.|||||||||+||||||+++ |+|||||||||+||++|++.|+++|++.+++
T Consensus 1416 ~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~ 1495 (1560)
T PTZ00243 1416 WAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFSA 1495 (1560)
T ss_pred HHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999999999999999999999999999996 8999999999999999999999999999999
Q ss_pred cEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHhhh
Q 000755 1241 CTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQR 1294 (1300)
Q Consensus 1241 ~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~~~ 1294 (1300)
+|||+||||++++.+||+|+||++|+|+|+|+|++|+++++|.|++|+++....
T Consensus 1496 ~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1549 (1560)
T PTZ00243 1496 YTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRS 1549 (1560)
T ss_pred CEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 999999999999999999999999999999999999987789999999887643
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-128 Score=1206.64 Aligned_cols=923 Identities=23% Similarity=0.292 Sum_probs=712.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHH
Q 000755 359 RHWMFRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLILYK 437 (1300)
Q Consensus 359 ~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~lL~~ 437 (1300)
..|.+...|...++|. ...+..||.....++.+.+|++++.|+.|++++.+.+.. +-.+......++..+++-+.
T Consensus 93 ~c~~~~geRq~~riR~----~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~ 168 (1228)
T KOG0055|consen 93 SCWMRTGERQTARIRS----KYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFY 168 (1228)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555 455566666778888888999999999999999987532 11111112222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Q 000755 438 NLGLASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLK 517 (1300)
Q Consensus 438 ~lg~~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~ 517 (1300)
.-...+++++.+.+++......+++.+.+...+.+++..+--+...|.+.++|++-.|+-|+...++..+.-+.-.+.-.
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 22234556666777777777788888888888888888888899999999999999999999888877654333333322
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000755 518 KFLYTGAMTSFV--FWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFL 595 (1300)
Q Consensus 518 ~~~~~~~~~~~~--~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL 595 (1300)
+......+.... ++........++||..++..+..++|.+++.+...-+-...+.+....+..+..+++|..+|.+.+
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 222222222211 223333445677887777778899999888776555566778888888999999999999999988
Q ss_pred cCCCCC-cccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCcc
Q 000755 596 CLDDLQ-SDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISG 674 (1300)
Q Consensus 596 ~~~e~~-~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 674 (1300)
+..+.. .............+.|+++|+.|+||..++.++|+|+||+|++|+.+|+||+|||||||++++|.|+|+|++|
T Consensus 329 ~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G 408 (1228)
T KOG0055|consen 329 DRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSG 408 (1228)
T ss_pred cCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCc
Confidence 654332 2211222233456789999999999987778999999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000755 675 TLKLCG-------------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGI 740 (1300)
Q Consensus 675 ~i~~~g-------------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~ 740 (1300)
+|.++| +++.|.|+|.+|++||+|||.||+| .+.++..++++.+...+++..+|+|++|.+||+|.
T Consensus 409 ~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~ 488 (1228)
T KOG0055|consen 409 EVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGV 488 (1228)
T ss_pred eEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCC
Confidence 999998 3699999999999999999999997 58899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEE
Q 000755 741 NLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQ 820 (1300)
Q Consensus 741 ~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~ 820 (1300)
.|||||||||||||||.+||+||||||||||||++.++.+ ++++....+|+|.|+|+||++.+++||+|++|++|+|+|
T Consensus 489 qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~V-q~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE 567 (1228)
T KOG0055|consen 489 QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVV-QEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVE 567 (1228)
T ss_pred CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHH-HHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999996655 788999999999999999999999999999999999999
Q ss_pred ecChHHHHhcCchHHHHHHHHHHHhhhhc--ccCCC----Ccc----------cccc-c--------ccc-----CCCcc
Q 000755 821 AGKYNDILNSGTDFMVLVGAHQQALSALD--SIEGG----PVS----------ERIS-M--------NKE-----NGGMD 870 (1300)
Q Consensus 821 ~g~~~~l~~~~~~~~~l~~~~~~~~~~~~--~~~~~----~~~----------~~~~-~--------~~~-----~~~e~ 870 (1300)
.|+|+||++.++.|.+++..++......+ ..++. ..+ .+.. . ..+ ..+++
T Consensus 568 ~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 647 (1228)
T KOG0055|consen 568 QGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEED 647 (1228)
T ss_pred ecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccccccccccccccccccc
Confidence 99999999999999999887653332110 00000 000 0000 0 000 00000
Q ss_pred ccccc---------------------------------------------------------------------------
Q 000755 871 TTNGV--------------------------------------------------------------------------- 875 (1300)
Q Consensus 871 ~~~g~--------------------------------------------------------------------------- 875 (1300)
...+-
T Consensus 648 ~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q 727 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQ 727 (1228)
T ss_pred ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000
Q ss_pred -------------cc--------------------cCcc--ccccccc--h-----------------------------
Q 000755 876 -------------TM--------------------KEGN--EDIQTDK--V----------------------------- 889 (1300)
Q Consensus 876 -------------~l--------------------p~gr--nr~s~D~--v----------------------------- 889 (1300)
++ -+|+ +|+++|. +
T Consensus 728 ~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~ 807 (1228)
T KOG0055|consen 728 HYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYG 807 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 1266 7888887 2
Q ss_pred ---------------hhhhh-hHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHH
Q 000755 890 ---------------DEQYY-IPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHI 953 (1300)
Q Consensus 890 ---------------~~~~y-~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~ 953 (1300)
+..|. ........+-.............|+++.++||++|+.|++|.+.+.+..+.-.+..+..
T Consensus 808 W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~ 887 (1228)
T KOG0055|consen 808 WRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKR 887 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00000011111111223446678999999999999999999999988887766555443
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000755 954 AGAMEWLCFRLDMLSS---LTFAFSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQY 1029 (1300)
Q Consensus 954 ~~~~~wl~~~l~~~~~---~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~ 1029 (1300)
. .|-++...+-.+ +..+++..+ ...+..|..++..+-..+.....-...+........+.-+...|+.++++.
T Consensus 888 ~---~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 888 G---LISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 3 233333222222 222333333 234567778877666555555555555666777778889999999999999
Q ss_pred hcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCC-CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC
Q 000755 1030 TCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHL-PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP 1108 (1300)
Q Consensus 1030 ~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~-~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p 1108 (1300)
++.+++-+...+.. ....+-+|+|+++||+|+|+... .+||+|+|++|++|+.+||||||||||||.+.+|-|+|+|
T Consensus 965 ~dr~~~i~~~~~~~--~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp 1042 (1228)
T KOG0055|consen 965 LDRKPTIDPDSTSG--GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDP 1042 (1228)
T ss_pred hcCCCCCCCCCCCC--CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 98765322111111 01113579999999999997432 3699999999999999999999999999999999999999
Q ss_pred CcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCcccccc
Q 000755 1109 TAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTE 1187 (1300)
Q Consensus 1109 ~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e 1187 (1300)
++|.|.|||.||.+++++.||++|++|.|||.||++|||||+.+. ...+.+|+.+|++.++.++||.++|+||||.|||
T Consensus 1043 ~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGe 1122 (1228)
T KOG0055|consen 1043 DAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGE 1122 (1228)
T ss_pred CCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCc
Confidence 999999999999999999999999999999999999999999987 4579999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEE
Q 000755 1188 NGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGII 1267 (1300)
Q Consensus 1188 ~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i 1267 (1300)
+|.+||||||||+|||||++|||+|||||||||+||.++++.+|++|++...++|.|+||||++|+.+||.|.|+++|+|
T Consensus 1123 rG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~V 1202 (1228)
T KOG0055|consen 1123 RGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKV 1202 (1228)
T ss_pred ccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecChhhHHhcCCChHHHHHHHHh
Q 000755 1268 EEYDSPTKLLENKSSSFAQLVAEYT 1292 (1300)
Q Consensus 1268 ~e~g~~~~l~~~~~~~f~~l~~~~~ 1292 (1300)
+|.|+|++|++ ++|.|++|++.+.
T Consensus 1203 vE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1203 VEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred EecccHHHHHh-CCCchHHHhhhcc
Confidence 99999999998 6899999998653
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.4e-121 Score=1222.08 Aligned_cols=997 Identities=19% Similarity=0.215 Sum_probs=750.7
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 288 FKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQV 367 (1300)
Q Consensus 288 ~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 367 (1300)
+.+++...+.+++.++++.+++++..++..+.|+++..+++.+..... ...+++.+++..++..++...+.+...+
T Consensus 48 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (1466)
T PTZ00265 48 FLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN----VNDIIFSLVLIGIFQFILSFISSFCMDV 123 (1466)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555556678888888999999999999999999999997642211 1112233333444455556666677788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000755 368 AGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLI-LYKNLGLASIA 445 (1300)
Q Consensus 368 ~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~l-L~~~lg~~~l~ 445 (1300)
++.++...++..+|+|.++++...+++.++|++++.++.|++.+.+.+. .+..+...++.++.++++ ++..+.++. +
T Consensus 124 ~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lal-v 202 (1466)
T PTZ00265 124 VTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTL-C 202 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-H
Confidence 8999999999999999999999999999999999999999999988653 344444444444444443 444555543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 446 ALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAM 525 (1300)
Q Consensus 446 ~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~ 525 (1300)
.++++++++++..++.++.++..++..+..++..+.+.|.++||++||.|+.|+.+.+++.+..+...+...+......+
T Consensus 203 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~ 282 (1466)
T PTZ00265 203 ITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESL 282 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555566677788888888888888889999999999999999999999999988865433333322222222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHhcC--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000755 526 TSFVFW--GAPTFVSVATFGACMLLGI--------PLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFL 595 (1300)
Q Consensus 526 ~~~~~~--~~p~~v~~~~f~~~~~~~~--------~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL 595 (1300)
...+.. .....+.++++|++.+..+ .+++|.+++++....+...++..+...+..+..+.+|.+||.+++
T Consensus 283 ~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii 362 (1466)
T PTZ00265 283 HIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEII 362 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1122344556777777653 578888887665554445556666667889999999999999999
Q ss_pred cCCCCCcccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccE
Q 000755 596 CLDDLQSDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGT 675 (1300)
Q Consensus 596 ~~~e~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~ 675 (1300)
+.++..+......... ....|+++|++|+|+...+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+
T Consensus 363 ~~~~~~~~~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~ 441 (1466)
T PTZ00265 363 NRKPLVENNDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGD 441 (1466)
T ss_pred cCCCCCCCCCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCe
Confidence 7654322111111111 123699999999997543457999999999999999999999999999999999999999999
Q ss_pred EEEc-C-------------eEEEEecCCcCCCCCHHHHHhcCCC------------------------------------
Q 000755 676 LKLC-G-------------TKAYVAQSPWIQSGNIEDNILFGKP------------------------------------ 705 (1300)
Q Consensus 676 i~~~-g-------------~~ayv~Q~~~l~~~Ti~eNI~fg~~------------------------------------ 705 (1300)
|.++ | .++||+|+|.+|++||+|||.+|.+
T Consensus 442 I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1466)
T PTZ00265 442 IIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGD 521 (1466)
T ss_pred EEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccch
Confidence 9994 3 2699999999999999999999741
Q ss_pred ----------------------CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEE
Q 000755 706 ----------------------MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIY 763 (1300)
Q Consensus 706 ----------------------~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~il 763 (1300)
.++++..++++.+++++++..+|+|++|.+|++|.+|||||||||+||||++++|+||
T Consensus 522 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~IL 601 (1466)
T PTZ00265 522 LNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKIL 601 (1466)
T ss_pred hhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 2456788899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCC-------------------------
Q 000755 764 LFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDG------------------------- 816 (1300)
Q Consensus 764 lLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G------------------------- 816 (1300)
|||||||+||++++..+.+ .+..+. +++|+|+||||++.+..||+|++|++|
T Consensus 602 lLDEpTSaLD~~se~~i~~-~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~ 680 (1466)
T PTZ00265 602 ILDEATSSLDNKSEYLVQK-TINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNK 680 (1466)
T ss_pred EEeCcccccCHHHHHHHHH-HHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccc
Confidence 9999999999999888864 555554 489999999999999999999999986
Q ss_pred ----------------------eEEEecChHHHHh-cCchHHHHHHHHHHHhhhh-----c--c----c--C-CC-Cc--
Q 000755 817 ----------------------KITQAGKYNDILN-SGTDFMVLVGAHQQALSAL-----D--S----I--E-GG-PV-- 856 (1300)
Q Consensus 817 ----------------------~i~~~g~~~~l~~-~~~~~~~l~~~~~~~~~~~-----~--~----~--~-~~-~~-- 856 (1300)
+|+++|+|+||++ .++.|..++..+....... + . . . .. ..
T Consensus 681 ~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (1466)
T PTZ00265 681 NNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDP 760 (1466)
T ss_pred cccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccccccccccc
Confidence 5999999999997 5788888875542110000 0 0 0 0 00 00
Q ss_pred ---c----cc-c--------cc--c--ccCCCc------------ccccc-c----------------------------
Q 000755 857 ---S----ER-I--------SM--N--KENGGM------------DTTNG-V---------------------------- 875 (1300)
Q Consensus 857 ---~----~~-~--------~~--~--~~~~~e------------~~~~g-~---------------------------- 875 (1300)
. .+ . .. . .+..++ ....+ .
T Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (1466)
T PTZ00265 761 DEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTIIALSILVAGGL 840 (1466)
T ss_pred ccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0 00 0 000000 00011 0
Q ss_pred ----------------------------------------------------------------------c---------
Q 000755 876 ----------------------------------------------------------------------T--------- 876 (1300)
Q Consensus 876 ----------------------------------------------------------------------~--------- 876 (1300)
.
T Consensus 841 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~ 920 (1466)
T PTZ00265 841 YPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQD 920 (1466)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC
Confidence 0
Q ss_pred -ccCcc--ccccccc--h------------------------------------------hhhhhhHHHHHHH--H---H
Q 000755 877 -MKEGN--EDIQTDK--V------------------------------------------DEQYYIPSARELS--R---L 904 (1300)
Q Consensus 877 -lp~gr--nr~s~D~--v------------------------------------------~~~~y~~~~r~l~--r---l 904 (1300)
.++|+ +|++.|. + +...+....+... + .
T Consensus 921 ~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1466)
T PTZ00265 921 KHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKK 1000 (1466)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 02355 6777776 2 0011111111111 0 0
Q ss_pred -------------HhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000755 905 -------------VGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLT 971 (1300)
Q Consensus 905 -------------~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~ 971 (1300)
+....+.....+.|+++|++|||+|+.|+.+.+++.+..+...+..........++....+.+..+.
T Consensus 1001 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1080 (1466)
T PTZ00265 1001 EINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFI 1080 (1466)
T ss_pred hccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111334577899999999999999999999999988887776655544444333333344443333
Q ss_pred HHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCC-CCCC
Q 000755 972 FAFSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRP-DCSW 1049 (1300)
Q Consensus 972 ~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~-~~~w 1049 (1300)
.++++++ ...+..|.++.+.+..++.+.+........+...+.++++...|.+|+.++++.+++.+.......+ +...
T Consensus 1081 ~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~ 1160 (1466)
T PTZ00265 1081 NSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKN 1160 (1466)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCC
Confidence 3333333 2345578888887766665554444456667788889999999999999999876542211011110 0012
Q ss_pred CCCceEEEEeeeeeeCCC-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC--------------------
Q 000755 1050 PTHGEVDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-------------------- 1108 (1300)
Q Consensus 1050 p~~g~i~~~~v~~~y~~~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-------------------- 1108 (1300)
+..|.|+|+||+|+|+++ ..+||+|+||+|++|+++||||+||||||||+++|.|+|+|
T Consensus 1161 ~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~ 1240 (1466)
T PTZ00265 1161 DIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQ 1240 (1466)
T ss_pred CCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccc
Confidence 345789999999999743 24699999999999999999999999999999999999999
Q ss_pred ----------------------------------CcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCC-
Q 000755 1109 ----------------------------------TAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPL- 1153 (1300)
Q Consensus 1109 ----------------------------------~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~- 1153 (1300)
++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+.
T Consensus 1241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~ 1320 (1466)
T PTZ00265 1241 DYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGK 1320 (1466)
T ss_pred ccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCC
Confidence 699999999999999999999999999999999999999999886
Q ss_pred CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHH
Q 000755 1154 EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQT 1233 (1300)
Q Consensus 1154 ~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~ 1233 (1300)
.+.+|+++++|++.++++++|.++|+||||.|||+|.+||||||||+||||||+++|+|||||||||+||+++++.|+++
T Consensus 1321 ~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~ 1400 (1466)
T PTZ00265 1321 EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKT 1400 (1466)
T ss_pred CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCcEEEEEeCChhhhhccCEEEEEeC----CEE-EEecChhhHHhcCCChHHHHHHHH
Q 000755 1234 LRQHF--SDCTVITIAHRITSVIDSDMVLLLSH----GII-EEYDSPTKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1234 l~~~~--~~~Tvi~iaHrl~~i~~~D~v~vl~~----G~i-~e~g~~~~l~~~~~~~f~~l~~~~ 1291 (1300)
|++.. +++|+|+||||++++..||+|+||++ |++ +|.|+|++|+++++|.|++|++.+
T Consensus 1401 L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1401 IVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 99874 68999999999999999999999999 995 489999999975679999999764
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.6e-76 Score=701.56 Aligned_cols=548 Identities=23% Similarity=0.292 Sum_probs=453.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNG-EREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAG 369 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~-~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g 369 (1300)
++.+.+..|+.+..+.++.++..+.....|.++.+++|.+.. .+... .-.-...++....++.+++.....+..+..+
T Consensus 138 l~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~-~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~ 216 (716)
T KOG0058|consen 138 LLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSAD-ALKRACTILLGLFLIGALANAIRGGLLQYAG 216 (716)
T ss_pred HHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667789999999999999999999999999999998866 22211 1111122233334445666666666677788
Q ss_pred HHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000755 370 IKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFG-WYMHDPWLVILQVSLALLI-LYKNLGLASIAAL 447 (1300)
Q Consensus 370 ~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~-~~~~~~~~~~l~i~~~l~l-L~~~lg~~~l~~l 447 (1300)
.++-..|+..+|+++++....+++++.+||++|+++.|++.+.+.+ .++....-..++.+.++.+ ++..+.++. +.+
T Consensus 217 ~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltl-v~~ 295 (716)
T KOG0058|consen 217 ERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTL-VTL 295 (716)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHH-HHH
Confidence 8888999999999999999999999999999999999999998854 4566666666666665554 455666554 445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Q 000755 448 FATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGA--M 525 (1300)
Q Consensus 448 ~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~--~ 525 (1300)
+.+.+++.+...+++.+++..++..++..+-.+...|.|++||+||.|+.|+...++..+.-+.-.+..+|...... .
T Consensus 296 i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~ 375 (716)
T KOG0058|consen 296 IVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFF 375 (716)
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhH
Confidence 55666666778899999999999999999999999999999999999999987666654432211121122111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 000755 526 TSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVV 605 (1300)
Q Consensus 526 ~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 605 (1300)
...-+......++++.+|.+++.++.||.|.+.+++.+-..+..++..+...++.++++..|.+|+.++++.++.-+...
T Consensus 376 ~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G 455 (716)
T KOG0058|consen 376 GSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTG 455 (716)
T ss_pred hHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCC
Confidence 11112223346778889999999999999999999999999999999999999999999999999999998755433222
Q ss_pred cCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe----
Q 000755 606 EKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT---- 681 (1300)
Q Consensus 606 ~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~---- 681 (1300)
...|. ...+.|+|+||+|+||..++.++|+|+||+|+|||.+|+||||||||||+.++|+.+|+|++|+|.+||.
T Consensus 456 ~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~ 534 (716)
T KOG0058|consen 456 TLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISD 534 (716)
T ss_pred ccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhh
Confidence 22332 4567899999999999888899999999999999999999999999999999999999999999999993
Q ss_pred ---------EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 682 ---------KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 682 ---------~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
||+|.|+|.+|++||+|||.+|.+ .++|+++++.+.+..++++..+|+|++|.+||+|..||||||||||
T Consensus 535 ~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIA 614 (716)
T KOG0058|consen 535 INHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIA 614 (716)
T ss_pred cCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHH
Confidence 699999999999999999999987 6889999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
|||||++||.||||||+|||||++++. +.++.+...++++|||+|+||++++++||+|+|+++|+++|.|+|+|+++..
T Consensus 615 IARALlr~P~VLILDEATSALDaeSE~-lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~ 693 (716)
T KOG0058|consen 615 IARALLRNPRVLILDEATSALDAESEY-LVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKP 693 (716)
T ss_pred HHHHHhcCCCEEEEechhhhcchhhHH-HHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCc
Confidence 999999999999999999999999965 4588888889999999999999999999999999999999999999999887
Q ss_pred -chHHHHHHHHH
Q 000755 832 -TDFMVLVGAHQ 842 (1300)
Q Consensus 832 -~~~~~l~~~~~ 842 (1300)
+.|.+++..+.
T Consensus 694 ~gly~~Lv~~q~ 705 (716)
T KOG0058|consen 694 NGLYAKLVQRQL 705 (716)
T ss_pred ccHHHHHHHHhc
Confidence 67888876543
No 10
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.3e-74 Score=724.10 Aligned_cols=546 Identities=24% Similarity=0.274 Sum_probs=430.5
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 289 KLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVA 368 (1300)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 368 (1300)
+.++.+.+.+++.+++..++.++..++..+.|++++.++|.+...+......+.+++++++..++..++.....+...+.
T Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK11174 11 RWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKA 90 (588)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666778889999999999999999999999999999997642111111223334445555566677777777778889
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000755 369 GIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLIL-YKNLGLASIAA 446 (1300)
Q Consensus 369 g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL-~~~lg~~~l~~ 446 (1300)
+.++...++..+|+|.++++...++++++|+++|++++|++++.+++. .+..++...+.++++++++ +..+.++ ++.
T Consensus 91 ~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-l~~ 169 (588)
T PRK11174 91 GQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAG-LIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 999999999999999999999999999999999999999999998764 4445555555444444433 3333333 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000755 447 LFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIE----LRKIEAGWLKKFLYT 522 (1300)
Q Consensus 447 l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~----~R~~E~~~l~~~~~~ 522 (1300)
++++++.+++..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+ .++.+.+..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455566788888888899999999999999999999999999999998887744 344443333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 523 GAMTSFVFWGAPTFVSVATFGACMLLGIPLESG---------KILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIAS 593 (1300)
Q Consensus 523 ~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g---------~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~ 593 (1300)
..+..+.. ..+. +.++.++++.+. +.++.| .+++++.+...+..|+..++..+..+.+++++.+||.+
T Consensus 250 ~~~~~~~~-~~~~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFA-SISI-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHH-HHHH-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222111 1111 122233333333 344444 34555566677889999999999999999999999999
Q ss_pred HhcCCCCCcccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCc
Q 000755 594 FLCLDDLQSDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS 673 (1300)
Q Consensus 594 fL~~~e~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~ 673 (1300)
+++.++.++..............|+++|++|.|++ ++++|+|+||+|++|+++||+|+||||||||+++|+|++ |++
T Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 327 FLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred HHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 99876532211111001112346999999998753 367999999999999999999999999999999999999 999
Q ss_pred cEEEEcC-------------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000755 674 GTLKLCG-------------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERG 739 (1300)
Q Consensus 674 G~i~~~g-------------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g 739 (1300)
|+|.++| .++||||+||+|++||+|||++|+| .++++++++++.|+++++++.+|+|++|.+||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999998 4799999999999999999999976 8999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEE
Q 000755 740 INLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKIT 819 (1300)
Q Consensus 740 ~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~ 819 (1300)
.+|||||||||+||||+++||+||||||||||||+++++++.+ .+....+++|+|+||||++.+..||+|++|++|+|+
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~ 562 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIV 562 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEe
Confidence 9999999999999999999999999999999999999999975 667777899999999999999999999999999999
Q ss_pred EecChHHHHhcCchHHHHHHHHH
Q 000755 820 QAGKYNDILNSGTDFMVLVGAHQ 842 (1300)
Q Consensus 820 ~~g~~~~l~~~~~~~~~l~~~~~ 842 (1300)
+.|+|+|+++.++.|.++...+.
T Consensus 563 e~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 563 QQGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred ecCCHHHHHhcchHHHHHHHHhh
Confidence 99999999999888888875543
No 11
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.2e-73 Score=706.82 Aligned_cols=548 Identities=24% Similarity=0.315 Sum_probs=464.7
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 287 AFKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQ 366 (1300)
Q Consensus 287 ~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 366 (1300)
..+.++..++.+|+.++..++..++..++.++.|++.+.++|.+-.... .....++++++.+..+++.+......+...
T Consensus 141 ~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 141 GLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-RSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred chHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777788899999999999999999999999999999998865432 233456677777788888888888888889
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hh-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 367 VAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MH-DPWLVILQVSLALLILYKNLGLASI 444 (1300)
Q Consensus 367 ~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~-~~~~~~l~i~~~l~lL~~~lg~~~l 444 (1300)
.++.|+...+...+|+|.+++|..+++++++|++++++. |.++|.++... +. .+...++-++...+|+++.+. .++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~-L~l 297 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWK-LTL 297 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 999999999999999999999999999999999999996 99999998642 22 233344444444445555544 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 445 AALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGA 524 (1300)
Q Consensus 445 ~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~ 524 (1300)
++++.+++.+++..++.+..++..++.++...++.+.+.|.++||++||..+.|+.+..++++.-.+..+...+......
T Consensus 298 i~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~ 377 (709)
T COG2274 298 IVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLAL 377 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 66667777777778888888999999999999999999999999999999999999999998765555544333333322
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 000755 525 MTSFVFWG--APTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQS 602 (1300)
Q Consensus 525 ~~~~~~~~--~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~ 602 (1300)
........ .-.-+.+++||++.++.+.+|.|.++++.++.+.+..|+.++.+.+..+++++++.+|+.++++.|.+++
T Consensus 378 ~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~ 457 (709)
T COG2274 378 ILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQE 457 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 22222111 2223566889999999999999999999999999999999999999999999999999999998876543
Q ss_pred ccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--
Q 000755 603 DVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-- 680 (1300)
Q Consensus 603 ~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-- 680 (1300)
............+.|+++|++|+|+++ ++++|+|+||+|++||++||+|+||||||||+|+|+|.|+|++|+|.+||
T Consensus 458 ~~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~d 536 (709)
T COG2274 458 GDKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVD 536 (709)
T ss_pred cccccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEe
Confidence 322112223456789999999999854 34899999999999999999999999999999999999999999999999
Q ss_pred -----------eEEEEecCCcCCCCCHHHHHhcCCCC-CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 681 -----------TKAYVAQSPWIQSGNIEDNILFGKPM-DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 681 -----------~~ayv~Q~~~l~~~Ti~eNI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
.++||+|++.+|+|||+|||.+|.|. +.|+..++++.++.++++..+|.|++|.+||+|.||||||||
T Consensus 537 l~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQ 616 (709)
T COG2274 537 LNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQ 616 (709)
T ss_pred HHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHH
Confidence 36999999999999999999999995 568999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
||+||||++++|+|+||||||||||+++++.+.++ +.....++|+|+||||++.+..||+|+||++|+|+++|+++|++
T Consensus 617 rlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~-L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 617 RLALARALLSKPKILLLDEATSALDPETEAIILQN-LLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHH-HHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 99999999999999999999999999999999765 56677889999999999999999999999999999999999999
Q ss_pred hcCchHHHHHH
Q 000755 829 NSGTDFMVLVG 839 (1300)
Q Consensus 829 ~~~~~~~~l~~ 839 (1300)
+.++.|..+..
T Consensus 696 ~~~g~y~~l~~ 706 (709)
T COG2274 696 AQGGLYARLYQ 706 (709)
T ss_pred HhcChHHHHHh
Confidence 99888887764
No 12
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.2e-71 Score=703.77 Aligned_cols=542 Identities=22% Similarity=0.260 Sum_probs=440.7
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 289 KLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVA 368 (1300)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 368 (1300)
.+++..++.+++.++...++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD-RSLLVQIALALLAAAVGAAAFQLAQSLAVLRL 203 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555567788888889999999999999999999999998753322 12233445555555666677777777788899
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 369 GIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHD-PWLVILQVSLALLILYKNLGLASIAA 446 (1300)
Q Consensus 369 g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~-~~~~~l~i~~~l~lL~~~lg~~~l~~ 446 (1300)
+.++...++..+|+|.++++...++++++|+++++++ |++.+.+++.. +.. +...++.++..+++++.. ++.+++.
T Consensus 204 ~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~l~li~ 281 (686)
T TIGR03797 204 ETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYS-WKLALVA 281 (686)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 9999999999999999999999999999999999997 89999887543 222 223333333333333333 3344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 447 LFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMT 526 (1300)
Q Consensus 447 l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 526 (1300)
++++++.+++...+.+..++..++.++..+++.+.+.|.++|+++||.++.|+.+.+++++..+...+...+........
T Consensus 282 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (686)
T TIGR03797 282 VALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLL 361 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556667778888888889999999999999999999999999999999998888775444333333322222222
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000755 527 SFVFWGA--PTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 527 ~~~~~~~--p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 604 (1300)
..+.... -..+.++.++++.+.++.+|.|.++++.+++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 362 ~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 441 (686)
T TIGR03797 362 TVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 2221111 12234456677888889999999999999999999999999999999999999999999999765432211
Q ss_pred ccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----
Q 000755 605 VEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---- 680 (1300)
Q Consensus 605 ~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---- 680 (1300)
. .........|+++|++|+|+++ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 442 ~--~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 518 (686)
T TIGR03797 442 K--TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLA 518 (686)
T ss_pred c--CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcC
Confidence 1 1111223579999999999743 46899999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 681 ---------TKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 681 ---------~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
.++||+|+|++|++||+|||.+|+|.++++++++++.|+++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 519 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRia 598 (686)
T TIGR03797 519 GLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLL 598 (686)
T ss_pred cCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
||||++++|+|++||||||+||+++++++.+. +... ++|+|+||||++.++.||+|++|++|+|++.|+|+|+++.+
T Consensus 599 lARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~ 675 (686)
T TIGR03797 599 IARALVRKPRILLFDEATSALDNRTQAIVSES-LERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMARE 675 (686)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999765 4443 68999999999999999999999999999999999999988
Q ss_pred chHHHHHH
Q 000755 832 TDFMVLVG 839 (1300)
Q Consensus 832 ~~~~~l~~ 839 (1300)
+.|..+..
T Consensus 676 ~~y~~l~~ 683 (686)
T TIGR03797 676 GLFAQLAR 683 (686)
T ss_pred cHHHHHHH
Confidence 88887764
No 13
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.3e-71 Score=707.33 Aligned_cols=544 Identities=19% Similarity=0.238 Sum_probs=446.3
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 289 KLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVA 368 (1300)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 368 (1300)
+.++..++.+++.++..+++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...++
T Consensus 143 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (710)
T TIGR03796 143 RALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-QDWLRPLLLGMGLTALLQGVLTWLQLYYLRRL 221 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555677788888888899999999999999999999997654322 12233444555555666777777777888899
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 369 GIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASIAAL 447 (1300)
Q Consensus 369 g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l 447 (1300)
+.++...++..+|+|.++++...+.++++|+++++++.| +.+.+++. .+.......+.+++.+++++..-++.+++.+
T Consensus 222 ~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 300 (710)
T TIGR03796 222 QIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGI 300 (710)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 67887654 3344444444444444444443334445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 448 FATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTS 527 (1300)
Q Consensus 448 ~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 527 (1300)
+.+++.+.+..++.+...+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+....+.+...+.........
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (710)
T TIGR03796 301 AFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILG 380 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666777788888888888999999999999999999999999999999999998876666655444333322222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 000755 528 FVFWGA--PTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVV 605 (1300)
Q Consensus 528 ~~~~~~--p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 605 (1300)
...... ...+.+++++++.+.++.+|.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 381 ~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 460 (710)
T TIGR03796 381 VLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEE 460 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 211111 123345677888888999999999999999999999999999999999999999999999998764432211
Q ss_pred ----c--CCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEc
Q 000755 606 ----E--KHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 679 (1300)
Q Consensus 606 ----~--~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~ 679 (1300)
. ..+.......|+++|++|+|+.+ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++
T Consensus 461 ~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 539 (710)
T TIGR03796 461 EEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFD 539 (710)
T ss_pred ccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 0 01101224579999999999743 4689999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHH
Q 000755 680 G-------------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGG 745 (1300)
Q Consensus 680 g-------------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGG 745 (1300)
| .++||||+|++|++||+|||.++.+ .++++++++++.++++++++.+|+|++|.+||+|.+||||
T Consensus 540 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGG 619 (710)
T TIGR03796 540 GIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGG 619 (710)
T ss_pred CEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHH
Confidence 8 3699999999999999999999875 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChH
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||||+||||++++|+|+||||||||||+++++++++.+.. .++|+|+||||++.+..||+|++|++|+|++.|+|+
T Consensus 620 QrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 620 QRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999876533 589999999999999999999999999999999999
Q ss_pred HHHhcCchHHHHH
Q 000755 826 DILNSGTDFMVLV 838 (1300)
Q Consensus 826 ~l~~~~~~~~~l~ 838 (1300)
|+++.++.|.+++
T Consensus 697 ~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAVGGAYARLI 709 (710)
T ss_pred HHHHcCCcHHHHh
Confidence 9998888887654
No 14
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.3e-70 Score=697.99 Aligned_cols=537 Identities=24% Similarity=0.314 Sum_probs=439.3
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 288 FKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQV 367 (1300)
Q Consensus 288 ~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 367 (1300)
.+.++..++.+++.+....++.++..++.++.|++++.++|.+..... ....+.+++++++..++..+......+...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA-FETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566677888889989999999999999999999999998653322 1222334444444555666777667777888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 368 AGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MH-DPWLVILQVSLALLILYKNLGLASIA 445 (1300)
Q Consensus 368 ~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~-~~~~~~l~i~~~l~lL~~~lg~~~l~ 445 (1300)
++.++...++..+|+|.++++... .+.++|++++++ +|++.+.+++.. +. .+...++.++..+++++.. ++.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~l~li 290 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIG-GPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH-hHHHHH
Confidence 999999999999999999999887 678999999999 799999987543 22 2333333333333444433 334455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 446 ALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAM 525 (1300)
Q Consensus 446 ~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~ 525 (1300)
.++++++.+++..++.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+..+...+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666667777888889999999999999999999999999999999999999999987766555544444333332
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000755 526 TSFVFWGAP--TFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSD 603 (1300)
Q Consensus 526 ~~~~~~~~p--~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 603 (1300)
......... ..+.+++++++.+.++.+|.|.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 222222211 223456678888889999999999999999999999999999999999999999999999987654322
Q ss_pred cccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---
Q 000755 604 VVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--- 680 (1300)
Q Consensus 604 ~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--- 680 (1300)
.....+.......|+++|++|+|+. .++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 451 ~~~~~~~~~~~~~I~~~~vsf~Y~~-~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l 529 (694)
T TIGR03375 451 GTRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDI 529 (694)
T ss_pred CCCCCCCCCccceEEEEEEEEEeCC-CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 1111111122357999999999973 346899999999999999999999999999999999999999999999998
Q ss_pred ----------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 ----------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 ----------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++||+|+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+|.+||||||||
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQR 609 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQA 609 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHH
Confidence 4699999999999999999999987 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|+||||++++|+|++||||||+||+++++.+.+ .+....+++|+|+||||++.+..||+|++|++|+|++.|+|+|+++
T Consensus 610 lalARall~~p~iliLDE~Ts~LD~~te~~i~~-~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 610 VALARALLRDPPILLLDEPTSAMDNRSEERFKD-RLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 999999999999999999999999999999865 5666678999999999999999999999999999999999999975
Q ss_pred c
Q 000755 830 S 830 (1300)
Q Consensus 830 ~ 830 (1300)
.
T Consensus 689 ~ 689 (694)
T TIGR03375 689 A 689 (694)
T ss_pred H
Confidence 4
No 15
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.1e-70 Score=695.47 Aligned_cols=540 Identities=21% Similarity=0.236 Sum_probs=424.9
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 293 ALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKM 372 (1300)
Q Consensus 293 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~i 372 (1300)
.+++.+|+.++..+++.++..++..+.|++++.++|.+......... ...+..+++..++..++.....+.....+.++
T Consensus 154 ~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 232 (711)
T TIGR00958 154 GLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPAL-ASAIFFMCLLSIASSVSAGLRGGSFNYTMARI 232 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777888888999999999999999999999988643221111 11111222222333343333344455667777
Q ss_pred HHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 373 RSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASIAALFATV 451 (1300)
Q Consensus 373 r~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~ 451 (1300)
...++..+|++.++.+...+++.++|+++|++++|++.+.+++. .+..++...+.+++++++++..-+..+++.++.++
T Consensus 233 ~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~ 312 (711)
T TIGR00958 233 NLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLP 312 (711)
T ss_pred HHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 78888899999999999999999999999999999999998654 34555555555555554443322233334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000755 452 LIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVF- 530 (1300)
Q Consensus 452 l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~- 530 (1300)
+...+...+.+..++..++.++..++..+...|.++|+++||.|++|+.+.+++.+..++-.+...+............
T Consensus 313 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (711)
T TIGR00958 313 LVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTS 392 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666778888888888888999999999999999999999999999887776554332222222111111111111
Q ss_pred -HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCC
Q 000755 531 -WGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHP 609 (1300)
Q Consensus 531 -~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~ 609 (1300)
......+.++.++.+.+..+.++.|.+++++.+...+..|+..++..+..+.+++++.+||.++++.++..+......+
T Consensus 393 ~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~ 472 (711)
T TIGR00958 393 VLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAP 472 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 1111233445677788888999999999999999999999999999999999999999999999976543322111111
Q ss_pred CCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------
Q 000755 610 RGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------- 680 (1300)
Q Consensus 610 ~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------- 680 (1300)
......|+++|++|+|+..+++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|
T Consensus 473 -~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~ 551 (711)
T TIGR00958 473 -LNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHH 551 (711)
T ss_pred -CCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHH
Confidence 1223579999999999854456899999999999999999999999999999999999999999999998
Q ss_pred ----eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHH
Q 000755 681 ----TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 755 (1300)
Q Consensus 681 ----~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARA 755 (1300)
.++||+|+|++|++||||||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+|||||||||+||||
T Consensus 552 ~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARA 631 (711)
T TIGR00958 552 YLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARA 631 (711)
T ss_pred HHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHH
Confidence 4699999999999999999999976 67899999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchHH
Q 000755 756 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFM 835 (1300)
Q Consensus 756 ly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 835 (1300)
++++|+|+|||||||+||+++++.+.+ ....+++|+|+||||++.+..||+|++|++|+|++.|+|+|+++.++.|.
T Consensus 632 Ll~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~ 708 (711)
T TIGR00958 632 LVRKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYK 708 (711)
T ss_pred HhcCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchH
Confidence 999999999999999999999998876 22347899999999999999999999999999999999999998877776
Q ss_pred HH
Q 000755 836 VL 837 (1300)
Q Consensus 836 ~l 837 (1300)
++
T Consensus 709 ~l 710 (711)
T TIGR00958 709 HL 710 (711)
T ss_pred hc
Confidence 54
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.5e-69 Score=689.94 Aligned_cols=539 Identities=23% Similarity=0.304 Sum_probs=434.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGI 370 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 370 (1300)
++..++.+++.++...++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...+++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (708)
T TIGR01193 147 FIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM-MGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQ 225 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444567788888888888999999999999999999997654322 1122333344444555566666666677888999
Q ss_pred HHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 371 KMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYM-HDPW-LVILQVSLALLILYKNLGLASIAALF 448 (1300)
Q Consensus 371 ~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~-~~~~-~~~l~i~~~l~lL~~~lg~~~l~~l~ 448 (1300)
++...++..+|+|.++++...+++.++|+++++++ |++.+.+++... .... ..++.++..+++++..+.++ ++.++
T Consensus 226 ~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-li~l~ 303 (708)
T TIGR01193 226 RLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLF-LLSLL 303 (708)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHH
Confidence 99999999999999999999999999999999998 999998875432 2222 33333333334444444433 34444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Q 000755 449 ATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYT----GA 524 (1300)
Q Consensus 449 ~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~----~~ 524 (1300)
++++..++...+.+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..+...+...+.... ..
T Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (708)
T TIGR01193 304 SIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQA 383 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556667788888889999999999999999999999999999999999888866544333322222111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000755 525 MTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 525 ~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 604 (1300)
+..++.. ...+.++++|++.+..+.+|.|.++++..++..+..|+..+...+..+.+++++++|+.++++.++..+..
T Consensus 384 ~~~~~~~--~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 461 (708)
T TIGR01193 384 IKAVTKL--ILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINK 461 (708)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 2221111 12344567888888999999999999999999999999999999999999999999999999766443221
Q ss_pred ccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----
Q 000755 605 VEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---- 680 (1300)
Q Consensus 605 ~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---- 680 (1300)
....+.....+.|+++|++|+|+. ++++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 462 ~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 539 (708)
T TIGR01193 462 KKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLK 539 (708)
T ss_pred ccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHH
Confidence 111111223457999999999963 36899999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEecCCcCCCCCHHHHHhcCC-C-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 ---------TKAYVAQSPWIQSGNIEDNILFGK-P-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 ---------~~ayv~Q~~~l~~~Ti~eNI~fg~-~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++||||+|++|++||+|||.+|. + .+++++.++++.++++++++.+|.|++|.+||+|.+||||||||
T Consensus 540 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQR 619 (708)
T TIGR01193 540 DIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQR 619 (708)
T ss_pred HcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHH
Confidence 369999999999999999999983 3 78899999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|+||||++++|+|+|||||||+||+++++++.+.+ .. ++++|+|+||||++.+..||+|++|++|++++.|+|+|+++
T Consensus 620 ialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 620 IALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LN-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred HHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HH-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999987654 44 37899999999999999999999999999999999999998
Q ss_pred cCchHHHHH
Q 000755 830 SGTDFMVLV 838 (1300)
Q Consensus 830 ~~~~~~~l~ 838 (1300)
.++.|.+++
T Consensus 698 ~~~~y~~l~ 706 (708)
T TIGR01193 698 RNGFYASLI 706 (708)
T ss_pred cCCcHHHHh
Confidence 888887765
No 17
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.8e-68 Score=670.10 Aligned_cols=545 Identities=17% Similarity=0.212 Sum_probs=433.1
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGI 370 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 370 (1300)
++.+++.+++.++..+++.++..++..+.|++++.+++.+.+.... .....+++++++..++..+......+...+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 94 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR-SVLKWMPLVVIGLMILRGITSFISSYCISWVSG 94 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777787777888888888888999999999876543221 111222222333444455555555566778888
Q ss_pred HHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 371 KMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASIAALFA 449 (1300)
Q Consensus 371 ~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~ 449 (1300)
++...++..+|+|.++++...+.+.+.|++++++++|++.+.++.. .+..++..++.+++.+++++..-++.+++.+++
T Consensus 95 ~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 174 (582)
T PRK11176 95 KVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVI 174 (582)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998643 344455555555555554443333333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 450 TVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFV 529 (1300)
Q Consensus 450 ~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 529 (1300)
+++.+++...+.++.++..++.++..++..+...|.++|+++||.+++|+.+.+++++.-+.-.+...+...........
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (582)
T PRK11176 175 APIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPI 254 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556677888888888899999999999999999999999999999988888665333322222222211111111
Q ss_pred HH--HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 000755 530 FW--GAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEK 607 (1300)
Q Consensus 530 ~~--~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 607 (1300)
.. ..-..+.++.++.+.+..+.+++|.+.++..++..+..|+..+...+..+.+++.+++|+.++++.++..+.....
T Consensus 255 ~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 334 (582)
T PRK11176 255 IQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKRV 334 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCcC
Confidence 11 1112334456667777888999999999999999999999999999999999999999999999766442211111
Q ss_pred CCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------
Q 000755 608 HPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------ 681 (1300)
Q Consensus 608 ~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------ 681 (1300)
.......|+++|++|+|++ .++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 335 --~~~~~~~i~~~~vsf~y~~-~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~ 411 (582)
T PRK11176 335 --IERAKGDIEFRNVTFTYPG-KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYT 411 (582)
T ss_pred --CCCCCCeEEEEEEEEecCC-CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcC
Confidence 1112346999999999974 3468999999999999999999999999999999999999999999999984
Q ss_pred -------EEEEecCCcCCCCCHHHHHhcCCC--CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 -------KAYVAQSPWIQSGNIEDNILFGKP--MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 -------~ayv~Q~~~l~~~Ti~eNI~fg~~--~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
++||||+|++|++||+|||.+|++ +++++++++++.++++++++.+|+|++|.+||+|.+|||||||||+|
T Consensus 412 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~L 491 (582)
T PRK11176 412 LASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAI 491 (582)
T ss_pred HHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHH
Confidence 599999999999999999999864 78999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGT 832 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 832 (1300)
|||+|++|+|++|||||||||+++++.+++. +....+++|+|+||||++.++.||+|++|++|+|++.|+|+++++.++
T Consensus 492 ARall~~~~ililDEptsaLD~~t~~~i~~~-l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~ 570 (582)
T PRK11176 492 ARALLRDSPILILDEATSALDTESERAIQAA-LDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNG 570 (582)
T ss_pred HHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 9999999999999999999999999998754 555567899999999999999999999999999999999999999988
Q ss_pred hHHHHHHH
Q 000755 833 DFMVLVGA 840 (1300)
Q Consensus 833 ~~~~l~~~ 840 (1300)
.|.++...
T Consensus 571 ~y~~l~~~ 578 (582)
T PRK11176 571 VYAQLHKM 578 (582)
T ss_pred hHHHHHHH
Confidence 88887653
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.8e-71 Score=651.35 Aligned_cols=466 Identities=27% Similarity=0.388 Sum_probs=363.4
Q ss_pred eEEEEeEEEEecCCCC-CCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCC----ccEEEEcCe---------
Q 000755 616 AIEIVDGNFAWDISSN-NPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI----SGTLKLCGT--------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~----~G~i~~~g~--------- 681 (1300)
-++++|++..|..... .++++||||+|.+||.+||||+|||||||++++|+|.+++. +|+|.++|+
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975532 25999999999999999999999999999999999999987 899988873
Q ss_pred --------EEEEecCCcC-CC--CCHHHHHh----cCCCC----CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCC
Q 000755 682 --------KAYVAQSPWI-QS--GNIEDNIL----FGKPM----DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINL 742 (1300)
Q Consensus 682 --------~ayv~Q~~~l-~~--~Ti~eNI~----fg~~~----~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~L 742 (1300)
+||++|+|+- +| .||.+-|. ..... ..++..+.++..++.+.... +.-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 6999999963 44 46666554 23222 12334445555665443322 3345789
Q ss_pred CHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEE
Q 000755 743 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKIT 819 (1300)
Q Consensus 743 SGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~ 819 (1300)
|||||||+.||+||..+|+++|+||||+|||+.+.++|.+ +++.+. .|.++|+|||+++.+.. ||+|+||.+|+++
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~-llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iV 234 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILD-LLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIV 234 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH-HHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEE
Confidence 9999999999999999999999999999999999999986 455443 47899999999999876 9999999999999
Q ss_pred EecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHH
Q 000755 820 QAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSAR 899 (1300)
Q Consensus 820 ~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r 899 (1300)
+.|+.++++++...- |-+.
T Consensus 235 E~G~~~~i~~~p~hp-----------------------------------------------------------YT~~-- 253 (539)
T COG1123 235 ETGPTEEILSNPQHP-----------------------------------------------------------YTRG-- 253 (539)
T ss_pred EecCHHHHHhccCCc-----------------------------------------------------------ccHH--
Confidence 999999998653210 0000
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 900 ELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLL 979 (1300)
Q Consensus 900 ~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 979 (1300)
+ +
T Consensus 254 -L-----------------------------------------------------------------------------l 255 (539)
T COG1123 254 -L-----------------------------------------------------------------------------L 255 (539)
T ss_pred -H-----------------------------------------------------------------------------H
Confidence 0 0
Q ss_pred HHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEe
Q 000755 980 ISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILN 1059 (1300)
Q Consensus 980 ~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~ 1059 (1300)
. + .|...............-+....++++|
T Consensus 256 ~-----------------------------------------a---------~p~~~~~~~~~~~~~~~~~~~~ll~V~~ 285 (539)
T COG1123 256 A-----------------------------------------A---------VPRLGDEKIIRLPRRGPLRAEPLLSVRN 285 (539)
T ss_pred h-----------------------------------------h---------CCCcccccccccccccccccCceeEeee
Confidence 0 0 0000000000000000001344689999
Q ss_pred eeeeeCC---------CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCee--cCCCCHHHH
Q 000755 1060 LQVRYAP---------HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGIN--ISSIGLHDL 1128 (1300)
Q Consensus 1060 v~~~y~~---------~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~d--i~~i~~~~l 1128 (1300)
++++|.. +...+++||||++++||++||||.||||||||.++|+|+++|++|+|.++|.| .+.-....+
T Consensus 286 l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~ 365 (539)
T COG1123 286 LSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRL 365 (539)
T ss_pred eeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhh
Confidence 9999974 12468999999999999999999999999999999999999999999999987 222224457
Q ss_pred hcccEEEcCCCCC--C-cccHHHhcC-CCC---C----CCHHHHHHHHHHcCCcH-HHHhhcCCCccccccCCCCCChhH
Q 000755 1129 RSRLSIIPQDPTM--F-EGTVRNNLD-PLE---E----YKDEEIWEALDKCQLGD-EVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1129 r~~i~~vpQ~~~l--f-~gTvr~Nl~-~~~---~----~~d~~i~~~l~~~~l~~-~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
|+++-+|+|||+- - ..||++++. |.. . ...+.+.+.|++++|.+ +..+.| ..|||||
T Consensus 366 r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP-----------~elSGGQ 434 (539)
T COG1123 366 RRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYP-----------HELSGGQ 434 (539)
T ss_pred hhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcCcch
Confidence 7899999999963 2 359999984 221 1 12234777899999975 344444 5679999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecCh
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~ 1273 (1300)
|||+||||||..+|++||+|||||+||+.+.+.|.+.|.+..+ +.|.|+||||+..+.. ||||+||++|+|+|.|+.
T Consensus 435 rQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~ 514 (539)
T COG1123 435 RQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPT 514 (539)
T ss_pred hHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999988653 6899999999999998 999999999999999999
Q ss_pred hhHHhcCCChHHHHHHHH
Q 000755 1274 TKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1274 ~~l~~~~~~~f~~l~~~~ 1291 (1300)
+++++++...|.+...+.
T Consensus 515 ~~v~~~p~h~Ytr~L~~a 532 (539)
T COG1123 515 EKVFENPQHPYTRKLLAA 532 (539)
T ss_pred HHHhcCCCChHHHHHHHh
Confidence 999998887777665543
No 19
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=6.6e-68 Score=663.88 Aligned_cols=543 Identities=21% Similarity=0.262 Sum_probs=441.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGI 370 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 370 (1300)
++.+++.+++.+++..++.++..++....|++++.+++....... ....+.+++++++..++..+......+...+.+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSN 83 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677788889999999999999999999999999986543221 1122223333444445556666666677888899
Q ss_pred HHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000755 371 KMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLIL-YKNLGLASIAALF 448 (1300)
Q Consensus 371 ~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL-~~~lg~~~l~~l~ 448 (1300)
++...++..+|+|.++.+...+.+.+.|+++++++.|++++.+++. .+..++...+.++++++++ +..+.+ +++.++
T Consensus 84 ~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l-~~i~l~ 162 (571)
T TIGR02203 84 KVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQL-TLIVVV 162 (571)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHH
Confidence 9999999999999999999999999999999999999999998764 3444454444455544444 434433 344445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 449 ATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSF 528 (1300)
Q Consensus 449 ~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~ 528 (1300)
++++.+.+..++.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..+...+...+..........
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (571)
T TIGR02203 163 MLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSP 242 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666677888888899999999999999999999999999999999998888877655444433333222222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 000755 529 VFWGAP--TFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVE 606 (1300)
Q Consensus 529 ~~~~~p--~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~ 606 (1300)
+..... ..+.++.++++.+..+.+|+|.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+....
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 322 (571)
T TIGR02203 243 ITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 222221 223445677777888999999999999999999999999999999999999999999999976554322111
Q ss_pred CCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----
Q 000755 607 KHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----- 681 (1300)
Q Consensus 607 ~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~----- 681 (1300)
+.......|+++|++|+|++. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 323 --~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~ 399 (571)
T TIGR02203 323 --AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADY 399 (571)
T ss_pred --CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhc
Confidence 111223469999999999743 468999999999999999999999999999999999999999999999983
Q ss_pred --------EEEEecCCcCCCCCHHHHHhcCCC--CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 682 --------KAYVAQSPWIQSGNIEDNILFGKP--MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 682 --------~ayv~Q~~~l~~~Ti~eNI~fg~~--~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
++||||+|++|++||+|||.++++ .++++++++++.|+++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 400 ~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRia 479 (571)
T TIGR02203 400 TLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLA 479 (571)
T ss_pred CHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHH
Confidence 699999999999999999999964 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
||||++++|+|++||||||+||+++++++.+ .+....+++|+|+|||+++.+..||+|++|++|++++.|+++++++..
T Consensus 480 LARall~~~~illLDEpts~LD~~~~~~i~~-~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~ 558 (571)
T TIGR02203 480 IARALLKDAPILILDEATSALDNESERLVQA-ALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARN 558 (571)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHH-HHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcC
Confidence 9999999999999999999999999999965 455666789999999999999999999999999999999999999877
Q ss_pred chHHHHHH
Q 000755 832 TDFMVLVG 839 (1300)
Q Consensus 832 ~~~~~l~~ 839 (1300)
..|.++..
T Consensus 559 ~~~~~~~~ 566 (571)
T TIGR02203 559 GLYAQLHN 566 (571)
T ss_pred CHHHHHHH
Confidence 77776654
No 20
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.4e-67 Score=662.97 Aligned_cols=542 Identities=20% Similarity=0.248 Sum_probs=424.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNE-GYVLVSTFFVAKIVECLAQRHWMFRLQVAG 369 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~-g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g 369 (1300)
+..+++.+++.++...++.++..++..+.|+++..++|.+......... ...+++++++..++..+......+...+.+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (592)
T PRK10790 14 LLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAA 93 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566778888888899999999999999999999976432221111 112233344444455666666677778888
Q ss_pred HHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000755 370 IKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMH-DPWLVILQVSLALL-ILYKNLGLASIAAL 447 (1300)
Q Consensus 370 ~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~-~~~~~~l~i~~~l~-lL~~~lg~~~l~~l 447 (1300)
.++...++..+|+|.++++...+.+.++|+++|++++|++.+.+++.... .+....+.++++++ +++..+.++ ++.+
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-li~l 172 (592)
T PRK10790 94 VGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMA-LVAI 172 (592)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 99999999999999999999999999999999999999999998765432 33333333333333 333333333 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-
Q 000755 448 FATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGW-LKKFLYTGAM- 525 (1300)
Q Consensus 448 ~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~-l~~~~~~~~~- 525 (1300)
+++++.+++..+..+..++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++.+..+...+. .+........
T Consensus 173 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 173 MIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334445556666777777778888888999999999999999999999998887654433222 2211111110
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000755 526 TSF--VFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSD 603 (1300)
Q Consensus 526 ~~~--~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 603 (1300)
..+ .......++ ++.++.+ ...+.++.|.+++++.++..+..|+..++..+..+.+++.+.+||.++++.++.+..
T Consensus 253 ~~~~~~~~~~~~~~-~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 253 RPLLSLFSALILCG-LLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHH-HHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 111 111111111 1122223 457789999999999999999999999999999999999999999999976543221
Q ss_pred cccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--
Q 000755 604 VVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-- 681 (1300)
Q Consensus 604 ~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-- 681 (1300)
.. .. ......|+++|++|+|+. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 331 ~~-~~--~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i 405 (592)
T PRK10790 331 ND-DR--PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPL 405 (592)
T ss_pred CC-cc--CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEh
Confidence 11 11 112346999999999973 357999999999999999999999999999999999999999999999983
Q ss_pred -----------EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 -----------KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 -----------~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
++||||+|++|++||+|||.+|++.++++.+++++.++++++++.+|+|++|.+||+|.+|||||||||
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRi 485 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLL 485 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 699999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
+||||++++|+|+|||||||+||+++++.+.+ .+....+++|+|+||||++.++.||+|++|++|++++.|+|+|+++.
T Consensus 486 alARaLl~~~~illlDEpts~LD~~t~~~i~~-~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~ 564 (592)
T PRK10790 486 ALARVLVQTPQILILDEATANIDSGTEQAIQQ-ALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA 564 (592)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999998865 55666678999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHH
Q 000755 831 GTDFMVLVGAH 841 (1300)
Q Consensus 831 ~~~~~~l~~~~ 841 (1300)
++.|.++...+
T Consensus 565 ~~~y~~l~~~~ 575 (592)
T PRK10790 565 QGRYWQMYQLQ 575 (592)
T ss_pred CCHHHHHHHHH
Confidence 99999887644
No 21
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-70 Score=688.58 Aligned_cols=482 Identities=24% Similarity=0.366 Sum_probs=359.6
Q ss_pred ceEEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------
Q 000755 615 TAIEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 680 (1300)
..++++|++++|.... ..++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3699999999996322 34799999999999999999999999999999999999999999998754
Q ss_pred --------------eEEEEecCC--cCC-CCCHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccc
Q 000755 681 --------------TKAYVAQSP--WIQ-SGNIEDNILFGKP----MDR----EKYDRVLEACSLKKDLEILSFGDQTVI 735 (1300)
Q Consensus 681 --------------~~ayv~Q~~--~l~-~~Ti~eNI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~i 735 (1300)
.++||+|+| -++ ..||.|||.++.. .+. ++..++++..++.+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~~ 162 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTIL 162 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhHH
Confidence 379999998 354 4699999987521 222 234444544444210 1223
Q ss_pred cCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCcccc-CCEEEE
Q 000755 736 GERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLPA-ADLILV 812 (1300)
Q Consensus 736 ge~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~~-~d~i~~ 812 (1300)
.....+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+ ++..+. + ++|+|+|||+++.+.. ||+|++
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~-ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQ-LIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 55677899999999999999999999999999999999999888875 555543 3 7899999999998765 999999
Q ss_pred EeCCeEEEecChHHHHhcCc-hHHH-HHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchh
Q 000755 813 MKDGKITQAGKYNDILNSGT-DFMV-LVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVD 890 (1300)
Q Consensus 813 l~~G~i~~~g~~~~l~~~~~-~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~ 890 (1300)
|++|+|++.|++++++.... .|.. +.. ..
T Consensus 242 l~~G~i~~~g~~~~~~~~~~~~~~~~l~~-------~~------------------------------------------ 272 (623)
T PRK10261 242 MYQGEAVETGSVEQIFHAPQHPYTRALLA-------AV------------------------------------------ 272 (623)
T ss_pred eeCCeecccCCHHHhhcCCCChhhhhhhh-------cc------------------------------------------
Confidence 99999999999988754221 0000 000 00
Q ss_pred hhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Q 000755 891 EQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSL 970 (1300)
Q Consensus 891 ~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 970 (1300)
| ...+ ..| . .
T Consensus 273 --------------------~---~~~~-~~~--------~---------------~----------------------- 282 (623)
T PRK10261 273 --------------------P---QLGA-MKG--------L---------------D----------------------- 282 (623)
T ss_pred --------------------C---cccc-ccc--------c---------------c-----------------------
Confidence 0 0000 000 0 0
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCccccCCCCCCC
Q 000755 971 TFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISS-EPPLVIEESRPDCSW 1049 (1300)
Q Consensus 971 ~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~-e~~~~~~~~~~~~~w 1049 (1300)
.+ +.. ++.. ...+. +.+...... .+
T Consensus 283 -----------~~-~~~------------------------------------~~~~--~~~~~~~~~~~~~~~-~~--- 308 (623)
T PRK10261 283 -----------YP-RRF------------------------------------PLIS--LEHPAKQEPPIEQDT-VV--- 308 (623)
T ss_pred -----------CC-ccc------------------------------------cccc--cccccccCccccccc-cc---
Confidence 00 000 0000 00000 000000000 00
Q ss_pred CCCceEEEEeeeeeeCCC---------CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeec
Q 000755 1050 PTHGEVDILNLQVRYAPH---------LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINI 1120 (1300)
Q Consensus 1050 p~~g~i~~~~v~~~y~~~---------~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di 1120 (1300)
+....++++|+++.|+.. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++
T Consensus 309 ~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i 388 (623)
T PRK10261 309 DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRI 388 (623)
T ss_pred CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEEC
Confidence 112359999999999621 13589999999999999999999999999999999999999999999999999
Q ss_pred CCCCHH---HHhcccEEEcCCC--CCCcc-cHHHhcCC-C---CCCC----HHHHHHHHHHcCCc-HHHHhhcCCCcccc
Q 000755 1121 SSIGLH---DLRSRLSIIPQDP--TMFEG-TVRNNLDP-L---EEYK----DEEIWEALDKCQLG-DEVRNKEGKLDSRV 1185 (1300)
Q Consensus 1121 ~~i~~~---~lr~~i~~vpQ~~--~lf~g-Tvr~Nl~~-~---~~~~----d~~i~~~l~~~~l~-~~i~~~~~gLdt~v 1185 (1300)
...+.. .+|++++||||+| .++.. ||.+|+.. . .... ++++.++|+.+++. +...+.
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~-------- 460 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRY-------- 460 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCC--------
Confidence 876543 3567899999998 36654 99999852 1 1111 24567788888885 333332
Q ss_pred ccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEE
Q 000755 1186 TENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLL 1262 (1300)
Q Consensus 1186 ~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl 1262 (1300)
...||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|
T Consensus 461 ---~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl 537 (623)
T PRK10261 461 ---PHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVM 537 (623)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 356899999999999999999999999999999999999999999988643 6899999999999987 9999999
Q ss_pred eCCEEEEecChhhHHhcCCChHH-HHHH
Q 000755 1263 SHGIIEEYDSPTKLLENKSSSFA-QLVA 1289 (1300)
Q Consensus 1263 ~~G~i~e~g~~~~l~~~~~~~f~-~l~~ 1289 (1300)
++|+|++.|++++++.++...|. .++.
T Consensus 538 ~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 538 YLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred ECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 99999999999999876655454 3444
No 22
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-70 Score=654.36 Aligned_cols=402 Identities=26% Similarity=0.356 Sum_probs=349.9
Q ss_pred hhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Q 000755 890 DEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSS 969 (1300)
Q Consensus 890 ~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~ 969 (1300)
..++|-+..|++.+....+-+...+...|.+++++|+|+|+.|+.-.+++.+.++.-.+.......+...+....++.+.
T Consensus 304 ~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~ 383 (716)
T KOG0058|consen 304 VAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGN 383 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHh
Confidence 45677777788888888888889999999999999999999998777777666655444443333333333333344444
Q ss_pred HHHHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCC
Q 000755 970 LTFAFSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCS 1048 (1300)
Q Consensus 970 ~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~ 1048 (1300)
+....++.. ...+..|.+++|....++.|...+...+.++...+.++-+.+.|.+|++||++.++.-+.. ....| .
T Consensus 384 ~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~--G~~~p-~ 460 (716)
T KOG0058|consen 384 LAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT--GTLAP-D 460 (716)
T ss_pred HHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC--Ccccc-c
Confidence 443333333 3456788999999999999999999999999999999999999999999999976544322 11111 1
Q ss_pred CCCCceEEEEeeeeeeCCC-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH
Q 000755 1049 WPTHGEVDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD 1127 (1300)
Q Consensus 1049 wp~~g~i~~~~v~~~y~~~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~ 1127 (1300)
.-+|.|+|+||+|.|+.+ ..+||||+||+|+|||+||+|||||+||||++++|.|+|+|++|+|.+||+||++++.+.
T Consensus 461 -~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~ 539 (716)
T KOG0058|consen 461 -HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKY 539 (716)
T ss_pred -cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHH
Confidence 458999999999999765 236999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1128 LRSRLSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
||++||+|.|||.||++||+|||.+. ...+||+|..|.++++.++||.++|+|+||.|||.|..||||||||+||||||
T Consensus 540 lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARAL 619 (716)
T KOG0058|consen 540 LRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARAL 619 (716)
T ss_pred HHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHH
Confidence 99999999999999999999999865 46899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHH
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQ 1286 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~ 1286 (1300)
++||+|||||||||+||.++|..++++|.+..+++|||+||||++|++.+|+|+|+++|+|+|.|+|+||+++++|.|++
T Consensus 620 lr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly~~ 699 (716)
T KOG0058|consen 620 LRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNGLYAK 699 (716)
T ss_pred hcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcccHHHH
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999998899999
Q ss_pred HHHHHhhhc
Q 000755 1287 LVAEYTQRS 1295 (1300)
Q Consensus 1287 l~~~~~~~~ 1295 (1300)
|++++....
T Consensus 700 Lv~~q~~~~ 708 (716)
T KOG0058|consen 700 LVQRQLDSG 708 (716)
T ss_pred HHHHhcccC
Confidence 999876543
No 23
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5.1e-70 Score=675.25 Aligned_cols=450 Identities=24% Similarity=0.414 Sum_probs=349.4
Q ss_pred eEEEEeEEEEecCC-CCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC---------
Q 000755 616 AIEIVDGNFAWDIS-SNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG--------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 680 (1300)
.++++|++++|+.. ..+++|+|+||+|++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 135799999999999999999999999999999999999986 799998865
Q ss_pred --------eEEEEecCCc--CC-CCCHHHHHhcCC----CCC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCC
Q 000755 681 --------TKAYVAQSPW--IQ-SGNIEDNILFGK----PMD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGIN 741 (1300)
Q Consensus 681 --------~~ayv~Q~~~--l~-~~Ti~eNI~fg~----~~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~ 741 (1300)
.++|++|+|. ++ ..|+++|+.++. ..+ .++.+++++.+++.+.. ........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 3799999985 33 358999987421 122 23445556655553211 012445678
Q ss_pred CCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeE
Q 000755 742 LSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKI 818 (1300)
Q Consensus 742 LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i 818 (1300)
||||||||++|||||+.+|+++||||||++||+.+.+.+.+ ++..+. .++|+|+|||+++.+.. ||+|++|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i 235 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQ-LLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRC 235 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHH-HHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999988875 454442 37899999999998765 999999999999
Q ss_pred EEecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHH
Q 000755 819 TQAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSA 898 (1300)
Q Consensus 819 ~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~ 898 (1300)
++.|+++++...... . + .
T Consensus 236 ~~~g~~~~~~~~~~~--~---------------------------------------------------------~---~ 253 (529)
T PRK15134 236 VEQNRAATLFSAPTH--P---------------------------------------------------------Y---T 253 (529)
T ss_pred EEeCCHHHHhhCCCC--H---------------------------------------------------------H---H
Confidence 999988776431100 0 0 0
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVL 978 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 978 (1300)
+ .+.
T Consensus 254 ----------------------------~------~~~------------------------------------------ 257 (529)
T PRK15134 254 ----------------------------Q------KLL------------------------------------------ 257 (529)
T ss_pred ----------------------------H------HHH------------------------------------------
Confidence 0 000
Q ss_pred HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEE
Q 000755 979 LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDIL 1058 (1300)
Q Consensus 979 ~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~ 1058 (1300)
+. .+...+. ..++ +....|+++
T Consensus 258 --------------------------------------~~-------------~~~~~~~----~~~~---~~~~~l~~~ 279 (529)
T PRK15134 258 --------------------------------------NS-------------EPSGDPV----PLPE---PASPLLDVE 279 (529)
T ss_pred --------------------------------------Hh-------------Ccccccc----ccCC---CCCCccccc
Confidence 00 0000000 0000 012258999
Q ss_pred eeeeeeCC---------CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH--
Q 000755 1059 NLQVRYAP---------HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD-- 1127 (1300)
Q Consensus 1059 ~v~~~y~~---------~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~-- 1127 (1300)
|++++|+. +...+|+|+||+|++||++||+||||||||||+++|+|++ |++|+|.+||.++...+..+
T Consensus 280 ~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~ 358 (529)
T PRK15134 280 QLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLNRRQLL 358 (529)
T ss_pred CcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccchhhHH
Confidence 99999952 1246999999999999999999999999999999999998 48999999999987766543
Q ss_pred -HhcccEEEcCCC--CCCcc-cHHHhcCCC---C--CCC----HHHHHHHHHHcCCcH-HHHhhcCCCccccccCCCCCC
Q 000755 1128 -LRSRLSIIPQDP--TMFEG-TVRNNLDPL---E--EYK----DEEIWEALDKCQLGD-EVRNKEGKLDSRVTENGENWS 1193 (1300)
Q Consensus 1128 -lr~~i~~vpQ~~--~lf~g-Tvr~Nl~~~---~--~~~----d~~i~~~l~~~~l~~-~i~~~~~gLdt~v~e~G~~LS 1193 (1300)
+|++++|+||++ .+|.. |+++|+... . ... ++.+.++++.+++.+ ...+ ...+||
T Consensus 359 ~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LS 427 (529)
T PRK15134 359 PVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHR-----------YPAEFS 427 (529)
T ss_pred HhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhc-----------CCccCC
Confidence 467899999998 36654 999998531 1 111 234667888888752 3222 335789
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEe
Q 000755 1194 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1194 gGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~ 1270 (1300)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.
T Consensus 428 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 507 (529)
T PRK15134 428 GGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQ 507 (529)
T ss_pred HHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998642 6899999999999987 999999999999999
Q ss_pred cChhhHHhcCCC
Q 000755 1271 DSPTKLLENKSS 1282 (1300)
Q Consensus 1271 g~~~~l~~~~~~ 1282 (1300)
|+++++++++..
T Consensus 508 ~~~~~~~~~~~~ 519 (529)
T PRK15134 508 GDCERVFAAPQQ 519 (529)
T ss_pred cCHHHHhcCCCC
Confidence 999999875443
No 24
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=5.8e-67 Score=655.87 Aligned_cols=547 Identities=22% Similarity=0.266 Sum_probs=432.0
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 289 KLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVA 368 (1300)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 368 (1300)
+.++.+++.+++.+++..++.++..++.++.|++++.++|.+-....... ...+++.+++..++..+......+...++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 7 AALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGL-LNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667778888888889999999999999999999997432221111 11122223333334445555566777889
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000755 369 GIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALL-ILYKNLGLASIAA 446 (1300)
Q Consensus 369 g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~-lL~~~lg~~~l~~ 446 (1300)
+.++...++..+|+|.++++...+++.+.|++++++++|++.+.+++. .+..++...+.++++++ +++..+.++.++.
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999988999999999999999999988754 33343444444444433 3334444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 447 LFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMT 526 (1300)
Q Consensus 447 l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 526 (1300)
+.+++.+.+..++.+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+..+...+...+........
T Consensus 166 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 166 -LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444557777888888889999999999999999999999999999988888765443333322222111111
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000755 527 SFVF--WGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 527 ~~~~--~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 604 (1300)
.... ......+.++.++++.+..+.++.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 1111 11122344456677888889999999999999999999999999999999999999999999999765432211
Q ss_pred ccCC-CCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---
Q 000755 605 VEKH-PRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--- 680 (1300)
Q Consensus 605 ~~~~-~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--- 680 (1300)
.... ........|+++|++|+|+.++++++|+|+||+++|||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i 404 (576)
T TIGR02204 325 AHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDL 404 (576)
T ss_pred CCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEH
Confidence 1111 111123469999999999754346899999999999999999999999999999999999999999999998
Q ss_pred ----------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 ----------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 ----------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++||||+|++|++||+|||.+|.| .++++.+++++.+++.++++.+|.|++|.+||+|.+||||||||
T Consensus 405 ~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qr 484 (576)
T TIGR02204 405 RQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQR 484 (576)
T ss_pred HhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHH
Confidence 3699999999999999999999886 57889999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
++||||++++|++++||||||+||+++++.+++ .+....+++|+|+|||+++.++.||+|++|++|++++.|+++++.+
T Consensus 485 l~laRal~~~~~ililDEpts~lD~~~~~~i~~-~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 485 IAIARAILKDAPILLLDEATSALDAESEQLVQQ-ALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHhCCCeEEEeCcccccCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 999999999999999999999999999888765 5566667899999999999999999999999999999999999998
Q ss_pred cCchHHHHH
Q 000755 830 SGTDFMVLV 838 (1300)
Q Consensus 830 ~~~~~~~l~ 838 (1300)
.++.|.++.
T Consensus 564 ~~~~~~~l~ 572 (576)
T TIGR02204 564 KGGLYARLA 572 (576)
T ss_pred cCChHHHHH
Confidence 888887765
No 25
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.5e-67 Score=652.84 Aligned_cols=542 Identities=21% Similarity=0.263 Sum_probs=421.6
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 293 ALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLN-GERE--FKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAG 369 (1300)
Q Consensus 293 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~-~~~~--~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g 369 (1300)
.+++.+++.++++.++.++..++..+.|++++.+++... .... ........++++++..++..++.....+...+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (574)
T PRK11160 9 KLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDAT 88 (574)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888999999999999999999999999642 2110 0011111122333344455666666667788899
Q ss_pred HHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000755 370 IKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALL-ILYKNLGLASIAAL 447 (1300)
Q Consensus 370 ~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~-lL~~~lg~~~l~~l 447 (1300)
.++...++..+|+|.++++...+++.++|++++++++|++.+++++.. +..+....+.++++++ +++..+.++.++.+
T Consensus 89 ~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~ 168 (574)
T PRK11160 89 FRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGG 168 (574)
T ss_pred HHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999997654 3333444444444333 33444444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 448 FATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTS 527 (1300)
Q Consensus 448 ~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 527 (1300)
++.++.+++...+.++.++..++.++..++..+.+.|.++|+++||.|+.|+.+.+++.+..++-.+...+.........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (574)
T PRK11160 169 ILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQ 248 (574)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222233334556777777888888899999999999999999999999999888886654433332222222222111
Q ss_pred HH-HHHH-HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000755 528 FV-FWGA-PTFVSVATFGACMLLGIPLESGKILSALATFRI-LQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 528 ~~-~~~~-p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~-l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 604 (1300)
.+ .... ...+.++.++++. .++.++.|.+++++.+... ...|+..++..+..+.+++.|.+||.++++.++..+..
T Consensus 249 ~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~ 327 (574)
T PRK11160 249 ALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFP 327 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 1111 1222334455555 4678899998887766544 45788999999999999999999999999765432211
Q ss_pred ccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe---
Q 000755 605 VEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 681 (1300)
Q Consensus 605 ~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--- 681 (1300)
... ........|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 328 ~~~-~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~ 405 (574)
T PRK11160 328 TTS-TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIA 405 (574)
T ss_pred ccc-CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhh
Confidence 111 111223579999999999742 357999999999999999999999999999999999999999999999984
Q ss_pred ----------EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 ----------KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 ----------~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
++||+|+|++|++||+|||.+|.+ .++++++++++.++++++++. |+|++|.+||+|.+|||||||||
T Consensus 406 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRi 484 (574)
T PRK11160 406 DYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRL 484 (574)
T ss_pred hCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHH
Confidence 699999999999999999999986 688999999999999999999 99999999999999999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
+||||++++|+|++||||||+||+++++.+.+ .+....+++|+|+||||++.++.||+|++|++|++++.|+|+|+++.
T Consensus 485 alARall~~~~ililDE~ts~lD~~t~~~i~~-~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 563 (574)
T PRK11160 485 GIARALLHDAPLLLLDEPTEGLDAETERQILE-LLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ 563 (574)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc
Confidence 99999999999999999999999999998865 56666679999999999999999999999999999999999999999
Q ss_pred CchHHHHHH
Q 000755 831 GTDFMVLVG 839 (1300)
Q Consensus 831 ~~~~~~l~~ 839 (1300)
++.|.++..
T Consensus 564 ~g~y~~l~~ 572 (574)
T PRK11160 564 QGRYYQLKQ 572 (574)
T ss_pred CcHHHHHHh
Confidence 988887753
No 26
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-70 Score=671.20 Aligned_cols=438 Identities=23% Similarity=0.359 Sum_probs=341.6
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC--CccEEEEcCe------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK--ISGTLKLCGT------------ 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~i~~~g~------------ 681 (1300)
.++++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|.++| ++|+|.++|.
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 489999999995 35799999999999999999999999999999999999996 8999999762
Q ss_pred --EEEEecCCcCCC-CCHHHHHhcCCC------CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 682 --KAYVAQSPWIQS-GNIEDNILFGKP------MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 682 --~ayv~Q~~~l~~-~Ti~eNI~fg~~------~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
++||+|++.++. .|++||+.++.. .+.+ +.+++++..++ .........+|||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgGqkq 150 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKL-----------DINPATPVGNLGLGQQQ 150 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCC-----------CCCcccchhhCCHHHHH
Confidence 799999998765 599999998743 1222 22223333222 22335566789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
|++||||++.+|+++||||||++||+.+...+++ .+..+ .+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 151 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 229 (506)
T PRK13549 151 LVEIAKALNKQARLLILDEPTASLTESETAVLLD-IIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAG 229 (506)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeeccccc
Confidence 9999999999999999999999999999988875 44443 357899999999999875 99999999999998886544
Q ss_pred HHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHh
Q 000755 827 ILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVG 906 (1300)
Q Consensus 827 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~ 906 (1300)
+... .. +
T Consensus 230 ~~~~-----~~---------------------------------------------------------------~----- 236 (506)
T PRK13549 230 MTED-----DI---------------------------------------------------------------I----- 236 (506)
T ss_pred CCHH-----HH---------------------------------------------------------------H-----
Confidence 3100 00 0
Q ss_pred hhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000755 907 VCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGV 986 (1300)
Q Consensus 907 ~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~ 986 (1300)
+.. + +.
T Consensus 237 -----------~~~--------~-------------------------------------------------------~~ 242 (506)
T PRK13549 237 -----------TMM--------V-------------------------------------------------------GR 242 (506)
T ss_pred -----------HHh--------h-------------------------------------------------------Cc
Confidence 000 0 00
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCC
Q 000755 987 IEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAP 1066 (1300)
Q Consensus 987 ~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~ 1066 (1300)
.. .+ . .+.++ ++ +....|+++|++++|+.
T Consensus 243 -~~----------------------------------~~---~--~~~~~--------~~---~~~~~l~~~~l~~~~~~ 271 (506)
T PRK13549 243 -EL----------------------------------TA---L--YPREP--------HT---IGEVILEVRNLTAWDPV 271 (506)
T ss_pred -Cc----------------------------------cc---c--ccccc--------cC---CCCceEEEecCcccccc
Confidence 00 00 0 00000 00 11235999999999952
Q ss_pred -CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-CCcceEEECCeecCCCCH-HHHhcccEEEcCCC---C
Q 000755 1067 -HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-PTAGEIVIDGINISSIGL-HDLRSRLSIIPQDP---T 1140 (1300)
Q Consensus 1067 -~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-p~~G~I~idg~di~~i~~-~~lr~~i~~vpQ~~---~ 1140 (1300)
+..++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+. +..|.+++|+||++ .
T Consensus 272 ~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 351 (506)
T PRK13549 272 NPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDG 351 (506)
T ss_pred ccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCC
Confidence 12359999999999999999999999999999999999999 599999999999865543 34567899999996 3
Q ss_pred CCc-ccHHHhcCCC--CC------CC----HHHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1141 MFE-GTVRNNLDPL--EE------YK----DEEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1141 lf~-gTvr~Nl~~~--~~------~~----d~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+|. .|+.+|+... .. .. .+++.++++++++. +.. ......||||||||++||||+
T Consensus 352 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LSgG~kqrv~lA~al 420 (506)
T PRK13549 352 IVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASP-----------ELAIARLSGGNQQKAVLAKCL 420 (506)
T ss_pred CcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCc-----------ccccccCCHHHHHHHHHHHHH
Confidence 565 4999998632 11 11 12456677777763 221 223457999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||++++|++|+++..|+++++.
T Consensus 421 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 421 LLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred hhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 99999999999999999999999999998764 47899999999999987 9999999999999999888764
No 27
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.8e-67 Score=650.76 Aligned_cols=505 Identities=20% Similarity=0.214 Sum_probs=389.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 292 KALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIK 371 (1300)
Q Consensus 292 ~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ 371 (1300)
+.+++.+++.++...++.++..++..+.|++++.++|.+..... ....+.+++++++..++..+......+...+.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (529)
T TIGR02868 5 LPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALR 83 (529)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677778888888899999999999999999997653221 11111111112223344555555556667788889
Q ss_pred HHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000755 372 MRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLI-LYKNLGLASIAALFA 449 (1300)
Q Consensus 372 ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~l-L~~~lg~~~l~~l~~ 449 (1300)
+...++..+|+|.++++...++++++|+++|++++|++.+.+++.. +..+....+.+++++++ ++..+.++ ++.++.
T Consensus 84 ~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-l~~l~~ 162 (529)
T TIGR02868 84 SLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAA-LVLAAG 162 (529)
T ss_pred HHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHH
Confidence 9999999999999999999999999999999999999999987654 33334334433334333 33333333 232332
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 450 TVLIMLT-NFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSF 528 (1300)
Q Consensus 450 ~~l~~~~-~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~ 528 (1300)
++++.++ .....+..++..++..+..++..+.+.|.++|+++||.|++|+.+.+++.+..+...+...+..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (529)
T TIGR02868 163 LLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAA 242 (529)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222 233334445556677788899999999999999999999999999999877655444433333322222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 000755 529 VFWGAP--TFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVE 606 (1300)
Q Consensus 529 ~~~~~p--~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~ 606 (1300)
+..... ..+.++.++.+.+.++.++.|.+.+++.+...+..|+..++..+..+.+++++.+|+.++++.++..+....
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 322 (529)
T TIGR02868 243 AQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV 322 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 222222 223344567777788899999999999999999999999999999999999999999999976653221111
Q ss_pred CC--CCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----
Q 000755 607 KH--PRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---- 680 (1300)
Q Consensus 607 ~~--~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---- 680 (1300)
.. +.......|+++|++|+|++ ++++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|
T Consensus 323 ~~~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~ 400 (529)
T TIGR02868 323 PAAGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVS 400 (529)
T ss_pred CCCcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhh
Confidence 00 01112346999999999973 24799999999999999999999999999999999999999999999998
Q ss_pred --------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 681 --------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 681 --------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
.++||||+|++|++||+|||.+|.| .++++++++++.|+++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 401 ~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRia 480 (529)
T TIGR02868 401 SLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLA 480 (529)
T ss_pred hHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHH
Confidence 6899999999999999999999976 6899999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCC
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQV 801 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~ 801 (1300)
||||++++|+|+||||||||||+++++.|.+. +....+++|+|+||||+
T Consensus 481 iARall~~~~iliLDE~TSaLD~~te~~I~~~-l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 481 LARALLADAPILLLDEPTEHLDAGTESELLED-LLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999765 45666899999999985
No 28
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-70 Score=670.53 Aligned_cols=436 Identities=21% Similarity=0.342 Sum_probs=339.0
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------e
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 681 (1300)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 489999999995 35799999999999999999999999999999999999999999999876 2
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC----------CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP----------MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~----------~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
++||+|++.++. .|++||+.++.. .+. ++..++++.+++. ........+|||||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgG~ 150 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLK-----------VDLDEKVANLSISH 150 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCC-----------CCcccchhhCCHHH
Confidence 799999987765 599999987632 011 1223333333332 22345667899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecCh
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY 824 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 824 (1300)
|||++|||||+.+|+++||||||++||+.+...+.+ .+..+ .+++|+|+|||+++++.. ||+|++|++|++++.|++
T Consensus 151 ~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (510)
T PRK09700 151 KQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFL-IMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMV 229 (510)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecch
Confidence 999999999999999999999999999999988875 44443 347999999999999875 999999999999998887
Q ss_pred HHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHH
Q 000755 825 NDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRL 904 (1300)
Q Consensus 825 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl 904 (1300)
+++... ...
T Consensus 230 ~~~~~~-----~~~------------------------------------------------------------------ 238 (510)
T PRK09700 230 SDVSND-----DIV------------------------------------------------------------------ 238 (510)
T ss_pred hhCCHH-----HHH------------------------------------------------------------------
Confidence 664210 000
Q ss_pred HhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000755 905 VGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPK 984 (1300)
Q Consensus 905 ~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~ 984 (1300)
+.+ ++.
T Consensus 239 -------------~~~--------~~~----------------------------------------------------- 244 (510)
T PRK09700 239 -------------RLM--------VGR----------------------------------------------------- 244 (510)
T ss_pred -------------HHh--------cCC-----------------------------------------------------
Confidence 000 000
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeee
Q 000755 985 GVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRY 1064 (1300)
Q Consensus 985 g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y 1064 (1300)
... .+ + +...+ ...++ +....++++|+++.|
T Consensus 245 -~~~-----------------------------------~~---~---~~~~~----~~~~~---~~~~~l~~~~l~~~~ 275 (510)
T PRK09700 245 -ELQ-----------------------------------NR---F---NAMKE----NVSNL---AHETVFEVRNVTSRD 275 (510)
T ss_pred -Ccc-----------------------------------cc---c---ccccc----ccccC---CCCcEEEEeCccccC
Confidence 000 00 0 00000 00000 112369999999876
Q ss_pred CCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH-HHHhcccEEEcCCC---C
Q 000755 1065 APHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL-HDLRSRLSIIPQDP---T 1140 (1300)
Q Consensus 1065 ~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~-~~lr~~i~~vpQ~~---~ 1140 (1300)
. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++++|+||++ .
T Consensus 276 ~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 351 (510)
T PRK09700 276 R----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNG 351 (510)
T ss_pred C----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCC
Confidence 3 28999999999999999999999999999999999999999999999999865543 35677899999984 5
Q ss_pred CCcc-cHHHhcCCCCC------------CC----HHHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCChhHHHHHHH
Q 000755 1141 MFEG-TVRNNLDPLEE------------YK----DEEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSMGQRQLVCL 1202 (1300)
Q Consensus 1141 lf~g-Tvr~Nl~~~~~------------~~----d~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~L 1202 (1300)
+|+. |+++|+..... .. .+++.++++++++. +. . ......||||||||++|
T Consensus 352 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~~LSgGq~qrv~l 420 (510)
T PRK09700 352 FFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHS-------V----NQNITELSGGNQQKVLI 420 (510)
T ss_pred CcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCC-------c----cCccccCChHHHHHHHH
Confidence 6765 99999864211 01 12355667777663 22 2 22345699999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1203 GRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1203 ARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
||||+.+|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.+++.+
T Consensus 421 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 421 SKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 999999999999999999999999999999998764 47899999999999887 99999999999999887633
No 29
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.1e-66 Score=651.27 Aligned_cols=538 Identities=24% Similarity=0.343 Sum_probs=422.9
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 293 ALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKM 372 (1300)
Q Consensus 293 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~i 372 (1300)
.+++ ++ .++...++.++..++....|+++..+++.+... ......+...+++..++..+......+.....+.++
T Consensus 9 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 83 (567)
T COG1132 9 KYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD---LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKI 83 (567)
T ss_pred HHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 67 788888888999999999999999999987611 111111222222222234444444555566667889
Q ss_pred HHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000755 373 RSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPWL-VILQVSLALLILYK-NLGLASIAALFAT 450 (1300)
Q Consensus 373 r~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~-~~l~i~~~l~lL~~-~lg~~~l~~l~~~ 450 (1300)
...++..+|+|.++++...++++++|++++++++|++.+..++.....+.. .++.++..+++++. .+-++ ++.+++.
T Consensus 84 ~~~lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~~~~~~ 162 (567)
T COG1132 84 VADLRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLA-LILLLIL 162 (567)
T ss_pred HHHHHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHH
Confidence 999999999999999999999999999999999999999998766533333 33333333333332 23233 3333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000755 451 VLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWL-KKFLYTGAMTSFV 529 (1300)
Q Consensus 451 ~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l-~~~~~~~~~~~~~ 529 (1300)
+++..+...+.++.++...+..+..++..+.+.|.++|+++||.|+.|+...++..+..+...+.. +............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T COG1132 163 PLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLM 242 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455565567888888888899999999999999999999999977666554433222221 1111111111111
Q ss_pred H-HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC
Q 000755 530 F-WGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKH 608 (1300)
Q Consensus 530 ~-~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~ 608 (1300)
. ...-..+.++.++.+.+..+.++.|.+.+++.++..+..|+..+...+..+.++..|.+|+.++++.++...+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~- 321 (567)
T COG1132 243 LLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC-
Confidence 1 12222344455666777788899999999999999999999999999999999999999999999875532221111
Q ss_pred CCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------
Q 000755 609 PRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------- 681 (1300)
Q Consensus 609 ~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------- 681 (1300)
.......|+++|++|+|++ ++++|+|+||++++||++|||||+|||||||+++|+|+++|++|+|.+||.
T Consensus 322 -~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~ 398 (567)
T COG1132 322 -LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISL 398 (567)
T ss_pred -CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCH
Confidence 1223456999999999974 468999999999999999999999999999999999999999999999883
Q ss_pred ------EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 682 ------KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 682 ------~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
++||+|+|++|++||+|||.+|+| .++|+..++++.++++++++.+|+|++|.+||+|.+|||||||||+|||
T Consensus 399 ~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiAR 478 (567)
T COG1132 399 DSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIAR 478 (567)
T ss_pred HHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHH
Confidence 699999999999999999999998 6999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchH
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDF 834 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 834 (1300)
|+++||+|++||||||+||+++++.|.+. +..+.++||+|+|+||++.+..||+|+||++|+|++.|+|+||++.++.|
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~-l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y 557 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDA-LKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLY 557 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHH-HHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHH
Confidence 99999999999999999999999988654 55566889999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 000755 835 MVLVGAH 841 (1300)
Q Consensus 835 ~~l~~~~ 841 (1300)
.+++..+
T Consensus 558 ~~l~~~~ 564 (567)
T COG1132 558 ARLYQAQ 564 (567)
T ss_pred HHHHHHh
Confidence 9887654
No 30
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.5e-66 Score=663.88 Aligned_cols=546 Identities=21% Similarity=0.244 Sum_probs=440.2
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 288 FKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQV 367 (1300)
Q Consensus 288 ~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 367 (1300)
.+.++..++.+++.+....++.++..++.++.|++++.++|.+-.... ....+.+++++++..++..++.....+...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~-~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~ 205 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG-LSTLSVLALAMLAVAIFEPALGGLRTYLFAH 205 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667788888888899999999999999999999997753222 1222334444555555666777777777888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000755 368 AGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALL-ILYKNLGLASIA 445 (1300)
Q Consensus 368 ~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~-lL~~~lg~~~l~ 445 (1300)
++.++...++..+|+|.++++...+++.++|++++++ +|++.+.+++. .+.......+.+++.++ +++..+.+ +++
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~li 283 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTL-TGV 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999999999999999999 69999998753 23333333333333333 33433333 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 446 ALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAM 525 (1300)
Q Consensus 446 ~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~ 525 (1300)
.++++++..++..++.+..++..++.++..+++.+.+.|.++|+++||.++.|+.+.+++.+..+...+...+.......
T Consensus 284 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR01846 284 VIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNI 363 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555556666777778888888889999999999999999999999999999988876544433333332222222
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000755 526 TSFVFWGA--PTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSD 603 (1300)
Q Consensus 526 ~~~~~~~~--p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 603 (1300)
........ ...+.++.+|++.+..+.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+.
T Consensus 364 ~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 443 (694)
T TIGR01846 364 AGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRS 443 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC
Confidence 22211111 1223456678888888999999999999999999999999999999999999999999999987654322
Q ss_pred cccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--
Q 000755 604 VVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-- 681 (1300)
Q Consensus 604 ~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-- 681 (1300)
. ...+.......|+++|++|+|+++ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 444 ~-~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i 521 (694)
T TIGR01846 444 A-GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDL 521 (694)
T ss_pred C-CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeh
Confidence 1 111111224579999999999743 457999999999999999999999999999999999999999999999984
Q ss_pred -----------EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 682 -----------KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 682 -----------~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
++||+|+|++|++||+|||.++.+ .++++..++++.++++++++.+|+|++|.+||+|.+||||||||
T Consensus 522 ~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qr 601 (694)
T TIGR01846 522 AIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQR 601 (694)
T ss_pred hhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHH
Confidence 599999999999999999999876 68899999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|+||||++++|+|+|||||||+||+++++.+.+. +....+++|+|+||||++.++.||+|++|++|+|++.|+++++++
T Consensus 602 i~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 602 IAIARALVGNPRILIFDEATSALDYESEALIMRN-MREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred HHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 9999999999999999999999999999998764 555567899999999999999999999999999999999999999
Q ss_pred cCchHHHHHH
Q 000755 830 SGTDFMVLVG 839 (1300)
Q Consensus 830 ~~~~~~~l~~ 839 (1300)
.++.|.++..
T Consensus 681 ~~~~y~~l~~ 690 (694)
T TIGR01846 681 LQGLYARLWQ 690 (694)
T ss_pred cCChHHHHHH
Confidence 8888888764
No 31
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3e-66 Score=650.02 Aligned_cols=540 Identities=19% Similarity=0.261 Sum_probs=422.6
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 293 ALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKM 372 (1300)
Q Consensus 293 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~i 372 (1300)
.+++.+++.+.+.+++.++..++.++.|+++..++|.+..... .. .+++.+++..++..+......+...++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK13657 12 QYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD---IF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRR 87 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888888889999999999999999999998764321 11 1111112222223333333445567778888
Q ss_pred HHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 373 RSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASIAALFATV 451 (1300)
Q Consensus 373 r~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~ 451 (1300)
+..++..+|+|.++++...+.+.+.|++++++++|++.+.+... .+.......+..++.+++++..-.+.+++.+++++
T Consensus 88 ~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~ 167 (588)
T PRK13657 88 RLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGI 167 (588)
T ss_pred HHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999976533 22233322222222222222222222333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q 000755 452 LIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKI----EAGWLKKFLYTGAMTS 527 (1300)
Q Consensus 452 l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~----E~~~l~~~~~~~~~~~ 527 (1300)
+...+...+.++.++.+++.++..++..+...|.++|+++||.|+.|+.+.+++.+.-+. +.+..+.......+..
T Consensus 168 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK13657 168 VYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNR 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566677788888888889999999999999999999999999999888777554332 2222211111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 000755 528 FVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEK 607 (1300)
Q Consensus 528 ~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 607 (1300)
.......+.+++++++.+..+.+|.|.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..+.....
T Consensus 248 --~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~ 325 (588)
T PRK13657 248 --AASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGA 325 (588)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC
Confidence 112223345567788888899999999999999999999999999999999999999999999998765432211111
Q ss_pred CCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------
Q 000755 608 HPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------- 680 (1300)
Q Consensus 608 ~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 680 (1300)
.+.......|+++|++|+|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 326 ~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~ 403 (588)
T PRK13657 326 IDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVT 403 (588)
T ss_pred CCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCC
Confidence 111112346999999999973 35799999999999999999999999999999999999999999999998
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
.++||||+|++|++||+|||.+++| .++++.+++++.++++++++.+|+|++|.+|++|.+|||||||||+||
T Consensus 404 ~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialA 483 (588)
T PRK13657 404 RASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIA 483 (588)
T ss_pred HHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHH
Confidence 4699999999999999999999975 678999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCch
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTD 833 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 833 (1300)
||++++|+|++||||||+||+++++.+++. +....+++|+|+||||++.++.||+|++|++|++++.|+++++++..+.
T Consensus 484 Rall~~~~iliLDEpts~LD~~t~~~i~~~-l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~ 562 (588)
T PRK13657 484 RALLKDPPILILDEATSALDVETEAKVKAA-LDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGR 562 (588)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCCh
Confidence 999999999999999999999999999764 4555578999999999999999999999999999999999999988888
Q ss_pred HHHHHHHH
Q 000755 834 FMVLVGAH 841 (1300)
Q Consensus 834 ~~~l~~~~ 841 (1300)
|.++....
T Consensus 563 y~~l~~~~ 570 (588)
T PRK13657 563 FAALLRAQ 570 (588)
T ss_pred HHHHHHHh
Confidence 88877543
No 32
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.2e-69 Score=666.16 Aligned_cols=437 Identities=23% Similarity=0.381 Sum_probs=342.0
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccc--cCCccEEEEc---------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV--PKISGTLKLC--------------- 679 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~--~~~~G~i~~~--------------- 679 (1300)
|+++|++++|+ ++++|+|+||++.+|++++|+|+||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 46899999995 357999999999999999999999999999999999997 7999999885
Q ss_pred --------C-----------------------eEEEEecC-CcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhc
Q 000755 680 --------G-----------------------TKAYVAQS-PWIQS-GNIEDNILFGKP---MD----REKYDRVLEACS 719 (1300)
Q Consensus 680 --------g-----------------------~~ayv~Q~-~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~ 719 (1300)
| .++|++|+ +.++. .|++||+.|+.. .+ .++..++++.++
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 1 26999997 55554 699999987531 22 234445566665
Q ss_pred chHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEE
Q 000755 720 LKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYV 797 (1300)
Q Consensus 720 l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlv 797 (1300)
+.... .....+||||||||++|||||+.+|+++||||||++||+++.+.+.+ .+..+. .++|||+|
T Consensus 158 l~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tviiv 225 (520)
T TIGR03269 158 LSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHN-ALEEAVKASGISMVLT 225 (520)
T ss_pred Chhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEE
Confidence 54322 34567899999999999999999999999999999999999998875 454443 37899999
Q ss_pred ecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCcccccccc
Q 000755 798 THQVEFLPA-ADLILVMKDGKITQAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVT 876 (1300)
Q Consensus 798 tH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~ 876 (1300)
||+++++.. ||+|++|++|+++..|+++++... .
T Consensus 226 tHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------~--------------------------------------- 260 (520)
T TIGR03269 226 SHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------F--------------------------------------- 260 (520)
T ss_pred eCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH------H---------------------------------------
Confidence 999999875 999999999999988877654210 0
Q ss_pred ccCccccccccchhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHH
Q 000755 877 MKEGNEDIQTDKVDEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGA 956 (1300)
Q Consensus 877 lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 956 (1300)
.+.
T Consensus 261 ----------------------------------------~~~------------------------------------- 263 (520)
T TIGR03269 261 ----------------------------------------MEG------------------------------------- 263 (520)
T ss_pred ----------------------------------------Hhh-------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 000755 957 MEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEP 1036 (1300)
Q Consensus 957 ~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~ 1036 (1300)
. .++.. + .+
T Consensus 264 ------------------------------~------------------------------------~~~~~----~-~~ 272 (520)
T TIGR03269 264 ------------------------------V------------------------------------SEVEK----E-CE 272 (520)
T ss_pred ------------------------------c------------------------------------hhhcc----c-cc
Confidence 0 00000 0 00
Q ss_pred CCccccCCCCCCCCCCceEEEEeeeeeeCC---CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceE
Q 000755 1037 PLVIEESRPDCSWPTHGEVDILNLQVRYAP---HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEI 1113 (1300)
Q Consensus 1037 ~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~---~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I 1113 (1300)
.+ +....++++|++++|+. +..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|
T Consensus 273 -------~~----~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i 341 (520)
T TIGR03269 273 -------VE----VGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEV 341 (520)
T ss_pred -------cC----CCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEE
Confidence 00 01236999999999953 22469999999999999999999999999999999999999999999
Q ss_pred EEC-Ce---ecCCCC---HHHHhcccEEEcCCCCCCcc-cHHHhcCCC-C-CC----CHHHHHHHHHHcCCcHHHHhhcC
Q 000755 1114 VID-GI---NISSIG---LHDLRSRLSIIPQDPTMFEG-TVRNNLDPL-E-EY----KDEEIWEALDKCQLGDEVRNKEG 1179 (1300)
Q Consensus 1114 ~id-g~---di~~i~---~~~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~-~-~~----~d~~i~~~l~~~~l~~~i~~~~~ 1179 (1300)
.++ |. ++...+ ...+|++++|+||++.+|.. |+++|+... . .. .++++.++++.+++.+.-
T Consensus 342 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----- 416 (520)
T TIGR03269 342 NVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK----- 416 (520)
T ss_pred EEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc-----
Confidence 996 64 333332 23456789999999988875 999998531 1 11 123466778888875310
Q ss_pred CCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-c
Q 000755 1180 KLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-S 1256 (1300)
Q Consensus 1180 gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~ 1256 (1300)
.+.........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.. |
T Consensus 417 -~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~ 495 (520)
T TIGR03269 417 -AEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVC 495 (520)
T ss_pred -chhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhC
Confidence 00001223457899999999999999999999999999999999999999999988642 6899999999999987 9
Q ss_pred CEEEEEeCCEEEEecChhhHHh
Q 000755 1257 DMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1257 D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||++|++|++++.|+++++.+
T Consensus 496 d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 496 DRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred CEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999988764
No 33
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.9e-69 Score=662.24 Aligned_cols=445 Identities=22% Similarity=0.352 Sum_probs=344.4
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------e
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 681 (1300)
.++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 11 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 599999999996 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCCCC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKPMD---REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~~~---~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
++|++|++.++. .|++||+.|+.... +++..++++..++.. .......+||||||||++|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQL-----------DLDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCc-----------cccCChhhCCHHHHHHHHHHHHHH
Confidence 789999998765 59999999875422 234444555554432 234556789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCchHH
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNSGTDFM 835 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 835 (1300)
.+|+++||||||++||+.+...+.+. +..+ .+++|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~---- 231 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD---- 231 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH----
Confidence 99999999999999999999988764 4443 347899999999998865 9999999999999999887753210
Q ss_pred HHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhhhhhHHHH
Q 000755 836 VLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVCKAPVIQH 915 (1300)
Q Consensus 836 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~ 915 (1300)
.... .
T Consensus 232 -~~~~---------------------------------------------------------------~----------- 236 (510)
T PRK15439 232 -IIQA---------------------------------------------------------------I----------- 236 (510)
T ss_pred -HHHH---------------------------------------------------------------H-----------
Confidence 0000 0
Q ss_pred HHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHH
Q 000755 916 FSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLA 995 (1300)
Q Consensus 916 ~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~ 995 (1300)
++.. ...+ .
T Consensus 237 -------------~~~~------------~~~~--------------------------------------~-------- 245 (510)
T PRK15439 237 -------------TPAA------------REKS--------------------------------------L-------- 245 (510)
T ss_pred -------------hCcc------------cccc--------------------------------------c--------
Confidence 0000 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCcceeee
Q 000755 996 VTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGL 1075 (1300)
Q Consensus 996 l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~i 1075 (1300)
.+.++. .+ ..|...+ .++ +....++++|++. .+|+|+
T Consensus 246 -------------------------~~~~~~-~~-~~~~~~~------~~~---~~~~~l~~~~l~~-------~~l~~i 282 (510)
T PRK15439 246 -------------------------SASQKL-WL-ELPGNRR------QQA---AGAPVLTVEDLTG-------EGFRNI 282 (510)
T ss_pred -------------------------cccccc-cc-ccccccc------ccC---CCCceEEEeCCCC-------CCccce
Confidence 000000 00 0000000 000 1123589999983 169999
Q ss_pred eEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH-HhcccEEEcCCC---CCCcc-cHHHhc
Q 000755 1076 TCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD-LRSRLSIIPQDP---TMFEG-TVRNNL 1150 (1300)
Q Consensus 1076 sl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~-lr~~i~~vpQ~~---~lf~g-Tvr~Nl 1150 (1300)
||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .|.+++|+||++ .+|.. |+.+|+
T Consensus 283 sl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l 362 (510)
T PRK15439 283 SLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNV 362 (510)
T ss_pred eEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHH
Confidence 9999999999999999999999999999999999999999999998776554 456899999986 36654 999997
Q ss_pred CCC-----CC--CC---HHHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 000755 1151 DPL-----EE--YK---DEEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEAT 1219 (1300)
Q Consensus 1151 ~~~-----~~--~~---d~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpT 1219 (1300)
... .. .. ++++.++++.+++. +. .......||||||||++|||||+.+|+||||||||
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt 431 (510)
T PRK15439 363 CALTHNRRGFWIKPARENAVLERYRRALNIKFNH-----------AEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPT 431 (510)
T ss_pred HhhhhhhhccccChHHHHHHHHHHHHHcCCCCCC-----------ccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCC
Confidence 421 00 01 12355667776653 21 22334679999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1220 ASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1220 s~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|+++..|+++++.++
T Consensus 432 ~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 432 RGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINVD 493 (510)
T ss_pred cCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCHH
Confidence 9999999999999998864 47899999999999987 999999999999999999887643
No 34
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.4e-69 Score=661.92 Aligned_cols=431 Identities=22% Similarity=0.362 Sum_probs=337.9
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------e
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 681 (1300)
.|+++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 489999999995 35799999999999999999999999999999999999999999999986 2
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC-------CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP-------MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~-------~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
++|++|++.++. .|++||+.|+.. .+.+ +..++++.+++. ........+||||||||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qr 149 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLR-----------FSSDKLVGELSIGEQQM 149 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHH
Confidence 699999987764 599999998743 1222 223333333332 22345567899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
++|||||..+|+++||||||++||+.+...+.+ .+..+ ..++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 150 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 150 VEIAKVLSFESKVIIMDEPTDALTDTETESLFR-VIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred HHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 999999999999999999999999999988875 44433 347899999999999865 999999999999987765432
Q ss_pred HhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhh
Q 000755 828 LNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGV 907 (1300)
Q Consensus 828 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~ 907 (1300)
... ..
T Consensus 229 ~~~-----~~---------------------------------------------------------------------- 233 (501)
T PRK10762 229 TED-----SL---------------------------------------------------------------------- 233 (501)
T ss_pred CHH-----HH----------------------------------------------------------------------
Confidence 100 00
Q ss_pred hhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 000755 908 CKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVI 987 (1300)
Q Consensus 908 ~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~ 987 (1300)
.+.. .+.
T Consensus 234 ---------~~~~---------------------------------------------------------------~~~- 240 (501)
T PRK10762 234 ---------IEMM---------------------------------------------------------------VGR- 240 (501)
T ss_pred ---------HHHh---------------------------------------------------------------cCC-
Confidence 0000 000
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCC
Q 000755 988 EPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPH 1067 (1300)
Q Consensus 988 ~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~ 1067 (1300)
+ .+...+. ...+ +....++++|+++
T Consensus 241 -------------------------------------~------~~~~~~~----~~~~---~~~~~l~~~~l~~----- 265 (501)
T PRK10762 241 -------------------------------------K------LEDQYPR----LDKA---PGEVRLKVDNLSG----- 265 (501)
T ss_pred -------------------------------------C------ccccccc----cccC---CCCcEEEEeCccc-----
Confidence 0 0000000 0000 1122589999984
Q ss_pred CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH-HHhcccEEEcCCC---CCCc
Q 000755 1068 LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH-DLRSRLSIIPQDP---TMFE 1143 (1300)
Q Consensus 1068 ~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~-~lr~~i~~vpQ~~---~lf~ 1143 (1300)
.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|++++|+||++ .+|.
T Consensus 266 --~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~ 343 (501)
T PRK10762 266 --PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVL 343 (501)
T ss_pred --CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcC
Confidence 279999999999999999999999999999999999999999999999998766543 4677899999997 3554
Q ss_pred -ccHHHhcCCCC-----C----CC----HHHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1144 -GTVRNNLDPLE-----E----YK----DEEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1144 -gTvr~Nl~~~~-----~----~~----d~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
.|+++|+.... . .. ++++.++++.+++. +. .......||||||||++|||||+.
T Consensus 344 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LSgGekqrv~lA~al~~ 412 (501)
T PRK10762 344 GMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPS-----------MEQAIGLLSGGNQQKVAIARGLMT 412 (501)
T ss_pred CCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCC-----------ccCchhhCCHHHHHHHHHHHHHhh
Confidence 59999986411 0 11 23456677777663 21 223446799999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 413 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 413 RPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred CCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 999999999999999999999999999865 47899999999999987 9999999999999999887764
No 35
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-66 Score=650.98 Aligned_cols=543 Identities=22% Similarity=0.289 Sum_probs=428.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 295 FFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGERE--FKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKM 372 (1300)
Q Consensus 295 ~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~--~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~i 372 (1300)
.+..|+.++++.+.+++..+..-+..+++..++..+...+. .......+++.+++..++..+......|....+|.++
T Consensus 659 ~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~L 738 (1228)
T KOG0055|consen 659 NKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKL 738 (1228)
T ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778888888888877777777778888776653321 1222223555555555556665555556667889999
Q ss_pred HHHHHHHHHHHHhcCCchhhc--CCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000755 373 RSVLVSMVYNKGLTLSCQAKQ--SYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLI-LYKNLGLASIAALF 448 (1300)
Q Consensus 373 r~~L~~~Iy~K~L~ls~~~~~--~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~l-L~~~lg~~~l~~l~ 448 (1300)
-..++.+.|+|.++.....++ +++ |.+.+++.+|+..+...... +-.+......+++++.+ +++.|.++ +++++
T Consensus 739 t~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~la-lv~la 816 (1228)
T KOG0055|consen 739 TKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLA-LVVLA 816 (1228)
T ss_pred HHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 999999999999999887664 456 99999999999998876432 22222222222333322 33444444 45566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000755 449 ATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIEL-RKIEAGWLKKFLYTGAMTS 527 (1300)
Q Consensus 449 ~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~-R~~E~~~l~~~~~~~~~~~ 527 (1300)
..+++....+...+....+..+.++..++-.+...|++.|||+||.++.|++|.+...+. ++-.....++.... .+..
T Consensus 817 ~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~-gl~f 895 (1228)
T KOG0055|consen 817 TFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLIS-GLGF 895 (1228)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 666667777778888899999999999999999999999999999999999988877553 22222223332222 2222
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCccc
Q 000755 528 FVFWGAPTF--VSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDD-LQSDV 604 (1300)
Q Consensus 528 ~~~~~~p~~--v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e-~~~~~ 604 (1300)
.+..+...+ .....||.+++..+..++..+|..+..+.+-...+.+.....+.+..|+.|..+|.++++.+. .+.+.
T Consensus 896 ~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~ 975 (1228)
T KOG0055|consen 896 GFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDS 975 (1228)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 222222222 234567778888889999999888877776666667777777788899999999999998765 22222
Q ss_pred ccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe---
Q 000755 605 VEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 681 (1300)
Q Consensus 605 ~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--- 681 (1300)
......+...+.|+++|++|+||..++.++|+|+||+|++|+.+|+||||||||||.+.+|-++|+|++|.|.++|.
T Consensus 976 ~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik 1055 (1228)
T KOG0055|consen 976 TSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIK 1055 (1228)
T ss_pred CCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccc
Confidence 11111223457899999999999888899999999999999999999999999999999999999999999999984
Q ss_pred ----------EEEEecCCcCCCCCHHHHHhcCC-CCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 ----------KAYVAQSPWIQSGNIEDNILFGK-PMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 ----------~ayv~Q~~~l~~~Ti~eNI~fg~-~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
+|.|+|+|.||++||||||++|. ..+++++.++++.+..++++..||+|++|.+||+|.+|||||||||
T Consensus 1056 ~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRI 1135 (1228)
T KOG0055|consen 1056 DLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRI 1135 (1228)
T ss_pred cCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHH
Confidence 59999999999999999999993 4699999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
|||||+.+||+||||||+|||||.++++ +.++.+.....|+|+|+|+||++.+.+||.|.|++||+|+|+|+|++|++.
T Consensus 1136 AIARAilRnPkILLLDEATSALDseSEr-vVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~ 1214 (1228)
T KOG0055|consen 1136 AIARAILRNPKILLLDEATSALDSESER-VVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAK 1214 (1228)
T ss_pred HHHHHHHcCCCeeeeeccchhhhhhhHH-HHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEecccHHHHHhC
Confidence 9999999999999999999999999966 458899999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHH
Q 000755 831 GTDFMVLVGAH 841 (1300)
Q Consensus 831 ~~~~~~l~~~~ 841 (1300)
++.|.+++..+
T Consensus 1215 ~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1215 RGIYFRLVQLQ 1225 (1228)
T ss_pred CCchHHHhhhc
Confidence 99999987543
No 36
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.4e-66 Score=643.65 Aligned_cols=529 Identities=21% Similarity=0.284 Sum_probs=415.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000755 309 ALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSMVYNKGLTLS 388 (1300)
Q Consensus 309 ~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls 388 (1300)
.++..++..+.|++++.++|.+..........+.+++++++..++..++.....+...+.+.++...++..+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556667788999999999775332111122333444444445556666665666777889999999999999999999
Q ss_pred chhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 389 CQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGL-ASIAALFATVLIMLTNFPLGRLQEN 466 (1300)
Q Consensus 389 ~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~-~~l~~l~~~~l~~~~~~~~~k~~~~ 466 (1300)
...+.++++|++++++++|++.+..... .+..++..++..++++++++..+++ .+++.++++++.+.+...+.++.++
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986543 3444444444444443333212222 2333344444445555667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 000755 467 FQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWG--APTFVSVATFGA 544 (1300)
Q Consensus 467 ~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~--~p~~v~~~~f~~ 544 (1300)
..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+..+...+...+.............. ....+.++.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888888888999999999999999999999988887664332222222211111111111111 112233455677
Q ss_pred HHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcceEEEEeEEE
Q 000755 545 CMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSETAIEIVDGNF 624 (1300)
Q Consensus 545 ~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~i~~~~f 624 (1300)
+.+.++.+|.|.+++++.++..+..|+..+++.+..+.+++++.+||.++++.++..+..... .......|+++|++|
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~--~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEP--VPEGRGELDVNIRQF 321 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCC--CCCCCCcEEEEEEEE
Confidence 888899999999999999999999999999999999999999999999999765432211111 111234699999999
Q ss_pred EecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EEEEecCCcC
Q 000755 625 AWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWI 691 (1300)
Q Consensus 625 s~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ayv~Q~~~l 691 (1300)
+|+. .++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++||+|+|++
T Consensus 322 ~y~~-~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 322 TYPQ-TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred ECCC-CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 9974 3467999999999999999999999999999999999999999999999873 6999999999
Q ss_pred CCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCC
Q 000755 692 QSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFS 770 (1300)
Q Consensus 692 ~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~s 770 (1300)
|++|++|||.+|.+ .++++++++++.+++++++..+|+|++|.+|++|.+|||||||||+||||++++|+|+|||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 99999999999965 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHHHHHH
Q 000755 771 AVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVLVGAH 841 (1300)
Q Consensus 771 aLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 841 (1300)
+||+++++.+.+. +....+++|+|+||||++.++.||+|++|++|++++.|+++++++..+.|.++...+
T Consensus 481 ~LD~~~~~~i~~~-l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 481 AVDGRTEHQILHN-LRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred cCCHHHHHHHHHH-HHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 9999999999764 555667899999999999999999999999999999999999999888888877654
No 37
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-68 Score=656.95 Aligned_cols=480 Identities=18% Similarity=0.282 Sum_probs=340.2
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCC-
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS- 693 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~- 693 (1300)
|+++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++| .++|++|++.++.
T Consensus 2 l~i~~ls~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (530)
T PRK15064 2 LSTANITMQFG---AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEE 78 (530)
T ss_pred EEEEEEEEEeC---CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCC
Confidence 68999999995 35799999999999999999999999999999999999999999999986 6899999987764
Q ss_pred CCHHHHHhcCCC-C------------------C-HHHHHHHHH----------HhcchHHHhhccCCCcccc-cCCCCCC
Q 000755 694 GNIEDNILFGKP-M------------------D-REKYDRVLE----------ACSLKKDLEILSFGDQTVI-GERGINL 742 (1300)
Q Consensus 694 ~Ti~eNI~fg~~-~------------------~-~~~~~~vl~----------~~~l~~dl~~l~~Gd~t~i-ge~g~~L 742 (1300)
.|++||+.++.. . + ...+.+..+ .....+-++.+ |..... .....+|
T Consensus 79 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~L 156 (530)
T PRK15064 79 FTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIPEEQHYGLMSEV 156 (530)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCChhHhcCchhhc
Confidence 599999987631 0 0 000000000 00011112222 222111 2356789
Q ss_pred CHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEE-E
Q 000755 743 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKIT-Q 820 (1300)
Q Consensus 743 SGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~-~ 820 (1300)
|||||||++|||||+.+|+++||||||++||+++...+.+ .+.. .++|+|+|||+++++.. ||+|++|++|+++ +
T Consensus 157 SgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~--~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~ 233 (530)
T PRK15064 157 APGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLED-VLNE--RNSTMIIISHDRHFLNSVCTHMADLDYGELRVY 233 (530)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHH-HHHh--CCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999888865 4442 47899999999999875 9999999999994 8
Q ss_pred ecChHHHHhcCchH-HHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHH
Q 000755 821 AGKYNDILNSGTDF-MVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSAR 899 (1300)
Q Consensus 821 ~g~~~~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r 899 (1300)
.|++++++...... .....+ |-+...
T Consensus 234 ~g~~~~~~~~~~~~~~~~~~~-----------------------------------------------------~~~~~~ 260 (530)
T PRK15064 234 PGNYDEYMTAATQARERLLAD-----------------------------------------------------NAKKKA 260 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHH-----------------------------------------------------HHHHHH
Confidence 89998876421100 000000 000000
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 900 ELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLL 979 (1300)
Q Consensus 900 ~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 979 (1300)
+.+++.. +..+.. .+..
T Consensus 261 ~~~~~~~----------------------------~~~~~~------~~~~----------------------------- 277 (530)
T PRK15064 261 QIAELQS----------------------------FVSRFS------ANAS----------------------------- 277 (530)
T ss_pred HHHHHHH----------------------------HHHHhh------ccch-----------------------------
Confidence 0000000 000000 0000
Q ss_pred HHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEe
Q 000755 980 ISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILN 1059 (1300)
Q Consensus 980 ~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~ 1059 (1300)
. . ...+......++... ...+...........+...-+....++++|
T Consensus 278 --------~---~---------------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 324 (530)
T PRK15064 278 --------K---A---------------------KQATSRAKQIDKIKL-EEVKPSSRQNPFIRFEQDKKLHRNALEVEN 324 (530)
T ss_pred --------h---h---------------------HHHHHHHHHHhhccc-cccCCccccCceeeCCCCCCCCCceEEEEe
Confidence 0 0 000000000111000 000000000000000000001234699999
Q ss_pred eeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCC
Q 000755 1060 LQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDP 1139 (1300)
Q Consensus 1060 v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~ 1139 (1300)
++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++| +.+++|+||++
T Consensus 325 l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~~~~q~~ 391 (530)
T PRK15064 325 LTKGFDNG--PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANIGYYAQDH 391 (530)
T ss_pred eEEeeCCc--eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEEEEEcccc
Confidence 99999753 599999999999999999999999999999999999999999999987 25799999997
Q ss_pred C--CCc-ccHHHhcCCCC--CCCHHHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000755 1140 T--MFE-GTVRNNLDPLE--EYKDEEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVL 1213 (1300)
Q Consensus 1140 ~--lf~-gTvr~Nl~~~~--~~~d~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iL 1213 (1300)
. ++. .|+++|+.... ...++++.++|+.+++. +... ....+||||||||++||||++.+|+||
T Consensus 392 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LSgGq~qrv~la~al~~~p~ll 460 (530)
T PRK15064 392 AYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIK-----------KSVKVLSGGEKGRMLFGKLMMQKPNVL 460 (530)
T ss_pred cccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhc-----------CcccccCHHHHHHHHHHHHHhcCCCEE
Confidence 4 443 49999985421 22355678889998874 3322 234678999999999999999999999
Q ss_pred EEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEE-EecChhhHHhc
Q 000755 1214 VLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIE-EYDSPTKLLEN 1279 (1300)
Q Consensus 1214 lLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~-e~g~~~~l~~~ 1279 (1300)
||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ ..|++.++++.
T Consensus 461 lLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 461 VMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred EEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 999999999999999999999886 4699999999999987 9999999999998 77999888754
No 38
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-68 Score=659.70 Aligned_cols=438 Identities=22% Similarity=0.342 Sum_probs=335.4
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC--CccEEEEcC--------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK--ISGTLKLCG-------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~i~~~g-------------- 680 (1300)
++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 68999999995 35799999999999999999999999999999999999987 799999977
Q ss_pred eEEEEecCCcCCC-CCHHHHHhcCCCC-------CHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 681 TKAYVAQSPWIQS-GNIEDNILFGKPM-------DRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~-~Ti~eNI~fg~~~-------~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
.++||+|++.++. .|++||+.++... +.+ +.+++++.+++.... ......+|||||||
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~q 148 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN----------VTRPVGDYGGGQQQ 148 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc----------ccCchhhCCHHHHH
Confidence 2799999998765 5999999986431 111 222333333322100 12335689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
|++||||++.+|+++||||||++||+.+...+.+ .+..+ .+++|+|+|||+++++.. ||+|++|++|+++..|+.++
T Consensus 149 rv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (500)
T TIGR02633 149 LVEIAKALNKQARLLILDEPSSSLTEKETEILLD-IIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMST 227 (500)
T ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCccc
Confidence 9999999999999999999999999999998876 44433 357899999999999875 99999999999987665322
Q ss_pred HHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHh
Q 000755 827 ILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVG 906 (1300)
Q Consensus 827 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~ 906 (1300)
+... .
T Consensus 228 ~~~~-----~---------------------------------------------------------------------- 232 (500)
T TIGR02633 228 MSED-----D---------------------------------------------------------------------- 232 (500)
T ss_pred CCHH-----H----------------------------------------------------------------------
Confidence 1000 0
Q ss_pred hhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000755 907 VCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGV 986 (1300)
Q Consensus 907 ~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~ 986 (1300)
+. +.+ .+.
T Consensus 233 -----~~----~~~---------------------------------------------------------------~~~ 240 (500)
T TIGR02633 233 -----II----TMM---------------------------------------------------------------VGR 240 (500)
T ss_pred -----HH----HHH---------------------------------------------------------------hCc
Confidence 00 000 000
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCC
Q 000755 987 IEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAP 1066 (1300)
Q Consensus 987 ~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~ 1066 (1300)
+ .+. ..+.++ .+ +....++++|++++|+.
T Consensus 241 --~---------------------------------~~~-----~~~~~~-------~~----~~~~~l~~~~l~~~~~~ 269 (500)
T TIGR02633 241 --E---------------------------------ITS-----LYPHEP-------HE----IGDVILEARNLTCWDVI 269 (500)
T ss_pred --c---------------------------------ccc-----cccccc-------cC----CCCceEEEeCCcccccc
Confidence 0 000 000000 00 11225999999999942
Q ss_pred C-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-CcceEEECCeecCCCCH-HHHhcccEEEcCCC---C
Q 000755 1067 H-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-TAGEIVIDGINISSIGL-HDLRSRLSIIPQDP---T 1140 (1300)
Q Consensus 1067 ~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-~~G~I~idg~di~~i~~-~~lr~~i~~vpQ~~---~ 1140 (1300)
+ ...+|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+. ..+|++++|+||++ .
T Consensus 270 ~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 349 (500)
T TIGR02633 270 NPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHG 349 (500)
T ss_pred cccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCC
Confidence 1 23589999999999999999999999999999999999995 89999999999865433 45678899999996 3
Q ss_pred CCc-ccHHHhcCCCC-----C---CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHc
Q 000755 1141 MFE-GTVRNNLDPLE-----E---YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLL 1207 (1300)
Q Consensus 1141 lf~-gTvr~Nl~~~~-----~---~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall 1207 (1300)
+|+ .|+++|+.... . .. .+++.++++++++.+. ..+. ....||||||||++|||||+
T Consensus 350 l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~----~~~~LSgGqkqrv~la~al~ 419 (500)
T TIGR02633 350 IVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTA------SPFL----PIGRLSGGNQQKAVLAKMLL 419 (500)
T ss_pred cCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCC------CccC----ccccCCHHHHHHHHHHHHHh
Confidence 665 49999986421 1 11 1245667777766311 1222 33579999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1208 KKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1208 ~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
.+|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|+++...+..++
T Consensus 420 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 420 TNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred hCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 9999999999999999999999999998864 47899999999999987 999999999999987765443
No 39
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-65 Score=603.72 Aligned_cols=529 Identities=23% Similarity=0.307 Sum_probs=427.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 304 FTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSMVYNK 383 (1300)
Q Consensus 304 ~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~Iy~K 383 (1300)
..+++.++..++...+.+++-.+++.+-..+. ....+.++++++++.++.+++.........+.+.++|..|+..+++|
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL-FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666667777666665543322 22334455566666677777777777778899999999999999999
Q ss_pred HhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 384 GLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHD---PWLVILQVSLALLILYKNLGLASIAALFATVLIMLTNFP 459 (1300)
Q Consensus 384 ~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~---~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~l~~~~~~~ 459 (1300)
..++++..-++.++|+++++++.-++.++.++.. +.. ....|+.+.++++.+. |. ++++.++.++++.++.+.
T Consensus 83 l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~--w~-aalIllit~PlIPlfMil 159 (559)
T COG4988 83 LAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFN--WA-AALILLITAPLIPLFMIL 159 (559)
T ss_pred HHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HH-HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999887543 332 2334444444444443 32 334445555555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 460 LGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKI----IELRKIEAGWLKKFLYTGAMTSFVFWGAPT 535 (1300)
Q Consensus 460 ~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i----~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~ 535 (1300)
+++..++..++.++....-....-+.|+|+.++|.|+..+...++| ++.|+..++.++-.....++.-++...+.
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi- 238 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI- 238 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 7777788888888888888889999999999999999988777777 44688888888877666665555433322
Q ss_pred HHHHHHHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC-CCCCCC
Q 000755 536 FVSVATFGACMLLG-IPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEK-HPRGSS 613 (1300)
Q Consensus 536 ~v~~~~f~~~~~~~-~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~-~~~~~~ 613 (1300)
..++.+.+..+.+ ++++....+.++.+.--+..|++.+...++.-.++..+.+++..|++.|....+..++ ......
T Consensus 239 -AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~ 317 (559)
T COG4988 239 -ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEP 317 (559)
T ss_pred -HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCC
Confidence 2233344445556 6999999999998888889999999999999999999999999999887654433221 111112
Q ss_pred cceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------
Q 000755 614 ETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 680 (1300)
Q Consensus 614 ~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 680 (1300)
...++.+|++|.|+.+ +++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||
T Consensus 318 ~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k 395 (559)
T COG4988 318 PIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRK 395 (559)
T ss_pred CceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHh
Confidence 2345556999999743 3899999999999999999999999999999999999999999999998
Q ss_pred eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 000755 681 TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 759 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~ 759 (1300)
+++||+|+|++|.+||||||+|+++ .++++..++++..++.+.++. |+|.+|.|||+|.+|||||+||++||||++++
T Consensus 396 ~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~ 474 (559)
T COG4988 396 QISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSP 474 (559)
T ss_pred HeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCC
Confidence 3699999999999999999999999 678999999999999999999 99999999999999999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHHHH
Q 000755 760 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVLVG 839 (1300)
Q Consensus 760 ~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 839 (1300)
+++||||||||+||++|++.|. +.+..+.++||+|+||||++.+..+|+|++|++|+++++|+|+++.++++.|..++.
T Consensus 475 ~~l~llDEpTA~LD~etE~~i~-~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~ 553 (559)
T COG4988 475 ASLLLLDEPTAHLDAETEQIIL-QALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLK 553 (559)
T ss_pred CCEEEecCCccCCCHhHHHHHH-HHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHH
Confidence 9999999999999999988775 567778889999999999999999999999999999999999999999999998886
Q ss_pred HHH
Q 000755 840 AHQ 842 (1300)
Q Consensus 840 ~~~ 842 (1300)
+++
T Consensus 554 ~q~ 556 (559)
T COG4988 554 QQE 556 (559)
T ss_pred HHh
Confidence 543
No 40
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=8.2e-65 Score=634.83 Aligned_cols=540 Identities=16% Similarity=0.223 Sum_probs=425.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 293 ALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKM 372 (1300)
Q Consensus 293 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~i 372 (1300)
.+++.+++.++...++.++..++..+.|++++.++|.+...+.. ..+++.+++..++..+......+...++..++
T Consensus 12 ~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (585)
T TIGR01192 12 SYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV----LPTLALWAGFGVFNTIAYVLVAREADRLAHGR 87 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888999999999999999999999999977543211 11111222233344455555566677888899
Q ss_pred HHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000755 373 RSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALL-ILYKNLGLASIAALFAT 450 (1300)
Q Consensus 373 r~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~-lL~~~lg~~~l~~l~~~ 450 (1300)
+..++..+|+|.++++...++++++|++++++++|++.+.+++.. +......++.++++++ +++..+.++.+ .++++
T Consensus 88 ~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li-~l~~~ 166 (585)
T TIGR01192 88 RATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIV-LMVLG 166 (585)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 999999999999999999999999999999999999999876542 3333344444433333 33444444333 33344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000755 451 VLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFV- 529 (1300)
Q Consensus 451 ~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~- 529 (1300)
++...+...+.++.++..++..+..++..+.+.|.++|+++||.++.|+.+.+++.+..+.-.+...+..........+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555667777777788888888899999999999999999999999888887664332222111111111111111
Q ss_pred H-HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCC
Q 000755 530 F-WGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKH 608 (1300)
Q Consensus 530 ~-~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~ 608 (1300)
. ...-..+.++.++++.+.++.++.|.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..++.....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 326 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAP 326 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCC
Confidence 1 111123345567788888999999999999999999999999999999999999999999999987654322111111
Q ss_pred CCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------
Q 000755 609 PRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------- 681 (1300)
Q Consensus 609 ~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------- 681 (1300)
+.......++++|++|+|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 327 ~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~ 404 (585)
T TIGR01192 327 ELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTR 404 (585)
T ss_pred CCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCH
Confidence 11112346999999999973 246899999999999999999999999999999999999999999999873
Q ss_pred ------EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 682 ------KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 682 ------~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
++||+|+|++|++|++|||.++.+ .++++.+++++.+++++++..+|+|++|.+|++|.+|||||||||+|||
T Consensus 405 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lAR 484 (585)
T TIGR01192 405 ESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIAR 484 (585)
T ss_pred HHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHH
Confidence 699999999999999999999975 5788899999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchH
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDF 834 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 834 (1300)
|++++|+++|||||||+||+++++.+.+ .+....+++|+|+||||++.++.||+|++|++|++++.|+++++++.++.|
T Consensus 485 all~~p~ililDEpts~LD~~~~~~i~~-~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y 563 (585)
T TIGR01192 485 AILKNAPILVLDEATSALDVETEARVKN-AIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRF 563 (585)
T ss_pred HHhcCCCEEEEECCccCCCHHHHHHHHH-HHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChH
Confidence 9999999999999999999999998865 556666789999999999999999999999999999999999999998888
Q ss_pred HHHHHH
Q 000755 835 MVLVGA 840 (1300)
Q Consensus 835 ~~l~~~ 840 (1300)
.++...
T Consensus 564 ~~l~~~ 569 (585)
T TIGR01192 564 YKLLRR 569 (585)
T ss_pred HHHHHh
Confidence 887654
No 41
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-68 Score=653.88 Aligned_cols=433 Identities=23% Similarity=0.326 Sum_probs=335.2
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------e
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 681 (1300)
.++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFP---GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEEC---CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 589999999996 24699999999999999999999999999999999999999999999876 2
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC------CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP------MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~------~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
++|++|++.++. .|++||+.++.. .+. ++..++++.+++. ........+||||||||+
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv 149 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVD-----------IDPDTPLKYLSIGQRQMV 149 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCC-----------CCcCCchhhCCHHHHHHH
Confidence 799999998776 599999998642 122 2333344444332 123455678999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
+||||++.+|+++||||||++||+.+.+.+++. +..+ .+++|+|+|||+++++.. ||+|++|++|+++..++..+..
T Consensus 150 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 228 (501)
T PRK11288 150 EIAKALARNARVIAFDEPTSSLSAREIEQLFRV-IRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQV 228 (501)
T ss_pred HHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccC
Confidence 999999999999999999999999999988754 4433 347899999999998865 9999999999998644211000
Q ss_pred hcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhh
Q 000755 829 NSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVC 908 (1300)
Q Consensus 829 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~ 908 (1300)
. .. ++
T Consensus 229 ~----~~----------------------------------------------------------------~~------- 233 (501)
T PRK11288 229 D----RD----------------------------------------------------------------QL------- 233 (501)
T ss_pred C----HH----------------------------------------------------------------HH-------
Confidence 0 00 00
Q ss_pred hhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 000755 909 KAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIE 988 (1300)
Q Consensus 909 ~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~ 988 (1300)
++.+ .....
T Consensus 234 -----------------~~~~-----------------------------------------------------~~~~~- 242 (501)
T PRK11288 234 -----------------VQAM-----------------------------------------------------VGREI- 242 (501)
T ss_pred -----------------HHHh-----------------------------------------------------cCCCc-
Confidence 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCC
Q 000755 989 PAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHL 1068 (1300)
Q Consensus 989 ~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~ 1068 (1300)
++. .+.++ .+ +....++++|++++
T Consensus 243 -----------------------------------~~~-----~~~~~-------~~----~~~~~l~~~~~~~~----- 266 (501)
T PRK11288 243 -----------------------------------GDI-----YGYRP-------RP----LGEVRLRLDGLKGP----- 266 (501)
T ss_pred -----------------------------------ccc-----ccccc-------cC----CCCcEEEEeccccC-----
Confidence 000 00000 00 11235899999842
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH-HHHhcccEEEcCCCC---CCc-
Q 000755 1069 PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL-HDLRSRLSIIPQDPT---MFE- 1143 (1300)
Q Consensus 1069 ~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~-~~lr~~i~~vpQ~~~---lf~- 1143 (1300)
.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ...|++++|+||++. +|.
T Consensus 267 -~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 345 (501)
T PRK11288 267 -GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPV 345 (501)
T ss_pred -CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCC
Confidence 38999999999999999999999999999999999999999999999999865433 345778999999973 555
Q ss_pred ccHHHhcCCCCC---------CC----HHHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1144 GTVRNNLDPLEE---------YK----DEEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1144 gTvr~Nl~~~~~---------~~----d~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
.|+.+|+..... .. ++++.++++.+++. +. . .....+||||||||++|||||+.+
T Consensus 346 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~~LSgGq~qrl~la~al~~~ 414 (501)
T PRK11288 346 HSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPS-------R----EQLIMNLSGGNQQKAILGRWLSED 414 (501)
T ss_pred CCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCC-------c----cCccccCCHHHHHHHHHHHHHccC
Confidence 699999864210 01 12456677777662 21 2 223457999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|++++..
T Consensus 415 p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 415 MKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred CCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 99999999999999999999999998864 37899999999999987 9999999999999999887765
No 42
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3e-65 Score=635.05 Aligned_cols=522 Identities=19% Similarity=0.211 Sum_probs=414.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 296 FSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSV 375 (1300)
Q Consensus 296 ~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~ 375 (1300)
+.+++.++..+++.++..++..+.|++++.++|.+..... ....+.+++++++..++..++.....+...+++.++...
T Consensus 2 ~~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (544)
T TIGR01842 2 SKNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGA 80 (544)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466677888888899999999999999999997643221 112233444455555666777777778888999999999
Q ss_pred HHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 376 LVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY--MHDPWLVILQVSLALLILYKNLGLASIAALFATVLI 453 (1300)
Q Consensus 376 L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~--~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~~~l~ 453 (1300)
++..+|+|.++++.. ..+...+.+++|++++.+++.. +..+...++.++.++++++..+.++.++ ++.++++
T Consensus 81 lr~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~-l~~~~l~ 154 (544)
T TIGR01842 81 LNQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILA-LGGAVVL 154 (544)
T ss_pred HHHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHH
Confidence 999999999999873 2356788899999999987543 2333344444333334444444433332 3333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000755 454 MLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWG- 532 (1300)
Q Consensus 454 ~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~- 532 (1300)
+++.....+..++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+..++..+...+..............
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677777788889999999999999999999999999999999998776554444333322222222221111
Q ss_pred -HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCC
Q 000755 533 -APTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRG 611 (1300)
Q Consensus 533 -~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~ 611 (1300)
....+.+++++++.+.++.+|+|.+++++.++..+..|+..++..+..+.+++.+.+|+.++++.++..+... . ..
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~--~~ 311 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-P--LP 311 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-C--CC
Confidence 1123345567888888999999999999999999999999999999999999999999999997654332111 1 11
Q ss_pred CCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-----------
Q 000755 612 SSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------- 680 (1300)
Q Consensus 612 ~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------- 680 (1300)
..+..++++|++|+|+. .++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 312 ~~~~~i~~~~v~~~y~~-~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 312 EPEGHLSVENVTIVPPG-GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCeEEEEEEEEEcCC-CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 22346999999999973 346899999999999999999999999999999999999999999999987
Q ss_pred --eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 681 --TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 681 --~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
.++||||+|++|++|++|||.++.+ .+++++.++++.++++++++.+|+|++|.+||+|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 3699999999999999999997665 7889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
++|+++|||||||+||+++++.+.+ .+.... +++|+|+|||+++.+..||+|++|++|++++.|+++++++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~-~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALAN-AIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHH-HHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999998875 455543 6899999999999988899999999999999999999864
No 43
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-67 Score=649.02 Aligned_cols=434 Identities=23% Similarity=0.354 Sum_probs=331.2
Q ss_pred EeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------EEEE
Q 000755 620 VDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------KAYV 685 (1300)
Q Consensus 620 ~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------~ayv 685 (1300)
+|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 2 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 2 SNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 67889985 357999999999999999999999999999999999999999999999872 6999
Q ss_pred ecCCcCC-CCCHHHHHhcCCC------CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHcc
Q 000755 686 AQSPWIQ-SGNIEDNILFGKP------MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQ 758 (1300)
Q Consensus 686 ~Q~~~l~-~~Ti~eNI~fg~~------~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~ 758 (1300)
+|++.++ +.|++||+.++.. .+.++..+.+ .+-++.+ |..........+||||||||++||||++.
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDT-----KAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHH-----HHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 9999765 4699999998642 1222111111 1112222 22233455678899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCchHHH
Q 000755 759 DADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNSGTDFMV 836 (1300)
Q Consensus 759 ~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 836 (1300)
+|+++||||||++||+.+.+.+++. +..+ ..++|+|++||+++.+.. ||+|++|++|++++.|+.+++... .
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-----~ 225 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD-----K 225 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-----H
Confidence 9999999999999999999988764 4443 357899999999998865 999999999999988876443100 0
Q ss_pred HHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhhhhhHHHHH
Q 000755 837 LVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVCKAPVIQHF 916 (1300)
Q Consensus 837 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~ 916 (1300)
..
T Consensus 226 ~~------------------------------------------------------------------------------ 227 (491)
T PRK10982 226 II------------------------------------------------------------------------------ 227 (491)
T ss_pred HH------------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHH
Q 000755 917 SETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAV 996 (1300)
Q Consensus 917 ~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l 996 (1300)
+.+ + +.
T Consensus 228 -~~~--------~-------------------------------------------------------~~---------- 233 (491)
T PRK10982 228 -AMM--------V-------------------------------------------------------GR---------- 233 (491)
T ss_pred -HHH--------h-------------------------------------------------------CC----------
Confidence 000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCcceeeee
Q 000755 997 TYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGLT 1076 (1300)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~is 1076 (1300)
.+ .+ ..+.++ . + +....|+++|++++| +.+|+|+|
T Consensus 234 ----------------------~~---~~-----~~~~~~------~-~----~~~~~i~~~~l~~~~----~~~l~~vs 268 (491)
T PRK10982 234 ----------------------SL---TQ-----RFPDKE------N-K----PGEVILEVRNLTSLR----QPSIRDVS 268 (491)
T ss_pred ----------------------Cc---cc-----cccccc------C-C----CCCcEEEEeCccccc----Ccccceee
Confidence 00 00 000000 0 0 122369999999974 24899999
Q ss_pred EEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH-HhcccEEEcCCCC---CCcc-cHHHh--
Q 000755 1077 CTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD-LRSRLSIIPQDPT---MFEG-TVRNN-- 1149 (1300)
Q Consensus 1077 l~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~-lr~~i~~vpQ~~~---lf~g-Tvr~N-- 1149 (1300)
|+|++||++||+|+||||||||+++|+|+.+|++|+|.++|.++...+... +|+.++|+||++. +|.. |+.+|
T Consensus 269 l~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~ 348 (491)
T PRK10982 269 FDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSL 348 (491)
T ss_pred EEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHhee
Confidence 999999999999999999999999999999999999999999998766543 4677999999963 5653 76666
Q ss_pred ---cCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 000755 1150 ---LDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEA 1218 (1300)
Q Consensus 1150 ---l~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEp 1218 (1300)
+... .... ++.+.++++.+++.+ .. ......+||||||||++||||++++|+|||||||
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~----~~~~~~~LSgGq~qrv~la~al~~~p~illLDEP 418 (491)
T PRK10982 349 ISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT------PG----HRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEP 418 (491)
T ss_pred hhhhhhhcccccccCcHHHHHHHHHHHHhcCccC------CC----cccccccCCcHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3211 1011 123455666665531 01 2334467999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1219 TASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1219 Ts~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
|+|||+.+.+.+.+.|++.. .+.|||++||+++.+.. ||||++|++|+++..++++++
T Consensus 419 t~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 419 TRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred CcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccC
Confidence 99999999999999998754 47899999999999987 999999999999988876543
No 44
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.1e-64 Score=628.70 Aligned_cols=510 Identities=23% Similarity=0.262 Sum_probs=398.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 298 AWKEIVFTAILALLYTLANYVGPYLIDTFVQYLN-GEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVL 376 (1300)
Q Consensus 298 ~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~-~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L 376 (1300)
+|+.++..+++.++..++..+.|++++.++|.+. .... ....+.+++.+++..++..++.....+...+++.++...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 1 ARRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778888899999999999999999999873 3221 1222333444445555566667777778888999999999
Q ss_pred HHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000755 377 VSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLIL-YKNLGLASIAALFATVLIM 454 (1300)
Q Consensus 377 ~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL-~~~lg~~~l~~l~~~~l~~ 454 (1300)
+..+|+|.++++...+.++++|+++|++++|++.+++++. .+..++...+.++++++++ +..+.++ ++.++.+++..
T Consensus 80 r~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~~l~~~~l~~ 158 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISG-LILLLTAPLIP 158 (529)
T ss_pred HHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHH
Confidence 9999999999999999999999999999999999998754 3444444444444443333 3333222 22233333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 455 LTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWGAP 534 (1300)
Q Consensus 455 ~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p 534 (1300)
.+...+.++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+..++..+...+................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445677777778888889999999999999999999999999999888866433222221111111111111111111
Q ss_pred --HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCC
Q 000755 535 --TFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGS 612 (1300)
Q Consensus 535 --~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~ 612 (1300)
..+.+..++++.+..+.+|.|.+++++.+...+..|+..+...+..+.+++++++|+.++++.++.+.+.. ..+ ..
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~-~~~-~~ 316 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA-PVT-AA 316 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc-CCC-CC
Confidence 11222234455556788999999999999999999999999999999999999999999997543221111 111 11
Q ss_pred CcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------
Q 000755 613 SETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----------- 681 (1300)
Q Consensus 613 ~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~----------- 681 (1300)
....|+++|++|+|+. .++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 317 ~~~~i~~~~v~f~y~~-~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPG-RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCC-CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 2247999999999974 3358999999999999999999999999999999999999999999999984
Q ss_pred --EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHcc
Q 000755 682 --KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQ 758 (1300)
Q Consensus 682 --~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~ 758 (1300)
++||+|+|++|++||+|||.+|.+ .++++.+++++.++++++++.+|+|++|.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 799999999999999999999876 68899999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEE
Q 000755 759 DADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVM 813 (1300)
Q Consensus 759 ~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l 813 (1300)
+|+|++||||||+||+++++.+++ .+....+++|+|+||||++.+..||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTE-ALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999975 455666789999999999999999999985
No 45
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.9e-66 Score=643.06 Aligned_cols=480 Identities=22% Similarity=0.313 Sum_probs=339.0
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCC
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 693 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~ 693 (1300)
.|+++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|+++.
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 83 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDP 83 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCC
Confidence 5899999999952 36799999999999999999999999999999999999999999999864 6899999999875
Q ss_pred -CCHHHHHhcCCC-C----------------CHH-------HHHHH---HHHhc-------chHHHhhccCCCcccccCC
Q 000755 694 -GNIEDNILFGKP-M----------------DRE-------KYDRV---LEACS-------LKKDLEILSFGDQTVIGER 738 (1300)
Q Consensus 694 -~Ti~eNI~fg~~-~----------------~~~-------~~~~v---l~~~~-------l~~dl~~l~~Gd~t~ige~ 738 (1300)
.|+.||+.++.. + ..+ ++.++ ++.++ +..-++.+ |.. ....+
T Consensus 84 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~-~~~~~ 160 (556)
T PRK11819 84 EKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL--RCP-PWDAK 160 (556)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC--CCC-cccCc
Confidence 499999987631 0 000 01111 11100 11112222 221 23556
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCe
Q 000755 739 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGK 817 (1300)
Q Consensus 739 g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~ 817 (1300)
..+||||||||++||||++.+|+++||||||++||+.+...+.+ ++..+ +.|+|+|||+++++.. ||+|++|++|+
T Consensus 161 ~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~-~L~~~--~~tviiisHd~~~~~~~~d~i~~l~~g~ 237 (556)
T PRK11819 161 VTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQ-FLHDY--PGTVVAVTHDRYFLDNVAGWILELDRGR 237 (556)
T ss_pred hhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEeCCE
Confidence 77899999999999999999999999999999999999988864 55544 3599999999999876 99999999999
Q ss_pred EE-EecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhH
Q 000755 818 IT-QAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIP 896 (1300)
Q Consensus 818 i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~ 896 (1300)
++ +.|+|+++.+....- . ...... +-.
T Consensus 238 i~~~~g~~~~~~~~~~~~--~-~~~~~~-------------------------------------------------~~~ 265 (556)
T PRK11819 238 GIPWEGNYSSWLEQKAKR--L-AQEEKQ-------------------------------------------------EAA 265 (556)
T ss_pred EEEecCCHHHHHHHHHHH--H-HHHHHH-------------------------------------------------HHH
Confidence 86 889998876421100 0 000000 000
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 897 SARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSL 976 (1300)
Q Consensus 897 ~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 976 (1300)
..++++++ ..|.....
T Consensus 266 ~~~~~~~~----------------------------------------------------~~~~~~~~------------ 281 (556)
T PRK11819 266 RQKALKRE----------------------------------------------------LEWVRQSP------------ 281 (556)
T ss_pred HHHHHHHH----------------------------------------------------HHHHHHhh------------
Confidence 00000000 00000000
Q ss_pred HHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEE
Q 000755 977 VLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVD 1056 (1300)
Q Consensus 977 ~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~ 1056 (1300)
.+ . ....+......+|..+. .+.+.+.......++...+....++
T Consensus 282 -------~~-----~---------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (556)
T PRK11819 282 -------KA-----R---------------------QAKSKARLARYEELLSE--EYQKRNETNEIFIPPGPRLGDKVIE 326 (556)
T ss_pred -------hh-----h---------------------HHHHHHHHHHHHHhhcc--cccccCCCceeecCCCCCCCCeEEE
Confidence 00 0 00000001111222111 0111100000000111112234699
Q ss_pred EEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEc
Q 000755 1057 ILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIP 1136 (1300)
Q Consensus 1057 ~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vp 1136 (1300)
++|++++|++. .+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+++ + .+++|+|
T Consensus 327 ~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i~~v~ 393 (556)
T PRK11819 327 AENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKLAYVD 393 (556)
T ss_pred EEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEEEEEe
Confidence 99999999753 599999999999999999999999999999999999999999999954 2 1699999
Q ss_pred CCC-CCCcc-cHHHhcCCCCC-----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1137 QDP-TMFEG-TVRNNLDPLEE-----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1137 Q~~-~lf~g-Tvr~Nl~~~~~-----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
|++ .++.. |+++|+..... ..+.+..++++.+++.+.. .......||||||||++||||++.+
T Consensus 394 q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~qrv~la~al~~~ 463 (556)
T PRK11819 394 QSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGD----------QQKKVGVLSGGERNRLHLAKTLKQG 463 (556)
T ss_pred CchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhH----------hcCchhhCCHHHHHHHHHHHHHhcC
Confidence 997 56654 99999864211 1233455677777764211 1223357899999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeC-CEEEE-ecChhhHHhc
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSH-GIIEE-YDSPTKLLEN 1279 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~-G~i~e-~g~~~~l~~~ 1279 (1300)
|++|||||||++||+.+...+.+.|++. . .|||+|||+++.+.. ||+|++|++ |++.+ .|++++++++
T Consensus 464 p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 464 GNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 9999999999999999999999999986 3 489999999999987 999999986 78874 6788877754
No 46
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.5e-64 Score=678.40 Aligned_cols=541 Identities=20% Similarity=0.193 Sum_probs=405.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 294 LFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMR 373 (1300)
Q Consensus 294 l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir 373 (1300)
.++.+++.+++++++.++..++..+.|+++..+++.+-........+..+++.+++..++..++.....|...+++.++.
T Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~ 898 (1466)
T PTZ00265 819 EIFSYKKDVTIIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVE 898 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667888888889999999999999999998553221111112223333444444455555566667788899999
Q ss_pred HHHHHHHHHHHhcCCchhhcC--CCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000755 374 SVLVSMVYNKGLTLSCQAKQS--YTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLI-LYKNLGLASIAALFA 449 (1300)
Q Consensus 374 ~~L~~~Iy~K~L~ls~~~~~~--~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~l-L~~~lg~~~l~~l~~ 449 (1300)
..++..+|+|.++++...+++ +++|++++++++|++.+.+++.. +..+...++.+++++++ ++..+-++++ +
T Consensus 899 ~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~----~ 974 (1466)
T PTZ00265 899 KTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAV----L 974 (1466)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Confidence 999999999999999998875 89999999999999999986543 33333333333333333 3333322221 1
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHH-----------------HHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHH
Q 000755 450 TVLIMLTNFPLGRLQENF-QDKL-----------------MGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKI 511 (1300)
Q Consensus 450 ~~l~~~~~~~~~k~~~~~-~~~~-----------------~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~ 511 (1300)
++++.++...+.++.+.. .++. .+..++....++|.++||++||.|+.|+.+.+++.+.-+.
T Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~ 1054 (1466)
T PTZ00265 975 TGTYFIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDY 1054 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHH
Confidence 122222222233322211 1111 1123345678999999999999999999999988765443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 512 EAGWLKKFLYTGAMTSFVFWGA--PTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLD 589 (1300)
Q Consensus 512 E~~~l~~~~~~~~~~~~~~~~~--p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~ 589 (1300)
..+...+.....+....+.... ...+.++++|++++..+.++.|.+++++.++.....++..+...+..+.++++|++
T Consensus 1055 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ 1134 (1466)
T PTZ00265 1055 SNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFE 1134 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332222222111111111111 12344567888888899999999998887766666678889999999999999999
Q ss_pred HHHHHhcCCCCCc-ccccCCC---CCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHH
Q 000755 590 RIASFLCLDDLQS-DVVEKHP---RGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCI 665 (1300)
Q Consensus 590 RI~~fL~~~e~~~-~~~~~~~---~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l 665 (1300)
|+.++++.++..+ ....... .....+.|+|+|++|+|+..++.++|+|+||+|++|+++||||+||||||||+++|
T Consensus 1135 ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL 1214 (1466)
T PTZ00265 1135 KYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLL 1214 (1466)
T ss_pred HHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999997653211 1000000 11223579999999999854456899999999999999999999999999999999
Q ss_pred hccccC------------------------------------------------------CccEEEEcCe----------
Q 000755 666 LGEVPK------------------------------------------------------ISGTLKLCGT---------- 681 (1300)
Q Consensus 666 lG~~~~------------------------------------------------------~~G~i~~~g~---------- 681 (1300)
+|+|+| ++|+|.++|.
T Consensus 1215 ~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~l 1294 (1466)
T PTZ00265 1215 MRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDL 1294 (1466)
T ss_pred HHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHH
Confidence 999998 6999999983
Q ss_pred ---EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 682 ---KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 682 ---~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
++||+|+|.||++||+|||.+|+| .++++++++++.++++++++.||+|++|.+||+|.+|||||||||+|||||+
T Consensus 1295 R~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALl 1374 (1466)
T PTZ00265 1295 RNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALL 1374 (1466)
T ss_pred HhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHh
Confidence 699999999999999999999976 6889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhh--cCCcEEEEEecCCCccccCCEEEEEeC----CeEE-EecChHHHHh-
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGL--LRSKTVIYVTHQVEFLPAADLILVMKD----GKIT-QAGKYNDILN- 829 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~--l~~~TvIlvtH~~~~l~~~d~i~~l~~----G~i~-~~g~~~~l~~- 829 (1300)
++|+||||||||||||+++++.|.+ .+... .+++|+|+||||++.+..||+|+||++ |+++ +.|+|+||++
T Consensus 1375 r~p~ILLLDEaTSaLD~~sE~~I~~-~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~ 1453 (1466)
T PTZ00265 1375 REPKILLLDEATSSLDSNSEKLIEK-TIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSV 1453 (1466)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHH-HHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhc
Confidence 9999999999999999999988864 55555 368999999999999999999999999 9955 8999999998
Q ss_pred cCchHHHHHH
Q 000755 830 SGTDFMVLVG 839 (1300)
Q Consensus 830 ~~~~~~~l~~ 839 (1300)
.++.|.+++.
T Consensus 1454 ~~g~Y~~l~~ 1463 (1466)
T PTZ00265 1454 QDGVYKKYVK 1463 (1466)
T ss_pred CCChHHHHHh
Confidence 4788888764
No 47
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.3e-67 Score=644.99 Aligned_cols=438 Identities=21% Similarity=0.286 Sum_probs=335.1
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
-|+++|++++|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLS---DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcC---CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 388999999996 246999999999999999999999999999999999999999999998652 5
Q ss_pred EEEecCCcC---------CCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSPWI---------QSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~~l---------~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|++|++.. +..|++||+.++.. ++++.+++++..++.+.. .....+||||||||++||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHHHHH
Confidence 899998743 14589999876522 234566666666664322 345578999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
||+..+|++|||||||++||+.+.+.+.+. +..+ .+++|+|++||+++.+.. ||+|++|++|+++..|+++++....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAEL-LASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 999999999999999999999999888764 4443 347899999999998865 9999999999999988877654210
Q ss_pred chHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhhhhh
Q 000755 832 TDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVCKAP 911 (1300)
Q Consensus 832 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~sp 911 (1300)
. . .++..
T Consensus 227 ~-----~---------------------------------------------------------------~~~~~----- 233 (490)
T PRK10938 227 L-----V---------------------------------------------------------------AQLAH----- 233 (490)
T ss_pred h-----h---------------------------------------------------------------hhhhh-----
Confidence 0 0 00000
Q ss_pred HHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHH
Q 000755 912 VIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAI 991 (1300)
Q Consensus 912 ~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 991 (1300)
.+
T Consensus 234 -----~~------------------------------------------------------------------------- 235 (490)
T PRK10938 234 -----SE------------------------------------------------------------------------- 235 (490)
T ss_pred -----hh-------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCcc
Q 000755 992 AGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLV 1071 (1300)
Q Consensus 992 ~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~v 1071 (1300)
++.+. ..+.......+.. .+ +....++++|++++|++. .+
T Consensus 236 ---------------------------------~~~~~-~~~~~~~~~~~~~-~~---~~~~~l~~~~l~~~~~~~--~i 275 (490)
T PRK10938 236 ---------------------------------QLEGV-QLPEPDEPSARHA-LP---ANEPRIVLNNGVVSYNDR--PI 275 (490)
T ss_pred ---------------------------------ccCcc-ccCcccccccccc-cC---CCCceEEEeceEEEECCe--eE
Confidence 00000 0000000000000 00 123369999999999753 58
Q ss_pred eeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-CcceEEECCeecCC-CCHHHHhcccEEEcCCCCCCc---ccH
Q 000755 1072 LRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-TAGEIVIDGINISS-IGLHDLRSRLSIIPQDPTMFE---GTV 1146 (1300)
Q Consensus 1072 L~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-~~G~I~idg~di~~-i~~~~lr~~i~~vpQ~~~lf~---gTv 1146 (1300)
|+|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.++|.++.. ......|++++|+||++.++. .|+
T Consensus 276 l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~ 355 (490)
T PRK10938 276 LHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSV 355 (490)
T ss_pred EeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcH
Confidence 9999999999999999999999999999999998876 69999999987632 233456788999999986542 367
Q ss_pred HHhcCCC--C------CCC---HHHHHHHHHHcCCcH-HHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000755 1147 RNNLDPL--E------EYK---DEEIWEALDKCQLGD-EVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLV 1214 (1300)
Q Consensus 1147 r~Nl~~~--~------~~~---d~~i~~~l~~~~l~~-~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLl 1214 (1300)
++++... . ... ++++.++++.+++.+ ... .....||||||||++|||||+.+|++||
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LSgGq~qrv~la~al~~~p~lll 424 (490)
T PRK10938 356 RNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTAD-----------APFHSLSWGQQRLALIVRALVKHPTLLI 424 (490)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhcc-----------CchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 7775321 0 111 235677888888754 322 2335789999999999999999999999
Q ss_pred EeCCCcCCCHHHHHHHHHHHHHhcC-C-cEEEEEeCChhhhhc--cCEEEEEeCCEEEEec
Q 000755 1215 LDEATASVDTATDNLIQQTLRQHFS-D-CTVITIAHRITSVID--SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1215 LDEpTs~lD~~t~~~i~~~l~~~~~-~-~Tvi~iaHrl~~i~~--~D~v~vl~~G~i~e~g 1271 (1300)
|||||++||+.+.+.+.+.|++..+ + .|||+|||+++.+.. ||+|++|++|++++.-
T Consensus 425 LDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 425 LDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred EcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 9999999999999999999998653 3 479999999999975 7999999999998754
No 48
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.1e-67 Score=650.59 Aligned_cols=394 Identities=30% Similarity=0.390 Sum_probs=361.9
Q ss_pred hhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 894 YIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFA 973 (1300)
Q Consensus 894 y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 973 (1300)
..+..|+..+-.....+...++..|++.|++|||+.+.|+++..++.+..+++.+..+.......+......++..+...
T Consensus 313 ~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v 392 (709)
T COG2274 313 FQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSV 392 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666666778888999999999999999999999999999999999999999888888888888887777666
Q ss_pred HHHHHH-HHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCC
Q 000755 974 FSLVLL-ISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTH 1052 (1300)
Q Consensus 974 ~~~~~~-~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~ 1052 (1300)
+.+++. ..+..|.++.|..-.+.+..-.+..++..++..+.+++....+.||+.+.++.|+|.+. +..+...|+.+
T Consensus 393 ~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~---~~~~~~~~~~~ 469 (709)
T COG2274 393 LILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG---DKTLIHLPKLQ 469 (709)
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---ccccccccccC
Confidence 666653 45678899999999999999999999999999999999999999999999999888542 12234456678
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
|.|+++||+|+|+++.|++|+|+|++|++||++||||+||||||||+|+|.|+++|++|+|++||.|++.++++.+|++|
T Consensus 470 g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~i 549 (709)
T COG2274 470 GEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQV 549 (709)
T ss_pred ceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhhe
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1133 SIIPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1133 ~~vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
+|||||+.+|+||||||+.... +.++|++++|++.++.+++|.++|.||||+|+|+|.|||||||||++|||||+++|+
T Consensus 550 g~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ 629 (709)
T COG2274 550 GYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPK 629 (709)
T ss_pred eEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCC
Confidence 9999999999999999998764 567899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHH
Q 000755 1212 VLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~ 1291 (1300)
|||||||||+||++|++.|.+.|.+...++|+|+||||++++..||||+||++|+|+|+|+|+|+++. +|.|+++++.+
T Consensus 630 ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 630 ILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred EEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 99999999999999999999999999889999999999999999999999999999999999999986 89999998754
No 49
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.9e-66 Score=643.05 Aligned_cols=479 Identities=22% Similarity=0.306 Sum_probs=340.5
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCC
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 693 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~ 693 (1300)
-++++|++++|+. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++ .++||+|+|+++.
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5899999999962 35799999999999999999999999999999999999999999999874 6899999999874
Q ss_pred -CCHHHHHhcCCC-------------------CC--------HHHHHHHHHHhcchH-------HHhhccCCCcccccCC
Q 000755 694 -GNIEDNILFGKP-------------------MD--------REKYDRVLEACSLKK-------DLEILSFGDQTVIGER 738 (1300)
Q Consensus 694 -~Ti~eNI~fg~~-------------------~~--------~~~~~~vl~~~~l~~-------dl~~l~~Gd~t~ige~ 738 (1300)
.|++|||.++.. .+ .+++.++++.++... -++.+ |.. .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cccCc
Confidence 599999987531 01 112344455554321 12222 221 23566
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCe
Q 000755 739 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGK 817 (1300)
Q Consensus 739 g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~ 817 (1300)
..+||||||||++||||++.+|+++||||||++||+++...+.+ .+... ++|+|+|||+++++.. ||+|++|++|+
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~-~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~~g~ 235 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQ-HLQEY--PGTVVAVTHDRYFLDNVAGWILELDRGR 235 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEECCE
Confidence 78999999999999999999999999999999999999988865 45443 3699999999999876 89999999999
Q ss_pred EE-EecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhH
Q 000755 818 IT-QAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIP 896 (1300)
Q Consensus 818 i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~ 896 (1300)
++ +.|+++++.+.... ..+... .-|-+
T Consensus 236 i~~~~g~~~~~~~~~~~-------~~~~~~---------------------------------------------~~~~~ 263 (552)
T TIGR03719 236 GIPWEGNYSSWLEQKEK-------RLEQEE---------------------------------------------KEESA 263 (552)
T ss_pred EEEecCCHHHHHHHHHH-------HHHHHH---------------------------------------------HHHHH
Confidence 76 78999887642110 000000 00000
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 897 SARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSL 976 (1300)
Q Consensus 897 ~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 976 (1300)
..+++++.. .|....
T Consensus 264 ~~~~~~~~~----------------------------------------------------~~~~~~------------- 278 (552)
T TIGR03719 264 RQKALKREL----------------------------------------------------EWVRSS------------- 278 (552)
T ss_pred HHHHHHHHH----------------------------------------------------HHHHhh-------------
Confidence 000111000 000000
Q ss_pred HHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEE
Q 000755 977 VLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVD 1056 (1300)
Q Consensus 977 ~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~ 1056 (1300)
..+. .+..+......+++.+. . +..++.......+...-+....++
T Consensus 279 ------~~~~--------------------------~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~ 324 (552)
T TIGR03719 279 ------PKAR--------------------------QAKSKARLARYEELLSQ-E-FQKRNETAEIYIPPGPRLGDKVIE 324 (552)
T ss_pred ------hhhH--------------------------HHHHHHHHHHHHhhhhh-c-ccccCCCceeecCCCCCCCCeEEE
Confidence 0000 00000001111222110 0 000000000000000001234699
Q ss_pred EEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEc
Q 000755 1057 ILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIP 1136 (1300)
Q Consensus 1057 ~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vp 1136 (1300)
++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++ + .+++|+|
T Consensus 325 ~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~----------~~i~~v~ 391 (552)
T TIGR03719 325 AENLSKGFGDK--LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-T----------VKLAYVD 391 (552)
T ss_pred EeeEEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-c----------eEEEEEe
Confidence 99999999753 599999999999999999999999999999999999999999999954 2 1699999
Q ss_pred CCCC-CCc-ccHHHhcCCCC---CC--CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1137 QDPT-MFE-GTVRNNLDPLE---EY--KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1137 Q~~~-lf~-gTvr~Nl~~~~---~~--~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
|++. ++. .|+++|+.... .. .+.+..++++.+++.+.. .......||||||||++|||||+.+
T Consensus 392 q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgGe~qrv~la~al~~~ 461 (552)
T TIGR03719 392 QSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD----------QQKKVGQLSGGERNRVHLAKTLKSG 461 (552)
T ss_pred CCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH----------hcCchhhCCHHHHHHHHHHHHHhhC
Confidence 9973 565 49999986421 11 133455677777764211 1223457999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeC-CEEEE-ecChhhHHh
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSH-GIIEE-YDSPTKLLE 1278 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~-G~i~e-~g~~~~l~~ 1278 (1300)
|++|||||||++||+.+.+.+.+.|++. ..|||+|||+++.+.. ||+|++|++ |++.+ .|+.++..+
T Consensus 462 p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 462 GNVLLLDEPTNDLDVETLRALEEALLEF--AGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 9999999999999999999999999987 3589999999999987 999999997 58774 467766654
No 50
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-63 Score=575.27 Aligned_cols=540 Identities=24% Similarity=0.292 Sum_probs=409.6
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 290 LTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGERE-FKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVA 368 (1300)
Q Consensus 290 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~-~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 368 (1300)
+++.+.+ .|+.++++++++++..++....-.+-..+|....-... .....++-+++.=...+..+...+.-...++..
T Consensus 7 ~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~A 85 (573)
T COG4987 7 YLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDA 85 (573)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 4444555 77777777777777666655444444555543221111 111122223333333445566666666667778
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 000755 369 GIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPWLVILQVSLALLI--LYKNLGLASIAA 446 (1300)
Q Consensus 369 g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~l--L~~~lg~~~l~~ 446 (1300)
..++-+.|+..+|+|...+++....+.++|+++|++..|++.+++++.....+|...+-++.++.+ -+..++.+.+.+
T Consensus 86 tfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~ 165 (573)
T COG4987 86 TFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLG 165 (573)
T ss_pred HHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999988888777655544433 366777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH---HH
Q 000755 447 LFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLY---TG 523 (1300)
Q Consensus 447 l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~---~~ 523 (1300)
+...+..+++...+.+..++..++..+.+....+.+.|.+.|+...+++|.++.+.+.+++. |..|.+.... ..
T Consensus 166 ~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~---e~~~~~~q~k~~~~~ 242 (573)
T COG4987 166 LILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEAT---EASWLKAQRKQARFT 242 (573)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 77666666677777788888888888888888899999999999999999999998877543 3333332211 11
Q ss_pred HHHHHH-HHHHHHHHH-HHHHHHHHHhcCCcCH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCC
Q 000755 524 AMTSFV-FWGAPTFVS-VATFGACMLLGIPLES-GKILSALATFRILQEPIYNL-PDTISMIIQTKVSLDRIASFLCLDD 599 (1300)
Q Consensus 524 ~~~~~~-~~~~p~~v~-~~~f~~~~~~~~~Lt~-g~vft~lal~~~l~~pl~~l-p~~i~~~~~a~vs~~RI~~fL~~~e 599 (1300)
....+. ......++. .+.+.++..-.+..+. ..+...++.|..+ +++..+ |.++....++..|.+|+.+.++.++
T Consensus 243 ~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~-eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~ 321 (573)
T COG4987 243 GLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAAL-EAFEPLAPGAFQHLGQVIASARRLNDILDQKP 321 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHH-HHHhhhcchhHHHhhHHHHHHHHHhhhccCCc
Confidence 111111 111111222 1112222122233332 2222222222222 333333 3788899999999999999987765
Q ss_pred CCcccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEc
Q 000755 600 LQSDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 679 (1300)
Q Consensus 600 ~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~ 679 (1300)
......+..+. .+..++++|++|+|+. .+.++|+|+||++++||++||+|+||||||||+++|.|-++|++|+|..+
T Consensus 322 e~~~~~~~~~~--~~~~l~~~~vsF~y~~-~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~ 398 (573)
T COG4987 322 EVTFPDEQTAT--TGQALELRNVSFTYPG-QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLN 398 (573)
T ss_pred ccCCCccccCC--ccceeeeccceeecCC-CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeEC
Confidence 44332111111 1227999999999984 45689999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHH
Q 000755 680 G-------------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGG 745 (1300)
Q Consensus 680 g-------------~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGG 745 (1300)
| .+++++|.+.+|++|+|||+.+++| .++|+.+++++.++|++.++..|+|++|.+||.|..||||
T Consensus 399 g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGG 478 (573)
T COG4987 399 GVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGG 478 (573)
T ss_pred CcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCch
Confidence 8 3588999999999999999999998 5889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChH
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 825 (1300)
||||++|||++++|++++||||||.+||+.|++++.+ .+...+++||+|+||||+..++.||+|++|++|+|++.|+|.
T Consensus 479 E~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~-ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~ 557 (573)
T COG4987 479 ERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLA-LLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHA 557 (573)
T ss_pred HHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHH-HHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHH
Confidence 9999999999999999999999999999999999986 455667899999999999999999999999999999999999
Q ss_pred HHHhcCchHHHHH
Q 000755 826 DILNSGTDFMVLV 838 (1300)
Q Consensus 826 ~l~~~~~~~~~l~ 838 (1300)
+++.+++.|.++.
T Consensus 558 ~Ll~~~g~~~~l~ 570 (573)
T COG4987 558 ELLANNGRYKRLY 570 (573)
T ss_pred hhhccccHHHHHh
Confidence 9999888887764
No 51
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-65 Score=640.71 Aligned_cols=478 Identities=19% Similarity=0.277 Sum_probs=333.6
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCCC
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSG 694 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~~ 694 (1300)
|.++|++++|. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++| .++|++|++..+..
T Consensus 2 i~i~nls~~~g---~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~~~~ 78 (638)
T PRK10636 2 IVFSSLQIRRG---VRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPALPQ 78 (638)
T ss_pred EEEEEEEEEeC---CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCC
Confidence 68999999995 35799999999999999999999999999999999999999999999987 47999997655556
Q ss_pred CHHHHHhcCCC-C--------------CHHHHHHHHH---H-------hcchHHHhhccCCCc-ccccCCCCCCCHHHHH
Q 000755 695 NIEDNILFGKP-M--------------DREKYDRVLE---A-------CSLKKDLEILSFGDQ-TVIGERGINLSGGQKQ 748 (1300)
Q Consensus 695 Ti~eNI~fg~~-~--------------~~~~~~~vl~---~-------~~l~~dl~~l~~Gd~-t~ige~g~~LSGGQkq 748 (1300)
|+.+++.-+.. + +...|..... . .....-++.+ |.. ........+|||||||
T Consensus 79 ~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l--gl~~~~~~~~~~~LSgGerq 156 (638)
T PRK10636 79 PALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGL--GFSNEQLERPVSDFSGGWRM 156 (638)
T ss_pred CHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhC--CCCchhhcCchhhcCHHHHH
Confidence 76666542210 0 0001100000 0 0001112222 221 1234566789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEE-EecChHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKIT-QAGKYND 826 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~-~~g~~~~ 826 (1300)
|++|||||..+|++|||||||++||+.+..++.+ .+... +.|+|+|||+++++.. ||+|++|++|++. +.|+|++
T Consensus 157 Rv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~-~L~~~--~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~ 233 (638)
T PRK10636 157 RLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEK-WLKSY--QGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSS 233 (638)
T ss_pred HHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHH
Confidence 9999999999999999999999999999888754 44443 5799999999999876 9999999999996 6899988
Q ss_pred HHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHh
Q 000755 827 ILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVG 906 (1300)
Q Consensus 827 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~ 906 (1300)
+........ .... +.|.+..+++++..
T Consensus 234 ~~~~~~~~~---~~~~-------------------------------------------------~~~~~~~~~~~~~~- 260 (638)
T PRK10636 234 FEVQRATRL---AQQQ-------------------------------------------------AMYESQQERVAHLQ- 260 (638)
T ss_pred HHHHHHHHH---HHHH-------------------------------------------------HHHHHHHHHHHHHH-
Confidence 764211000 0000 00101111111110
Q ss_pred hhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000755 907 VCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGV 986 (1300)
Q Consensus 907 ~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~ 986 (1300)
.|..++.. ++.
T Consensus 261 ---------------------------~~i~r~~~------~a~------------------------------------ 271 (638)
T PRK10636 261 ---------------------------SYIDRFRA------KAT------------------------------------ 271 (638)
T ss_pred ---------------------------HHHHHhhh------hhh------------------------------------
Confidence 00000000 000
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCC
Q 000755 987 IEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAP 1066 (1300)
Q Consensus 987 ~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~ 1066 (1300)
.....+......+|+... . +.+......-..+++.-+....|+++|++++|++
T Consensus 272 -------------------------~~~~a~~r~~~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~ 324 (638)
T PRK10636 272 -------------------------KAKQAQSRIKMLERMELI-A-PAHVDNPFHFSFRAPESLPNPLLKMEKVSAGYGD 324 (638)
T ss_pred -------------------------hHHHHHHHHHHHHHhhcc-c-ccccCCceeEecCCCccCCCceEEEEeeEEEeCC
Confidence 000000011112222210 0 1100000000001111112346999999999975
Q ss_pred CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCC--CCCc-
Q 000755 1067 HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDP--TMFE- 1143 (1300)
Q Consensus 1067 ~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~--~lf~- 1143 (1300)
..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .+++|+||++ .+..
T Consensus 325 --~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~igy~~Q~~~~~l~~~ 391 (638)
T PRK10636 325 --RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLGYFAQHQLEFLRAD 391 (638)
T ss_pred --eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEEEecCcchhhCCcc
Confidence 35999999999999999999999999999999999999999999999741 2699999985 2333
Q ss_pred ccHHHhcCC-CCCCCHHHHHHHHHHcCCcH-HHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcC
Q 000755 1144 GTVRNNLDP-LEEYKDEEIWEALDKCQLGD-EVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATAS 1221 (1300)
Q Consensus 1144 gTvr~Nl~~-~~~~~d~~i~~~l~~~~l~~-~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~ 1221 (1300)
.|+.+++.. .....++++.++|+.+++.. ...+ ....||||||||++|||+++++|++|||||||++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~-----------~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~ 460 (638)
T PRK10636 392 ESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTE-----------ETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNH 460 (638)
T ss_pred chHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcC-----------chhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 378887632 22233556778888888753 2222 2357899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEE-EecChhhHH
Q 000755 1222 VDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIE-EYDSPTKLL 1277 (1300)
Q Consensus 1222 lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~-e~g~~~~l~ 1277 (1300)
||+.+...+.+.|++. +.|||+|||++..+.. ||+|++|++|+++ ..|++++..
T Consensus 461 LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 461 LDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred CCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 9999999999999986 4599999999999987 9999999999997 678888874
No 52
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.1e-62 Score=667.46 Aligned_cols=549 Identities=16% Similarity=0.154 Sum_probs=400.7
Q ss_pred chhHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 288 FKLTKALFFSAWKEI-VFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQ 366 (1300)
Q Consensus 288 ~~l~~~l~~~~~~~~-~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 366 (1300)
.+.++.+++..++.. ++.+++.++..++....|+.++...+............+.+ .++++..++..++.....+...
T Consensus 952 ~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~-~iy~~l~i~~~~~~~~~~~~~~ 1030 (1522)
T TIGR00957 952 LSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRL-SVYGALGILQGFAVFGYSMAVS 1030 (1522)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 345555665543322 23333444455566677877776665321110011111111 1111222222222222334445
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 367 VAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASIA 445 (1300)
Q Consensus 367 ~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l~ 445 (1300)
..+.+.-..+...+|++.++.+...+++.++|+|+|++++|++.+++.+. .+..+...++.++.++++++....+.+++
T Consensus 1031 ~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~ 1110 (1522)
T TIGR00957 1031 IGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVI 1110 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788888889999999999999999999999999999999999998654 34444555555555555444333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 446 ALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAM 525 (1300)
Q Consensus 446 ~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~ 525 (1300)
.+.++++...+..++.+..+..++...+.++...+.++|.++|+++||.|++|+.|.++..+..+...+..........+
T Consensus 1111 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1522)
T TIGR00957 1111 IPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRW 1190 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23233333333333444444444555556677789999999999999999999999888766544433322211111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000755 526 TSFVFWGAPTFVSVATFGACMLL-GIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 526 ~~~~~~~~p~~v~~~~f~~~~~~-~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 604 (1300)
..........+ .++..+.+.+. .+.+++|.+..++.+...+..|+..+...+..+.++.+|.+||.++++.+++.+..
T Consensus 1191 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~ 1269 (1522)
T TIGR00957 1191 LAVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQ 1269 (1522)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 11111111111 11222233333 46799999999999999999999999999999999999999999999765433211
Q ss_pred c-cCCCCC--CCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe
Q 000755 605 V-EKHPRG--SSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT 681 (1300)
Q Consensus 605 ~-~~~~~~--~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~ 681 (1300)
. ...+.. +.++.|+|+|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+|+++|++|+|.++|.
T Consensus 1270 ~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~ 1348 (1522)
T TIGR00957 1270 IQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGL 1348 (1522)
T ss_pred ccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCE
Confidence 1 111111 234679999999999743 357999999999999999999999999999999999999999999999983
Q ss_pred -------------EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 682 -------------KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 682 -------------~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
++||||+|.+|+|||||||....++++++.+++++.|++++.++.+|+|++|.+||+|.+|||||||
T Consensus 1349 dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQ 1428 (1522)
T TIGR00957 1349 NIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQ 1428 (1522)
T ss_pred EccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHH
Confidence 6999999999999999999843478999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
|++||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++.+..||+|+||++|+|++.|+|+||+
T Consensus 1429 rl~LARALLr~~~ILiLDEaTSalD~~Te~~I-q~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl 1507 (1522)
T TIGR00957 1429 LVCLARALLRKTKILVLDEATAAVDLETDNLI-QSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLL 1507 (1522)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999998777 55677777899999999999999999999999999999999999999
Q ss_pred hcCchHHHHHHH
Q 000755 829 NSGTDFMVLVGA 840 (1300)
Q Consensus 829 ~~~~~~~~l~~~ 840 (1300)
+.++.|.+++.+
T Consensus 1508 ~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1508 QQRGIFYSMAKD 1519 (1522)
T ss_pred hCCCHHHHHHHH
Confidence 888888887653
No 53
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-64 Score=563.45 Aligned_cols=457 Identities=26% Similarity=0.433 Sum_probs=357.5
Q ss_pred ceEEEEeEEEEecCC-CCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC--------
Q 000755 615 TAIEIVDGNFAWDIS-SNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG-------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g-------- 680 (1300)
.-++++|.+.++..+ ....++++|||+|++||.+|+||+||||||--.+.++|+++. -+|+|..+|
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 357889988888633 345789999999999999999999999999999999999975 368998877
Q ss_pred ---------eEEEEecCCcC-CC--CCHHHH----HhcCCCCC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000755 681 ---------TKAYVAQSPWI-QS--GNIEDN----ILFGKPMD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGI 740 (1300)
Q Consensus 681 ---------~~ayv~Q~~~l-~~--~Ti~eN----I~fg~~~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~ 740 (1300)
+|++++|+|-- .| -||... |...+.++ +++..+.++..++.+-- ..+..-..
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~--------~rl~~yPH 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPE--------KRLDAYPH 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchh--------hhhhhCCc
Confidence 47999999964 22 355444 44444333 34445555555554321 12233446
Q ss_pred CCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCe
Q 000755 741 NLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGK 817 (1300)
Q Consensus 741 ~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~ 817 (1300)
.|||||||||.||.||..+|++||-||||.|||..+..+|.+ ++..+- .|-.+++|||++..... ||+|+||.+|+
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~-Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ 235 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILD-LLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGE 235 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHH-HHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccE
Confidence 899999999999999999999999999999999999999975 454432 37899999999999887 99999999999
Q ss_pred EEEecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHH
Q 000755 818 ITQAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPS 897 (1300)
Q Consensus 818 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~ 897 (1300)
+++.|+.+++......- |-
T Consensus 236 ivE~~~t~~lF~~PqHp-----------------------------------------------------------YT-- 254 (534)
T COG4172 236 IVETGTTETLFAAPQHP-----------------------------------------------------------YT-- 254 (534)
T ss_pred EeecCcHHHHhhCCCCh-----------------------------------------------------------HH--
Confidence 99999988876532210 00
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 898 ARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLV 977 (1300)
Q Consensus 898 ~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 977 (1300)
|.
T Consensus 255 -r~----------------------------------------------------------------------------- 256 (534)
T COG4172 255 -RK----------------------------------------------------------------------------- 256 (534)
T ss_pred -HH-----------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEE
Q 000755 978 LLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDI 1057 (1300)
Q Consensus 978 ~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~ 1057 (1300)
. +..||. ...+|..-....-++.
T Consensus 257 ---------------------------------------------------L--l~aeP~----g~~~p~~~~~~~ll~~ 279 (534)
T COG4172 257 ---------------------------------------------------L--LAAEPS----GDPPPLPEDAPVLLEV 279 (534)
T ss_pred ---------------------------------------------------H--HhcCCC----CCCCCCCCCCCceEEe
Confidence 0 001221 1111111123346899
Q ss_pred EeeeeeeCCCC---------CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH-
Q 000755 1058 LNLQVRYAPHL---------PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD- 1127 (1300)
Q Consensus 1058 ~~v~~~y~~~~---------~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~- 1127 (1300)
+|+.+.|+-+. -.+.++|||++++||.+||||.||||||||-.+|+|+++++ |+|.++|.+|...+.++
T Consensus 280 ~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~m 358 (534)
T COG4172 280 EDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEM 358 (534)
T ss_pred cceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhh
Confidence 99999985321 24789999999999999999999999999999999999987 99999999999888766
Q ss_pred --HhcccEEEcCCCC--CC-cccHHHhcC----CCC-CC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCC
Q 000755 1128 --LRSRLSIIPQDPT--MF-EGTVRNNLD----PLE-EY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWS 1193 (1300)
Q Consensus 1128 --lr~~i~~vpQ~~~--lf-~gTvr~Nl~----~~~-~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LS 1193 (1300)
+|+++-+|+|||+ |- ..||.+-+. ... .. .|+.+.++|+.+||+..... .....+|
T Consensus 359 rplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~----------RYPhEFS 428 (534)
T COG4172 359 RPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRN----------RYPHEFS 428 (534)
T ss_pred hhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhh----------cCCcccC
Confidence 6889999999996 22 237766552 111 22 35568889999999765433 2346789
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEe
Q 000755 1194 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1194 gGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~ 1270 (1300)
||||||++||||++-+|++++||||||+||..-...|.+.+++.. .+-+-++||||+..+.. ||+|+||.+|+|+|+
T Consensus 429 GGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~ 508 (534)
T COG4172 429 GGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQ 508 (534)
T ss_pred cchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeee
Confidence 999999999999999999999999999999999999999999864 36799999999999988 999999999999999
Q ss_pred cChhhHHhcCCChHHHH
Q 000755 1271 DSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1271 g~~~~l~~~~~~~f~~l 1287 (1300)
|+.+++++++...|.+-
T Consensus 509 G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 509 GPTEAVFANPQHEYTRA 525 (534)
T ss_pred CCHHHHhcCCCcHHHHH
Confidence 99999999998877653
No 54
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.2e-64 Score=628.05 Aligned_cols=392 Identities=31% Similarity=0.432 Sum_probs=337.9
Q ss_pred hhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 894 YIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFA 973 (1300)
Q Consensus 894 y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 973 (1300)
+.+..++..+......+.+.+.+.|+++|.++||+|+.++...+++.+..+...+...........+.....++..+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (567)
T COG1132 172 LARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTV 251 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345677777777788999999999999999999999997777766666655554433333333333333344333333
Q ss_pred HHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCC
Q 000755 974 FSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTH 1052 (1300)
Q Consensus 974 ~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~ 1052 (1300)
+.+.+ ...+..+.++.|.+..++.|...+..++..+...+..++....|.||+.++.+.+++.. +...+ .++..
T Consensus 252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~--~~~~~ 326 (567)
T COG1132 252 LVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVE---DPPDP--LKDTI 326 (567)
T ss_pred HHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc---CCCCC--CCCCC
Confidence 33222 23345677889999999999999999999999999999999999999999998755422 11111 23456
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
+.|+++||+|+|+++ +++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||+||++++..++|++|
T Consensus 327 ~~I~f~~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I 405 (567)
T COG1132 327 GSIEFENVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRI 405 (567)
T ss_pred CeEEEEEEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhc
Confidence 889999999999863 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCcccHHHhcCCCCC-CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1133 SIIPQDPTMFEGTVRNNLDPLEE-YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1133 ~~vpQ~~~lf~gTvr~Nl~~~~~-~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
++|||||.+|++||++|+.+..+ .+|+|++++++.++++|++.++|+|+||.|||+|.+||||||||+|||||++++|+
T Consensus 406 ~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ 485 (567)
T COG1132 406 GIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPP 485 (567)
T ss_pred cEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998865 79999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHH
Q 000755 1212 VLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~ 1291 (1300)
|||||||||+||++|++.|++.+++..+++|+|+||||++++.+||+|+||++|+|+|+|+|+||+++ +|.|++||+++
T Consensus 486 ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~ 564 (567)
T COG1132 486 ILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQ 564 (567)
T ss_pred EEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHh
Confidence 99999999999999999999999988788999999999999999999999999999999999999986 89999999987
Q ss_pred h
Q 000755 1292 T 1292 (1300)
Q Consensus 1292 ~ 1292 (1300)
.
T Consensus 565 ~ 565 (567)
T COG1132 565 G 565 (567)
T ss_pred h
Confidence 5
No 55
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.4e-62 Score=564.07 Aligned_cols=520 Identities=21% Similarity=0.261 Sum_probs=414.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000755 313 TLANYVGPYLIDTFVQYLNGEREFK---NEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVSMVYNKGLTLSC 389 (1300)
Q Consensus 313 ~~~~~~~P~ll~~li~~l~~~~~~~---~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~ 389 (1300)
-......|++++..++.++..+..+ ......+.+++++.+..+.+.-...+....+..++-......+|++.+.++.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4566778999999999886322211 1233455666677777777777777777788888888888999999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000755 390 QAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASIAALF-ATVLIMLTNFPLGRLQENF 467 (1300)
Q Consensus 390 ~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~-~~~l~~~~~~~~~k~~~~~ 467 (1300)
..+.+..+|++.+.|..-...|.++.. .+..+....+.+.+....+++..|.+..+... .+.....+.....+...++
T Consensus 123 ~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~f 202 (591)
T KOG0057|consen 123 SFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRF 202 (591)
T ss_pred HhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHH
Confidence 999999999999999988888888754 34555666677888888899999976544333 3333334455567788889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000755 468 QDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIE-LRKIEAGWLKKFLYTGAMTSFVFWGAPT-FVSVATFGAC 545 (1300)
Q Consensus 468 ~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~-~R~~E~~~l~~~~~~~~~~~~~~~~~p~-~v~~~~f~~~ 545 (1300)
++++.++.++-.+..-+.|.|..+||.|+-|+...++... +++.|...++....+...+..--....+ .+.++..+..
T Consensus 203 R~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~ 282 (591)
T KOG0057|consen 203 RKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSN 282 (591)
T ss_pred HHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998888755 3555544433332222211111111111 1112222222
Q ss_pred HHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcceEEEEeEEEE
Q 000755 546 MLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSETAIEIVDGNFA 625 (1300)
Q Consensus 546 ~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~i~~~~fs 625 (1300)
-+.++.+|.+.+....+++.+|..|+..+...+..+.|+..-..-+...+..++... ....+....++.|+|+|++|+
T Consensus 283 gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~--~~~~~i~~~~~~I~F~dV~f~ 360 (591)
T KOG0057|consen 283 GIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQ--EAALPIELFGGSIEFDDVHFS 360 (591)
T ss_pred hhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhh--hccCCcccCCCcEEEEeeEEE
Confidence 345668999999999999999999999999999999988877765544332222111 111222334557999999999
Q ss_pred ecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EEEEecCCcCC
Q 000755 626 WDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWIQ 692 (1300)
Q Consensus 626 ~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ayv~Q~~~l~ 692 (1300)
|++ ++++|+++||+|++||++||+|+|||||||++++|+++++ ++|+|.++|. |||||||..||
T Consensus 361 y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF 437 (591)
T KOG0057|consen 361 YGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF 437 (591)
T ss_pred eCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCccccc
Confidence 973 4679999999999999999999999999999999999999 9999999994 69999999999
Q ss_pred CCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCC
Q 000755 693 SGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSA 771 (1300)
Q Consensus 693 ~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~sa 771 (1300)
|+||.+||.+|++ ..+|+..++++..++++-+..+|+|++|.+||+|..|||||||||+||||+++||+|+++|||||+
T Consensus 438 ndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~ 517 (591)
T KOG0057|consen 438 NDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSA 517 (591)
T ss_pred chhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccc
Confidence 9999999999998 578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHHH
Q 000755 772 VDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVLV 838 (1300)
Q Consensus 772 LD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~ 838 (1300)
||.+|++.+++. ++..+.+||+|+|.||+..++.||+|++++||++.+.|+|+|++..++.|.++.
T Consensus 518 LD~~TE~~i~~~-i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w 583 (591)
T KOG0057|consen 518 LDSETEREILDM-IMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLW 583 (591)
T ss_pred cchhhHHHHHHH-HHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHh
Confidence 999999999864 566788999999999999999999999999999999999999999777776664
No 56
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2e-63 Score=626.86 Aligned_cols=476 Identities=21% Similarity=0.306 Sum_probs=330.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--EEEEecCCcC-C
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--KAYVAQSPWI-Q 692 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--~ayv~Q~~~l-~ 692 (1300)
.|+++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++|++|.+.. .
T Consensus 3 ~l~i~~ls~~~~---~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~~~ 79 (635)
T PRK11147 3 LISIHGAWLSFS---DAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPRNV 79 (635)
T ss_pred EEEEeeEEEEeC---CceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCCCC
Confidence 488999999996 357999999999999999999999999999999999999999999999874 6899998743 3
Q ss_pred CCCHHHHHhcCCCC-------------------CHHH---HHHH---HHH-------hcchHHHhhccCCCcccccCCCC
Q 000755 693 SGNIEDNILFGKPM-------------------DREK---YDRV---LEA-------CSLKKDLEILSFGDQTVIGERGI 740 (1300)
Q Consensus 693 ~~Ti~eNI~fg~~~-------------------~~~~---~~~v---l~~-------~~l~~dl~~l~~Gd~t~ige~g~ 740 (1300)
.+++.+++..+... ..+. +..+ ++. .....-++.+ |.. ......
T Consensus 80 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--gl~--~~~~~~ 155 (635)
T PRK11147 80 EGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQL--GLD--PDAALS 155 (635)
T ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhC--CCC--CCCchh
Confidence 46888776432110 0000 0000 000 0011112222 221 145567
Q ss_pred CCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEE
Q 000755 741 NLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKIT 819 (1300)
Q Consensus 741 ~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~ 819 (1300)
+|||||||||+|||||+.+|+||||||||++||+.+..++.+ .+..+ +.|+|+|||+++++.. ||+|++|++|+++
T Consensus 156 ~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~-~L~~~--~~tvlivsHd~~~l~~~~d~i~~L~~G~i~ 232 (635)
T PRK11147 156 SLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEG-FLKTF--QGSIIFISHDRSFIRNMATRIVDLDRGKLV 232 (635)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHH-HHHhC--CCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 899999999999999999999999999999999999888764 45544 3699999999999976 9999999999997
Q ss_pred -EecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHH
Q 000755 820 -QAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSA 898 (1300)
Q Consensus 820 -~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~ 898 (1300)
+.|+|++++......... .. .-|....
T Consensus 233 ~~~g~~~~~~~~~~~~~~~---~~-------------------------------------------------~~~~~~~ 260 (635)
T PRK11147 233 SYPGNYDQYLLEKEEALRV---EE-------------------------------------------------LQNAEFD 260 (635)
T ss_pred EecCCHHHHHHHHHHHHHH---HH-------------------------------------------------HHHHHHH
Confidence 579998876532110000 00 0000000
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVL 978 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 978 (1300)
++++++. .+.++. .++...
T Consensus 261 ~~~~~~~----------------------------~~~~~~-------~~a~~~-------------------------- 279 (635)
T PRK11147 261 RKLAQEE----------------------------VWIRQG-------IKARRT-------------------------- 279 (635)
T ss_pred HHHHHHH----------------------------HHHHhh-------hhhhhh--------------------------
Confidence 1111100 000000 000000
Q ss_pred HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCCCCCCccccCCCCCCCCCCceEEE
Q 000755 979 LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQ-YTCISSEPPLVIEESRPDCSWPTHGEVDI 1057 (1300)
Q Consensus 979 ~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~-~~~~~~e~~~~~~~~~~~~~wp~~g~i~~ 1057 (1300)
.. .......+++.. -.. +.+......-..++..-+....|++
T Consensus 280 --------------------------------~~----~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 322 (635)
T PRK11147 280 --------------------------------RN----EGRVRALKALRRERSE-RREVMGTAKMQVEEASRSGKIVFEM 322 (635)
T ss_pred --------------------------------hH----HHHHHHHHHhhhhhcc-ccccCCceeEEeCCCCCCCCceEEE
Confidence 00 000000111110 000 0000000000001111112335899
Q ss_pred EeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcC
Q 000755 1058 LNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQ 1137 (1300)
Q Consensus 1058 ~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ 1137 (1300)
+|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+ |.++ +++|++|
T Consensus 323 ~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~y~~q 389 (635)
T PRK11147 323 ENVNYQIDGK--QLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVAYFDQ 389 (635)
T ss_pred eeeEEEECCe--EEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEEEEeC
Confidence 9999999753 5999999999999999999999999999999999999999999999 4332 5999999
Q ss_pred CC-CCCcc-cHHHhcCCCC-CC--C--HHHHHHHHHHcCCcH-HHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1138 DP-TMFEG-TVRNNLDPLE-EY--K--DEEIWEALDKCQLGD-EVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1138 ~~-~lf~g-Tvr~Nl~~~~-~~--~--d~~i~~~l~~~~l~~-~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
++ .+++. ||.+|+.... .. . +.++.+.++.+++.. ...+ ....||||||||++||||++.+
T Consensus 390 ~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LSgGekqRl~la~al~~~ 458 (635)
T PRK11147 390 HRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMT-----------PVKALSGGERNRLLLARLFLKP 458 (635)
T ss_pred cccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhC-----------hhhhCCHHHHHHHHHHHHHhcC
Confidence 86 46654 9999986421 11 1 345667787777642 2222 2356899999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEe-CCEEEEe-cChhhHH
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLS-HGIIEEY-DSPTKLL 1277 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~-~G~i~e~-g~~~~l~ 1277 (1300)
|++|||||||++||+.+...+.+.|++. ++|||+|||+.+.+.. ||+|++|+ +|++.++ |+..+.+
T Consensus 459 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~ 527 (635)
T PRK11147 459 SNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDAR 527 (635)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHH
Confidence 9999999999999999999999999876 5699999999999987 99999998 8999875 5666654
No 57
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-61 Score=655.04 Aligned_cols=548 Identities=15% Similarity=0.156 Sum_probs=382.2
Q ss_pred chhHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 288 FKLTKALFFSAWKE--IVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRL 365 (1300)
Q Consensus 288 ~~l~~~l~~~~~~~--~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~ 365 (1300)
.+.++.+++..+.. +++.+++.++..++....|+.++...+....... ....| ++++++..++..++.....+..
T Consensus 901 ~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~~~~--~~i~~~l~~~~~i~~~~~~~~~ 977 (1622)
T PLN03130 901 WKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTH-GPLFY--NLIYALLSFGQVLVTLLNSYWL 977 (1622)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC-chhHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555543322 1222333334455556667777766654222111 11111 1122222233333333333445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 366 QVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASI 444 (1300)
Q Consensus 366 ~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l 444 (1300)
.+.+.+.-..+...+|++.++.+...++++++|+|+|++++|++.+++... .+.......+.++.+++++.....+..+
T Consensus 978 ~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~ 1057 (1622)
T PLN03130 978 IMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLW 1057 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888899999999999999999999999999999999999988643 3444444444444444333222112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 445 AALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGA 524 (1300)
Q Consensus 445 ~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~ 524 (1300)
+.+.++++++.+..+..+..+..++..+..+....+.++|.++|+++||.|++|+.|.++..+..+...+..........
T Consensus 1058 ~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 1137 (1622)
T PLN03130 1058 AIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNR 1137 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222333333444444455566677889999999999999999998887765544433322111110001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000755 525 MTSFVFWGAPTFVSVATFGACMLL-GIPLE-----SGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLD 598 (1300)
Q Consensus 525 ~~~~~~~~~p~~v~~~~f~~~~~~-~~~Lt-----~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~ 598 (1300)
+..+.......++ +...+.+.+. ++... ++.+-.++++...+..++..+...+..+.++.+|++|+.++++.|
T Consensus 1138 wl~~~l~~~~~~~-i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~ 1216 (1622)
T PLN03130 1138 WLAIRLETLGGLM-IWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLP 1216 (1622)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1111000011111 1111122222 22111 233333344455566777777777888899999999999999776
Q ss_pred CCCccccc-CCCCC--CCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccE
Q 000755 599 DLQSDVVE-KHPRG--SSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGT 675 (1300)
Q Consensus 599 e~~~~~~~-~~~~~--~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~ 675 (1300)
++.+...+ ..+.. +.++.|+|+|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+|+++|++|+
T Consensus 1217 ~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~ 1295 (1622)
T PLN03130 1217 SEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGR 1295 (1622)
T ss_pred CcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCce
Confidence 54322111 11111 234579999999999743 357999999999999999999999999999999999999999999
Q ss_pred EEEcCe-------------EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCC
Q 000755 676 LKLCGT-------------KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINL 742 (1300)
Q Consensus 676 i~~~g~-------------~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~L 742 (1300)
|.++|. ++||||+|.+|+|||||||.++.++++++.+++++.|++++.++.+|+|++|.+||+|.||
T Consensus 1296 I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nL 1375 (1622)
T PLN03130 1296 ILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENF 1375 (1622)
T ss_pred EEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCC
Confidence 999983 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEec
Q 000755 743 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAG 822 (1300)
Q Consensus 743 SGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g 822 (1300)
||||||||+||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+|+||++.+..||+|+||++|+|++.|
T Consensus 1376 SgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~I-q~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~G 1454 (1622)
T PLN03130 1376 SVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALI-QKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFD 1454 (1622)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999998877 56677777899999999999999999999999999999999
Q ss_pred ChHHHHhc-CchHHHHHHHH
Q 000755 823 KYNDILNS-GTDFMVLVGAH 841 (1300)
Q Consensus 823 ~~~~l~~~-~~~~~~l~~~~ 841 (1300)
+|+||++. ++.|.+++...
T Consensus 1455 t~~eLl~~~~g~f~~L~~~~ 1474 (1622)
T PLN03130 1455 TPENLLSNEGSAFSKMVQST 1474 (1622)
T ss_pred CHHHHHhCCCCHHHHHHHHc
Confidence 99999986 57888887543
No 58
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.2e-63 Score=599.58 Aligned_cols=485 Identities=23% Similarity=0.320 Sum_probs=352.1
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCC
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 693 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~ 693 (1300)
.|.++|++++|+ ++++|+|+||++.+|++++|||+||+||||||++|.|+..|++|+|...+ +++|++|++....
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 488999999994 57899999999999999999999999999999999999999999999987 7999999999985
Q ss_pred -CCHHHHHhcCCCCC---HHHHHHHHH---------------------HhcchHHHhhcc--CCCcccccCCCCCCCHHH
Q 000755 694 -GNIEDNILFGKPMD---REKYDRVLE---------------------ACSLKKDLEILS--FGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 694 -~Ti~eNI~fg~~~~---~~~~~~vl~---------------------~~~l~~dl~~l~--~Gd~t~ige~g~~LSGGQ 746 (1300)
.|+.|.+.-|...- ..+++.+.. .-.++.+++..- .|.... .....+|||||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LSGG~ 158 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLSGGW 158 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcCHHH
Confidence 49999998875311 111222111 001112222111 222222 45667899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEE-EecCh
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKIT-QAGKY 824 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~-~~g~~ 824 (1300)
|.|++|||||..+||+|||||||++||..+..++- +.+.. .+| |+|+|||+.+||+. |++|+.+++|++. +.|+|
T Consensus 159 r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe-~~L~~-~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny 235 (530)
T COG0488 159 RRRVALARALLEEPDLLLLDEPTNHLDLESIEWLE-DYLKR-YPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNY 235 (530)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHH-HHHHh-CCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCH
Confidence 99999999999999999999999999999988774 44443 345 99999999999997 9999999999876 88999
Q ss_pred HHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHH
Q 000755 825 NDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRL 904 (1300)
Q Consensus 825 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl 904 (1300)
+.+++....-..... +.|.+...+++++
T Consensus 236 ~~~~~~r~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~ 263 (530)
T COG0488 236 SSYLEQKAERLRQEA----------------------------------------------------AAYEKQQKELAKE 263 (530)
T ss_pred HHHHHHHHHHHHHHH----------------------------------------------------HHHHHHHHHHHHH
Confidence 988754321110000 0000000011110
Q ss_pred HhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000755 905 VGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPK 984 (1300)
Q Consensus 905 ~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~ 984 (1300)
..|.+++......
T Consensus 264 ----------------------------~~~i~r~~~~~~~--------------------------------------- 276 (530)
T COG0488 264 ----------------------------QEWIRRGKAAASK--------------------------------------- 276 (530)
T ss_pred ----------------------------HHHHHHHHhccch---------------------------------------
Confidence 0111111000000
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCCCCCCccccCCCCCC-CCCCceEEEEeee
Q 000755 985 GVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQY--TCISSEPPLVIEESRPDCS-WPTHGEVDILNLQ 1061 (1300)
Q Consensus 985 g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~--~~~~~e~~~~~~~~~~~~~-wp~~g~i~~~~v~ 1061 (1300)
...-+..+...+|+.+. ...|........-..++.. -.....++++|++
T Consensus 277 ----------------------------~k~a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~ 328 (530)
T COG0488 277 ----------------------------AKKAKSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVS 328 (530)
T ss_pred ----------------------------HHHHHHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccc
Confidence 00112233334444421 1111111100000011111 1234568999999
Q ss_pred eeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCC-C
Q 000755 1062 VRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDP-T 1140 (1300)
Q Consensus 1062 ~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~-~ 1140 (1300)
+.|++. .++++++||.|.+|++||||||||+|||||+++|.|...|.+|+|.+.- . -++||.+|+. .
T Consensus 329 ~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~-~----------v~igyf~Q~~~~ 396 (530)
T COG0488 329 KGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE-T----------VKIGYFDQHRDE 396 (530)
T ss_pred cccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC-c----------eEEEEEEehhhh
Confidence 999765 5699999999999999999999999999999999999999999999853 1 2699999998 3
Q ss_pred CCc-ccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 000755 1141 MFE-GTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEA 1218 (1300)
Q Consensus 1141 lf~-gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEp 1218 (1300)
++. .|+-+++.... ...+.++...|.+.++...-.. .....||||||-|+.||+.++.+|.+||||||
T Consensus 397 l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~----------~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEP 466 (530)
T COG0488 397 LDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQE----------KPVGVLSGGEKARLLLAKLLLQPPNLLLLDEP 466 (530)
T ss_pred cCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHh----------CchhhcCHhHHHHHHHHHHhccCCCEEEEcCC
Confidence 443 38999886433 3347889999999998654222 22356999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEe-cChhhHHhc
Q 000755 1219 TASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEY-DSPTKLLEN 1279 (1300)
Q Consensus 1219 Ts~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~-g~~~~l~~~ 1279 (1300)
|++||.++.+.+.++|.++ ..|||+||||...+.. |++|+++++ ++.++ |+.++..+.
T Consensus 467 TNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 467 TNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred CccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 9999999999999999887 6799999999999998 999999999 77777 777776653
No 59
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.1e-61 Score=648.31 Aligned_cols=475 Identities=17% Similarity=0.178 Sum_probs=356.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHH
Q 000755 363 FRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLILYKNLGL 441 (1300)
Q Consensus 363 ~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~lL~~~lg~ 441 (1300)
+...+.+.+.-..+...+|++.++.+...++++++|+++|++++|++.+++.+.. +..+....++++.+++++.....+
T Consensus 972 ~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~ 1051 (1495)
T PLN03232 972 FWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTI 1051 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345677788888888999999999999999999999999999999999986543 333334444444444333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 442 ASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLY 521 (1300)
Q Consensus 442 ~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~ 521 (1300)
..++.+.+.++++.+..+..+..+..++.....+....+.++|.++|+++||.|++|+.|.++..+..+...+.......
T Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1131 (1495)
T PLN03232 1052 SLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTS 1131 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222222222333444555566667778889999999999999999999888766554433332221111
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHhc-CCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 522 TGAMTSFVFWGAPTFVSVATF-GACMLLG-IPLE-----SGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASF 594 (1300)
Q Consensus 522 ~~~~~~~~~~~~p~~v~~~~f-~~~~~~~-~~Lt-----~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~f 594 (1300)
...+..+..... ...++.+ +.+.+.. +.+. ++.+-.++++...+..|+..+...+..+..+.+|++||.++
T Consensus 1132 ~~~wl~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~ 1209 (1495)
T PLN03232 1132 SNRWLTIRLETL--GGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNY 1209 (1495)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111100000 0111112 2222222 2221 22233345566677889999999999999999999999999
Q ss_pred hcCCCCCccccc-CCCC--CCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC
Q 000755 595 LCLDDLQSDVVE-KHPR--GSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK 671 (1300)
Q Consensus 595 L~~~e~~~~~~~-~~~~--~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~ 671 (1300)
++.++..+...+ ..+. .+..+.|+++|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+|+++|
T Consensus 1210 ~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p 1288 (1495)
T PLN03232 1210 IDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL 1288 (1495)
T ss_pred hcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC
Confidence 976644322111 1111 1234579999999999643 36899999999999999999999999999999999999999
Q ss_pred CccEEEEcCe-------------EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000755 672 ISGTLKLCGT-------------KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGER 738 (1300)
Q Consensus 672 ~~G~i~~~g~-------------~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~ 738 (1300)
++|+|.++|. ++||||+|.+|+|||||||.++.++++++.+++++.|+++++++.+|+|++|.+||+
T Consensus 1289 ~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1289 EKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred CCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 9999999983 599999999999999999999988999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeE
Q 000755 739 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKI 818 (1300)
Q Consensus 739 g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i 818 (1300)
|.+|||||||||+||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++.+..||+|+||++|+|
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~I-q~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~i 1447 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLI-QRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQV 1447 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHH-HHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999998877 5567777789999999999999999999999999999
Q ss_pred EEecChHHHHhcCc-hHHHHHHHH
Q 000755 819 TQAGKYNDILNSGT-DFMVLVGAH 841 (1300)
Q Consensus 819 ~~~g~~~~l~~~~~-~~~~l~~~~ 841 (1300)
++.|+|+||++.++ .|.+++...
T Consensus 1448 vE~Gt~~eLl~~~~~~f~~l~~~~ 1471 (1495)
T PLN03232 1448 LEYDSPQELLSRDTSAFFRMVHST 1471 (1495)
T ss_pred EEECCHHHHHhCCCCHHHHHHHHh
Confidence 99999999998764 788877543
No 60
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.8e-63 Score=664.45 Aligned_cols=251 Identities=20% Similarity=0.253 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHHHHHHhh--cCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeC--CCCCcceeeeeEEeeCCcEEEEE
Q 000755 1013 LCNLENKIISVERILQYT--CISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYA--PHLPLVLRGLTCTFPGGMKTGIV 1088 (1300)
Q Consensus 1013 ~~~le~~~~sveRi~~~~--~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~--~~~~~vL~~isl~i~~Ge~vgIv 1088 (1300)
..+.|+.+.++||..++. +.+.|.+.......++.. .....++++||+++|+ ++.+.+|+|||+++++||++||+
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~ 795 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKE-SGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALM 795 (1394)
T ss_pred ccccccccccccccccCCCCcccccccccccccccccc-CCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEE
Confidence 346677788999998763 333343322111112211 1122479999999985 23457999999999999999999
Q ss_pred CCCCCcHHHHHHHHhcCCC---CCcceEEECCeecCCCCHHHHhcccEEEcCCCCCC-cccHHHhcCCC------CCCCH
Q 000755 1089 GRTGSGKSTLIQTLFRIVE---PTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMF-EGTVRNNLDPL------EEYKD 1158 (1300)
Q Consensus 1089 G~tGsGKSTLl~~L~gl~~---p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf-~gTvr~Nl~~~------~~~~d 1158 (1300)
||||||||||+++|+|+.+ |++|+|.+||.++. .++|++++||||++.++ ..|||||+.+. ...++
T Consensus 796 G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~ 871 (1394)
T TIGR00956 796 GASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSK 871 (1394)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCH
Confidence 9999999999999999998 78999999999984 25788999999997654 56999999742 12333
Q ss_pred H----HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC-EEEEeCCCcCCCHHHHHHHHHH
Q 000755 1159 E----EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK-VLVLDEATASVDTATDNLIQQT 1233 (1300)
Q Consensus 1159 ~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~-iLlLDEpTs~lD~~t~~~i~~~ 1233 (1300)
+ .+.++++..++.+ ..|+.+++.|.+||||||||++|||||+.+|+ ||+|||||+|||..+...|++.
T Consensus 872 ~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~ 944 (1394)
T TIGR00956 872 SEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKL 944 (1394)
T ss_pred HHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHH
Confidence 3 3567888887754 36888998888999999999999999999997 9999999999999999999999
Q ss_pred HHHhc-CCcEEEEEeCChhhh--hccCEEEEEeCC-EEEEecChhh
Q 000755 1234 LRQHF-SDCTVITIAHRITSV--IDSDMVLLLSHG-IIEEYDSPTK 1275 (1300)
Q Consensus 1234 l~~~~-~~~Tvi~iaHrl~~i--~~~D~v~vl~~G-~i~e~g~~~~ 1275 (1300)
|++.. +++|||+++|+++.. ..||+|++|++| +++++|++.+
T Consensus 945 L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 945 MRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99874 579999999999974 459999999997 9999998743
No 61
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.9e-62 Score=614.56 Aligned_cols=393 Identities=20% Similarity=0.283 Sum_probs=322.1
Q ss_pred hhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 894 YIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFA 973 (1300)
Q Consensus 894 y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 973 (1300)
+.+..++..+......+...+.+.|.++|+.+||+|+.|+++.+++.+..++..+..........+......++..+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (588)
T PRK11174 183 VGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIA 262 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555556677888999999999999999999999999988887776666554444433333333333333222
Q ss_pred HHHHHHHHhcCCcccHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCC
Q 000755 974 FSLVLLISIPKGVIEPAI---------AGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESR 1044 (1300)
Q Consensus 974 ~~~~~~~~~~~g~~~~~~---------~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~ 1044 (1300)
+.+++......|.++.|. +.+++.+...+..++..+...+..+.....+.+|+.++++.+++++. +...
T Consensus 263 ~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~--~~~~ 340 (588)
T PRK11174 263 LVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQ--QGEK 340 (588)
T ss_pred HHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC--CCcc
Confidence 221111111124444332 22333555666778888888889999999999999999987654321 1110
Q ss_pred CCCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC
Q 000755 1045 PDCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG 1124 (1300)
Q Consensus 1045 ~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~ 1124 (1300)
+...+..+.|+++||++.|.++ +++|+|+||+|++||++||||+||||||||+++|+|++ |++|+|.+||+|+.+++
T Consensus 341 -~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~ 417 (588)
T PRK11174 341 -ELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELD 417 (588)
T ss_pred -ccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCC
Confidence 1111234679999999877654 56999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHhcccEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1125 LHDLRSRLSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1125 ~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
.+++|++|+||||||.+|+||||||+.+. ++++|++++++++.+++++++.++|+|+||.+||+|.+||||||||++||
T Consensus 418 ~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialA 497 (588)
T PRK11174 418 PESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALA 497 (588)
T ss_pred HHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999887 46899999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCCh
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSS 1283 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~ 1283 (1300)
||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++..||+|+||++|+++|.|+|++|+++ ++.
T Consensus 498 RAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~~eL~~~-~~~ 576 (588)
T PRK11174 498 RALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDYAELSQA-GGL 576 (588)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCHHHHHhc-chH
Confidence 9999999999999999999999999999999998889999999999999999999999999999999999999975 679
Q ss_pred HHHHHHHHh
Q 000755 1284 FAQLVAEYT 1292 (1300)
Q Consensus 1284 f~~l~~~~~ 1292 (1300)
|+++++.+.
T Consensus 577 y~~l~~~q~ 585 (588)
T PRK11174 577 FATLLAHRQ 585 (588)
T ss_pred HHHHHHHhh
Confidence 999987764
No 62
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4e-62 Score=622.80 Aligned_cols=384 Identities=22% Similarity=0.295 Sum_probs=338.8
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVL 978 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 978 (1300)
+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..+.......|.......+..+...+.+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~ 379 (686)
T TIGR03797 300 VRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAA 379 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556778999999999999999999999999999998888888777777777776666555554433333333
Q ss_pred -HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEE
Q 000755 979 -LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDI 1057 (1300)
Q Consensus 979 -~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~ 1057 (1300)
...+..|.++.|.+..+.++...+..++..+...+.+++....+.+|+.++++.++|.+. ...+ ..+..|.|++
T Consensus 380 g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~---~~~~--~~~~~~~I~~ 454 (686)
T TIGR03797 380 AISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE---AKTD--PGKLSGAIEV 454 (686)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---CcCC--CCCCCceEEE
Confidence 233457889999999999999999999999999999999999999999999987665431 1111 1123578999
Q ss_pred EeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcC
Q 000755 1058 LNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQ 1137 (1300)
Q Consensus 1058 ~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ 1137 (1300)
+||+|+|+++.+++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 455 ~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 534 (686)
T TIGR03797 455 DRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQ 534 (686)
T ss_pred EEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEcc
Confidence 99999997665779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000755 1138 DPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1217 (1300)
Q Consensus 1138 ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDE 1217 (1300)
||.+|+||||||+.+....+|++++++++.+++++++.++|.|+||.++|+|.+||||||||++||||++++|+||||||
T Consensus 535 ~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDE 614 (686)
T TIGR03797 535 NGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDE 614 (686)
T ss_pred CCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999999998876689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHH
Q 000755 1218 ATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAE 1290 (1300)
Q Consensus 1218 pTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~ 1290 (1300)
|||+||+++++.|.+.|++. ++|+|+||||++++..||+|+||++|+|+|.|+|++|+++ ++.|++|+++
T Consensus 615 pTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~ 684 (686)
T TIGR03797 615 ATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARR 684 (686)
T ss_pred CccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHh
Confidence 99999999999999999986 6899999999999999999999999999999999999974 7899999875
No 63
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-62 Score=551.25 Aligned_cols=532 Identities=21% Similarity=0.286 Sum_probs=394.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhh-HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 305 TAILALLYTLANYVGPYLIDTFVQYLNGEREFKNE-GYVLVSTFFVAKIV--ECLAQRHWMFRLQVAGIKMRSVLVSMVY 381 (1300)
Q Consensus 305 ~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~-g~~l~~~l~~~~~~--~~l~~~~~~~~~~~~g~~ir~~L~~~Iy 381 (1300)
..++.++.-++....|.+.+.+++.+.....+... .+.++...|+-... ..+......|..-++..--...+-..+|
T Consensus 220 cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lf 299 (790)
T KOG0056|consen 220 CLFLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELF 299 (790)
T ss_pred HHHHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHH
Confidence 33444555566677799999999988743322221 12222222221111 1122222222223333344455677889
Q ss_pred HHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000755 382 NKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLILYKNLG-LASIAALFATVLIMLTNFP 459 (1300)
Q Consensus 382 ~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~lL~~~lg-~~~l~~l~~~~l~~~~~~~ 459 (1300)
+|.+.||....-.+.+||++..|....+.+. +..+ ..++-...+.++++++.++.... |-.++.+..+++..-+...
T Consensus 300 rHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~ 378 (790)
T KOG0056|consen 300 RHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIK 378 (790)
T ss_pred HHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeee
Confidence 9999999988888899999998877666665 3322 22333334455555554433222 2222223333333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 460 LGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKI----IELRKIEAGWLKKFLYTGAMTSFVFWGAPT 535 (1300)
Q Consensus 460 ~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i----~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~ 535 (1300)
+.....++++++..+-.+-...-.+.+-|.+++|.|+.|+...++. .+..+.|-+.+....++......++ .-.
T Consensus 379 iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii--~lg 456 (790)
T KOG0056|consen 379 ITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGII--GLG 456 (790)
T ss_pred eehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--hhH
Confidence 5555666676666655555556678899999999999998766554 3344444443332222211111110 111
Q ss_pred HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 000755 536 FVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSET 615 (1300)
Q Consensus 536 ~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~ 615 (1300)
++....+.+|.+..+.++.|...-+..++..++.|++.+...+..++...+-.+|+.+.+.+++...+.....|.....+
T Consensus 457 ll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G 536 (790)
T KOG0056|consen 457 LLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQG 536 (790)
T ss_pred HhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCC
Confidence 22223344566667789999999999999999999999999999999999999999999976554333332233334567
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.|+++|++|+|++ .+|+|+||||++.||+.+|+|||+|+||||++++|.++++..+|.|.++|+ |
T Consensus 537 ~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~I 614 (790)
T KOG0056|consen 537 KIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSI 614 (790)
T ss_pred eEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhc
Confidence 8999999999984 579999999999999999999999999999999999999999999999994 6
Q ss_pred EEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 000755 683 AYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDAD 761 (1300)
Q Consensus 683 ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ 761 (1300)
|.||||..+||+||..||.+|+| ...|+..++.++++.++.|-.+|+|++|.+||||-.||||+|||+|+||+++++|.
T Consensus 615 GVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~ 694 (790)
T KOG0056|consen 615 GVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPS 694 (790)
T ss_pred CcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCc
Confidence 99999999999999999999998 46788888999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc-CchHHHHHHH
Q 000755 762 IYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS-GTDFMVLVGA 840 (1300)
Q Consensus 762 illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~l~~~ 840 (1300)
|++|||+|||||.+|++.| +.++..+..++|.|+|.||++.+-+||.|++++||+|+|.|+|+|++++ ++.|.++..+
T Consensus 695 iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 695 IILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 9999999999999999988 6788888899999999999999999999999999999999999999987 7889888765
Q ss_pred HH
Q 000755 841 HQ 842 (1300)
Q Consensus 841 ~~ 842 (1300)
++
T Consensus 774 qq 775 (790)
T KOG0056|consen 774 QQ 775 (790)
T ss_pred HH
Confidence 44
No 64
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.1e-60 Score=639.54 Aligned_cols=471 Identities=15% Similarity=0.153 Sum_probs=360.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 369 GIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLASIAAL 447 (1300)
Q Consensus 369 g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l 447 (1300)
+.+....+...+|++.++.+...++++++|+|+|++++|++.+.+++. .+..+....+.++.++++++....+.+++.+
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i 1105 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALV 1105 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445677889999999999999999999999999999999998654 3444444455555444444333223222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 448 FATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTS 527 (1300)
Q Consensus 448 ~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 527 (1300)
.++++...+...+.+..+..++.....++...+.++|.++|+++||.|++|+.|.++..+.-+...+..........+..
T Consensus 1106 ~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~ 1185 (1560)
T PTZ00243 1106 PCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLG 1185 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233333444555555555666777788999999999999999999999888875543332222111111111111
Q ss_pred HH-HHH-HHHHHHHHHHHHH--HHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-
Q 000755 528 FV-FWG-APTFVSVATFGAC--MLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQS- 602 (1300)
Q Consensus 528 ~~-~~~-~p~~v~~~~f~~~--~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~- 602 (1300)
+. ... ....+.++.++++ ......+++|.+..++.+...+..|+..+...+..+.++..|++||.++++..+.++
T Consensus 1186 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~ 1265 (1560)
T PTZ00243 1186 VRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDM 1265 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 11 111 1111122222222 222345788988888888888999999999999999999999999999996322110
Q ss_pred cc-----------------------c-cCC-----CCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcC
Q 000755 603 DV-----------------------V-EKH-----PRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGT 653 (1300)
Q Consensus 603 ~~-----------------------~-~~~-----~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~ 653 (1300)
.. . ... +.....+.|+|+|++|+|+++ .+++|+|+||+|++||++||||+
T Consensus 1266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGr 1344 (1560)
T PTZ00243 1266 PELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGR 1344 (1560)
T ss_pred ccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECC
Confidence 00 0 000 011123579999999999743 35699999999999999999999
Q ss_pred CCCChHHHHHHHhccccCCccEEEEcCe-------------EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcc
Q 000755 654 VGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSL 720 (1300)
Q Consensus 654 ~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l 720 (1300)
+|||||||+++|+|+++|++|+|.++|. ++||||+|.+|+|||||||..+.++++++++++++.|++
T Consensus 1345 TGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l 1424 (1560)
T PTZ00243 1345 TGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGL 1424 (1560)
T ss_pred CCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999984 599999999999999999998778899999999999999
Q ss_pred hHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC-CCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEec
Q 000755 721 KKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD-ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTH 799 (1300)
Q Consensus 721 ~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~-~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH 799 (1300)
++.++.+|+|++|.+||+|.||||||||||+|||||+++ |+|+|||||||+||++|++.| ++.+....+++|+|+|+|
T Consensus 1425 ~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~I-q~~L~~~~~~~TvI~IAH 1503 (1560)
T PTZ00243 1425 RERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQI-QATVMSAFSAYTVITIAH 1503 (1560)
T ss_pred hHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHH-HHHHHHHCCCCEEEEEec
Confidence 999999999999999999999999999999999999996 899999999999999998888 456777778999999999
Q ss_pred CCCccccCCEEEEEeCCeEEEecChHHHHhc-CchHHHHHHHH
Q 000755 800 QVEFLPAADLILVMKDGKITQAGKYNDILNS-GTDFMVLVGAH 841 (1300)
Q Consensus 800 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~l~~~~ 841 (1300)
|++.+..||+|+||++|+|++.|+|+||++. ++.|..++...
T Consensus 1504 Rl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1504 RLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred cHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 9999999999999999999999999999974 77888887543
No 65
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.2e-61 Score=610.83 Aligned_cols=478 Identities=19% Similarity=0.270 Sum_probs=322.5
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCeEEEEecCCcCCCC
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSG 694 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~~ayv~Q~~~l~~~ 694 (1300)
..|+++|++|+|+ ++++|+|+||+|++|++++|||+|||||||||++|+|+.. .| +.-+|+++|++|++.-.+.
T Consensus 176 ~~I~i~nls~~y~---~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~--~g-~p~~g~I~~~~Q~~~g~~~ 249 (718)
T PLN03073 176 KDIHMENFSISVG---GRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAI--DG-IPKNCQILHVEQEVVGDDT 249 (718)
T ss_pred eeEEEceEEEEeC---CCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CC-CCCCCEEEEEeccCCCCCC
Confidence 4699999999996 3469999999999999999999999999999999999741 13 2234678888887543333
Q ss_pred CHHHHHhcC-------------------------------------CCCC--HHHHHHHHHHhcch----------HHHh
Q 000755 695 NIEDNILFG-------------------------------------KPMD--REKYDRVLEACSLK----------KDLE 725 (1300)
Q Consensus 695 Ti~eNI~fg-------------------------------------~~~~--~~~~~~vl~~~~l~----------~dl~ 725 (1300)
|+.+.+.-. .+.+ .+++.++.+...+. .-+.
T Consensus 250 t~~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~L~ 329 (718)
T PLN03073 250 TALQCVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDKDAVSQRLEEIYKRLELIDAYTAEARAASILA 329 (718)
T ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 543332110 0000 02222222222111 1111
Q ss_pred hccCCCc-ccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcc
Q 000755 726 ILSFGDQ-TVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFL 804 (1300)
Q Consensus 726 ~l~~Gd~-t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l 804 (1300)
.+ |.. ........+||||||||++|||||+.+|++|||||||++||+.+..++.+ .+..+ ++|+|+|||+++++
T Consensus 330 ~l--gl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~-~L~~~--~~tviivsHd~~~l 404 (718)
T PLN03073 330 GL--SFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLET-YLLKW--PKTFIVVSHAREFL 404 (718)
T ss_pred HC--CCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHH-HHHHc--CCEEEEEECCHHHH
Confidence 11 211 11234457899999999999999999999999999999999999888865 45543 68999999999999
Q ss_pred cc-CCEEEEEeCCeEE-EecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccc
Q 000755 805 PA-ADLILVMKDGKIT-QAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNE 882 (1300)
Q Consensus 805 ~~-~d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grn 882 (1300)
.. ||+|++|++|++. +.|+|+++......... ..
T Consensus 405 ~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~---~~----------------------------------------- 440 (718)
T PLN03073 405 NTVVTDILHLHGQKLVTYKGDYDTFERTREEQLK---NQ----------------------------------------- 440 (718)
T ss_pred HHhCCEEEEEECCEEEEeCCCHHHHHHHHHHHHH---HH-----------------------------------------
Confidence 87 9999999999996 78998876532110000 00
Q ss_pred cccccchhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 000755 883 DIQTDKVDEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCF 962 (1300)
Q Consensus 883 r~s~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 962 (1300)
++-|-+..++.+++.. |..++.... .+.
T Consensus 441 --------~~~~e~~~k~~~~l~~----------------------------~i~~~~~~a---~~~------------- 468 (718)
T PLN03073 441 --------QKAFESNERSRSHMQA----------------------------FIDKFRYNA---KRA------------- 468 (718)
T ss_pred --------HHHHHHHHHHHHHHHH----------------------------HHHHhhhhh---hhh-------------
Confidence 0001011111111110 000000000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccc
Q 000755 963 RLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEE 1042 (1300)
Q Consensus 963 ~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~ 1042 (1300)
...+......+|+......+.+++....
T Consensus 469 ---------------------------------------------------~~~~s~~k~l~~~~~~~~~~~~~~~~~~- 496 (718)
T PLN03073 469 ---------------------------------------------------SLVQSRIKALDRLGHVDAVVNDPDYKFE- 496 (718)
T ss_pred ---------------------------------------------------HHHhhcchHHHHHhhhhccccCCCceee-
Confidence 0000001112232221111111110000
Q ss_pred CCCCCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC
Q 000755 1043 SRPDCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS 1122 (1300)
Q Consensus 1043 ~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~ 1122 (1300)
..++..++....++++|++++|+++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++
T Consensus 497 ~~~~~~~~~~~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~----- 570 (718)
T PLN03073 497 FPTPDDRPGPPIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA----- 570 (718)
T ss_pred cCCCccCCCCceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----
Confidence 0001112333579999999999643 3589999999999999999999999999999999999999999999875
Q ss_pred CCHHHHhcccEEEcCCCCCCcccHHHhcC-----CCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1123 IGLHDLRSRLSIIPQDPTMFEGTVRNNLD-----PLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1123 i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~-----~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
+.+++|+||++. ...++.+|.. ......++++.++|+.+++.+... ......||||||
T Consensus 571 ------~~~igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~----------~~~~~~LSgGqk 633 (718)
T PLN03073 571 ------KVRMAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLA----------LQPMYTLSGGQK 633 (718)
T ss_pred ------ceeEEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHh----------cCCccccCHHHH
Confidence 347999999863 2224444421 122345677888999998863221 123467999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEE-EecChhh
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIE-EYDSPTK 1275 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~-e~g~~~~ 1275 (1300)
||++||||++.+|++|||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ ..|++++
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~ 711 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHD 711 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHH
Confidence 9999999999999999999999999999999999999875 3599999999999987 9999999999998 4677665
Q ss_pred H
Q 000755 1276 L 1276 (1300)
Q Consensus 1276 l 1276 (1300)
.
T Consensus 712 ~ 712 (718)
T PLN03073 712 Y 712 (718)
T ss_pred H
Confidence 4
No 66
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=4.4e-62 Score=622.57 Aligned_cols=385 Identities=26% Similarity=0.364 Sum_probs=325.0
Q ss_pred hHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHH---HHHHHHHHHHHHHHH
Q 000755 895 IPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGA---MEWLCFRLDMLSSLT 971 (1300)
Q Consensus 895 ~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~---~~wl~~~l~~~~~~~ 971 (1300)
.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+........ ..|....+..+..+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (711)
T TIGR00958 322 GKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVL 401 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455556677889999999999999999999999888888877766554433322 223322222222211
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCC
Q 000755 972 FAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPT 1051 (1300)
Q Consensus 972 ~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~ 1051 (1300)
+. .+....+..|.+++|.+..++.|...+..++..+...+.++++...+.+|+.++++.+++.+.. . ....++.
T Consensus 402 il--~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~-~~~~~~~ 475 (711)
T TIGR00958 402 VL--YYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT---G-TLAPLNL 475 (711)
T ss_pred HH--HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC---C-CCCCCCC
Confidence 11 1112335578899999999999999999999999999999999999999999999876553211 1 1112345
Q ss_pred CceEEEEeeeeeeCCC-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhc
Q 000755 1052 HGEVDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRS 1130 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~ 1130 (1300)
.+.|+++||+|+|+++ .+++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||+|+++++.+++|+
T Consensus 476 ~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~ 555 (711)
T TIGR00958 476 EGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHR 555 (711)
T ss_pred CCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHh
Confidence 6789999999999753 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1131 RLSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
+|+||||||.+|++||||||.+. .+.+|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++
T Consensus 556 ~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~ 635 (711)
T TIGR00958 556 QVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRK 635 (711)
T ss_pred hceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999865 46789999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHH
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~ 1288 (1300)
|+|||||||||+||+++++.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|++|+++ ++.|++|+
T Consensus 636 p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~-~~~y~~lv 711 (711)
T TIGR00958 636 PRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMED-QGCYKHLV 711 (711)
T ss_pred CCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhC-CCchHhcC
Confidence 99999999999999999999999 334578999999999999999999999999999999999999975 57888764
No 67
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-62 Score=567.09 Aligned_cols=386 Identities=24% Similarity=0.360 Sum_probs=333.6
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000755 897 SARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFS- 975 (1300)
Q Consensus 897 ~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~- 975 (1300)
.+|...+--...++.+.++|.|.++|....+.||++++|.+......+...+..........|-.+.+.++..+.+...
T Consensus 182 ~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l 261 (573)
T COG4987 182 AGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLL 261 (573)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555556678889999999999999999999999999999999999888888888999999988888887766633
Q ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCc-
Q 000755 976 LVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVI-WNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHG- 1053 (1300)
Q Consensus 976 ~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~-~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g- 1053 (1300)
++.......|..+...+.+++...+.....+.-+. ..+.++.....|..|+.+..+.++|.... .+ ..|..+
T Consensus 262 ~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~-~~-----~~~~~~~ 335 (573)
T COG4987 262 LWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFP-DE-----QTATTGQ 335 (573)
T ss_pred HHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCC-cc-----ccCCccc
Confidence 33334456666653333333333233333333333 55678888999999999988776664322 11 112222
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++||+|+|+++.+++|+|+||++++||||||+||||||||||+++|.|.++|++|+|.++|.++..++.+++|+.|+
T Consensus 336 ~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~ 415 (573)
T COG4987 336 ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETIS 415 (573)
T ss_pred eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHh
Confidence 79999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000755 1134 IIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKV 1212 (1300)
Q Consensus 1134 ~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~i 1212 (1300)
+++|.+++|++|+|+||... .+.+||++|++|+++||.+.+++.|+||+|.+||+|.+||||||||++|||+||++.++
T Consensus 416 vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl 495 (573)
T COG4987 416 VLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPL 495 (573)
T ss_pred hhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCe
Confidence 99999999999999999764 46899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHH
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVA 1289 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~ 1289 (1300)
++|||||.|||+.|++.+.+.|.+..+|+|+|+||||+..++.||||+||++|+++|+|+|++|++ ++|.|+++++
T Consensus 496 ~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 496 WLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred EEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999998 5799999875
No 68
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-61 Score=570.48 Aligned_cols=388 Identities=25% Similarity=0.347 Sum_probs=336.1
Q ss_pred HHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000755 901 LSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLL- 979 (1300)
Q Consensus 901 l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~- 979 (1300)
..+-.-.+...+.+||-+.++|+.|+|+|+..+...++..+...++.+.........---+..+|++.++.++.+++..
T Consensus 167 ~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g 246 (559)
T COG4988 167 ASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIG 246 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444556788999999999999999999998888888877777766655555544446778888888777776664
Q ss_pred HHhcC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEE
Q 000755 980 ISIPK-GVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDIL 1058 (1300)
Q Consensus 980 ~~~~~-g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~ 1058 (1300)
..+.. |.++-...-+++..+.-+..++..+...+..-.+...+.+.+..+.+.|.+.+... ......|....+++.+
T Consensus 247 ~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~--~~~~~~~~~~~ei~~~ 324 (559)
T COG4988 247 FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSG--EKAEVANEPPIEISLE 324 (559)
T ss_pred HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc--cccccccCCCceeeec
Confidence 33334 67777777777777888888888888888888888899999999988776643211 1112233334567777
Q ss_pred eeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCC
Q 000755 1059 NLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQD 1138 (1300)
Q Consensus 1059 ~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~ 1138 (1300)
|++++|+++. ++++|+||++++|++++|||+||||||||+++|+|+.+|++|+|.+||+|+.+++.+.+|+++++|||+
T Consensus 325 ~l~~~y~~g~-~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~ 403 (559)
T COG4988 325 NLSFRYPDGK-PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQN 403 (559)
T ss_pred ceEEecCCCC-cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCC
Confidence 9999998764 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000755 1139 PTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1217 (1300)
Q Consensus 1139 ~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDE 1217 (1300)
|++|+||+|||+.+.. +.+|++++++++++++.++++. |+||||.+||+|.+|||||+|||+||||++++++++++||
T Consensus 404 p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDE 482 (559)
T COG4988 404 PYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDE 482 (559)
T ss_pred CccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecC
Confidence 9999999999998765 4889999999999999999999 9999999999999999999999999999999999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHhh
Q 000755 1218 ATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQ 1293 (1300)
Q Consensus 1218 pTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~~ 1293 (1300)
|||+||.+|++.|.+.|.+.++++|||+||||++.+.++|+|+||++|+++|.|+|++|.++ ++.|++|++++..
T Consensus 483 pTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~~ 557 (559)
T COG4988 483 PTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQEG 557 (559)
T ss_pred CccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999974 7899999988654
No 69
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.9e-60 Score=631.20 Aligned_cols=216 Identities=16% Similarity=0.209 Sum_probs=187.7
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
...|+++|++++|+++...+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+ ...+.|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997543469999999999999999999999999999999999999999999999999865 45667889
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
|||+||++.+++. |++||+.... .... +.+.++++.+++.+..++.+ ..||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~-----------~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLA-----------GTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999988865 9999986421 1222 23556788888876544433 46899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||+.+|+||+|||||+|||+.+++.+.+.|++.. +++|||++||++++++. ||||++|++|+++..|+++++.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999998864 57899999999999988 999999999999999999999654
No 70
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.9e-61 Score=619.28 Aligned_cols=390 Identities=24% Similarity=0.346 Sum_probs=337.5
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 896 PSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFS 975 (1300)
Q Consensus 896 ~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~ 975 (1300)
+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..++..+..........+.......+..+...+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i 394 (710)
T TIGR03796 315 RRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALI 394 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444455566788999999999999999999999999999888877777666666666666555555544433333
Q ss_pred HHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccc--C-CCCCCCCC
Q 000755 976 LVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEE--S-RPDCSWPT 1051 (1300)
Q Consensus 976 ~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~--~-~~~~~wp~ 1051 (1300)
+++ ...+..|.++.|.+..+.++...+..++..+...+.+++....+.+|+.++++.++|.+..... . .....++.
T Consensus 395 l~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~ 474 (710)
T TIGR03796 395 LVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRL 474 (710)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCC
Confidence 333 2345678899999999999999999999999999999999999999999999887664321100 0 01111344
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
.|.|+++||+|+|++..+++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++
T Consensus 475 ~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 554 (710)
T TIGR03796 475 SGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANS 554 (710)
T ss_pred CCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhh
Confidence 67899999999998766679999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1132 LSIIPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1132 i~~vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
++||||||.+|+||||||+.+.. +.+|++++++++.+++++++.++|+|+||.++|+|.+||||||||++||||++++|
T Consensus 555 i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p 634 (710)
T TIGR03796 555 VAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNP 634 (710)
T ss_pred eeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999998764 68999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHH
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~ 1288 (1300)
+|||||||||+||++|++.|.+.|++ .++|+|+||||++++..||||++|++|+|+|.|+|++|+++ ++.|++|+
T Consensus 635 ~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 635 SILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 99999999999999999999999987 48999999999999999999999999999999999999974 68899886
No 71
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.6e-61 Score=604.84 Aligned_cols=388 Identities=28% Similarity=0.388 Sum_probs=332.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000755 898 ARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWL-CFRLDMLSSLTFAFSL 976 (1300)
Q Consensus 898 ~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~~ 976 (1300)
.+...+......+...+++.|+++|+.+||+|+.++++.+++.+..++..+..........+. .....++..+...+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (592)
T PRK10790 189 STPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLL 268 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444566788899999999999999999999999888877766555544333333222 2223333322222222
Q ss_pred HHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEE
Q 000755 977 VLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVD 1056 (1300)
Q Consensus 977 ~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~ 1056 (1300)
++......|.++.|.+.+++.|...+..++..+...+..+++...+.+|+.++++.++++.. .. ..++..+.|+
T Consensus 269 ~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~---~~~~~~~~i~ 342 (592)
T PRK10790 269 MLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG---ND---DRPLQSGRID 342 (592)
T ss_pred HHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC---CC---ccCCCCCeEE
Confidence 22222457889999999999999999999999999999999999999999999876544221 11 1123457899
Q ss_pred EEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEc
Q 000755 1057 ILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIP 1136 (1300)
Q Consensus 1057 ~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vp 1136 (1300)
++|++++|+++ +++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+.+|++|+|||
T Consensus 343 ~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~ 421 (592)
T PRK10790 343 IDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQ 421 (592)
T ss_pred EEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEc
Confidence 99999999754 46999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000755 1137 QDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLD 1216 (1300)
Q Consensus 1137 Q~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLD 1216 (1300)
|||.+|++|+|+|+.+..+.+|+++++++++++++++++++|+||||.++|+|.+||||||||++|||||+++|+|||||
T Consensus 422 Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlD 501 (592)
T PRK10790 422 QDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILD 501 (592)
T ss_pred cCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEe
Confidence 99999999999999988788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHhh
Q 000755 1217 EATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQ 1293 (1300)
Q Consensus 1217 EpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~~ 1293 (1300)
||||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|++++.|+|++|+++ ++.|+++++.+..
T Consensus 502 Epts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~~ 577 (592)
T PRK10790 502 EATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQLA 577 (592)
T ss_pred CCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHhh
Confidence 999999999999999999998889999999999999999999999999999999999999976 6899999987654
No 72
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.5e-61 Score=604.27 Aligned_cols=389 Identities=24% Similarity=0.344 Sum_probs=341.1
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 898 ARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLV 977 (1300)
Q Consensus 898 ~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 977 (1300)
.++..+......+...+++.|.++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 268 (582)
T PRK11176 189 FRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLY 268 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556677889999999999999999999999999999888888777776666666666666665544433333
Q ss_pred H-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEE
Q 000755 978 L-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVD 1056 (1300)
Q Consensus 978 ~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~ 1056 (1300)
+ ......|.+++|.+.+++++...+..++..+...+..++....+.+|+.++.+.+++.+. ... ...|..+.|+
T Consensus 269 ~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~~--~~~~~~~~i~ 343 (582)
T PRK11176 269 AASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDE---GKR--VIERAKGDIE 343 (582)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC---CCc--CCCCCCCeEE
Confidence 3 234556889999999999999999999999999999999999999999999887655321 111 1123456799
Q ss_pred EEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEc
Q 000755 1057 ILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIP 1136 (1300)
Q Consensus 1057 ~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vp 1136 (1300)
++||+|+|+++.+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+|
T Consensus 344 ~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~ 423 (582)
T PRK11176 344 FRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVS 423 (582)
T ss_pred EEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEc
Confidence 99999999876567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccHHHhcCCC--CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000755 1137 QDPTMFEGTVRNNLDPL--EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLV 1214 (1300)
Q Consensus 1137 Q~~~lf~gTvr~Nl~~~--~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLl 1214 (1300)
|||.+|++|+|+|+... +.++|++++++++.++++++++++|+||||.+||+|.+||||||||++|||||+++|+|||
T Consensus 424 Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ili 503 (582)
T PRK11176 424 QNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILI 503 (582)
T ss_pred cCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 99999999999999864 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHh
Q 000755 1215 LDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYT 1292 (1300)
Q Consensus 1215 LDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~ 1292 (1300)
||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++++++ ++.|++|++++.
T Consensus 504 lDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~ 580 (582)
T PRK11176 504 LDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQF 580 (582)
T ss_pred EECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHh
Confidence 99999999999999999999998788999999999999999999999999999999999999975 689999998653
No 73
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-63 Score=555.20 Aligned_cols=374 Identities=24% Similarity=0.393 Sum_probs=331.8
Q ss_pred HHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcccHHHHH
Q 000755 915 HFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFA-FSLVLLISIPKGVIEPAIAG 993 (1300)
Q Consensus 915 ~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~~~~~~~~g~~~~~~~g 993 (1300)
.-.+++-..+|+|-|++|+.-.++..+.++++++..++.......+...-+.+..+... .+++..+.+..+..+.|...
T Consensus 400 r~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfV 479 (790)
T KOG0056|consen 400 RQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFV 479 (790)
T ss_pred hhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeecccccccee
Confidence 34578889999999999999999999999999988877766655555444443333222 22333344457788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCccee
Q 000755 994 LAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPLVLR 1073 (1300)
Q Consensus 994 l~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~vL~ 1073 (1300)
+..+|.+++-++++|+...+..++++++-+|++.+.++.++|-. +....++---.+|.|+|+||+|.|+++. |||+
T Consensus 480 lf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVv---d~P~a~pl~~~~G~i~fsnvtF~Y~p~k-~vl~ 555 (790)
T KOG0056|consen 480 LFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVV---DLPGAPPLKVTQGKIEFSNVTFAYDPGK-PVLS 555 (790)
T ss_pred hHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhh---cCCCCCCccccCCeEEEEEeEEecCCCC-ceee
Confidence 99999999999999999999999999999999999987655432 2111121223579999999999999875 6999
Q ss_pred eeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCC
Q 000755 1074 GLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPL 1153 (1300)
Q Consensus 1074 ~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~ 1153 (1300)
||||+++||+.+|+|||+|+||||++++|+|+++.++|.|.|||+||+++..+.||+.||+||||.+||+.||..|+.+.
T Consensus 556 disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIrya 635 (790)
T KOG0056|consen 556 DISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYA 635 (790)
T ss_pred cceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHH
Q 000755 1154 -EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQ 1232 (1300)
Q Consensus 1154 -~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~ 1232 (1300)
...+|||+.+|.+.++++|.|.+.|+|++|.|||+|-.||||||||+++||++|++|.|++|||+||+||..|++.||.
T Consensus 636 k~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQa 715 (790)
T KOG0056|consen 636 KPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQA 715 (790)
T ss_pred CCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHh
Q 000755 1233 TLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYT 1292 (1300)
Q Consensus 1233 ~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~ 1292 (1300)
.+.+..+++|.|+||||++|+.++|.|+|+++|+|+|.|+|+||+.+++|.|++||+.+.
T Consensus 716 aL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 716 ALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQ 775 (790)
T ss_pred HHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999996544
No 74
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.8e-61 Score=617.17 Aligned_cols=391 Identities=25% Similarity=0.316 Sum_probs=335.5
Q ss_pred hhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 893 YYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTF 972 (1300)
Q Consensus 893 ~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 972 (1300)
.+.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......+......++..+..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (708)
T TIGR01193 314 LFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLILN 393 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666666677888999999999999999999999999998888777666655544444333333333322222
Q ss_pred HHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCC
Q 000755 973 AFSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPT 1051 (1300)
Q Consensus 973 ~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~ 1051 (1300)
.+++++ ...+..|.++.|.+..+.++...+..++..+...+.+++....+++|+.++++.++|.+.. ......++.
T Consensus 394 i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~~~~~~~ 470 (708)
T TIGR01193 394 VVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINK---KKRTELNNL 470 (708)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc---ccccCCCCC
Confidence 222222 2344588999999999999999999999999999999999999999999999887664321 111122345
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
.|.|+++||+|+|+++ +++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|++||+|+++++.+++|++
T Consensus 471 ~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 549 (708)
T TIGR01193 471 NGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQF 549 (708)
T ss_pred CCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHh
Confidence 6789999999999744 569999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCCCcccHHHhcCCC--CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1132 LSIIPQDPTMFEGTVRNNLDPL--EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1132 i~~vpQ~~~lf~gTvr~Nl~~~--~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
++||||||.+|+||||||+.+. .+.+|++++++++.+++++++.++|.||||.++|+|.+||||||||++||||++++
T Consensus 550 i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~ 629 (708)
T TIGR01193 550 INYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTD 629 (708)
T ss_pred eEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999875 46889999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHH
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVA 1289 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~ 1289 (1300)
|+|||||||||+||+++++.+++.|++. +++|+|+||||++++..||+|++|++|+++|.|+|++++++ ++.|++|++
T Consensus 630 p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 630 SKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDR-NGFYASLIH 707 (708)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhc-CCcHHHHhh
Confidence 9999999999999999999999999874 68999999999999999999999999999999999999975 688999875
No 75
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.6e-59 Score=581.03 Aligned_cols=512 Identities=18% Similarity=0.156 Sum_probs=378.0
Q ss_pred HHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 292 KALFF-SAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGI 370 (1300)
Q Consensus 292 ~~l~~-~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 370 (1300)
..+++ .+++.+++++++.++..++..+.|++++.+++....... ...+.+++ + .++..++.....+...+.+.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~--~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 82 (555)
T TIGR01194 9 LALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLGQ--GSLFSFGG-L---CLLALLFRIGADIFPAYAGM 82 (555)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--hHHHHHHH-H---HHHHHHHHHHHHHHHHHHHH
Confidence 33667 888899999999999999999999999988764211110 11111111 1 12223344445555677889
Q ss_pred HHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000755 371 KMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPWLVILQVSLALL-ILYKNLGLASIAALFA 449 (1300)
Q Consensus 371 ~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~-lL~~~lg~~~l~~l~~ 449 (1300)
++...++..+|+|.++++...++++++|++++++++|++.+++++..+.......+.++++++ +++..+.++.+ .+++
T Consensus 83 ~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li-~l~~ 161 (555)
T TIGR01194 83 HIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAI-TISA 161 (555)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHH
Confidence 999999999999999999999999999999999999999999976544444444444444433 33444444333 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 450 TVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEM--KFLSKIIELRKIEAGWLKKFLYTGAMTS 527 (1300)
Q Consensus 450 ~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~--~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 527 (1300)
+++.+++..+..++.++...+.++..++..+.+.|.++|++++|.++.++ ...+++.+..+...+...+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (555)
T TIGR01194 162 IIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAE 241 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444455566667777788888899999999999999999999854 3344443322211111111111111100
Q ss_pred HHHHHHHHHHHHHHHHHHHH---hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000755 528 FVFWGAPTFVSVATFGACML---LGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 528 ~~~~~~p~~v~~~~f~~~~~---~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 604 (1300)
...... ..+.++.+++ ..+.++.|.+++++.+...+..|+..+...+..+.++++|++||.++++.++.++..
T Consensus 242 ~~~~~~----~~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~ 317 (555)
T TIGR01194 242 NFGQLL----FFLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPE 317 (555)
T ss_pred HHHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 100111 1111111111 125789999999999999999999999999999999999999999998632211100
Q ss_pred ---ccCC-----CCCCCcceEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCcc
Q 000755 605 ---VEKH-----PRGSSETAIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISG 674 (1300)
Q Consensus 605 ---~~~~-----~~~~~~~~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 674 (1300)
.+.. +.......|+++|++|+|+... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G 397 (555)
T TIGR01194 318 LELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEG 397 (555)
T ss_pred ccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 0000 1111235799999999997431 24699999999999999999999999999999999999999999
Q ss_pred EEEEcCe-------------EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCC
Q 000755 675 TLKLCGT-------------KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGIN 741 (1300)
Q Consensus 675 ~i~~~g~-------------~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~ 741 (1300)
+|.++|. ++||+|+|++|++|+++|+ ....++++.+++++.++++++++.+|+|++|. .+
T Consensus 398 ~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~ 470 (555)
T TIGR01194 398 EILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TA 470 (555)
T ss_pred EEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----cc
Confidence 9999883 5899999999999999995 23457788899999999999999999999984 78
Q ss_pred CCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccccCCEEEEEeCCeEEE
Q 000755 742 LSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPAADLILVMKDGKITQ 820 (1300)
Q Consensus 742 LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~ 820 (1300)
|||||||||+||||++++|+|+|||||||+||+++++.+.+.++... .+++|+|+||||++.+..||+|++|++|++++
T Consensus 471 LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~ 550 (555)
T TIGR01194 471 LSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVK 550 (555)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999987655433 46899999999999999999999999999986
Q ss_pred e
Q 000755 821 A 821 (1300)
Q Consensus 821 ~ 821 (1300)
.
T Consensus 551 ~ 551 (555)
T TIGR01194 551 D 551 (555)
T ss_pred e
Confidence 3
No 76
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.5e-59 Score=537.53 Aligned_cols=529 Identities=21% Similarity=0.279 Sum_probs=430.4
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 288 FKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQV 367 (1300)
Q Consensus 288 ~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 367 (1300)
.....+.+-.+++.++..++++.+-.+..+.+|+.+-++-|.+-...+.. ....+.++.+...+++.+++....+...|
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~-TLv~Ltvlal~ly~~~glLd~iR~~~l~R 89 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVP-TLVMLTVLALGLYAFQGLLDAIRSRVLVR 89 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677778888888899999999999999999888888775543322 22334444455566677888888888999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH------HhhHHHHHHHHHHHHHHHHHHHHHH
Q 000755 368 AGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW------YMHDPWLVILQVSLALLILYKNLGL 441 (1300)
Q Consensus 368 ~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~------~~~~~~~~~l~i~~~l~lL~~~lg~ 441 (1300)
+|.++...|...||.-+.+.+..........+.++ |.+.+..|.. .|..+|. |+-+ ..++++.-.+|+
T Consensus 90 ig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~Lr----DL~qvR~Fltg~g~~A~fDaPW~-P~yl-~v~fl~Hp~lG~ 163 (580)
T COG4618 90 IGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPLR----DLDQVRQFLTGTGLTAFFDAPWM-PLYL-AVIFLFHPWLGL 163 (580)
T ss_pred HHHHHHHHhccHHHHHHHhhHHhhcCCCccccchh----hHHHHHHHHcCCCcchhcCCchH-HHHH-HHHHHHHHHHHH
Confidence 99999999999999999765554443333444444 9999998853 3444554 5433 334556667898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 442 ASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLY 521 (1300)
Q Consensus 442 ~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~ 521 (1300)
.++++.++++.+..+|-.++++ -.++-.+..-++.....-.++|.++|+.+|+.....++|.+.....+++......
T Consensus 164 ~a~~ga~iLv~la~ln~~~t~~---p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd 240 (580)
T COG4618 164 IALAGAIILVVLALLNERATRK---PLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASD 240 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHH
Confidence 8888887777777777665543 3445566677888999999999999999999999999998877776666655444
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000755 522 TGAMTSFVFWGAPTF--VSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDD 599 (1300)
Q Consensus 522 ~~~~~~~~~~~~p~~--v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e 599 (1300)
.........-..-.+ ..++..|+|+++.+++|+|.+++...+..-...|+......|.++..++.|++|++++|....
T Consensus 241 ~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p 320 (580)
T COG4618 241 RNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELP 320 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 333333222222222 334566788889999999999999988888889999999999999999999999999997543
Q ss_pred CCcccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEc
Q 000755 600 LQSDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 679 (1300)
Q Consensus 600 ~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~ 679 (1300)
... +..+.+..+..+.++++++.- ++.++|+++|+||++.+||-++||||||||||||.++|.|..+|.+|.|++|
T Consensus 321 ~~~---~~m~LP~P~g~L~Ve~l~~~P-Pg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLD 396 (580)
T COG4618 321 AAA---ERMPLPAPQGALSVERLTAAP-PGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLD 396 (580)
T ss_pred ccc---CCCCCCCCCceeeEeeeeecC-CCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEec
Confidence 322 223344456789999999965 4667899999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEecCCcCCCCCHHHHHh-cCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHH
Q 000755 680 G-------------TKAYVAQSPWIQSGNIEDNIL-FGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGG 745 (1300)
Q Consensus 680 g-------------~~ayv~Q~~~l~~~Ti~eNI~-fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGG 745 (1300)
| .+||.||+..+|.|||+|||. |+.+.|++++-++.+.++.++-+-.+|+|++|.|||.|..||||
T Consensus 397 ga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgG 476 (580)
T COG4618 397 GADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGG 476 (580)
T ss_pred chhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCch
Confidence 8 479999999999999999996 77789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChH
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||||+||||+|.||.+++||||-|+||.+.++.+.+.+..-..+|.|+|+||||++.+..+|+|++|++|++...|+-+
T Consensus 477 QRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~ 556 (580)
T COG4618 477 QRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPRE 556 (580)
T ss_pred HHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHH
Confidence 99999999999999999999999999999999999765555556799999999999999999999999999999999999
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
|.+++
T Consensus 557 eVLa~ 561 (580)
T COG4618 557 EVLAK 561 (580)
T ss_pred HHHHH
Confidence 98753
No 77
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=9.7e-61 Score=610.86 Aligned_cols=383 Identities=25% Similarity=0.337 Sum_probs=332.3
Q ss_pred hhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 894 YIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFA 973 (1300)
Q Consensus 894 y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 973 (1300)
+.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..........+......++..+...
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (694)
T TIGR03375 305 LQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSV 384 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555566778899999999999999999999999999998888877766665555555444444444333222
Q ss_pred HHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCC
Q 000755 974 FSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTH 1052 (1300)
Q Consensus 974 ~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~ 1052 (1300)
+.+++ ...+..|.++.|.+..+++|...+..++..+...+.+++....+.+|+.++++.++|.+.. .......+..
T Consensus 385 ~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~---~~~~~~~~~~ 461 (694)
T TIGR03375 385 AIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG---TRFLHRPRLQ 461 (694)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCCCCCcc
Confidence 22222 2334578899999999999999999999999999999999999999999999887664311 1111112345
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
+.|+++||+|+|++..+++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|+++
T Consensus 462 ~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i 541 (694)
T TIGR03375 462 GEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNI 541 (694)
T ss_pred ceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhcc
Confidence 78999999999976556799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1133 SIIPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1133 ~~vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
+||||||.+|+|||+||+.+.. +.++++++++++.+++++++.++|.|+||.++|+|.+||||||||++||||++++|+
T Consensus 542 ~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~ 621 (694)
T TIGR03375 542 GYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPP 621 (694)
T ss_pred EEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999998765 489999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1212 VLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||||||||+||+++++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++
T Consensus 622 iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 622 ILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999999999999999999998889999999999999999999999999999999999999864
No 78
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.9e-60 Score=593.08 Aligned_cols=392 Identities=24% Similarity=0.321 Sum_probs=330.6
Q ss_pred hhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 893 YYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTF 972 (1300)
Q Consensus 893 ~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 972 (1300)
++.+..+...+......+.+.+.+.|.++|+.+||+|+.++++.+++.+..+++.+..........+.....+++..+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (574)
T PRK11160 180 LFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQALMILANGLTV 259 (574)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666777888999999999999999999999999999988888777766666555555555555554443
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCC
Q 000755 973 AFSLVLLISIPKGVIEPAIAGLAVTYGLN-LNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPT 1051 (1300)
Q Consensus 973 ~~~~~~~~~~~~g~~~~~~~gl~l~~~~~-~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~ 1051 (1300)
.+.+++......|.++.|....++.|... ...++..+...+..++....|.+|+.++++.+++.+.. + ..+ ..+.
T Consensus 260 ~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~-~-~~~--~~~~ 335 (574)
T PRK11160 260 VLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFP-T-TST--AAAD 335 (574)
T ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-c-ccC--CCCC
Confidence 33333322223567777776666666433 34456666777888889999999999999876553211 0 111 1134
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
.+.|+++||+++|+++.+++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||+|+++++.+++|++
T Consensus 336 ~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~ 415 (574)
T PRK11160 336 QVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQA 415 (574)
T ss_pred CCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhh
Confidence 57899999999997654579999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1132 LSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1132 i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
++|+||||.+|++|++||+... .+.+|++++++++.+++++++.+ |+||||.+||+|.+||||||||++||||++++|
T Consensus 416 i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~ 494 (574)
T PRK11160 416 ISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDA 494 (574)
T ss_pred eeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999865 46799999999999999999999 999999999999999999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHH
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAE 1290 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~ 1290 (1300)
+|||||||||+||+++++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|++.
T Consensus 495 ~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 495 PLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc-CcHHHHHHhh
Confidence 999999999999999999999999998889999999999999999999999999999999999999975 7899998863
No 79
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=8.2e-61 Score=593.68 Aligned_cols=422 Identities=25% Similarity=0.346 Sum_probs=314.0
Q ss_pred eEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEE-----------EcCe--------
Q 000755 621 DGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLK-----------LCGT-------- 681 (1300)
Q Consensus 621 ~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~-----------~~g~-------- 681 (1300)
+++.+|.. ...+|++++ .+++|++++|+||||||||||+++|+|+++|++|+|. ++|+
T Consensus 78 ~~~~~yg~--~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~ 154 (590)
T PRK13409 78 EPVHRYGV--NGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKK 154 (590)
T ss_pred CceEEecC--CceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHH
Confidence 47888862 246899999 8999999999999999999999999999999999996 5541
Q ss_pred -------E----EEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 -------K----AYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 -------~----ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
+ .|++|.|.++.+|++||+.+.. ..++.+++++..++... ......+||||||||+
T Consensus 155 ~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~~--~~~~~~~~l~~l~l~~~-----------~~~~~~~LSgGe~qrv 221 (590)
T PRK13409 155 LYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKVD--ERGKLDEVVERLGLENI-----------LDRDISELSGGELQRV 221 (590)
T ss_pred HhccCcceeecccchhhhhhhhcchHHHHHHhhh--HHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHH
Confidence 2 3555677788899999997531 23456666666665432 2445568999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
+||||++++|++|+||||||+||++....+++ .+..+.+++|+|+|||+++.+.. ||+|++|+++. |.|..+..
T Consensus 222 ~ia~al~~~p~lllLDEPts~LD~~~~~~l~~-~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----g~~g~~~~ 296 (590)
T PRK13409 222 AIAAALLRDADFYFFDEPTSYLDIRQRLNVAR-LIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----GAYGVVSK 296 (590)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc----cccceecc
Confidence 99999999999999999999999999998875 45554448999999999999876 99999997641 11110000
Q ss_pred cCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhhh
Q 000755 830 SGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVCK 909 (1300)
Q Consensus 830 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~ 909 (1300)
.. . .++
T Consensus 297 ~~-----------~------------------------------------------------------~~~--------- 302 (590)
T PRK13409 297 PK-----------G------------------------------------------------------VRV--------- 302 (590)
T ss_pred hh-----------H------------------------------------------------------HHH---------
Confidence 00 0 000
Q ss_pred hhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccH
Q 000755 910 APVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEP 989 (1300)
Q Consensus 910 sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~ 989 (1300)
...+.+.| +. ..
T Consensus 303 -----~i~~~~~~------~~----------------------------------------------------~~----- 314 (590)
T PRK13409 303 -----GINEYLKG------YL----------------------------------------------------PE----- 314 (590)
T ss_pred -----hHHHHHHh------cc----------------------------------------------------hh-----
Confidence 00000000 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCC
Q 000755 990 AIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLP 1069 (1300)
Q Consensus 990 ~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~ 1069 (1300)
++ .|+.+ ++. ..+...++..-+....++++|++++|++.
T Consensus 315 ---------------------------e~-----~~~~~------~~~-~~~~~~~~~~~~~~~~l~~~~ls~~~~~~-- 353 (590)
T PRK13409 315 ---------------------------EN-----MRIRP------EPI-EFEERPPRDESERETLVEYPDLTKKLGDF-- 353 (590)
T ss_pred ---------------------------hh-----hhccc------cCc-ceecCCCccccCCceEEEEcceEEEECCE--
Confidence 00 00000 000 00000000000122359999999999652
Q ss_pred cceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCC-cccHHH
Q 000755 1070 LVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMF-EGTVRN 1148 (1300)
Q Consensus 1070 ~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf-~gTvr~ 1148 (1300)
.|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++ .+++|+||++.++ +.||++
T Consensus 354 -~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~y~~Q~~~~~~~~tv~e 419 (590)
T PRK13409 354 -SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKISYKPQYIKPDYDGTVED 419 (590)
T ss_pred -EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEEEecccccCCCCCcHHH
Confidence 5999999999999999999999999999999999999999999986 1599999998754 569999
Q ss_pred hcCCC-CCC-CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHH
Q 000755 1149 NLDPL-EEY-KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTAT 1226 (1300)
Q Consensus 1149 Nl~~~-~~~-~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t 1226 (1300)
|+... ... .+..+.++++.+++.+...+ ...+||||||||++|||||+++|++|||||||++||+.+
T Consensus 420 ~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~-----------~~~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 420 LLRSITDDLGSSYYKSEIIKPLQLERLLDK-----------NVKDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHHHhhhcChHHHHHHHHHHCCCHHHHhC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 98642 122 23346678888888654333 335689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecC
Q 000755 1227 DNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDS 1272 (1300)
Q Consensus 1227 ~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~ 1272 (1300)
...+.+.|++..+ ++|||+|||+++.+.. ||||++|++ ++...|+
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 9999999998643 6899999999999987 999999965 7777665
No 80
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.1e-57 Score=616.88 Aligned_cols=474 Identities=20% Similarity=0.194 Sum_probs=360.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 364 RLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLA 442 (1300)
Q Consensus 364 ~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~~ 442 (1300)
...+.+.+.-..+...+|++.++.+...+++.++|+|+|+++.|++.+.+... .+..+....+.+++.+++++...++.
T Consensus 948 ~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l 1027 (1490)
T TIGR01271 948 PLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYI 1027 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888899999999999999999999999999999999998654 34444445555555554444333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 443 SIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYT 522 (1300)
Q Consensus 443 ~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~ 522 (1300)
+++.+.++++++.+..++.+..+..++.....+....+.+.|.++|+.+||.|++|+.|.++..+.-+...+........
T Consensus 1028 ~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1107 (1490)
T TIGR01271 1028 FIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLST 1107 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23222222333333334444445555556667778889999999999999999999999988866543221111111000
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000755 523 GAMTSF-VFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQ 601 (1300)
Q Consensus 523 ~~~~~~-~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~ 601 (1300)
..+..+ .......++..+.+ ..+.....++|.+-.++++...+..++..+...+..+..+.+|++||.+|++.++..
T Consensus 1108 ~~wl~~~~~~i~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~ 1185 (1490)
T TIGR01271 1108 LRWFQMRIDIIFVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEE 1185 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 001000 00001011111111 111112345566666666666777888888889999999999999999999765432
Q ss_pred ccccc---------------CCCC--CCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHH
Q 000755 602 SDVVE---------------KHPR--GSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSC 664 (1300)
Q Consensus 602 ~~~~~---------------~~~~--~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ 664 (1300)
....+ ..++ -+..+.|+|+|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++
T Consensus 1186 ~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~l 1264 (1490)
T TIGR01271 1186 PRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSA 1264 (1490)
T ss_pred ccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 21100 0000 1234579999999999753 4689999999999999999999999999999999
Q ss_pred HhccccCCccEEEEcC-------------eEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCC
Q 000755 665 ILGEVPKISGTLKLCG-------------TKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGD 731 (1300)
Q Consensus 665 llG~~~~~~G~i~~~g-------------~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd 731 (1300)
|+|+++ .+|+|.++| .++||||+|.+|+|||||||....++++++.+++++.|++.+.++.+|+|+
T Consensus 1265 L~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GL 1343 (1490)
T TIGR01271 1265 LLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKL 1343 (1490)
T ss_pred HhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCcccc
Confidence 999997 799999998 369999999999999999998777789999999999999999999999999
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEE
Q 000755 732 QTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLIL 811 (1300)
Q Consensus 732 ~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~ 811 (1300)
+|.|||+|.||||||||||+|||||+++|+|+|||||||+||++|++.|. +.++...+++|+|+||||++.+..||+|+
T Consensus 1344 dt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~-~~L~~~~~~~TvI~IaHRl~ti~~~DrIl 1422 (1490)
T TIGR01271 1344 DFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIR-KTLKQSFSNCTVILSEHRVEALLECQQFL 1422 (1490)
T ss_pred ccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999988885 56677778999999999999999999999
Q ss_pred EEeCCeEEEecChHHHHhcCchHHHHHHHHH
Q 000755 812 VMKDGKITQAGKYNDILNSGTDFMVLVGAHQ 842 (1300)
Q Consensus 812 ~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~ 842 (1300)
+|++|+|++.|+|++|++.++.|..++....
T Consensus 1423 vL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1423 VIEGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred EEECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 9999999999999999988888888876544
No 81
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.7e-59 Score=584.92 Aligned_cols=394 Identities=25% Similarity=0.334 Sum_probs=345.2
Q ss_pred hhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000755 892 QYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLT 971 (1300)
Q Consensus 892 ~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~ 971 (1300)
.++.+..++..+......+...+.+.|.++|+.+||+++.++++.+++.+..+...+..........+.....+++..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (571)
T TIGR02203 172 RRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLA 251 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555556666667788999999999999999999999999999999888887777766666666666555555443
Q ss_pred HHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCC
Q 000755 972 FAFSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWP 1050 (1300)
Q Consensus 972 ~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp 1050 (1300)
..+.+++ ...+..|.+++|.+..+.+|...+..++..+...+..+.....+.+|+.++.+.+++.+.. ..+.. +
T Consensus 252 ~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~--~ 326 (571)
T TIGR02203 252 LAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE--R 326 (571)
T ss_pred HHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC--C
Confidence 3333333 2345678899999999999999999999999999999999999999999999866553311 11111 2
Q ss_pred CCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhc
Q 000755 1051 THGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRS 1130 (1300)
Q Consensus 1051 ~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~ 1130 (1300)
..+.|+++||+++|++..+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|+
T Consensus 327 ~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~ 406 (571)
T TIGR02203 327 ARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRR 406 (571)
T ss_pred CCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHh
Confidence 35689999999999765567999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEcCCCCCCcccHHHhcCCCC--CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1131 RLSIIPQDPTMFEGTVRNNLDPLE--EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~gTvr~Nl~~~~--~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
+++|+||+|.+|+||+|+|+.... +.+|++++++++.+++++++.++|+||||.++|+|.+||||||||++||||+++
T Consensus 407 ~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~ 486 (571)
T TIGR02203 407 QVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLK 486 (571)
T ss_pred hceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999999998763 689999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHH
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~ 1288 (1300)
+|+|++||||||+||.++++.|.+.|++..+++|+|+||||++.+..||+|++|++|++++.|++++++++ ++.|++++
T Consensus 487 ~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~ 565 (571)
T TIGR02203 487 DAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLH 565 (571)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHH
Confidence 99999999999999999999999999998889999999999999989999999999999999999999975 67999988
Q ss_pred HHH
Q 000755 1289 AEY 1291 (1300)
Q Consensus 1289 ~~~ 1291 (1300)
.++
T Consensus 566 ~~~ 568 (571)
T TIGR02203 566 NMQ 568 (571)
T ss_pred HHh
Confidence 765
No 82
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-59 Score=550.79 Aligned_cols=444 Identities=24% Similarity=0.333 Sum_probs=334.5
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 681 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 681 (1300)
..++++|++.+|+ ..++|+|+||++.+||++|++|+||+|||||+|.|.|.|+|++|+|.++|+
T Consensus 7 ~ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 7 PLLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ceeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 3588999999997 468999999999999999999999999999999999999999999999985
Q ss_pred -EEEEecCCcCC-CCCHHHHHhcCCCC-------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 -KAYVAQSPWIQ-SGNIEDNILFGKPM-------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 -~ayv~Q~~~l~-~~Ti~eNI~fg~~~-------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
|+.|+|+.-+. +-||.|||.+|++. |..+.++..+. -++.+... -.......+||+||||-|+|
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~-----~l~~lg~~--~~~~~~v~~LsiaqrQ~VeI 156 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARE-----LLARLGLD--IDPDTLVGDLSIAQRQMVEI 156 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHH-----HHHHcCCC--CChhhhhhhCCHHHHHHHHH
Confidence 58999999875 67999999999763 33333222211 12222111 11345566899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecCh-HHHHhc
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY-NDILNS 830 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~-~~l~~~ 830 (1300)
|||++.+++|+|||||||+|+.+..+++|+-+..-..+|.++|+|||+++.+.. ||+|.||+||+.+..++. .++-.
T Consensus 157 ArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~- 235 (500)
T COG1129 157 ARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE- 235 (500)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH-
Confidence 999999999999999999999999999997543334579999999999998765 999999999999876542 21100
Q ss_pred CchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhhhh
Q 000755 831 GTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVCKA 910 (1300)
Q Consensus 831 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~s 910 (1300)
.+++
T Consensus 236 ----~~lv------------------------------------------------------------------------ 239 (500)
T COG1129 236 ----DELV------------------------------------------------------------------------ 239 (500)
T ss_pred ----HHHH------------------------------------------------------------------------
Confidence 0000
Q ss_pred hHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHH
Q 000755 911 PVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPA 990 (1300)
Q Consensus 911 p~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 990 (1300)
+ ...|
T Consensus 240 ----------------~------------------------------------------------------~MvG----- 244 (500)
T COG1129 240 ----------------R------------------------------------------------------LMVG----- 244 (500)
T ss_pred ----------------H------------------------------------------------------HhhC-----
Confidence 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCCCc
Q 000755 991 IAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHLPL 1070 (1300)
Q Consensus 991 ~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~~~ 1070 (1300)
| +..+..+++ +..-+....++++|++..-
T Consensus 245 ----------------------------------r--~~~~~~~~~---------~~~~~~~~~l~v~~l~~~~------ 273 (500)
T COG1129 245 ----------------------------------R--ELEDLFPEP---------PEEGIGEPVLEVRNLSGGG------ 273 (500)
T ss_pred ----------------------------------c--chhhhcccc---------cccCCCCcEEEEecCCCCC------
Confidence 0 000000000 0000122357788877532
Q ss_pred ceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH-HHhcccEEEcCCCC---CC-ccc
Q 000755 1071 VLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH-DLRSRLSIIPQDPT---MF-EGT 1145 (1300)
Q Consensus 1071 vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~-~lr~~i~~vpQ~~~---lf-~gT 1145 (1300)
.++|+||++++||++||.|--|||+|-|+++|+|..++.+|+|.+||+++.--+++ ..+..|+|||.|.. +| ..+
T Consensus 274 ~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~s 353 (500)
T COG1129 274 KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMS 353 (500)
T ss_pred ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCc
Confidence 58999999999999999999999999999999999999999999999998777655 57788999999873 44 459
Q ss_pred HHHhcCCC--CCCCHH-HHHHHHHHcCCcHHHHhh---cCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 000755 1146 VRNNLDPL--EEYKDE-EIWEALDKCQLGDEVRNK---EGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEAT 1219 (1300)
Q Consensus 1146 vr~Nl~~~--~~~~d~-~i~~~l~~~~l~~~i~~~---~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpT 1219 (1300)
|++|+... ..++.. -+...-++.-..++++++ ....+. ...+||||++||++|||+|..+|+||||||||
T Consensus 354 I~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~----~v~~LSGGNQQKVvlarwL~~~p~vLilDEPT 429 (500)
T COG1129 354 IAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQ----PIGTLSGGNQQKVVLARWLATDPKVLILDEPT 429 (500)
T ss_pred HHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccc----hhhcCCchhhhhHHHHHHHhcCCCEEEECCCC
Confidence 99998532 111000 011111111112222222 223333 34689999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1220 ASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1220 s~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
.|+|..+.+.|.+.|++.. +|.+||+||.+++++.. ||||+||++|+++..-+.++
T Consensus 430 RGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 430 RGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred cCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEecccc
Confidence 9999999999999999976 57999999999999986 99999999999997544444
No 83
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.5e-59 Score=594.38 Aligned_cols=388 Identities=25% Similarity=0.350 Sum_probs=340.3
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVL 978 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 978 (1300)
+...+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..........+.....+++..+...+.+++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~ 382 (694)
T TIGR01846 303 RKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWF 382 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 33444444566778899999999999999999999999999998888877777666666666665555554443333333
Q ss_pred -HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEE
Q 000755 979 -LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDI 1057 (1300)
Q Consensus 979 -~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~ 1057 (1300)
...+..|.++.|.+.++.++...+..++..+...+.+++....+.+|+.++++.++|.... ...+. ....+.|++
T Consensus 383 g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~--~~~~~--~~~~~~i~~ 458 (694)
T TIGR01846 383 GAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA--GLAAL--PELRGAITF 458 (694)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC--CCCCC--CCCCCeEEE
Confidence 2344578899999999999999999999999999999999999999999999877664311 11111 123578999
Q ss_pred EeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcC
Q 000755 1058 LNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQ 1137 (1300)
Q Consensus 1058 ~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ 1137 (1300)
+||+|+|+++.+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||+|+++++.+++|++++||||
T Consensus 459 ~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q 538 (694)
T TIGR01846 459 ENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQ 538 (694)
T ss_pred EEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEcc
Confidence 99999998665679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000755 1138 DPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLD 1216 (1300)
Q Consensus 1138 ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLD 1216 (1300)
||.+|++|++||+... .+.++++++++++.+++++++.++|.||||.++++|.+||||||||++||||++++|+|||||
T Consensus 539 ~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililD 618 (694)
T TIGR01846 539 ENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFD 618 (694)
T ss_pred CCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 9999999999999875 468899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHH
Q 000755 1217 EATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1217 EpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~ 1291 (1300)
||||+||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.|+|++++++ ++.|++|++++
T Consensus 619 Epts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 619 EATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred CCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc-CChHHHHHHhh
Confidence 999999999999999999998888999999999999999999999999999999999999975 68999998764
No 84
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-59 Score=542.26 Aligned_cols=375 Identities=26% Similarity=0.413 Sum_probs=313.2
Q ss_pred hhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCccc
Q 000755 910 APVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLL-ISIPKGVIE 988 (1300)
Q Consensus 910 sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~-~~~~~g~~~ 988 (1300)
.......-|++...++||+|+.|++-.++....+.++-+......+....+.+--..+.+...++..++. --+..|.++
T Consensus 211 n~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mt 290 (591)
T KOG0057|consen 211 NSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMT 290 (591)
T ss_pred hHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Confidence 3445667889999999999999999999888888877776666555555444444444333333222221 123455677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCC
Q 000755 989 PAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHL 1068 (1300)
Q Consensus 989 ~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~ 1068 (1300)
.+...+..+...++..++..+-..++++-..+.-.+-.....+.... +.+. +.+.-...+.|+|+||++.|+++
T Consensus 291 vgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~----i~~~-~~~i~~~~~~I~F~dV~f~y~~k- 364 (591)
T KOG0057|consen 291 VGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDED----IQEA-ALPIELFGGSIEFDDVHFSYGPK- 364 (591)
T ss_pred ccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhh----hhhc-cCCcccCCCcEEEEeeEEEeCCC-
Confidence 77777888888888888888888888877776665555443221111 1111 11112345779999999999986
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHH
Q 000755 1069 PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRN 1148 (1300)
Q Consensus 1069 ~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~ 1148 (1300)
+++|+|+||+|++||||||||+|||||||++++|+|+++ .+|+|+|||+|+.+++++.+|+-|||||||..||++||.+
T Consensus 365 ~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~ 443 (591)
T KOG0057|consen 365 RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILY 443 (591)
T ss_pred CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHH
Confidence 459999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHH
Q 000755 1149 NLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATD 1227 (1300)
Q Consensus 1149 Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~ 1227 (1300)
|+.+.+ ..+++|+.+++++.+++|.+.++|+|++|.|||+|..||||||||++||||++++|+|+++|||||+||.+||
T Consensus 444 NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE 523 (591)
T KOG0057|consen 444 NIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETE 523 (591)
T ss_pred HhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhH
Confidence 998764 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHh
Q 000755 1228 NLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYT 1292 (1300)
Q Consensus 1228 ~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~ 1292 (1300)
+.|.+.|.....++|+|+|+||++++++||+|+++++|++.|+|+|+||+. +++.|+++|....
T Consensus 524 ~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 524 REILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQT 587 (591)
T ss_pred HHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcccc
Confidence 999999999888999999999999999999999999999999999999998 7888888876543
No 85
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.7e-58 Score=578.12 Aligned_cols=397 Identities=23% Similarity=0.314 Sum_probs=337.5
Q ss_pred hhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Q 000755 891 EQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSL 970 (1300)
Q Consensus 891 ~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 970 (1300)
..++.+..++..+......+...+++.|.++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (588)
T PRK13657 173 TTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTI 252 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666666778899999999999999999999999998888888777666555444444444444433333
Q ss_pred HHHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCC
Q 000755 971 TFAFSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSW 1049 (1300)
Q Consensus 971 ~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~w 1049 (1300)
...+++++ ...+..|.+++|.+..++.|...+..++..+...+..+.....+.+|+.++.+.+++.+.. ... ++. -
T Consensus 253 ~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~~~-~~~-~ 329 (588)
T PRK13657 253 TMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP-PGA-IDL-G 329 (588)
T ss_pred HHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-CCC-CCc-C
Confidence 32222222 3345678999999999999999999999999999999999999999999987754432211 111 110 0
Q ss_pred CCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHh
Q 000755 1050 PTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1050 p~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr 1129 (1300)
+..+.|+++||+|+|+++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|
T Consensus 330 ~~~~~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r 408 (588)
T PRK13657 330 RVKGAVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLR 408 (588)
T ss_pred CCCCeEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHH
Confidence 234679999999999754 4699999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1130 SRLSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
++|+|+||||.+|+||+|||+... ++.+|++++++++.+++++++.++|+|+||.++++|.+||||||||++||||+++
T Consensus 409 ~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~ 488 (588)
T PRK13657 409 RNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLK 488 (588)
T ss_pred hheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999876 4678999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHH
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~ 1288 (1300)
+|+|||||||||+||+++++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++++++ ++.|++++
T Consensus 489 ~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~ 567 (588)
T PRK13657 489 DPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALL 567 (588)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHH
Confidence 99999999999999999999999999988788999999999999999999999999999999999999975 68999999
Q ss_pred HHHh
Q 000755 1289 AEYT 1292 (1300)
Q Consensus 1289 ~~~~ 1292 (1300)
.+..
T Consensus 568 ~~~~ 571 (588)
T PRK13657 568 RAQG 571 (588)
T ss_pred HHhh
Confidence 8654
No 86
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=6.1e-58 Score=574.40 Aligned_cols=395 Identities=24% Similarity=0.338 Sum_probs=338.0
Q ss_pred hhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 894 YIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFA 973 (1300)
Q Consensus 894 y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 973 (1300)
+.+..+...+..........+++.|.++|+.+||+|+.++.+.+++.+..+...+..........|+......+..+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (576)
T TIGR02204 178 FGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIV 257 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555566666778889999999999999999999999999988888877666555555555555444443333222
Q ss_pred HHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCC
Q 000755 974 FSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTH 1052 (1300)
Q Consensus 974 ~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~ 1052 (1300)
+.+++ ...+..|.++.|.+..+..|...+..++..+...+.++.+...+.+|+.++.+.++|.+.. .......+|..
T Consensus 258 ~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~--~~~~~~~~~~~ 335 (576)
T TIGR02204 258 GVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP--AHPKTLPVPLR 335 (576)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC--CCCccCCcCCC
Confidence 22222 2334578899999999999999999999999999999999999999999998866542211 11111123445
Q ss_pred ceEEEEeeeeeeCCCC-CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1053 GEVDILNLQVRYAPHL-PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~-~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
+.|+++||+++|+++. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++
T Consensus 336 ~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~ 415 (576)
T TIGR02204 336 GEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRAR 415 (576)
T ss_pred ceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHh
Confidence 6899999999997532 579999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1132 LSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1132 i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
++|+||||.+|++|+|||+.+. ++.+|++++++++++++.++++++|+|+||.++|+|.+||||||||++||||++++|
T Consensus 416 i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~ 495 (576)
T TIGR02204 416 MALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDA 495 (576)
T ss_pred ceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999875 357899999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHH
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAE 1290 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~ 1290 (1300)
+|||||||||+||+++++.+.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|+++++ +++.|++|++.
T Consensus 496 ~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~-~~~~~~~l~~~ 574 (576)
T TIGR02204 496 PILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA-KGGLYARLARL 574 (576)
T ss_pred CeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH-cCChHHHHHhh
Confidence 99999999999999999999999999888999999999999999999999999999999999999987 47899998865
Q ss_pred H
Q 000755 1291 Y 1291 (1300)
Q Consensus 1291 ~ 1291 (1300)
+
T Consensus 575 ~ 575 (576)
T TIGR02204 575 Q 575 (576)
T ss_pred c
Confidence 4
No 87
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4.4e-56 Score=553.06 Aligned_cols=508 Identities=16% Similarity=0.160 Sum_probs=361.7
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 290 LTKALFFSAWKEIVFTAILALLYTLANYVG-PYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVA 368 (1300)
Q Consensus 290 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~-P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 368 (1300)
+++.+++.+++.++...++.++..++.++. |++.+.++|.+... ....+.+++.+++.. +......+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 75 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS---LLVLPEFLGLLLLLM----AVTLGSQLALTTL 75 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---chHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 567778888888888888989888888774 77888888865321 111111111111111 2223344556677
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 369 GIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPWLVILQVSLALLILYKNLGLASIAALF 448 (1300)
Q Consensus 369 g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~ 448 (1300)
+.++...++..+|+|.++++...++++++|+++|++++|++.+..++..+..++...+.+++++++++..-+..+++.++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 78888889999999999999999999999999999999999998865555566666666666655554333333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 449 ATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQG--WEMKFLSKIIELRKIEAGWLKKFLYTGAMT 526 (1300)
Q Consensus 449 ~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~--~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 526 (1300)
++++.+++...+.++.++..++.++..+++.+.+.|.++|++++++.. .++.+.+++.+..+.-.+...+........
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSA 235 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 455555566667777888888889999999999999999999997432 223444444432221111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000755 527 SFVFWGAPTFVSVATFGACMLLGIP---LESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSD 603 (1300)
Q Consensus 527 ~~~~~~~p~~v~~~~f~~~~~~~~~---Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 603 (1300)
.. +. .++..+.++.+++.++. .+.+.+..+..+...+..|+..+...+..+.+++.+++|+.+++..++.++.
T Consensus 236 ~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~ 311 (547)
T PRK10522 236 VN--WS--NIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF 311 (547)
T ss_pred HH--HH--HHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 11 10 11111122222222211 2222222222233346689999999999999999999999999765432211
Q ss_pred cccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--
Q 000755 604 VVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-- 681 (1300)
Q Consensus 604 ~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-- 681 (1300)
. ...+. .....++++|++|+|+. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 312 ~-~~~~~-~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~ 387 (547)
T PRK10522 312 P-RPQAF-PDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPV 387 (547)
T ss_pred c-ccccc-CcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEC
Confidence 1 11111 11246999999999973 357999999999999999999999999999999999999999999999873
Q ss_pred -----------EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 -----------KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 -----------~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
++||+|+|++|++|++|| +...++++.+++++.+++..+++. ++|. .+|.+||||||||+
T Consensus 388 ~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qRl 458 (547)
T PRK10522 388 TAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKKRL 458 (547)
T ss_pred CCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHHHH
Confidence 699999999999999999 455677788888888877766642 3221 24899999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCccccCCEEEEEeCCeEEEe
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPAADLILVMKDGKITQA 821 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~ 821 (1300)
+||||++++|+++|||||||+||+++++.+.+.+..... +++|+|+||||++.+..||+|++|++|++++.
T Consensus 459 ~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 459 ALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999988765433222 48999999999999999999999999999976
No 88
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-59 Score=524.52 Aligned_cols=384 Identities=25% Similarity=0.419 Sum_probs=343.8
Q ss_pred HHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000755 901 LSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVL-L 979 (1300)
Q Consensus 901 l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~ 979 (1300)
.+|.-..+-+...+.-.+++-..+|+|.|+.|+.+..++.+..+.+.++.........|+++--..+........... .
T Consensus 110 ~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~ 189 (497)
T COG5265 110 FRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTAIFSTGLRVMMTMSA 189 (497)
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhcH
Confidence 344444455666677788999999999999999999999999999999998888888888876665554433332222 2
Q ss_pred HHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCC-CCceEEEE
Q 000755 980 ISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWP-THGEVDIL 1058 (1300)
Q Consensus 980 ~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp-~~g~i~~~ 1058 (1300)
..+..|.++.|...+.-.|..+++.+++.+...+.++.+.....|++.+..+.+.|.. +....++-|| ..|.+.|+
T Consensus 190 ~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~---d~pda~~L~~~~~g~v~F~ 266 (497)
T COG5265 190 LGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVS---DAPDAPPLWPVRLGAVAFI 266 (497)
T ss_pred HHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhc---cCCCCccccccccceEEEE
Confidence 3456788999999999999999999999999999999999999999999988766543 2233445564 46889999
Q ss_pred eeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCC
Q 000755 1059 NLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQD 1138 (1300)
Q Consensus 1059 ~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~ 1138 (1300)
||+|.|.+.. ++|+|+||++++|+++||||++|+||||++++|+|+|++++|.|.+||+|+..+..+.+|+.||+||||
T Consensus 267 ~V~F~y~~~r-~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQD 345 (497)
T COG5265 267 NVSFAYDPRR-PILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQD 345 (497)
T ss_pred EEEeeccccc-hhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCccc
Confidence 9999998874 699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000755 1139 PTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1217 (1300)
Q Consensus 1139 ~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDE 1217 (1300)
..||+.|+..|+.+. ...+++|++.+++.++++++++.+|+|+||.|||.|-.||||||||+++||++|++|+||+|||
T Consensus 346 tvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~~de 425 (497)
T COG5265 346 TVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILILDE 425 (497)
T ss_pred ceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEEEeh
Confidence 999999999999876 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHH
Q 000755 1218 ATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVA 1289 (1300)
Q Consensus 1218 pTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~ 1289 (1300)
+||+||..|++.||..|++..+++|.++||||++|+.++|.|+||++|+|+|.|+|++|+.. +|.|++||.
T Consensus 426 atsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 426 ATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred hhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHHc-CChHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999986 899999985
No 89
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.6e-57 Score=566.32 Aligned_cols=389 Identities=23% Similarity=0.282 Sum_probs=330.1
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVL 978 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 978 (1300)
++..+......+.+.+.+.|+++|+.+||+|+.++++.+++.+..+...+..........+..........+...+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (569)
T PRK10789 162 HERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGG 241 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444556778899999999999999999999999998888777666555544444333333333222222222122
Q ss_pred -HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEE
Q 000755 979 -LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDI 1057 (1300)
Q Consensus 979 -~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~ 1057 (1300)
...+..|.++.|.+..+..|...+..++..+...+..++....+.+|+.++.+.+++.+. ...+.+ +..+.|++
T Consensus 242 g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~--~~~~~I~~ 316 (569)
T PRK10789 242 GSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKD---GSEPVP--EGRGELDV 316 (569)
T ss_pred HHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC---CCCCCC--CCCCcEEE
Confidence 233457889999999999999999999999999999999999999999999876544321 111111 23467999
Q ss_pred EeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcC
Q 000755 1058 LNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQ 1137 (1300)
Q Consensus 1058 ~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ 1137 (1300)
+|++++|+++.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+|+.+++..++|++++|+||
T Consensus 317 ~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q 396 (569)
T PRK10789 317 NIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQ 396 (569)
T ss_pred EEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEcc
Confidence 99999998655579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000755 1138 DPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLD 1216 (1300)
Q Consensus 1138 ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLD 1216 (1300)
+|.+|++|+|+|+.+. .+.++++++++++.+++++++.++|+|+||.++++|.+||||||||++||||++++|+|||||
T Consensus 397 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlD 476 (569)
T PRK10789 397 TPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILD 476 (569)
T ss_pred CCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999875 467899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHhh
Q 000755 1217 EATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQ 1293 (1300)
Q Consensus 1217 EpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~~ 1293 (1300)
|||++||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.|++++++++ ++.|+++++....
T Consensus 477 Epts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 477 DALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred CccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999999988788999999999999999999999999999999999999975 6889999986543
No 90
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=9.9e-58 Score=566.55 Aligned_cols=350 Identities=26% Similarity=0.346 Sum_probs=297.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 898 ARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLV 977 (1300)
Q Consensus 898 ~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 977 (1300)
.+...+......+...+++.|.++|+++||+|+.++.+.+++.+..+...+..........+......++..+...++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (529)
T TIGR02868 178 ARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALW 257 (529)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556788999999999999999999999999999988887777666555544444444444443333333222
Q ss_pred H-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEE
Q 000755 978 L-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVD 1056 (1300)
Q Consensus 978 ~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~ 1056 (1300)
+ ...+..|.++.|.+..++.|...+..++..+...+..+.+...+.+|+.++++.++|.+.. +...+...+|..+.|+
T Consensus 258 ~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~~~~~~~~~~~~I~ 336 (529)
T TIGR02868 258 AGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG-VVPAAGALGLGKPTLE 336 (529)
T ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC-CCCCCcccCCCCceEE
Confidence 2 2334578899999999999999999999999999999999999999999999876553211 1111111234557899
Q ss_pred EEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEc
Q 000755 1057 ILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIP 1136 (1300)
Q Consensus 1057 ~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vp 1136 (1300)
++||+|+|+++. ++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||+|++++ .+++|++++|||
T Consensus 337 ~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~ 414 (529)
T TIGR02868 337 LRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFA 414 (529)
T ss_pred EEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEc
Confidence 999999997643 599999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000755 1137 QDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVL 1215 (1300)
Q Consensus 1137 Q~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlL 1215 (1300)
|||.+|++|||||+.+. ++.+|++++++++.+++++++.++|+||||.+||+|.+||||||||+|||||++++|+||||
T Consensus 415 Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliL 494 (529)
T TIGR02868 415 QDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLL 494 (529)
T ss_pred cCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999875 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCCh
Q 000755 1216 DEATASVDTATDNLIQQTLRQHFSDCTVITIAHRI 1250 (1300)
Q Consensus 1216 DEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl 1250 (1300)
|||||+||++|++.|++.+++..+++|+|+||||+
T Consensus 495 DE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 495 DEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred eCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999988899999999995
No 91
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.2e-56 Score=561.16 Aligned_cols=397 Identities=23% Similarity=0.328 Sum_probs=332.6
Q ss_pred hhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000755 892 QYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLT 971 (1300)
Q Consensus 892 ~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~ 971 (1300)
.++.+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+......++..+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (585)
T TIGR01192 174 KLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTIS 253 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555667778899999999999999999999998888888777665554443333333322222333222
Q ss_pred HHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCC
Q 000755 972 FAFSLVL-LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWP 1050 (1300)
Q Consensus 972 ~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp 1050 (1300)
..+++++ ...+..|.++.|.+..++.|...+..++..+...+.++.....+.+|+.+..+.+++... ...+ ..++
T Consensus 254 ~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~~~-~~~~ 329 (585)
T TIGR01192 254 MMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE---PADA-PELP 329 (585)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CccC-CCCC
Confidence 2222222 233557889999999999999999999999999999999999999999998876543211 1111 1122
Q ss_pred -CCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHh
Q 000755 1051 -THGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1051 -~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr 1129 (1300)
..+.|+++||+++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|
T Consensus 330 ~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~ 408 (585)
T TIGR01192 330 NVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLR 408 (585)
T ss_pred CCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHH
Confidence 34679999999999754 3589999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1130 SRLSIIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
+.++|+||||.+|++|++||+.+. .+.++++++++++.+++++++.++|+|+||.++++|.+||||||||++|||||++
T Consensus 409 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~ 488 (585)
T TIGR01192 409 KSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILK 488 (585)
T ss_pred hheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999875 4578999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHH
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~ 1288 (1300)
+|+|||||||||+||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.|++++++++ ++.|++++
T Consensus 489 ~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~ 567 (585)
T TIGR01192 489 NAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK-DGRFYKLL 567 (585)
T ss_pred CCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-CChHHHHH
Confidence 99999999999999999999999999988788999999999999999999999999999999999999975 68999999
Q ss_pred HHHhhh
Q 000755 1289 AEYTQR 1294 (1300)
Q Consensus 1289 ~~~~~~ 1294 (1300)
+.+...
T Consensus 568 ~~~~~~ 573 (585)
T TIGR01192 568 RRSGLL 573 (585)
T ss_pred HhCccc
Confidence 877543
No 92
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.4e-56 Score=592.85 Aligned_cols=211 Identities=22% Similarity=0.277 Sum_probs=176.3
Q ss_pred eEEEEeeeeeeCC-----------CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CcceEEECCeec
Q 000755 1054 EVDILNLQVRYAP-----------HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP--TAGEIVIDGINI 1120 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~-----------~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p--~~G~I~idg~di 1120 (1300)
.+.++||++..+. +...+|+|||+++++||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 5899999988742 123699999999999999999999999999999999999873 789999999876
Q ss_pred CCCCHHHHhcccEEEcCCCCCCcc-cHHHhcCCC------CCCCHH----HHHHHHHHcCCcHHHHhhcCCCccccccCC
Q 000755 1121 SSIGLHDLRSRLSIIPQDPTMFEG-TVRNNLDPL------EEYKDE----EIWEALDKCQLGDEVRNKEGKLDSRVTENG 1189 (1300)
Q Consensus 1121 ~~i~~~~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~------~~~~d~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G 1189 (1300)
. ....|+.++|++|++.+++. ||+|||.+. ...+++ .+.++++.++|.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24567789999999887765 999998631 122322 36678888888653 355666444
Q ss_pred -CCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhh-hh-ccCEEEEEeC-
Q 000755 1190 -ENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITS-VI-DSDMVLLLSH- 1264 (1300)
Q Consensus 1190 -~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~-i~-~~D~v~vl~~- 1264 (1300)
..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|++.. .++|||+++|+++. +. .||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6899999999999999999999999999999999999999999999865 47899999999984 44 4999999996
Q ss_pred CEEEEecChh
Q 000755 1265 GIIEEYDSPT 1274 (1300)
Q Consensus 1265 G~i~e~g~~~ 1274 (1300)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 93
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-56 Score=557.00 Aligned_cols=374 Identities=19% Similarity=0.237 Sum_probs=318.7
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVL 978 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 978 (1300)
+...+......+...+++.|+++|+++||+|+.++.+.+++.+..++..+..................+..+...++.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (544)
T TIGR01842 166 KKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGL 245 (544)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445566778899999999999999999999999998888777665554443333333333333322222222222
Q ss_pred -HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEE
Q 000755 979 -LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDI 1057 (1300)
Q Consensus 979 -~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~ 1057 (1300)
......|.+++|.+..++.|...+..++..+...+.+++....+.+|+.++++.+++... ....+ +..+.|++
T Consensus 246 g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~~---~~~~~i~~ 319 (544)
T TIGR01842 246 GAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AMPLP---EPEGHLSV 319 (544)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CCCCC---CCCCeEEE
Confidence 234557889999999999999999999999999999999999999999999976655321 11111 23467999
Q ss_pred EeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcC
Q 000755 1058 LNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQ 1137 (1300)
Q Consensus 1058 ~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ 1137 (1300)
+|++++|+++.+++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|++++|+||
T Consensus 320 ~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q 399 (544)
T TIGR01842 320 ENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQ 399 (544)
T ss_pred EEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecC
Confidence 99999997655579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000755 1138 DPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLD 1216 (1300)
Q Consensus 1138 ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLD 1216 (1300)
+|.+|++|++||+.... +.++++++++++.++++++++++|+|+||.++++|.+||||||||++||||++++|++||||
T Consensus 400 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililD 479 (544)
T TIGR01842 400 DVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLD 479 (544)
T ss_pred CcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999998554 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHh
Q 000755 1217 EATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1217 EpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||++||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|++++.|+|+++++
T Consensus 480 Epts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 480 EPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999875 5799999999999988899999999999999999999975
No 94
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=9.8e-57 Score=517.01 Aligned_cols=444 Identities=23% Similarity=0.365 Sum_probs=344.4
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 681 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 681 (1300)
..+++++++..|+ ...+++||||+|++||++|++|+||+|||||+++|.|.|+|++|+|.++|+
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 4689999999997 356899999999999999999999999999999999999999999999995
Q ss_pred -EEEEecCCcCC-CCCHHHHHhcCCCC------CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 682 -KAYVAQSPWIQ-SGNIEDNILFGKPM------DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 682 -~ayv~Q~~~l~-~~Ti~eNI~fg~~~------~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
||+|+|++-++ +-|+.|||..|.+- +. ++.++..+..++.-| ..+....||-|||||
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vd-----------p~~~V~dLsVG~qQR 148 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVD-----------PDAKVADLSVGEQQR 148 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCC-----------ccceeecCCcchhHH
Confidence 59999999986 56999999999863 22 344444444444433 345667899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
|.|-+|||++|+++|||||||.|-|...+++|+-+-.-...|+|||+|||+++.+.. ||++-||+.|+++.. ++...
T Consensus 149 VEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt--~~~~~ 226 (501)
T COG3845 149 VEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGT--VDPVA 226 (501)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEee--ecCCC
Confidence 999999999999999999999999999999997543334569999999999998776 999999999998643 22100
Q ss_pred hcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhh
Q 000755 829 NSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVC 908 (1300)
Q Consensus 829 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~ 908 (1300)
+. +..++.++
T Consensus 227 ~~------------------------------------------------------------------t~~ela~l---- 236 (501)
T COG3845 227 ET------------------------------------------------------------------TEEELAEL---- 236 (501)
T ss_pred CC------------------------------------------------------------------CHHHHHHH----
Confidence 00 00011100
Q ss_pred hhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 000755 909 KAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIE 988 (1300)
Q Consensus 909 ~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~ 988 (1300)
..|.
T Consensus 237 --------------------------------------------------------------------------MvG~-- 240 (501)
T COG3845 237 --------------------------------------------------------------------------MVGR-- 240 (501)
T ss_pred --------------------------------------------------------------------------hcCC--
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCCCC
Q 000755 989 PAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHL 1068 (1300)
Q Consensus 989 ~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~~~ 1068 (1300)
+.....+ . ++.-|....++++|+++.-+..
T Consensus 241 ----------------------------------------------~v~~~~~--~-~~~~pg~~vL~V~~L~v~~~~~- 270 (501)
T COG3845 241 ----------------------------------------------EVVLRVV--K-PPSTPGEVVLEVEDLSVKDRRG- 270 (501)
T ss_pred ----------------------------------------------ccccccc--c-CCCCCCCeEEEEeeeEeecCCC-
Confidence 0000000 0 1112445579999999976543
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeec-CCCCHHHHhc-ccEEEcCCCC----CC
Q 000755 1069 PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINI-SSIGLHDLRS-RLSIIPQDPT----MF 1142 (1300)
Q Consensus 1069 ~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di-~~i~~~~lr~-~i~~vpQ~~~----lf 1142 (1300)
-..+++|||++++||++||.|-.|.|-+.|+.+|+|+.+|.+|+|.++|.|+ ...+..+.|. .++|||.|.. ..
T Consensus 271 ~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~ 350 (501)
T COG3845 271 VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVL 350 (501)
T ss_pred CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCcccc
Confidence 3579999999999999999999999999999999999999999999999997 6667777665 6999999984 45
Q ss_pred cccHHHhcCCCCC----------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000755 1143 EGTVRNNLDPLEE----------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKV 1212 (1300)
Q Consensus 1143 ~gTvr~Nl~~~~~----------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~i 1212 (1300)
+.|+.+|+-+... ....++.+..++. ++++ .-.+.+.+++ ..+||||++||+-+||-|.++|++
T Consensus 351 ~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~l-i~~f-dVr~~~~~~~----a~~LSGGNqQK~IlaREl~~~p~l 424 (501)
T COG3845 351 DLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAREL-IEEF-DVRAPSPDAP----ARSLSGGNQQKLILARELARRPDL 424 (501)
T ss_pred CccHHHHhhhhhccccccccccccCHHHHHHHHHHH-HHHc-CccCCCCCcc----hhhcCCcceehhhhhhhhccCCCE
Confidence 6699999853221 1112232221111 0000 0012333333 468999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||..+||.|||..+.+.|.+.|.+.. +++.|++||-+++++.. ||||.||.+|+++...+|++.
T Consensus 425 LI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~~ 490 (501)
T COG3845 425 LIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPPEEA 490 (501)
T ss_pred EEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceecccccccC
Confidence 99999999999999999999998865 58999999999999988 999999999999988877763
No 95
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=7.6e-56 Score=549.68 Aligned_cols=358 Identities=22% Similarity=0.349 Sum_probs=306.0
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000755 900 ELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSL-VL 978 (1300)
Q Consensus 900 ~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~ 978 (1300)
...+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..........+......++..+...+.. +.
T Consensus 170 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (529)
T TIGR02857 170 AAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYI 249 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445556788999999999999999999999999998888777666655555555555555554444333222 22
Q ss_pred HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEE
Q 000755 979 LISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDIL 1058 (1300)
Q Consensus 979 ~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~ 1058 (1300)
......|.++.|.+..++.|...+..++..+...+..+.....+.+|+.++++.+++... . .+...+..+.|+++
T Consensus 250 ~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~-~~~~~~~~~~i~~~ 324 (529)
T TIGR02857 250 GFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----K-APVTAAPAPSLEFS 324 (529)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----C-cCCCCCCCCeEEEE
Confidence 223347889999888888898889899999999999999999999999999875433211 1 11112234689999
Q ss_pred eeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCC
Q 000755 1059 NLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQD 1138 (1300)
Q Consensus 1059 ~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~ 1138 (1300)
||+|+|+++.+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|||||
T Consensus 325 ~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~ 404 (529)
T TIGR02857 325 GLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQH 404 (529)
T ss_pred EEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCC
Confidence 99999986555799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000755 1139 PTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1217 (1300)
Q Consensus 1139 ~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDE 1217 (1300)
|.+|++|+|||+... ...+|++++++++.++++++++++|+||||.++|+|.+||||||||++||||++++|+|+||||
T Consensus 405 ~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE 484 (529)
T TIGR02857 405 PFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDE 484 (529)
T ss_pred CcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999999999875 4578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEE
Q 000755 1218 ATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLL 1262 (1300)
Q Consensus 1218 pTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl 1262 (1300)
|||+||+++++.|++.|++..+++|+|+||||++++..||+|++|
T Consensus 485 ~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 485 PTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999987899999999999999999999986
No 96
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-55 Score=490.95 Aligned_cols=463 Identities=22% Similarity=0.307 Sum_probs=365.1
Q ss_pred HHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 371 KMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYM-HDPWLVILQVSLALLILYKNLGLASIAALFA 449 (1300)
Q Consensus 371 ~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~-~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~ 449 (1300)
.....+.-..|.+.+.|+.....+..+|.+---+..-..-|+.+.+++ ..+....+++++..+++++..|+......++
T Consensus 12 ~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~v 91 (497)
T COG5265 12 IAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLV 91 (497)
T ss_pred HHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHH
Confidence 334455667799999999988888888887766666666677766543 3445566788888888888888665444444
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q 000755 450 TVLIM-LTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRK----IEAGWLKKFLYTGA 524 (1300)
Q Consensus 450 ~~l~~-~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~----~E~~~l~~~~~~~~ 524 (1300)
++++. .+..........+.++..++-.+-...-.+.|-|..++|.|+-|+.+..+..+..+ .+.+.......+..
T Consensus 92 tv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~ 171 (497)
T COG5265 92 TVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNF 171 (497)
T ss_pred HHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 44333 33333333334444444444444455677899999999999999988888755433 22222211111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000755 525 MTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 525 ~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 604 (1300)
....++ +..+....+.+..-+..+.+|.|.+....++...+..|+..+......+.|++.-.++..+.+..+-...+.
T Consensus 172 gQ~~I~--~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~ 249 (497)
T COG5265 172 GQTAIF--STGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDA 249 (497)
T ss_pred hhHHHH--HHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccC
Confidence 111111 111122233344455678899999999999999999999999999999999999999999888655333322
Q ss_pred ccCCCCC-CCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--
Q 000755 605 VEKHPRG-SSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-- 681 (1300)
Q Consensus 605 ~~~~~~~-~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-- 681 (1300)
....+.. ...+.+.|++++|.|++ .+|+|+++||++++|+++||||++|+||||++++|.++|++.+|.|.++|+
T Consensus 250 pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdi 327 (497)
T COG5265 250 PDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDI 327 (497)
T ss_pred CCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhH
Confidence 2211111 23457999999999974 579999999999999999999999999999999999999999999999994
Q ss_pred -----------EEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 682 -----------KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 682 -----------~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
||.|||+..+||+|+..||.+|+| ..+++...+.+++++.+.++.+|+|++|.+||+|-.||||+|||
T Consensus 328 r~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqr 407 (497)
T COG5265 328 RDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQR 407 (497)
T ss_pred HHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHH
Confidence 699999999999999999999998 57888999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
+++||+++++|+|++|||+|||||.+|++.| +..++...+++|.++|.||++.+-.||.|+||++|+|+|.|+|+||++
T Consensus 408 vaiar~ilk~p~il~~deatsaldt~te~~i-q~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~ 486 (497)
T COG5265 408 VAIARTILKNPPILILDEATSALDTHTEQAI-QAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLA 486 (497)
T ss_pred HHHHHHHhcCCCEEEEehhhhHhhhhHHHHH-HHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHH
Confidence 9999999999999999999999999999988 566777889999999999999999999999999999999999999999
Q ss_pred cCchHHHHH
Q 000755 830 SGTDFMVLV 838 (1300)
Q Consensus 830 ~~~~~~~l~ 838 (1300)
.++.|.++.
T Consensus 487 ~~g~ya~mw 495 (497)
T COG5265 487 AGGLYAEMW 495 (497)
T ss_pred cCChHHHHh
Confidence 999887764
No 97
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.1e-53 Score=535.14 Aligned_cols=503 Identities=17% Similarity=0.138 Sum_probs=366.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 301 EIVFTAILALLYTLANYVGPYLIDTFVQYLNGERE--FKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVLVS 378 (1300)
Q Consensus 301 ~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~--~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~~ir~~L~~ 378 (1300)
.++..+++.++.+++....|++.+.++|.+...+. +....+.+++++++..++.++.... .+++..++|..+..
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~----~~~~~~~~r~~l~~ 172 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL----LKELKLRFRVRLTR 172 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 56777788888899999999999999998764332 1111222233333333444444333 44445555555555
Q ss_pred HHHHHHhc----CCchhhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000755 379 MVYNKGLT----LSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLILYKNLGLA-SIAALFATVL 452 (1300)
Q Consensus 379 ~Iy~K~L~----ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~-~~~~~~~~l~i~~~l~lL~~~lg~~-~l~~l~~~~l 452 (1300)
.+.++.++ .+...+++ ++|++++++++|++.+.+.+.. +..+...++.++.+++.++..+++. +++.++..++
T Consensus 173 ~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l 251 (659)
T TIGR00954 173 YLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFA 251 (659)
T ss_pred HHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 55554443 34334443 5799999999999999887543 4455556666666766666544543 2334455556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 453 IMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWG 532 (1300)
Q Consensus 453 ~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 532 (1300)
...+...+.+...+...+.++..++.....+|.++|+++||.|+.|+.+.+++.+.-+.-.+...+.....+....+...
T Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 331 (659)
T TIGR00954 252 TGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNI 331 (659)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 66677778888899999999999999999999999999999999999888887664433333333322222222211111
Q ss_pred H----HHHHHHHHHHHHHHh-c----CCcCHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000755 533 A----PTFVSVATFGACMLL-G----IPLESGKILS-ALA---TFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDD 599 (1300)
Q Consensus 533 ~----p~~v~~~~f~~~~~~-~----~~Lt~g~vft-~la---l~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e 599 (1300)
. ...+..+..+..++. . +.+|.|..++ +++ ++..+..|+..+...+..+.++.++.+||.++++.++
T Consensus 332 i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 332 VAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111222222232222 1 5688887655 333 3567789999999999999999999999999996532
Q ss_pred CCc------ccccC-----------------CCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCC
Q 000755 600 LQS------DVVEK-----------------HPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGS 656 (1300)
Q Consensus 600 ~~~------~~~~~-----------------~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~Gs 656 (1300)
..+ ..... .......+.|+++|++|+|+. ++++|+|+||+|++||+++|+|||||
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCC
Confidence 110 00000 000012346999999999963 34799999999999999999999999
Q ss_pred ChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCCCCHHHHHhcCC--------CCCHHHHHHHHHHhcchHHHhh
Q 000755 657 GKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSGNIEDNILFGK--------PMDREKYDRVLEACSLKKDLEI 726 (1300)
Q Consensus 657 GKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~~Ti~eNI~fg~--------~~~~~~~~~vl~~~~l~~dl~~ 726 (1300)
|||||+++|+|+++|++|+|.+++ .++||+|+|+++++|++|||.++. ..++++.+++++.+++.+.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999999865 689999999999999999999974 2456788899999999988877
Q ss_pred ccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc
Q 000755 727 LSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA 806 (1300)
Q Consensus 727 l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~ 806 (1300)
|.|++|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. .++|+|+|||+++.+..
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~-l~~--~~~tvI~isH~~~~~~~ 644 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRL-CRE--FGITLFSVSHRKSLWKY 644 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHH--cCCEEEEEeCchHHHHh
Confidence 899999876 5779999999999999999999999999999999999999888654 443 38999999999999999
Q ss_pred CCEEEEEeC
Q 000755 807 ADLILVMKD 815 (1300)
Q Consensus 807 ~d~i~~l~~ 815 (1300)
||+|++|+.
T Consensus 645 ~d~il~l~~ 653 (659)
T TIGR00954 645 HEYLLYMDG 653 (659)
T ss_pred CCEEEEEeC
Confidence 999999974
No 98
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.1e-53 Score=541.14 Aligned_cols=474 Identities=20% Similarity=0.220 Sum_probs=358.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHH
Q 000755 363 FRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGL 441 (1300)
Q Consensus 363 ~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~lL~~~lg~ 441 (1300)
+.....+++.-..|-..++++.++-+..+++..++|.|+|+.+.|++.+++... .+.......++++.+++++-....+
T Consensus 880 ~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~ 959 (1381)
T KOG0054|consen 880 FLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPW 959 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHH
Confidence 344556778888888889999999999999999999999999999999997644 3444445555555555555443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH-
Q 000755 442 ASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFL- 520 (1300)
Q Consensus 442 ~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~~f~~~i~~~R~~E~~~l~~~~- 520 (1300)
..++.+.+.++...+..++.+..+...+--...+.=-.+.++|.++|+-+|+.|+.|+.|.++..+.-+...+..-...
T Consensus 960 fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~ 1039 (1381)
T KOG0054|consen 960 FLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSIS 1039 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3333333333333333332222222222222233444568999999999999999999999887654433322111100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 000755 521 YTGAMTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDL 600 (1300)
Q Consensus 521 ~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~ 600 (1300)
..+.+..-+-.....++..+++.+.+..++..++|.+=-++++.-.+..-+..+-.....+-...+|.+||.+|.+.|++
T Consensus 1040 a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E 1119 (1381)
T KOG0054|consen 1040 ANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE 1119 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC
Confidence 00000001111122222222222222223337788887777777777777777777788888889999999999986654
Q ss_pred CcccccCC-CC--CCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEE
Q 000755 601 QSDVVEKH-PR--GSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLK 677 (1300)
Q Consensus 601 ~~~~~~~~-~~--~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~ 677 (1300)
.+...+.. |+ =+.++.|+|+|++.+|.++ .+++||||||+|++||+++|||++|||||||+++|.+..+|.+|+|.
T Consensus 1120 ~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~ 1198 (1381)
T KOG0054|consen 1120 APLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEIL 1198 (1381)
T ss_pred CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEE
Confidence 22222111 22 2356899999999999865 57899999999999999999999999999999999999999999999
Q ss_pred EcC-------------eEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCH
Q 000755 678 LCG-------------TKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSG 744 (1300)
Q Consensus 678 ~~g-------------~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSG 744 (1300)
+|| +++.+||||.+|+||+|.|+==-.++++++.+++++.|.|++.++.+|.|.+++|.|+|.|+|-
T Consensus 1199 IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~Sv 1278 (1381)
T KOG0054|consen 1199 IDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSV 1278 (1381)
T ss_pred EcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCCh
Confidence 998 3599999999999999999976667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecCh
Q 000755 745 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKY 824 (1300)
Q Consensus 745 GQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~ 824 (1300)
||||-++|||||+++++|++|||+|+++|++|.. +.++.++...+++|||.|+||++.+..+|||+|||+|+|+|.|+|
T Consensus 1279 GQRQLlCLARALLr~skILvLDEATAsVD~~TD~-lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP 1357 (1381)
T KOG0054|consen 1279 GQRQLLCLARALLRKSKILVLDEATASVDPETDA-LIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSP 1357 (1381)
T ss_pred HHHHHHHHHHHHhccCCEEEEecccccCChHHHH-HHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCCh
Confidence 9999999999999999999999999999999954 558899999999999999999999999999999999999999999
Q ss_pred HHHHhcC-chHHHHH
Q 000755 825 NDILNSG-TDFMVLV 838 (1300)
Q Consensus 825 ~~l~~~~-~~~~~l~ 838 (1300)
.+|+++. ..|.+.+
T Consensus 1358 ~~Ll~~~~S~f~~~l 1372 (1381)
T KOG0054|consen 1358 AELLSDKDSLFSSLL 1372 (1381)
T ss_pred HHHHhCCcchHHHHH
Confidence 9999764 4454343
No 99
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.9e-51 Score=510.18 Aligned_cols=363 Identities=18% Similarity=0.163 Sum_probs=285.8
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchH--HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQES--RFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSL 976 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 976 (1300)
++..+......+.+.+++.|.+.|+.++|+|+.++ ...+++.+..+++.+................+++..+..++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (555)
T TIGR01194 177 FKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCAL 256 (555)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444556788999999999999999999854 3344555544444443332222222111222222222111111
Q ss_pred HHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcc--cc-CCC--CCCCCC
Q 000755 977 VLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVI--EE-SRP--DCSWPT 1051 (1300)
Q Consensus 977 ~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~--~~-~~~--~~~wp~ 1051 (1300)
++ ....|.++.|.+..++.|...+..++..+...+.+++....|.+|+.++.+.+.+++... ++ ... .+....
T Consensus 257 ~~--~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (555)
T TIGR01194 257 FA--AAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKS 334 (555)
T ss_pred HH--HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCC
Confidence 11 112367888988889999999999999999999999999999999999976432221110 00 000 011123
Q ss_pred CceEEEEeeeeeeCCC---CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH
Q 000755 1052 HGEVDILNLQVRYAPH---LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL 1128 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~---~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l 1128 (1300)
.+.|+++||+++|++. .+++|+|+||++++||++|||||||||||||+++|+|+++|++|+|.+||+|+.+++.+++
T Consensus 335 ~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~ 414 (555)
T TIGR01194 335 VDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDY 414 (555)
T ss_pred CceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHH
Confidence 4689999999999753 2369999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1129 RSRLSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
|++++++|||+.+|++|+++|.. .+.++++++++++.+++++++..+|+|+||. .+||||||||++||||+++
T Consensus 415 ~~~i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~ 487 (555)
T TIGR01194 415 RDLFSAIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLE 487 (555)
T ss_pred HhhCcEEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHc
Confidence 99999999999999999999964 3567899999999999999999999999984 7899999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHH-h-cCCcEEEEEeCChhhhhccCEEEEEeCCEEEEe
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQ-H-FSDCTVITIAHRITSVIDSDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~-~-~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~ 1270 (1300)
+|+|||||||||+||+++++.+++.+.+ . .+++|+|+||||++++..||+|++|++|+++|.
T Consensus 488 ~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 488 DRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999887643 3 358999999999999989999999999999975
No 100
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8e-51 Score=465.97 Aligned_cols=366 Identities=21% Similarity=0.269 Sum_probs=294.9
Q ss_pred hhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCc
Q 000755 908 CKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTF-AFSLVLLISIPKGV 986 (1300)
Q Consensus 908 ~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~-~~~~~~~~~~~~g~ 986 (1300)
....-.++...+....++|++.|......+++.+....+........-.+.-++...-.+-.+.- .+..+-......|.
T Consensus 193 ~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge 272 (580)
T COG4618 193 ASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGE 272 (580)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCc
Confidence 33445567777889999999999987776666554444332222111111111111111111111 11111123355778
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceEEEEeeeeeeCC
Q 000755 987 IEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAP 1066 (1300)
Q Consensus 987 ~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i~~~~v~~~y~~ 1066 (1300)
+++|.+...-...-..-.++...+..|.++-....|..|+.+.+...++.....+ -| ..+|.+.++++++.-++
T Consensus 273 ~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~---LP---~P~g~L~Ve~l~~~PPg 346 (580)
T COG4618 273 ITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERMP---LP---APQGALSVERLTAAPPG 346 (580)
T ss_pred CCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCC---CC---CCCceeeEeeeeecCCC
Confidence 8888765544444445566778889999999999999999999875444321111 11 12689999999997766
Q ss_pred CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccH
Q 000755 1067 HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTV 1146 (1300)
Q Consensus 1067 ~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTv 1146 (1300)
...++++|+||++.+||-+|||||||||||||.++|.|..+|.+|.|.+||-|+.+.+.+++-++|||+|||-.||+|||
T Consensus 347 ~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTI 426 (580)
T COG4618 347 QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTI 426 (580)
T ss_pred CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHH
Q 000755 1147 RNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTA 1225 (1300)
Q Consensus 1147 r~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~ 1225 (1300)
.||+.-+. +.+++.|.++.+.++.+|.|.++|+||||.|||+|..||||||||++||||+..+|.+++||||-|+||.+
T Consensus 427 aeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~ 506 (580)
T COG4618 427 AENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSE 506 (580)
T ss_pred HHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchh
Confidence 99997665 77888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1226 TDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1226 t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
-|+.+.++|.+.. +++|+|+||||++.+..+|+|+||++|++..+|+.+|++++
T Consensus 507 GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 507 GEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999998865 58999999999999999999999999999999999999864
No 101
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.8e-51 Score=461.37 Aligned_cols=238 Identities=37% Similarity=0.675 Sum_probs=226.6
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
|.|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|++||.++..++..++|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997555679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000755 1133 SIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKV 1212 (1300)
Q Consensus 1133 ~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~i 1212 (1300)
+|+||+|.+|++|+++|++++...++++++++++.+++.+++.++|++||+.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999988776788999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHHHh
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYT 1292 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~~~ 1292 (1300)
|||||||++||+.+++.+++.|++.+.++|||+||||++++..||||++|++|+++++|+|++++++ .+.|++++.+..
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999988788999999999999999999999999999999999999985 589999997665
No 102
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=4.2e-50 Score=462.43 Aligned_cols=473 Identities=20% Similarity=0.323 Sum_probs=312.4
Q ss_pred cceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCeEEEEecCCcCCC
Q 000755 614 ETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQS 693 (1300)
Q Consensus 614 ~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~~ayv~Q~~~l~~ 693 (1300)
..+|.+.|.++++. ..+.++|..|++.+|++++|+|+|||||||+|++|.|-..|..-.+.+ ...+++..--.
T Consensus 73 s~dvk~~sls~s~~---g~~l~kd~~~El~~g~rygLiG~nG~Gkst~L~~i~~~e~P~p~~~d~----y~ls~e~~ps~ 145 (614)
T KOG0927|consen 73 SRDVKIESLSLSFH---GVELIKDVTLELNRGRRYGLIGPNGSGKSTFLRAIAGREVPIPEHIDF----YLLSREIEPSE 145 (614)
T ss_pred cccceeeeeeeccC---CceeeeeeeEEecCCceEEEEcCCCCcHhHHHHHHhcCCCCCCcccch----hhhcccCCCch
Confidence 34799999999996 467999999999999999999999999999999999988775543321 22233221111
Q ss_pred CCHHHHHhcCCCC-------CHHHHHHHHHHhc-------------chHH-----Hhh-c-cCC-CcccccCCCCCCCHH
Q 000755 694 GNIEDNILFGKPM-------DREKYDRVLEACS-------------LKKD-----LEI-L-SFG-DQTVIGERGINLSGG 745 (1300)
Q Consensus 694 ~Ti~eNI~fg~~~-------~~~~~~~vl~~~~-------------l~~d-----l~~-l-~~G-d~t~ige~g~~LSGG 745 (1300)
.+..+-+.+-..- -.|+|...++.-. ++.| +.. + ..| ..........+||||
T Consensus 146 ~~av~~v~~~~~~e~~rle~~~E~l~~~~d~~~~~~l~~~~~r~~~~d~~~~~~k~~~il~glgf~~~m~~k~~~~~SgG 225 (614)
T KOG0927|consen 146 KQAVQAVVMETDHERKRLEYLAEDLAQACDDKEKDELDELYERLDEMDNDTFEAKAAKILHGLGFLSEMQDKKVKDLSGG 225 (614)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhCchhHHHHHHHHHHhcCCCHhHHHHHhhccCch
Confidence 1222222211110 1112222111100 0000 000 0 112 233445567899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCc-EEEEEecCCCcccc-CCEEEEEeCCe-EEEec
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSK-TVIYVTHQVEFLPA-ADLILVMKDGK-ITQAG 822 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~-TvIlvtH~~~~l~~-~d~i~~l~~G~-i~~~g 822 (1300)
||.|++|||||..+|++|||||||++||.++..++- +.+... ++ |+|+++|..++++. |.+|+.|++++ +.+.|
T Consensus 226 wrmR~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLe-e~L~k~--d~~~lVi~sh~QDfln~vCT~Ii~l~~kkl~~y~G 302 (614)
T KOG0927|consen 226 WRMRAALARALFQKPDLLLLDEPTNHLDLEAIVWLE-EYLAKY--DRIILVIVSHSQDFLNGVCTNIIHLDNKKLIYYEG 302 (614)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHH-HHHHhc--cCceEEEEecchhhhhhHhhhhheecccceeeecC
Confidence 999999999999999999999999999999977663 333332 44 89999999999998 99999999999 77999
Q ss_pred ChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHH
Q 000755 823 KYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELS 902 (1300)
Q Consensus 823 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~ 902 (1300)
+|+++.....+..+. +
T Consensus 303 nydqy~~tr~E~~~~--------------------------------------------------------------q-- 318 (614)
T KOG0927|consen 303 NYDQYVKTRSELEEN--------------------------------------------------------------Q-- 318 (614)
T ss_pred CHHHHhhHHHHHhHH--------------------------------------------------------------H--
Confidence 999987543211100 0
Q ss_pred HHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000755 903 RLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISI 982 (1300)
Q Consensus 903 rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~ 982 (1300)
.+.|.+++.-.+....++.. .
T Consensus 319 -----------------------~K~~~kqqk~i~~~K~~ia~------------------------------------~ 339 (614)
T KOG0927|consen 319 -----------------------MKAYEKQQKQIAHMKDLIAR------------------------------------F 339 (614)
T ss_pred -----------------------HHHHHHHHhHHHHhhHHHHh------------------------------------h
Confidence 00111111111110000000 0
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCCCCccccCCCCCCCCCCceEEE
Q 000755 983 PKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTC-----ISSEPPLVIEESRPDCSWPTHGEVDI 1057 (1300)
Q Consensus 983 ~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~-----~~~e~~~~~~~~~~~~~wp~~g~i~~ 1057 (1300)
..| .+ .+.....|.+...+-+. .+.....+..-..|...--....|.+
T Consensus 340 g~g--~a-------------------------~~~rka~s~~K~~~km~~~gL~ek~~~~k~l~~~f~~vg~~p~pvi~~ 392 (614)
T KOG0927|consen 340 GHG--SA-------------------------KLGRKAQSKEKTLDKMEADGLTEKVVGEKVLSFRFPEVGKIPPPVIMV 392 (614)
T ss_pred ccc--ch-------------------------hhhHHHhhhhhhHHHHhhccccccccCCceEEEEcccccCCCCCeEEE
Confidence 000 00 00000011111111110 00000000000000000001236999
Q ss_pred EeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcC
Q 000755 1058 LNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQ 1137 (1300)
Q Consensus 1058 ~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ 1137 (1300)
+|++|+|.++. .++++++|-|..++++++|||||+|||||++++.|.+.|..|.|.-.-.. ++++.-|
T Consensus 393 ~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~~~y~Q 460 (614)
T KOG0927|consen 393 QNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KLPRYNQ 460 (614)
T ss_pred eccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cchhhhh
Confidence 99999998764 79999999999999999999999999999999999999999988654321 2334444
Q ss_pred CC---CCCcccHHHhcCC-CC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000755 1138 DP---TMFEGTVRNNLDP-LE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKV 1212 (1300)
Q Consensus 1138 ~~---~lf~gTvr~Nl~~-~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~i 1212 (1300)
.. ..++-|.-+++.+ +. .-..+++...|.++||....+.. ++ ++||+|||.||++||+++++|.|
T Consensus 461 h~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~kqP~l 530 (614)
T KOG0927|consen 461 HLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAVKQPHL 530 (614)
T ss_pred hhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHhcCCcE
Confidence 32 3456677777654 23 34567788899999997543332 23 57999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEe
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~ 1270 (1300)
|||||||++||.++...+.++|.++ ..+||+|||+...|.. +++|++.++|.+...
T Consensus 531 LlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 531 LLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred EEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 9999999999999999999999876 6799999999999988 999999999998764
No 103
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=5.7e-48 Score=480.37 Aligned_cols=355 Identities=17% Similarity=0.197 Sum_probs=264.0
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcch---HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 899 RELSRLVGVCKAPVIQHFSETISGSTTIRSFDQE---SRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFS 975 (1300)
Q Consensus 899 r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e---~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~ 975 (1300)
+...+......+...+++.|.++|+.+++ ++.+ +.+.+++.+..+...+..................+...++++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (547)
T PRK10522 172 YKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLV 250 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344566788999999999999995 4433 3455666555555443332221111111111111111111111
Q ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCCCceE
Q 000755 976 LVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEV 1055 (1300)
Q Consensus 976 ~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~i 1055 (1300)
.++.... +....+.+++...+.+.+..++..+...+.++.....+.+|+.++.+.+.++.. +...+. |..+.|
T Consensus 251 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~--~~~~~~---~~~~~i 323 (547)
T PRK10522 251 FYMANSL--GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF--PRPQAF---PDWQTL 323 (547)
T ss_pred HHHHHHh--hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc--cccccc---CcCceE
Confidence 1111111 112333344444444455677888888889999999999999998765443211 111111 223579
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEE
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSII 1135 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~v 1135 (1300)
+++||+|+|+++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+
T Consensus 324 ~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 402 (547)
T PRK10522 324 ELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAV 402 (547)
T ss_pred EEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEE
Confidence 999999999753 4699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000755 1136 PQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVL 1215 (1300)
Q Consensus 1136 pQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlL 1215 (1300)
||||.+|++|+++| ....++++++++++++++.+.+.. +++. .+|.+||||||||++||||++++|+||||
T Consensus 403 ~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ilil 473 (547)
T PRK10522 403 FTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLL 473 (547)
T ss_pred ecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999 235678889999999998776543 3332 14889999999999999999999999999
Q ss_pred eCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhccCEEEEEeCCEEEEec
Q 000755 1216 DEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1216 DEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g 1271 (1300)
|||||+||+++++.+.+.+.+.. +++|+|+||||++++..||+|++|++|+++|..
T Consensus 474 DE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 474 DEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELT 531 (547)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEec
Confidence 99999999999999999987654 479999999999999999999999999999873
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-47 Score=442.66 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=218.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCccc------cCCC---CCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEEC
Q 000755 1019 KIISVERILQYTCISSEPPLVIE------ESRP---DCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVG 1089 (1300)
Q Consensus 1019 ~~~sveRi~~~~~~~~e~~~~~~------~~~~---~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG 1089 (1300)
.+.+++|+.+|...+.|.....+ +..+ +..||..+.|+++|++++|++..+++|+|+||+|++||++||+|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG 115 (329)
T PRK14257 36 KLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIG 115 (329)
T ss_pred ccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEEC
Confidence 45667777777766554322111 1111 34699999999999999997555679999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCC-----CCcceEEECCeecC--CCCHHHHhcccEEEcCCCCCCcccHHHhcCCC---CCCCHH
Q 000755 1090 RTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINIS--SIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPL---EEYKDE 1159 (1300)
Q Consensus 1090 ~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~--~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~~~d~ 1159 (1300)
|||||||||+++|+|+++ |++|+|.+||+++. .++...+|++++|+||+|.+|++|+++|+++. ...+++
T Consensus 116 ~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~ 195 (329)
T PRK14257 116 PSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDR 195 (329)
T ss_pred CCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChH
Confidence 999999999999999997 57999999999997 45667889999999999999999999999842 234444
Q ss_pred H-----HHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHH
Q 000755 1160 E-----IWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTL 1234 (1300)
Q Consensus 1160 ~-----i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l 1234 (1300)
+ +.++++.+++.+ ++++.+++.|.+||||||||+|||||++++|+||||||||++||+.+.+.+++.|
T Consensus 196 ~~~~~~~~~~l~~~~L~~-------~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i 268 (329)
T PRK14257 196 KILEKIVEKSLKSAALWD-------EVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELI 268 (329)
T ss_pred HHHHHHHHHHHHHcCCcc-------hhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 4 355678887643 4567788999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCC
Q 000755 1235 RQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSS 1282 (1300)
Q Consensus 1235 ~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~ 1282 (1300)
++.++++|+|+|||+++++.+ ||||+||++|+|+|.|+|+++++++..
T Consensus 269 ~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~~ 317 (329)
T PRK14257 269 LELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPKN 317 (329)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCc
Confidence 998888999999999999998 999999999999999999999976654
No 105
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.3e-47 Score=434.76 Aligned_cols=457 Identities=22% Similarity=0.312 Sum_probs=317.2
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------eEEEEec
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------TKAYVAQ 687 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------~~ayv~Q 687 (1300)
.+|.+.+.+.+|. .+..|.+-++++..|-++++||+||+||||||++|.. |.|..-. -.-..-|
T Consensus 79 ~Di~~~~fdLa~G---~k~LL~~a~L~L~~GrRYGLvGrNG~GKsTLLRaia~------~~v~~f~veqE~~g~~t~~~~ 149 (582)
T KOG0062|consen 79 KDIHIDNFDLAYG---GKILLNKANLTLSRGRRYGLVGRNGIGKSTLLRAIAN------GQVSGFHVEQEVRGDDTEALQ 149 (582)
T ss_pred cceeeeeeeeeec---chhhhcCCceeeecccccceeCCCCCcHHHHHHHHHh------cCcCccCchhheeccchHHHh
Confidence 4678888888885 5789999999999999999999999999999999986 3332111 0001111
Q ss_pred CCcCCCCCHHHHHhcCCC---C--C-HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 000755 688 SPWIQSGNIEDNILFGKP---M--D-REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDAD 761 (1300)
Q Consensus 688 ~~~l~~~Ti~eNI~fg~~---~--~-~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ 761 (1300)
+ -+-.+|-+.-.+.-.+ . + ++-|.+++...+..++....|- ..||||-|-|++|||||.++||
T Consensus 150 ~-~l~~D~~~~dfl~~e~~l~~~~~l~ei~~~~L~glGFt~emq~~pt----------~slSGGWrMrlaLARAlf~~pD 218 (582)
T KOG0062|consen 150 S-VLESDTERLDFLAEEKELLAGLTLEEIYDKILAGLGFTPEMQLQPT----------KSLSGGWRMRLALARALFAKPD 218 (582)
T ss_pred h-hhhccHHHHHHHHhhhhhhccchHHHHHHHHHHhCCCCHHHHhccc----------cccCcchhhHHHHHHHHhcCCC
Confidence 1 1222333333332221 0 1 2334447777777777776653 4799999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEE-EecChHHHHhcCchHHHHHH
Q 000755 762 IYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKIT-QAGKYNDILNSGTDFMVLVG 839 (1300)
Q Consensus 762 illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~l~~ 839 (1300)
||||||||++||.....++- +.+..+ ..|+|+|||+..||+. |.-|+.+++-++- +.|+|++..+...+
T Consensus 219 lLLLDEPTNhLDv~av~WLe-~yL~t~--~~T~liVSHDr~FLn~V~tdIIH~~~~kL~~YkGN~~~Fvk~k~E------ 289 (582)
T KOG0062|consen 219 LLLLDEPTNHLDVVAVAWLE-NYLQTW--KITSLIVSHDRNFLNTVCTDIIHLENLKLDYYKGNYSQFVKTKPE------ 289 (582)
T ss_pred EEeecCCcccchhHHHHHHH-HHHhhC--CceEEEEeccHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHhhHH------
Confidence 99999999999999877663 333332 3799999999999997 8999999887765 67887776543221
Q ss_pred HHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhhhhhHHHHHHHH
Q 000755 840 AHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVCKAPVIQHFSET 919 (1300)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~ 919 (1300)
+.... |+-|
T Consensus 290 ----~~~n~------------------------------------------qref------------------------- 298 (582)
T KOG0062|consen 290 ----AKKNQ------------------------------------------QREF------------------------- 298 (582)
T ss_pred ----hhhhh------------------------------------------hhhc-------------------------
Confidence 10000 0000
Q ss_pred hhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHH
Q 000755 920 ISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYG 999 (1300)
Q Consensus 920 l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~ 999 (1300)
-.+...++......|.++-+ +.-.+
T Consensus 299 ----------e~q~~~R~h~q~fid~FrYn-----------------------------------a~ra~---------- 323 (582)
T KOG0062|consen 299 ----------EVQMKYRAHLQVFIDKFRYN-----------------------------------AARAS---------- 323 (582)
T ss_pred ----------chHHHHHHHHHHHHHHhccC-----------------------------------cccch----------
Confidence 00001111111111111100 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC----ccccCCCC-CCCCCCceEEEEeeeeeeCCCCCcceee
Q 000755 1000 LNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPL----VIEESRPD-CSWPTHGEVDILNLQVRYAPHLPLVLRG 1074 (1300)
Q Consensus 1000 ~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~----~~~~~~~~-~~wp~~g~i~~~~v~~~y~~~~~~vL~~ 1074 (1300)
.++ .||.-+-..|.-.+. .+...-|. ..-+++..+++.+|+|.|.++.++.+++
T Consensus 324 ---------------svq------SRIk~L~kl~~lk~~~~~~~~~~~fP~~~e~~~~p~l~i~~V~f~y~p~~y~~~~~ 382 (582)
T KOG0062|consen 324 ---------------SVQ------SRIKMLGKLPALKSTLIEVLIGFLFPTEGEVLSPPNLRISYVAFEYTPSEYQWRKQ 382 (582)
T ss_pred ---------------hHH------HHHHHhccCCCCCccceecccceecCCCCCcCCCCeeEEEeeeccCCCcchhhhhc
Confidence 000 122222112211110 01111122 1223456799999999999887789999
Q ss_pred eeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCC-cccHHH--hc-
Q 000755 1075 LTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMF-EGTVRN--NL- 1150 (1300)
Q Consensus 1075 isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf-~gTvr~--Nl- 1150 (1300)
+++.+..-+++++||+||+||||+++++.+-.+|..|.+.+.+ |.+|+|-.|...-+ +-.+-. -+
T Consensus 383 ~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ri~~f~Qhhvd~l~~~v~~vd~~~ 451 (582)
T KOG0062|consen 383 LGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLRIKYFAQHHVDFLDKNVNAVDFME 451 (582)
T ss_pred cCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cceecchhHhhhhHHHHHhHHHHHHH
Confidence 9999999999999999999999999999999999999988875 67899999976533 222211 11
Q ss_pred CCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHH
Q 000755 1151 DPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLI 1230 (1300)
Q Consensus 1151 ~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i 1230 (1300)
..++..+++|++..|...|+...+...+ -..||||||-||++|.....+|.+|||||||++||.++-..+
T Consensus 452 ~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL 521 (582)
T KOG0062|consen 452 KSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGAL 521 (582)
T ss_pred HhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHH
Confidence 1123448999999999998876554332 246899999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEe
Q 000755 1231 QQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1231 ~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~ 1270 (1300)
-++|+.. +..||+|||+.+.+.. |+.+++.++|+|..+
T Consensus 522 ~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 522 AKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred HHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 9999876 5689999999999988 999999999999863
No 106
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-46 Score=393.69 Aligned_cols=217 Identities=28% Similarity=0.447 Sum_probs=194.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC-CCHHHHhccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS-IGLHDLRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~-i~~~~lr~~i 1132 (1300)
.|+++|++++|+.. .||+|||++|++||++.|+||||||||||+++|.|+.+|++|+|.+||.++.. .+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999865 59999999999999999999999999999999999999999999999987743 3678899999
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC----CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE----EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~----~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
|+|+|+..||+- |+.+|+.... ..+. +...+.|+++||.+.....|. .||||||||+|||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHHH
Confidence 999999999976 9999986321 2222 335568999999988887774 5699999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCC
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKS 1281 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~ 1281 (1300)
|||..+|+++++|||||+|||+....+.+.+++..+ +.|+|+|||.+..+.+ +|||+.|++|+|+|.|+|++++.++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 999999999999999999999999999999999764 7899999999999998 99999999999999999999998876
Q ss_pred Ch
Q 000755 1282 SS 1283 (1300)
Q Consensus 1282 ~~ 1283 (1300)
..
T Consensus 229 ~~ 230 (240)
T COG1126 229 SE 230 (240)
T ss_pred CH
Confidence 53
No 107
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.9e-44 Score=452.51 Aligned_cols=358 Identities=16% Similarity=0.153 Sum_probs=284.6
Q ss_pred hhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Q 000755 891 EQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSL 970 (1300)
Q Consensus 891 ~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 970 (1300)
-+++.+..+++.+......+.+.+.+.|.++|+++||+|+.++...+++.+..++..+..........++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34555566667777777788899999999999999999999999999988888887777777666666666666665432
Q ss_pred HHHHH--HHH-H-HHhc----CCcccHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-
Q 000755 971 TFAFS--LVL-L-ISIP----KGVIEPAIA-GLAVTY---GLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPP- 1037 (1300)
Q Consensus 971 ~~~~~--~~~-~-~~~~----~g~~~~~~~-gl~l~~---~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~- 1037 (1300)
..... ++. . +... .|.++.|.. +..++| ...+..++..+...+.+++....+.+|+.++.+.+++..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 111 1 1221 256776653 334554 455677888899999999999999999999986533210
Q ss_pred ------Cccc--cC-----CC------CCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHH
Q 000755 1038 ------LVIE--ES-----RP------DCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTL 1098 (1300)
Q Consensus 1038 ------~~~~--~~-----~~------~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTL 1098 (1300)
...+ +. .+ .......+.|+++||+++|+++ +++|+|+||+|++||++||+||||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 0000 00 00 0000134679999999999643 369999999999999999999999999999
Q ss_pred HHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCcccHHHhcCCC--------CCCCHHHHHHHHHHcCC
Q 000755 1099 IQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPL--------EEYKDEEIWEALDKCQL 1170 (1300)
Q Consensus 1099 l~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~--------~~~~d~~i~~~l~~~~l 1170 (1300)
+++|+|+++|++|+|.+|+ |++++|+||+|.+|++|+++|+... ...++++++++++.+++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999864 5789999999999999999999643 23568889999999999
Q ss_pred cHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCCh
Q 000755 1171 GDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRI 1250 (1300)
Q Consensus 1171 ~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl 1250 (1300)
.+++.+ |.|+|+..+ .+.+||||||||++||||++++|+++||||||++||+++++.+.+.+++. ++|+|+||||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 998877 899999876 57799999999999999999999999999999999999999999999875 89999999999
Q ss_pred hhhhccCEEEEEeC
Q 000755 1251 TSVIDSDMVLLLSH 1264 (1300)
Q Consensus 1251 ~~i~~~D~v~vl~~ 1264 (1300)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99988999999974
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-45 Score=403.52 Aligned_cols=225 Identities=26% Similarity=0.425 Sum_probs=196.2
Q ss_pred EEEEeeeeeeCCC---CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC---HHHH
Q 000755 1055 VDILNLQVRYAPH---LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG---LHDL 1128 (1300)
Q Consensus 1055 i~~~~v~~~y~~~---~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~---~~~l 1128 (1300)
|++++|++.|... ...+|+||||+|++||+.||||+||||||||++++.++-+|++|+|.+||.|+..++ ++.+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999762 356899999999999999999999999999999999999999999999999988776 4556
Q ss_pred hcccEEEcCCCCCCc-ccHHHhcCC-C--CCCCHH----HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1129 RSRLSIIPQDPTMFE-GTVRNNLDP-L--EEYKDE----EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf~-gTvr~Nl~~-~--~~~~d~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
|++||+|+|++.|++ .||.+|+.+ . ...+.+ ++.+.|+.+||.|...+.| .+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 789999999999997 599999964 2 223333 4567899999988766655 57899999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
+|||||..+|+||++|||||+|||+|.+.|.+.|++.. -+-||++|||.++.+++ ||||.||++|+|+|.|+..+++
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998754 37899999999999999 9999999999999999999999
Q ss_pred hcCCCh-HHHHHHH
Q 000755 1278 ENKSSS-FAQLVAE 1290 (1300)
Q Consensus 1278 ~~~~~~-f~~l~~~ 1290 (1300)
.++... =++++.+
T Consensus 231 ~~Pk~~~t~~fi~~ 244 (339)
T COG1135 231 ANPKHAITQEFIGE 244 (339)
T ss_pred cCcchHHHHHHHHh
Confidence 887543 3444443
No 109
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-45 Score=421.67 Aligned_cols=264 Identities=25% Similarity=0.341 Sum_probs=221.6
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcceEEEEeEEEEecCC
Q 000755 550 IPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPRGSSETAIEIVDGNFAWDIS 629 (1300)
Q Consensus 550 ~~Lt~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~ 629 (1300)
+++++..+|+.+++|+.+..|+..+|..... ..|+.+|+..++.+...... .......|+++|++|+|+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~nls~~y~~- 92 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--DFNHANVFEIRNFNFWYMN- 92 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--CCCcCceEEEEeeEEEecC-
Confidence 4678999999999999999998887765443 56899998766543211111 1123457999999999963
Q ss_pred CCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------------eEEEEecCC
Q 000755 630 SNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG---------------TKAYVAQSP 689 (1300)
Q Consensus 630 ~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g---------------~~ayv~Q~~ 689 (1300)
..+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++| .++||||+|
T Consensus 93 ~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~ 172 (329)
T PRK14257 93 RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKP 172 (329)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCC
Confidence 34579999999999999999999999999999999999996 5799998754 479999999
Q ss_pred cCCCCCHHHHHhcCCCC---C-HH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 000755 690 WIQSGNIEDNILFGKPM---D-RE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDAD 761 (1300)
Q Consensus 690 ~l~~~Ti~eNI~fg~~~---~-~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ 761 (1300)
|+|++|++|||.|+..+ + ++ .++++++.|++..++ ++.++++|.+|||||||||+||||++++|+
T Consensus 173 ~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p~ 245 (329)
T PRK14257 173 TPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEPE 245 (329)
T ss_pred ccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 99999999999987532 2 22 367778888876554 367899999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000755 762 IYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 762 illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
|+||||||++||+++.+.+ .+++..+.+++|+|+|||+++++.. ||+|++|++|+|++.|+++++....
T Consensus 246 IlLLDEPts~LD~~~~~~i-~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~ 315 (329)
T PRK14257 246 VLLMDEPTSALDPIATAKI-EELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHP 315 (329)
T ss_pred EEEEeCCcccCCHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCC
Confidence 9999999999999998885 5678877778999999999999887 9999999999999999999987643
No 110
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6.6e-44 Score=402.53 Aligned_cols=240 Identities=50% Similarity=0.817 Sum_probs=222.2
Q ss_pred CCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhc
Q 000755 1051 THGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRS 1130 (1300)
Q Consensus 1051 ~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~ 1130 (1300)
..|.|+++|++++|+.....+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 35789999999999764346999999999999999999999999999999999999999999999999998888888899
Q ss_pred ccEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1131 RLSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
+++|+||+|.+|++|+++|+.+.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999865444566788899999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHHH
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAE 1290 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~~ 1290 (1300)
++|||||||++||+.+.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++.+.+++.|+.++.+
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999998766899999999999998899999999999999999999998777888887754
No 111
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-45 Score=385.10 Aligned_cols=219 Identities=27% Similarity=0.469 Sum_probs=197.9
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+|+||+++|.+. .+++|+||+|++||.+.++|||||||||++++|.|+++|++|+|+|||.++++++..+||++|||
T Consensus 2 I~~~nvsk~y~~~--~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGNK--KAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCCc--eeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 7999999999853 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCcc-cHHHhcCCCCC---CC----HHHHHHHHHHcCCcH--HHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLEE---YK----DEEIWEALDKCQLGD--EVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~~---~~----d~~i~~~l~~~~l~~--~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
|-|..-||+. ||.+|+....+ .+ ++++.+.|+.++|.. +..+.| ..|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHHH
Confidence 9999999976 99999964322 22 445778899999963 555655 467999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCC
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKS 1281 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~ 1281 (1300)
||..+|+|++||||+++|||-++..+|+-+.+..+ ++|+|+||||+++... +|||.+|++|+|+.+|+|++++.++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999999999887543 7999999999999987 99999999999999999999999988
Q ss_pred ChHHH
Q 000755 1282 SSFAQ 1286 (1300)
Q Consensus 1282 ~~f~~ 1286 (1300)
..|-+
T Consensus 229 n~FV~ 233 (309)
T COG1125 229 NDFVE 233 (309)
T ss_pred HHHHH
Confidence 77743
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=375.80 Aligned_cols=220 Identities=26% Similarity=0.456 Sum_probs=199.7
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCc-----ceEEECCeecCC--CCH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTA-----GEIVIDGINISS--IGL 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~-----G~I~idg~di~~--i~~ 1125 (1300)
..++++||++.|+.. .+|+|||++|++++++|++||||||||||++++.|+.+... |+|.++|+||.+ ++.
T Consensus 6 ~~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 468999999999865 59999999999999999999999999999999999999876 999999999976 578
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCCC---C----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPLE---E----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
-++|+++|+|+|.|.-|+.||+||+.+.. . .-|+-++++|+++.||+.+... +.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDr-------L~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDR-------LHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHH-------hhCCccCCChhHHH
Confidence 89999999999999999999999997542 1 1245578899999999998763 34567789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
||||||||.-+|+||+||||||+|||.+...|.+.|.++.++-||++|||.+.-... +|+..++..|+++|+|+.++++
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999888999999999999988 9999999999999999999999
Q ss_pred hcCC
Q 000755 1278 ENKS 1281 (1300)
Q Consensus 1278 ~~~~ 1281 (1300)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8764
No 113
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2e-43 Score=393.89 Aligned_cols=234 Identities=29% Similarity=0.495 Sum_probs=212.8
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+...+++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999988887888899999
Q ss_pred EcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000755 1135 IPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVL 1213 (1300)
Q Consensus 1135 vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iL 1213 (1300)
+||++.+|+.|+++|+.... ....+++.+.++..++.+.+..++.++++.....+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999899999997543 24456677788888999999999889999888899999999999999999999999999
Q ss_pred EEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHH
Q 000755 1214 VLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVA 1289 (1300)
Q Consensus 1214 lLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~ 1289 (1300)
||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999987778999999999999977999999999999999999999875 567776654
No 114
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.4e-43 Score=387.05 Aligned_cols=221 Identities=59% Similarity=1.000 Sum_probs=207.2
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
|.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 46899999999975444699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000755 1133 SIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKV 1212 (1300)
Q Consensus 1133 ~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~i 1212 (1300)
+|+||++.+|++|+++|+.+......+++.++++.+++.+.+..++.|+++...+.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987666677889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecCh
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~ 1273 (1300)
+||||||++||+.+.+.+.+.|++..++.|||++||+++.+..||++++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987667899999999999988999999999999988763
No 115
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.3e-43 Score=387.64 Aligned_cols=213 Identities=31% Similarity=0.470 Sum_probs=189.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|.+|+|++||.++.+++.+++.++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 4789999999985 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCC-CcccHHHhcCCC--------CCCC--HH-HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1134 IIPQDPTM-FEGTVRNNLDPL--------EEYK--DE-EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1134 ~vpQ~~~l-f~gTvr~Nl~~~--------~~~~--d~-~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
||||++.. |.-||+|-+... ...+ |+ .+.++|+.+++.++..+. -..||||||||+.
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHHHH
Confidence 99999754 455998876422 2222 33 477889999998875543 2468999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||.++|+||+|||||++||....-.+++.+++.. ++.|||++.||++.... ||++++|++|+++..|+|++++.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999876 36999999999999876 99999999999999999999986
Q ss_pred c
Q 000755 1279 N 1279 (1300)
Q Consensus 1279 ~ 1279 (1300)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 4
No 116
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-42 Score=366.73 Aligned_cols=225 Identities=27% Similarity=0.456 Sum_probs=198.5
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---H
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---L 1128 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---l 1128 (1300)
...|++++|+++|+++ .|++||||+|++||++||+|+||||||||++++.|+++|++|+|.++|.|+..++.++ +
T Consensus 6 ~~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 3469999999999865 5999999999999999999999999999999999999999999999999999988654 6
Q ss_pred hcccEEEcCCCCCCcc-cHHHhcCC-CC---CCCHHHHHH----HHHHcCCcHH-HHhhcCCCccccccCCCCCChhHHH
Q 000755 1129 RSRLSIIPQDPTMFEG-TVRNNLDP-LE---EYKDEEIWE----ALDKCQLGDE-VRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf~g-Tvr~Nl~~-~~---~~~d~~i~~----~l~~~~l~~~-i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
|+++|+++|...||+. ||+||+.+ .. +.+++++.+ .|+.+||... ....| +.||||++.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~K 152 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRK 152 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHH
Confidence 8999999999999987 99999974 33 345555544 5788888776 33334 568999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
|++||||+.-+|+|+++||||+||||-+...+-+.|++..+ +.|+++||||++++.. ||||+++.+|+|+.+|++++
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~e 232 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEE 232 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHH
Confidence 99999999999999999999999999999999999988653 7899999999999998 89999999999999999999
Q ss_pred HHhcCCChHHHHHH
Q 000755 1276 LLENKSSSFAQLVA 1289 (1300)
Q Consensus 1276 l~~~~~~~f~~l~~ 1289 (1300)
+.+.++...++++.
T Consensus 233 l~~sd~P~v~qf~~ 246 (263)
T COG1127 233 LLASDDPWVRQFFN 246 (263)
T ss_pred HHhCCCHHHHHHhc
Confidence 99887766666554
No 117
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-42 Score=383.29 Aligned_cols=231 Identities=32% Similarity=0.518 Sum_probs=209.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|++...++++|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 47899999997543359999999999999999999999999999999999999999999999999988777788889999
Q ss_pred EcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000755 1135 IPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVL 1213 (1300)
Q Consensus 1135 vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iL 1213 (1300)
+||++.+|+.|+++|+.... ....+++.+.++..++.+.+..++.++++..+..+.+||+|||||++|||||+++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997542 34556677788888999999999889999888899999999999999999999999999
Q ss_pred EEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHH
Q 000755 1214 VLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQ 1286 (1300)
Q Consensus 1214 lLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~ 1286 (1300)
||||||++||+.+.+.+.+.|++..++.|||++||+++.+..||+|++|++|++++.|+++++.++ .+.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhh
Confidence 999999999999999999999988778999999999999988999999999999999999999864 444543
No 118
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=379.28 Aligned_cols=209 Identities=29% Similarity=0.439 Sum_probs=182.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|+.. + ||+||||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++..... +.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 69999999999865 4 9999999999999999999999999999999999999999999999987754321 46899
Q ss_pred EEcCCCC---CCcccHHHhcCCCC-----------CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1134 IIPQDPT---MFEGTVRNNLDPLE-----------EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1134 ~vpQ~~~---lf~gTvr~Nl~~~~-----------~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
||||... -|+-||+|-+.... ..+.+++.++|+++++.++..+. + ..|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~-------i----~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQ-------I----GELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCc-------c----cccCcHHHHH
Confidence 9999653 47889999875421 11247799999999998875543 2 4589999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
+.|||||+++|++|+|||||+|+|+.++..|.+.|++..+ +|||++|+||++.+.+ +|+|+.| ++++...|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhcc
Confidence 9999999999999999999999999999999999998764 8999999999999988 9999999 56678899999998
Q ss_pred hc
Q 000755 1278 EN 1279 (1300)
Q Consensus 1278 ~~ 1279 (1300)
+.
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 119
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=362.52 Aligned_cols=203 Identities=32% Similarity=0.444 Sum_probs=177.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
-|+++|++.+|. +..+|+|||++|++||.++|||||||||||||+||.|+.+|++|+|.++|.
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999996 467999999999999999999999999999999999999999999999993
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC----CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP----MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~----~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
+|+|+|+..+|. -|+.|||..+.- .+ +++-.+.++..+|.+..+..| ..|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 579999999985 699999998731 22 334456677888887777666 5799999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
||||.-+|+++|+|||||||||+....+.+-...-...|.|.|+|||.+.|... ||||+.|++|+|++.|+++++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999998876433333468899999999999887 9999999999999999999998764
Q ss_pred c
Q 000755 832 T 832 (1300)
Q Consensus 832 ~ 832 (1300)
.
T Consensus 228 ~ 228 (240)
T COG1126 228 K 228 (240)
T ss_pred C
Confidence 3
No 120
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-42 Score=379.57 Aligned_cols=226 Identities=37% Similarity=0.596 Sum_probs=207.5
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
|.|+++|++++|+.. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 468999999999642 3599999999999999999999999999999999999999999999999999887778888999
Q ss_pred EEEcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1133 SIIPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1133 ~~vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
+|+||++.+|++|+++|+.... ...++++.++++.+++.+.+..+|.|+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345567888899999999999999899999989999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1212 VLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
+|||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999987668999999999999988999999999999999998888754
No 121
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-41 Score=379.54 Aligned_cols=233 Identities=35% Similarity=0.576 Sum_probs=212.0
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|+++ ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643 358999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000755 1135 IPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVL 1213 (1300)
Q Consensus 1135 vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iL 1213 (1300)
+||++.+|++|+++|+... ...+++++.++++.+++.+.+..++.++++.+...+.+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999754 234566788889999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHHH
Q 000755 1214 VLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVA 1289 (1300)
Q Consensus 1214 lLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~~ 1289 (1300)
||||||++||+.+.+.+.+.|++..++.|||++||+++.+..||++++|++|++++.|+++++.++ .+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHh
Confidence 999999999999999999999987667899999999999988999999999999999999998864 566666554
No 122
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7e-42 Score=387.78 Aligned_cols=222 Identities=27% Similarity=0.356 Sum_probs=201.6
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.|+++|++++|+.+ ..++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 58999999999632 4579999999999999999999999999999999999998 799999988 36
Q ss_pred EEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 000755 683 AYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADI 762 (1300)
Q Consensus 683 ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~i 762 (1300)
+||||+|++|++|+++|+....++++++++++++.+++...+..+|.+++|.++|+|.+||||||||++||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999974445677889999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHHHHH
Q 000755 763 YLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVLVGA 840 (1300)
Q Consensus 763 llLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 840 (1300)
+||||||++||+++.+.+. +.+....+++|+|+|||+++++..||+|++|++|++++.|+++++++....|..++..
T Consensus 160 lllDEpts~LD~~~~~~l~-~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIR-KTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred EEEECccccCCHHHHHHHH-HHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 9999999999999988775 4555555689999999999998889999999999999999999999977666666543
No 123
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.1e-42 Score=372.85 Aligned_cols=207 Identities=60% Similarity=1.006 Sum_probs=186.9
Q ss_pred CCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH
Q 000755 1049 WPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL 1128 (1300)
Q Consensus 1049 wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l 1128 (1300)
||..+.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+..++
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 88899999999999997543469999999999999999999999999999999999999999999999999988888888
Q ss_pred hcccEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1129 RSRLSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
|++++|+||+|.+|++|+++|+.......++++.++++ +......||+||+||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 89999999999999999999997655455555544443 234567899999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecCh
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~ 1273 (1300)
+|+++||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999987678999999999999988999999999999998864
No 124
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.8e-42 Score=398.21 Aligned_cols=219 Identities=26% Similarity=0.424 Sum_probs=191.3
Q ss_pred EEEEeeeeeeCCC--CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---Hh
Q 000755 1055 VDILNLQVRYAPH--LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---LR 1129 (1300)
Q Consensus 1055 i~~~~v~~~y~~~--~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---lr 1129 (1300)
|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ .|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999998877654 47
Q ss_pred cccEEEcCCCCCCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1130 SRLSIIPQDPTMFE-GTVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~-gTvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
++|+|+||++.+|. .|+++|+.+. ...+ ++++.++++.+++.+...+.| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 79999999999986 5999999632 1122 234678899999877654433 568999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||+.+|++|+|||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998653 6899999999999987 99999999999999999999987
Q ss_pred cCCChH
Q 000755 1279 NKSSSF 1284 (1300)
Q Consensus 1279 ~~~~~f 1284 (1300)
++...+
T Consensus 231 ~p~~~~ 236 (343)
T TIGR02314 231 HPKTPL 236 (343)
T ss_pred CCCcHH
Confidence 665444
No 125
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-41 Score=374.15 Aligned_cols=219 Identities=34% Similarity=0.527 Sum_probs=199.2
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
|.++++|++++|+....++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999975334599999999999999999999999999999999999999999999999998877777778899
Q ss_pred EEEcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1133 SIIPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1133 ~~vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
+|+||++.+|..|+++|+.... ....+++.++++.+++.+.+...|.++++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999998889999997542 234567788899999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEec
Q 000755 1212 VLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g 1271 (1300)
+|||||||++||+.+...+.+.|++..+++|||++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999987669999999999998754
No 126
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.1e-41 Score=377.93 Aligned_cols=233 Identities=34% Similarity=0.611 Sum_probs=208.5
Q ss_pred EEEEeeeeeeCCC-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1055 VDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1055 i~~~~v~~~y~~~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
++++|++++|++. ..++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+....+++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999653 246999999999999999999999999999999999999999999999999998777777788899
Q ss_pred EEcCCCCCCcccHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000755 1134 IIPQDPTMFEGTVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKV 1212 (1300)
Q Consensus 1134 ~vpQ~~~lf~gTvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~i 1212 (1300)
|+||++.+|+.|+++|+... .....+++.+.++..++.+++..+|.++++.......+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999754 23345667778888899898899999999999889999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHH
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~ 1288 (1300)
|||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|+++++.+. .+..++++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHh
Confidence 9999999999999999999999987667899999999999988999999999999999999988764 34444443
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=387.43 Aligned_cols=217 Identities=26% Similarity=0.425 Sum_probs=197.0
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++||+++|++.. +++|+|++|+.||.++|+||||||||||+++|+|+.+|++|+|.|||.|++++++++ ++|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 689999999998753 899999999999999999999999999999999999999999999999999998876 6899
Q ss_pred EEcCCCCCCcc-cHHHhcCCCCC-------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLEE-------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~~-------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
+|+|+..||+. ||++|+.+.-. -.++++.++++.+++.+.++++|. .||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999976 99999975321 225667889999999888888775 569999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCC
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSS 1282 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~ 1282 (1300)
|.++|++++||||.|+||...+..+...|++..+ +.|+|.||||..+++. +|||.||++|+|.+.|+|.++.+++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999999888887543 5899999999999988 999999999999999999999998887
Q ss_pred hHH
Q 000755 1283 SFA 1285 (1300)
Q Consensus 1283 ~f~ 1285 (1300)
.|-
T Consensus 228 ~fV 230 (338)
T COG3839 228 LFV 230 (338)
T ss_pred hhh
Confidence 764
No 128
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=361.60 Aligned_cols=226 Identities=28% Similarity=0.413 Sum_probs=190.4
Q ss_pred eEEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC-HHHHhc
Q 000755 1054 EVDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG-LHDLRS 1130 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~-~~~lr~ 1130 (1300)
.++++|+++.|+.+. .++|+||||+|.+||.+||||+||||||||.++|+|+.+|++|+|.+||.++.... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997652 24999999999999999999999999999999999999999999999998775543 335677
Q ss_pred ccEEEcCCCCC-C-c-ccHHHhcC-CCCC----CCHHHHHHHHHHcCCcHHH-HhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1131 RLSIIPQDPTM-F-E-GTVRNNLD-PLEE----YKDEEIWEALDKCQLGDEV-RNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1131 ~i~~vpQ~~~l-f-~-gTvr~Nl~-~~~~----~~d~~i~~~l~~~~l~~~i-~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
.+.+|+|||.- + + -||++-|. |... ...++++++|+.+||.+.. .+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 89999999962 2 2 37777763 3221 2345699999999996543 4444 457999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||.-+|++||||||||+||....+.|.+.+.+..+ +-|.|+|||++..+.. ||||+||++|+++|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999988765 4599999999999998 99999999999999999999998
Q ss_pred cCCChHHHHHHH
Q 000755 1279 NKSSSFAQLVAE 1290 (1300)
Q Consensus 1279 ~~~~~f~~l~~~ 1290 (1300)
.+...|.+...+
T Consensus 232 ~~~h~ytr~Ll~ 243 (252)
T COG1124 232 HPSHPYTRELLE 243 (252)
T ss_pred CCccHHHHHHHH
Confidence 755566554443
No 129
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.1e-41 Score=375.23 Aligned_cols=211 Identities=29% Similarity=0.521 Sum_probs=184.3
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCC-----CCCcceEEECCeecCCCC--HHH
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIV-----EPTAGEIVIDGINISSIG--LHD 1127 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~-----~p~~G~I~idg~di~~i~--~~~ 1127 (1300)
|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++...+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999753 5999999999999999999999999999999999999 999999999999998776 566
Q ss_pred HhcccEEEcCCCCCCcccHHHhcCCCC---CC-----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1128 LRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
+|++++|+||++.+|..|+++|+.+.. .. .++++.++++.+++.+...+.+. +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 788999999999988779999986421 11 13456778888888765443221 46799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987655899999999999887 999999999999999988764
No 130
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-41 Score=375.97 Aligned_cols=212 Identities=27% Similarity=0.425 Sum_probs=184.6
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH---HHHhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL---HDLRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~---~~lr~~ 1131 (1300)
|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+.
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 478999999964 359999999999999999999999999999999999999999999999999887664 457888
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCL 1202 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~L 1202 (1300)
++|+||++.+|.. |+++|+... ...+ ++++.++++.+++.+...+. ..+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLY-----------PAELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHH
Confidence 9999999999886 999998642 1122 23456778888876544332 35789999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1203 GRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1203 ARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998653 6899999999999987 999999999999999999998754
No 131
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=370.79 Aligned_cols=215 Identities=28% Similarity=0.459 Sum_probs=194.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecC-CCCHHHHhccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINIS-SIGLHDLRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~-~i~~~~lr~~i 1132 (1300)
.++++|++++|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58899999999877 67999999999999999999999999999999999999999999999999988 47889999999
Q ss_pred EEEcCCC--CCCcccHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDP--TMFEGTVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
|+|+|+| .+|..||.+.+.+.. ..+. +.+.++|+.+++.++..+. ..+||||||||++||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceeeHHhh
Confidence 9999999 689999999987642 2333 3467789999987764443 357899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
.+|..+|++||||||||+||+...+.+.+.+++..+ +.|+|++|||++.+.. ||||++|++|+++.+|+|++++++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 999999999999999999999999999999999764 4799999999999998 9999999999999999999998753
No 132
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-41 Score=346.10 Aligned_cols=207 Identities=25% Similarity=0.355 Sum_probs=186.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---Hhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---LRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---lr~~ 1131 (1300)
|+|+||+++|+.. +++|+||||+|++||.+-|+||||||||||+++|++..+|++|+|.++|.|++.+..++ +|++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999887 77999999999999999999999999999999999999999999999999999887665 7999
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
||+|+||..|... ||.||+.+. .... .+++.++|+.+||.+....+|. .||||||||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999988765 999998642 1222 3456789999999998888875 5699999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecCh
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~ 1273 (1300)
||+..+|++||-||||.+||+++...|++.+.+.. .|.||++.||+.+.+.+ --|++.+++|+++....+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999998864 48999999999999988 578999999999987653
No 133
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-41 Score=387.92 Aligned_cols=219 Identities=25% Similarity=0.377 Sum_probs=185.6
Q ss_pred CCceEEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCC----
Q 000755 1051 THGEVDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSI---- 1123 (1300)
Q Consensus 1051 ~~g~i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i---- 1123 (1300)
....|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 345699999999997432 3599999999999999999999999999999999999999999999999998653
Q ss_pred ------------CHHHHhcccEEEcCCC--CCCcccHHHhcCCCC---CCCHHH----HHHHHHHcCCcHHHHhhcCCCc
Q 000755 1124 ------------GLHDLRSRLSIIPQDP--TMFEGTVRNNLDPLE---EYKDEE----IWEALDKCQLGDEVRNKEGKLD 1182 (1300)
Q Consensus 1124 ------------~~~~lr~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d~~----i~~~l~~~~l~~~i~~~~~gLd 1182 (1300)
....+|++++|++|+| .+|+.|+++|+.+.. ..++++ +.++++.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------- 167 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD---------- 167 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------
Confidence 3456889999999998 688899999996431 223322 344555555531
Q ss_pred cccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEE
Q 000755 1183 SRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVL 1260 (1300)
Q Consensus 1183 t~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~ 1260 (1300)
......+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||||+
T Consensus 168 ~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~ 247 (320)
T PRK13631 168 SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVI 247 (320)
T ss_pred hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEE
Confidence 22445677899999999999999999999999999999999999999999998754 47899999999998865 99999
Q ss_pred EEeCCEEEEecChhhHHhc
Q 000755 1261 LLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1261 vl~~G~i~e~g~~~~l~~~ 1279 (1300)
+|++|++++.|++++++++
T Consensus 248 vl~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 248 VMDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EEECCEEEEeCCHHHHhcC
Confidence 9999999999999988653
No 134
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=371.32 Aligned_cols=222 Identities=30% Similarity=0.508 Sum_probs=193.5
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEcCCCCCCcccHHHhcCCCC---CCCHHHHHHHHHHcCCcH-HHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1134 IIPQDPTMFEGTVRNNLDPLE---EYKDEEIWEALDKCQLGD-EVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1134 ~vpQ~~~lf~gTvr~Nl~~~~---~~~d~~i~~~l~~~~l~~-~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
|+||++.+|+.|+++|+.... ...++++.++++.+++.+ ... .....||||||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYAT-----------RDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999899999987432 122456777888888752 222 24567999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCChHHH
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSSSFAQ 1286 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~ 1286 (1300)
|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|++++++.++...+.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999999864 37899999999999887 9999999999999999999998765545554
Q ss_pred HH
Q 000755 1287 LV 1288 (1300)
Q Consensus 1287 l~ 1288 (1300)
.+
T Consensus 230 ~~ 231 (241)
T PRK14250 230 LF 231 (241)
T ss_pred HH
Confidence 44
No 135
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=372.48 Aligned_cols=219 Identities=24% Similarity=0.415 Sum_probs=192.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC---CCcceEEECCeecCCCCHHHHhc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE---PTAGEIVIDGINISSIGLHDLRS 1130 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~---p~~G~I~idg~di~~i~~~~lr~ 1130 (1300)
.|+++|++++|+. +++|+|+||++++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...+....|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999974 369999999999999999999999999999999999985 69999999999998888778888
Q ss_pred ccEEEcCCCCCCcccHHHhcCCCC---C------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1131 RLSIIPQDPTMFEGTVRNNLDPLE---E------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~gTvr~Nl~~~~---~------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
+++|+||++.+|..|+++|+.+.. . ..++++.++++.+++.+++... ..+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996431 1 1123567788999886654332 33456789999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
|||||+++|++|+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987668999999999999876 9999999999999999999998654
Q ss_pred C
Q 000755 1281 S 1281 (1300)
Q Consensus 1281 ~ 1281 (1300)
.
T Consensus 233 ~ 233 (246)
T PRK14269 233 K 233 (246)
T ss_pred C
Confidence 3
No 136
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-41 Score=354.56 Aligned_cols=212 Identities=26% Similarity=0.421 Sum_probs=188.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC---HHHHhc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG---LHDLRS 1130 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~---~~~lr~ 1130 (1300)
.|+++||+..|+++ ..+|+||||+|++||.|+||||||||||||+++|.|+.+|++|+|.++|.++..+. ++++|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 58999999999744 46999999999999999999999999999999999999999999999999998887 556788
Q ss_pred ccEEEcCCCCCCcc-cHHHhcCC------------CCCCCH---HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCCh
Q 000755 1131 RLSIIPQDPTMFEG-TVRNNLDP------------LEEYKD---EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSM 1194 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~g-Tvr~Nl~~------------~~~~~d---~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSg 1194 (1300)
++|+|+|++.|.+. ||.+|+.. ++.++. ....++|+++|+.+...+.. ++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra-----------~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA-----------STLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh-----------ccCCc
Confidence 99999999998765 99999742 233333 34677899999988765543 56899
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1195 GQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1195 GqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
||+|||+|||||.++|+|++-|||+|+|||.+.+.+++.|++.. .+.|||+.-|.++.+.. ||||+-|++|+|+.+|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999865 46899999999999988 9999999999999999
Q ss_pred ChhhHH
Q 000755 1272 SPTKLL 1277 (1300)
Q Consensus 1272 ~~~~l~ 1277 (1300)
++.++-
T Consensus 231 ~~~el~ 236 (258)
T COG3638 231 PASELT 236 (258)
T ss_pred Chhhhh
Confidence 999964
No 137
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-40 Score=357.81 Aligned_cols=204 Identities=28% Similarity=0.414 Sum_probs=176.3
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---H-
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---L- 1128 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---l- 1128 (1300)
++++||++.|..+. ..+|+++||+|++||.++|+||||||||||+++|.|+..|++|.|.++|.|+..++.++ +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996442 36899999999999999999999999999999999999999999999999999988544 3
Q ss_pred hcccEEEcCCCCCCcc-cHHHhcCC---CCCC----CHHHHHHHHHHcCCcHHHH-hhcCCCccccccCCCCCChhHHHH
Q 000755 1129 RSRLSIIPQDPTMFEG-TVRNNLDP---LEEY----KDEEIWEALDKCQLGDEVR-NKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf~g-Tvr~Nl~~---~~~~----~d~~i~~~l~~~~l~~~i~-~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
|++||||+|+..|++. |++||+.. .... ..+.+.+.++.+++.+... +.| ..||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 4579999999999876 99999862 2222 2345667788888876554 333 5689999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhccCEEEEEeCCEEEE
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e 1269 (1300)
+||||||+.+|+|++.||||.+||.++.+.|.+.+++.. .++|||+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999875 3689999999999999999999999999543
No 138
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=357.94 Aligned_cols=219 Identities=26% Similarity=0.378 Sum_probs=185.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++++++.|+. ..||+|+||+|++||+++|+||||||||||+++++|+.+|++|+|.++|.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999987 4699999999999999999999999999999999999999999999999887432 45799
Q ss_pred EEcCCCCCCcc-cHHHhcCCCCCC-------CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLEEY-------KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~~~-------~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
||+|++.||+- ||++|+.+.-+. ..+.+.+.|+.+||.++-.+.|. .||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 99999999987 999998643221 23457889999999998887774 569999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeC--CEEE---Eec--Chhh
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSH--GIIE---EYD--SPTK 1275 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~--G~i~---e~g--~~~~ 1275 (1300)
|+.+|+||+||||+++||..|+..+|+.+.+.. .++||++|||++++... +|||+||.+ |+|. +.+ .|.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR- 223 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPR- 223 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCc-
Confidence 999999999999999999999999999988754 35899999999999877 999999999 5553 222 233
Q ss_pred HHhcCCChHHHHHHHHhh
Q 000755 1276 LLENKSSSFAQLVAEYTQ 1293 (1300)
Q Consensus 1276 l~~~~~~~f~~l~~~~~~ 1293 (1300)
...+..|..+.++-+.
T Consensus 224 --~~~~~~f~~l~~~i~~ 239 (248)
T COG1116 224 --IRGDPEFLELREELLE 239 (248)
T ss_pred --cccChHHHHHHHHHHH
Confidence 2334567777665543
No 139
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=388.12 Aligned_cols=218 Identities=22% Similarity=0.387 Sum_probs=191.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|+++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.+||.++..++.+ +++++
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999422 3599999999999999999999999999999999999999999999999999887754 46899
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
|+||++.+|+. ||++|+.+.. ..+ ++++.++++.+++.+...+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 9999997431 122 245678899999877665554 4689999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCC
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSS 1282 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~ 1282 (1300)
|+++|++|+|||||++||+.+.+.+.+.|++..+ +.|+|+|||+++++.. ||+|++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999988653 6899999999999887 999999999999999999999987765
Q ss_pred hHH
Q 000755 1283 SFA 1285 (1300)
Q Consensus 1283 ~f~ 1285 (1300)
.|.
T Consensus 229 ~~~ 231 (356)
T PRK11650 229 TFV 231 (356)
T ss_pred HHH
Confidence 553
No 140
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=387.26 Aligned_cols=220 Identities=25% Similarity=0.406 Sum_probs=189.6
Q ss_pred EEEEeeeeeeCC--CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---Hh
Q 000755 1055 VDILNLQVRYAP--HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---LR 1129 (1300)
Q Consensus 1055 i~~~~v~~~y~~--~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---lr 1129 (1300)
|+++|++++|+. ...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999998877654 47
Q ss_pred cccEEEcCCCCCCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1130 SRLSIIPQDPTMFE-GTVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~-gTvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
++++|+||++.+|. .|+++|+... ...+ ++++.++++.+++.+...+ ...+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADR-----------YPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 88999999999886 5999998642 1222 2346677888887655433 33578999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998653 6899999999999987 99999999999999999999987
Q ss_pred cCCChHH
Q 000755 1279 NKSSSFA 1285 (1300)
Q Consensus 1279 ~~~~~f~ 1285 (1300)
++...+.
T Consensus 231 ~~~~~~~ 237 (343)
T PRK11153 231 HPKHPLT 237 (343)
T ss_pred CCCcHHH
Confidence 6544443
No 141
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.7e-40 Score=374.96 Aligned_cols=395 Identities=26% Similarity=0.378 Sum_probs=264.2
Q ss_pred EeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEE------------------------------EcCeEEEEecCCcC
Q 000755 642 VFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLK------------------------------LCGTKAYVAQSPWI 691 (1300)
Q Consensus 642 i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~------------------------------~~g~~ayv~Q~~~l 691 (1300)
.++|+.++|+|+||-||||-++.|+|++.|.=|.-. +--++-||.--|-.
T Consensus 97 pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~~pp~wdeVi~~FrGtELq~YF~~l~~g~~r~v~K~QYVd~iPk~ 176 (591)
T COG1245 97 PRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYEDPPSWDEVIKRFRGTELQNYFKKLYEGELRAVHKPQYVDLIPKV 176 (591)
T ss_pred CCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCCCCCCHHHHHHHhhhhHHHHHHHHHHcCCcceecchHHHHHHHHH
Confidence 468999999999999999999999999998766532 11122355445666
Q ss_pred CCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCC
Q 000755 692 QSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSA 771 (1300)
Q Consensus 692 ~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~sa 771 (1300)
..|+++|=+.--. ...+++++++..+|++- ++....+||||+-||+|||-|+.+++|+|++|||+|-
T Consensus 177 ~KG~v~elLk~~d--e~g~~devve~l~L~nv-----------l~r~v~~LSGGELQr~aIaa~l~rdADvY~FDEpsSy 243 (591)
T COG1245 177 VKGKVGELLKKVD--ERGKFDEVVERLGLENV-----------LDRDVSELSGGELQRVAIAAALLRDADVYFFDEPSSY 243 (591)
T ss_pred hcchHHHHHHhhh--hcCcHHHHHHHhcchhh-----------hhhhhhhcCchHHHHHHHHHHHhccCCEEEEcCCccc
Confidence 7788877554211 11355666666665543 3456678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcC-CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCchHHHHHHHHHHHhhhhc
Q 000755 772 VDAHTGSHLFKEVLLGLLR-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNSGTDFMVLVGAHQQALSALD 849 (1300)
Q Consensus 772 LD~~t~~~i~~~~~~~~l~-~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~ 849 (1300)
||...+-.. .+.++.+.+ +|+||+|.|++..|.. +|.|.++-.- .|-|--...
T Consensus 244 LDi~qRl~~-ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~YG~----pg~YGvvs~-------------------- 298 (591)
T COG1245 244 LDIRQRLNA-ARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILYGE----PGVYGVVSK-------------------- 298 (591)
T ss_pred ccHHHHHHH-HHHHHHHhccCCeEEEEechHHHHHHhhheeEEEecC----CccceEecc--------------------
Confidence 999876655 345666766 6999999999999987 8988877421 011100000
Q ss_pred ccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHh
Q 000755 850 SIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSF 929 (1300)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf 929 (1300)
|-| .| .-+.+.+
T Consensus 299 ----------------------------p~s-----------------vr--------------~gIN~yL--------- 310 (591)
T COG1245 299 ----------------------------PKS-----------------VR--------------VGINEYL--------- 310 (591)
T ss_pred ----------------------------chH-----------------HH--------------HHHHHHH---------
Confidence 000 00 0000000
Q ss_pred cchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHH
Q 000755 930 DQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWV 1009 (1300)
Q Consensus 930 ~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~ 1009 (1300)
.|.+.
T Consensus 311 ------------------------------------------------------~Gyl~--------------------- 315 (591)
T COG1245 311 ------------------------------------------------------KGYLP--------------------- 315 (591)
T ss_pred ------------------------------------------------------hccCc---------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCCC-CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEE
Q 000755 1010 IWNLCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPT-HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIV 1088 (1300)
Q Consensus 1010 ~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~~~~wp~-~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIv 1088 (1300)
-|| +..-+|+- ..+.. ++..-.. .-.++..++++.|++- .|+==.=+|+.||++|++
T Consensus 316 ------~EN-----------~R~R~~~I-~F~~~-~~~~~~~~~~lv~y~~~~k~~g~F---~L~V~~G~i~~gEvigil 373 (591)
T COG1245 316 ------EEN-----------VRFRPEEI-EFEEK-PPRDDKARDTLVEYPDLKKTYGDF---KLEVEEGEIYDGEVIGIL 373 (591)
T ss_pred ------hhc-----------ccccccce-eeecc-CcccccccceeeecchheeecCce---EEEecCCeeecceEEEEE
Confidence 000 01111111 00111 1111111 2234555566666531 222222346678999999
Q ss_pred CCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCC-CCCcccHHHhcCCCCC--CCHHHH-HHH
Q 000755 1089 GRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDP-TMFEGTVRNNLDPLEE--YKDEEI-WEA 1164 (1300)
Q Consensus 1089 G~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~-~lf~gTvr~Nl~~~~~--~~d~~i-~~~ 1164 (1300)
||||-||||++++|+|.++|++|. ..+ -+++|=||-- .-|+|||++-+.-... +.+.-. .++
T Consensus 374 GpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~~~~~s~~~~ei 439 (591)
T COG1245 374 GPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRSAFGSSYFKTEI 439 (591)
T ss_pred CCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhhhcccchhHHhh
Confidence 999999999999999999999997 222 2588889853 2389999988742111 211111 123
Q ss_pred HHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcE
Q 000755 1165 LDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCT 1242 (1300)
Q Consensus 1165 l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~T 1242 (1300)
.+..++.+ .+.....+|||||.||+++|-||.+++++.+||||+|.||.+.+-.+-++||+.. .++|
T Consensus 440 ~~pl~l~~-----------i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR~~e~~~kt 508 (591)
T COG1245 440 VKPLNLED-----------LLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRRFIENNEKT 508 (591)
T ss_pred cCccchHH-----------HHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHHHHhhcCce
Confidence 34444433 3334456799999999999999999999999999999999999999999999854 4689
Q ss_pred EEEEeCChhhhhc-cCEEEEEeC
Q 000755 1243 VITIAHRITSVID-SDMVLLLSH 1264 (1300)
Q Consensus 1243 vi~iaHrl~~i~~-~D~v~vl~~ 1264 (1300)
.++|-||+-.+.. +||++|.+.
T Consensus 509 a~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 509 ALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred EEEEecceehhhhhhceEEEEec
Confidence 9999999998877 999999964
No 142
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=386.46 Aligned_cols=218 Identities=25% Similarity=0.399 Sum_probs=192.0
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
..|+++|++++|+. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+.+ ++++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999975 3589999999999999999999999999999999999999999999999999876643 5789
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
+|++|++.+|+. ||++|+.+.. ..+ ++++.++++.+++.++..+. ...||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 9999997421 122 34567888888887654443 3578999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCC
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKS 1281 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~ 1281 (1300)
||+++|++|+|||||++||+.+.+.+.+.|++..+ +.|+|+|||+.+++.. ||||++|++|++++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999988654 6899999999999977 99999999999999999999998877
Q ss_pred ChHH
Q 000755 1282 SSFA 1285 (1300)
Q Consensus 1282 ~~f~ 1285 (1300)
..|.
T Consensus 230 ~~~~ 233 (351)
T PRK11432 230 SRFM 233 (351)
T ss_pred chHH
Confidence 6553
No 143
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=381.50 Aligned_cols=219 Identities=24% Similarity=0.395 Sum_probs=197.0
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
..|+++||+++|++ ..+++|+||+|++||+++++||||||||||+++|+|+..|++|+|.+||.|+..+++++ +.|
T Consensus 4 ~~l~i~~v~k~yg~--~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~k--R~i 79 (352)
T COG3842 4 PALEIRNVSKSFGD--FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEK--RPI 79 (352)
T ss_pred ceEEEEeeeeecCC--eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhh--ccc
Confidence 46999999999984 46999999999999999999999999999999999999999999999999999988774 689
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCC----CCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEE----YKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~----~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+|+..||+. ||++|+.+.-. ..+ +.+.++|+.+++.++-.+.|. .||||||||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 999999999976 99999875321 232 367889999999988777764 5699999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
|||..+|++|+||||.|+||..-+..++.-+++.. .+.|.|+||||-++... +|||.||++|+|...|+|+|+...+
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999999888754 37899999999999887 9999999999999999999999988
Q ss_pred CChHHH
Q 000755 1281 SSSFAQ 1286 (1300)
Q Consensus 1281 ~~~f~~ 1286 (1300)
.+.|-.
T Consensus 229 ~~~fVA 234 (352)
T COG3842 229 ATRFVA 234 (352)
T ss_pred chHHHH
Confidence 877743
No 144
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-40 Score=370.74 Aligned_cols=222 Identities=27% Similarity=0.443 Sum_probs=191.5
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--CC
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS--IG 1124 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~--i~ 1124 (1300)
.+.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999975 359999999999999999999999999999999999986 589999999999853 34
Q ss_pred HHHHhcccEEEcCCCCCCcccHHHhcCCCC----CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhH
Q 000755 1125 LHDLRSRLSIIPQDPTMFEGTVRNNLDPLE----EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1125 ~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~----~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
...+|++++|+||++.+|+.|+++|+.... ..+ +++++++++.+++.+.+.. .......+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHHH
Confidence 567788999999999999899999986421 122 2457778888887543322 2344567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999976 99999999999999999999
Q ss_pred HHhcCCC
Q 000755 1276 LLENKSS 1282 (1300)
Q Consensus 1276 l~~~~~~ 1282 (1300)
+.+.+..
T Consensus 242 ~~~~~~~ 248 (260)
T PRK10744 242 IFTKPAK 248 (260)
T ss_pred HHhCCCc
Confidence 9865433
No 145
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=370.61 Aligned_cols=219 Identities=26% Similarity=0.438 Sum_probs=189.0
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS--IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~--i~~~ 1126 (1300)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. ....
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999974 359999999999999999999999999999999999975 689999999999864 3445
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCC----CC----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPL----EE----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~----~~----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|++++|+||++.+|..|+++|+.+. .. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 678899999999999988999998642 11 113456778888888654322 233456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999976 9999999999999999999998
Q ss_pred hcCC
Q 000755 1278 ENKS 1281 (1300)
Q Consensus 1278 ~~~~ 1281 (1300)
+.+.
T Consensus 237 ~~~~ 240 (253)
T PRK14242 237 TRPR 240 (253)
T ss_pred cCCC
Confidence 6543
No 146
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=376.89 Aligned_cols=215 Identities=27% Similarity=0.416 Sum_probs=189.2
Q ss_pred eEEEEeeeeeeCCC-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1054 EVDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
.++++|++++|+.. .+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCCC--CCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPT--MFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~--lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
+|+||+|. ++..||++|+.+.. ..+ ++.+.++++.+++.++....+ .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 99999983 55679999996431 122 245778899998876554433 57899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998653 7899999999999977999999999999999999998754
No 147
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=3e-40 Score=365.75 Aligned_cols=217 Identities=32% Similarity=0.488 Sum_probs=194.6
Q ss_pred CCceEEEEeeeeeeCCC-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHh
Q 000755 1051 THGEVDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1051 ~~g~i~~~~v~~~y~~~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr 1129 (1300)
..+.++++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+....+
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999753 23599999999999999999999999999999999999999999999999998877777778
Q ss_pred cccEEEcCCCCCCcccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1130 SRLSIIPQDPTMFEGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
++++|+||++.+|+.|+++|+.+.. .....++++..++.++.+++..++.|+++.+.....+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 8999999999999999999997532 233445566667777888888888789888889999999999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEE
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGII 1267 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i 1267 (1300)
+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987667899999999999988999999999974
No 148
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.4e-40 Score=364.95 Aligned_cols=210 Identities=26% Similarity=0.354 Sum_probs=182.0
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++||+++|++...++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++... ...++++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 578999999975324699999999999999999999999999999999999999999999999998754 3567788999
Q ss_pred EcCCCCCC-cccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMF-EGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf-~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+| ..|+++|+.... ... ++++.++++.+++.+.... ...+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANK-----------RARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------hhhhCCHHHHHHHHHHHHH
Confidence 99999988 469999986321 112 2456778888887654332 2357999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999987667999999999999987 999999999999999998765
No 149
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=377.81 Aligned_cols=216 Identities=27% Similarity=0.469 Sum_probs=185.4
Q ss_pred eEEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC--HHHH
Q 000755 1054 EVDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG--LHDL 1128 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~--~~~l 1128 (1300)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999997532 36999999999999999999999999999999999999999999999999997643 4577
Q ss_pred hcccEEEcCCC--CCCcccHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1129 RSRLSIIPQDP--TMFEGTVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1129 r~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
|++++|+||+| .+|+.|+++|+.+.. ..++ +.+.++++.+++.. ..........||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHHH
Confidence 88999999998 467889999996421 2233 34667888888751 011233456899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREV 232 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998653 6899999999999876 999999999999999999998
Q ss_pred Hh
Q 000755 1277 LE 1278 (1300)
Q Consensus 1277 ~~ 1278 (1300)
++
T Consensus 233 ~~ 234 (287)
T PRK13637 233 FK 234 (287)
T ss_pred Hh
Confidence 75
No 150
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.4e-40 Score=386.48 Aligned_cols=218 Identities=25% Similarity=0.387 Sum_probs=191.7
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|+. ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5899999999975 3589999999999999999999999999999999999999999999999999877654 57899
Q ss_pred EEcCCCCCCc-ccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFE-GTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~-gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
|+||++.+|+ .||++|+.+.. ..+ ++++.++++.+++.+...+. ..+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~-----------~~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKY-----------PGQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 9999999996 59999996421 122 34577788888887655444 35789999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCC
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSS 1282 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~ 1282 (1300)
|+++|++|+|||||++||..+++.+.+.|++..+ +.|+|+|||+++++.. ||||++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999988653 6899999999999877 999999999999999999999988776
Q ss_pred hHHH
Q 000755 1283 SFAQ 1286 (1300)
Q Consensus 1283 ~f~~ 1286 (1300)
.|..
T Consensus 229 ~~~a 232 (353)
T TIGR03265 229 PFVA 232 (353)
T ss_pred HHHH
Confidence 6643
No 151
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6e-40 Score=368.29 Aligned_cols=221 Identities=27% Similarity=0.469 Sum_probs=189.9
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----cceEEECCeecCCC--CHHH
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT-----AGEIVIDGINISSI--GLHD 1127 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~-----~G~I~idg~di~~i--~~~~ 1127 (1300)
++++|++++|++. .+++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999753 5899999999999999999999999999999999999998 99999999998753 3456
Q ss_pred HhcccEEEcCCCCCCcccHHHhcCCC---CC-CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1128 LRSRLSIIPQDPTMFEGTVRNNLDPL---EE-YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~-~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
.|++++|+||++.+|..|+++|+... .. .+ ++++.++++.+++.+.+.. .......+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD-------RLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh-------HhhCCcccCCHHHHHH
Confidence 78899999999999889999998632 11 11 2456778888888643321 1233456899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
++|||||+++|+++||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987666899999999999977 99999999999999999999987
Q ss_pred cCCChH
Q 000755 1279 NKSSSF 1284 (1300)
Q Consensus 1279 ~~~~~f 1284 (1300)
++...+
T Consensus 233 ~~~~~~ 238 (247)
T TIGR00972 233 NPKEKR 238 (247)
T ss_pred CCCChH
Confidence 655444
No 152
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-40 Score=366.90 Aligned_cols=213 Identities=24% Similarity=0.394 Sum_probs=183.1
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 3789999999975 359999999999999999999999999999999999999999999999999876543 357899
Q ss_pred EEcCCCCCCc-ccHHHhcCCCCC---C----C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1134 IIPQDPTMFE-GTVRNNLDPLEE---Y----K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1134 ~vpQ~~~lf~-gTvr~Nl~~~~~---~----~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
|+||+|.+|. .|+++|+.+... . . ++++.++++.+++.+...+ ...+||+|||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADR-----------YPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 9999999886 599999964311 1 1 2345667888877554333 33578999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998643 6899999999999876 99999999999999999999986
Q ss_pred cCC
Q 000755 1279 NKS 1281 (1300)
Q Consensus 1279 ~~~ 1281 (1300)
.+.
T Consensus 227 ~~~ 229 (239)
T cd03296 227 HPA 229 (239)
T ss_pred CCC
Confidence 543
No 153
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-40 Score=368.98 Aligned_cols=224 Identities=29% Similarity=0.465 Sum_probs=191.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCCCHHHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSIGLHDL 1128 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i~~~~l 1128 (1300)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++...+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999975 3599999999999999999999999999999999999984 69999999999988887888
Q ss_pred hcccEEEcCCCCCC-cccHHHhcCCCC---CC--C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1129 RSRLSIIPQDPTMF-EGTVRNNLDPLE---EY--K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf-~gTvr~Nl~~~~---~~--~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
|++++|+||++.+| ..|+++|+.+.. .. . ++++.++++.+++.+.+.. .++ ....+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKD---RLD----APAGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhh---hhc----CCcccCCHHHHH
Confidence 89999999999765 569999986321 11 1 3457788888888653321 223 345689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999876 9999999999999999999998
Q ss_pred hcCCChHHH
Q 000755 1278 ENKSSSFAQ 1286 (1300)
Q Consensus 1278 ~~~~~~f~~ 1286 (1300)
+++...+.+
T Consensus 234 ~~~~~~~~~ 242 (250)
T PRK14247 234 TNPRHELTE 242 (250)
T ss_pred cCCccHHHH
Confidence 765444433
No 154
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-40 Score=369.02 Aligned_cols=211 Identities=28% Similarity=0.438 Sum_probs=182.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC---HHHHhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG---LHDLRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~---~~~lr~~ 1131 (1300)
++++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999752 35999999999999999999999999999999999999999999999999998776 4567889
Q ss_pred cEEEcCCCCCCc-ccHHHhcCCCC---------------CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChh
Q 000755 1132 LSIIPQDPTMFE-GTVRNNLDPLE---------------EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMG 1195 (1300)
Q Consensus 1132 i~~vpQ~~~lf~-gTvr~Nl~~~~---------------~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgG 1195 (1300)
++|+||++.+|. .|+++|+.... ...++++.++++.+++.+.. ...+.+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-----------YQRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-----------CCCcccCCHH
Confidence 999999998886 59999985311 11133466677777765432 3345689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecC
Q 000755 1196 QRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDS 1272 (1300)
Q Consensus 1196 qrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~ 1272 (1300)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999864 37899999999999986 99999999999999999
Q ss_pred hhhHH
Q 000755 1273 PTKLL 1277 (1300)
Q Consensus 1273 ~~~l~ 1277 (1300)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 98874
No 155
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-40 Score=368.96 Aligned_cols=223 Identities=27% Similarity=0.412 Sum_probs=190.4
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCC--CCH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISS--IGL 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~--i~~ 1125 (1300)
..++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 6 AIIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred ceEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 36999999999975 3599999999999999999999999999999999999997 48999999999853 234
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCCC---C-CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPLE---E-YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~-~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
...|++++|+||++.+|..|+++|+.+.. . .. ++.+.++++.+++.+.+. ..+++ .+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---DKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---HHHhC----CcccCCHHHH
Confidence 56788999999999998899999996421 1 11 345677888888754332 22333 4578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998667899999999999877 999999999999999999999
Q ss_pred HhcCCChH
Q 000755 1277 LENKSSSF 1284 (1300)
Q Consensus 1277 ~~~~~~~f 1284 (1300)
.+++.-.|
T Consensus 237 ~~~~~~~~ 244 (254)
T PRK14273 237 FFNPKNTK 244 (254)
T ss_pred HhCCCChH
Confidence 87654443
No 156
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.3e-40 Score=364.13 Aligned_cols=202 Identities=25% Similarity=0.353 Sum_probs=175.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH---HHhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH---DLRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~---~lr~~ 1131 (1300)
++++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999965434699999999999999999999999999999999999999999999999998766543 36788
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPL---EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+||++.+|.. |+++|+... ... .++++.++++.+++.+...+.+ .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 9999999998864 999998642 111 2346788899998876544433 46899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEE
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGII 1267 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i 1267 (1300)
|||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998864 37899999999999987 999999999975
No 157
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-40 Score=374.59 Aligned_cols=211 Identities=27% Similarity=0.409 Sum_probs=186.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 58999999999643 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCC--CCCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1134 IIPQDP--TMFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1134 ~vpQ~~--~lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
|+||+| .++..|+++|+.+.. ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 577889999996421 122 245678889988876554443 468999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||+.+|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999999998864 37899999999999976 999999999999999998765
No 158
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.5e-40 Score=379.56 Aligned_cols=213 Identities=27% Similarity=0.424 Sum_probs=185.6
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
..|+++|++++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999975 35999999999999999999999999999999999999999999999999997654 4578899
Q ss_pred EEEcCCCCCCc-ccHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1133 SIIPQDPTMFE-GTVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1133 ~~vpQ~~~lf~-gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
||+||++.+|. .|+++|+.++. ..++ +.+.++++.+++.+.. ++++ .+||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-------DAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-------cCch----hhCCHHHHHHHHHHH
Confidence 99999999886 59999996432 1222 3455677777775432 3333 479999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
||+.+|++|+|||||+|||+.+...+.+.|++.. +++|||++||+++++.. ||||++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 37899999999999987 999999999999999999999754
No 159
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.9e-40 Score=367.21 Aligned_cols=212 Identities=25% Similarity=0.415 Sum_probs=182.2
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hcccE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRLS 1133 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i~ 1133 (1300)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.... |.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 468999999974 359999999999999999999999999999999999999999999999999988776554 56799
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC----CC-------------CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChh
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE----EY-------------KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMG 1195 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~----~~-------------~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgG 1195 (1300)
|+||++.+|.+ |+++|+.... .. ..+.+.++++.+++.+. .......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADL-----------ADRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccch-----------hhCChhhCCHH
Confidence 99999999886 9999985321 10 12234556666665432 33445679999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecCh
Q 000755 1196 QRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1196 qrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~ 1273 (1300)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999998865 57899999999999987 999999999999999999
Q ss_pred hhHHhc
Q 000755 1274 TKLLEN 1279 (1300)
Q Consensus 1274 ~~l~~~ 1279 (1300)
+++.++
T Consensus 228 ~~~~~~ 233 (236)
T cd03219 228 DEVRNN 233 (236)
T ss_pred HHhccC
Confidence 998754
No 160
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=371.07 Aligned_cols=223 Identities=23% Similarity=0.492 Sum_probs=190.7
Q ss_pred CCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--
Q 000755 1050 PTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS-- 1122 (1300)
Q Consensus 1050 p~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~-- 1122 (1300)
|....|+++|++++|++. .+|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGTF--EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECCE--EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 344579999999999753 59999999999999999999999999999999999987 699999999999853
Q ss_pred CCHHHHhcccEEEcCCCCCCcccHHHhcCCCC---CC---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhH
Q 000755 1123 IGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1123 i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
.+..++|++++|+||++.+|..|+++|+.+.. .. .++++.++++.+++.+.+. ........+||+||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHH
Confidence 45667888999999999999889999997532 11 1345667788887654322 22344567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeC-----------
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSH----------- 1264 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~----------- 1264 (1300)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..++.|||++||+++.+.. ||+|++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999987667899999999999987 999999996
Q ss_pred CEEEEecChhhHHhcCC
Q 000755 1265 GIIEEYDSPTKLLENKS 1281 (1300)
Q Consensus 1265 G~i~e~g~~~~l~~~~~ 1281 (1300)
|++++.|+++++++++.
T Consensus 240 g~~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 240 GYLVEFNETKKIFNSPK 256 (269)
T ss_pred ceEEEeCCHHHHHhCcC
Confidence 67999999999987554
No 161
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-40 Score=369.20 Aligned_cols=223 Identities=30% Similarity=0.447 Sum_probs=189.7
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecC--CCCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINIS--SIGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~--~i~~~ 1126 (1300)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++. ..+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 5899999999975 3599999999999999999999999999999999999987 4999999999987 45556
Q ss_pred HHhcccEEEcCCCCCCcc-cHHHhcCCC---CCC--C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhH
Q 000755 1127 DLRSRLSIIPQDPTMFEG-TVRNNLDPL---EEY--K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~--~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
.+|++++|+||++.+|.. |+++|+... ... . ++++.++++.+++.+.+.. .......+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD-------RLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh-------hhccChhhCCHHH
Confidence 778899999999999976 999998632 111 1 2346677888877543321 2234567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667999999999999877 99999999999999999999
Q ss_pred HHhcCCChHH
Q 000755 1276 LLENKSSSFA 1285 (1300)
Q Consensus 1276 l~~~~~~~f~ 1285 (1300)
+.+++...+.
T Consensus 235 ~~~~~~~~~~ 244 (253)
T PRK14267 235 VFENPEHELT 244 (253)
T ss_pred HHhCCCcHHH
Confidence 9865443343
No 162
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-40 Score=366.40 Aligned_cols=220 Identities=25% Similarity=0.408 Sum_probs=188.2
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4689999999753 359999999999999999999999999999999999999999999999999988777788889999
Q ss_pred EcCCCCCCc-ccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFE-GTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|. .|+++|+.... ... ++++.++++.+++.+. ......+.+||||||||++||||+
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---------~~~~~~~~~LS~G~~qrv~laral 150 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPA---------EFADRYPHELSGGQQQRVGVARAL 150 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcH---------HHHhcChhhCCHHHHHHHHHHHHH
Confidence 999999886 59999986421 112 2356677888877530 012234568999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCCh
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSSS 1283 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~~ 1283 (1300)
+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++...
T Consensus 151 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~ 230 (242)
T cd03295 151 AADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPAND 230 (242)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCCh
Confidence 999999999999999999999999999998653 7899999999998876 9999999999999999999987654433
Q ss_pred H
Q 000755 1284 F 1284 (1300)
Q Consensus 1284 f 1284 (1300)
+
T Consensus 231 ~ 231 (242)
T cd03295 231 F 231 (242)
T ss_pred H
Confidence 3
No 163
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=370.00 Aligned_cols=222 Identities=24% Similarity=0.417 Sum_probs=191.1
Q ss_pred CCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCC--C
Q 000755 1051 THGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISS--I 1123 (1300)
Q Consensus 1051 ~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~--i 1123 (1300)
+.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999975 3599999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcccEEEcCCCCCCcccHHHhcCCCC---CC--C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCCh
Q 000755 1124 GLHDLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY--K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSM 1194 (1300)
Q Consensus 1124 ~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~--~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSg 1194 (1300)
+...+|++++|+||++.+|..|+++|+.+.. .. . ++++.++++.+++.+.+.. .....+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 4556788999999999999889999996421 11 1 2446778888888654321 22345678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecCh
Q 000755 1195 GQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1195 GqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~ 1273 (1300)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999977 999999999999999999
Q ss_pred hhHHhcCC
Q 000755 1274 TKLLENKS 1281 (1300)
Q Consensus 1274 ~~l~~~~~ 1281 (1300)
+++..++.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99986544
No 164
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-40 Score=365.45 Aligned_cols=214 Identities=28% Similarity=0.426 Sum_probs=185.0
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---Hh
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---LR 1129 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---lr 1129 (1300)
|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..+ .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997531 26999999999999999999999999999999999999999999999999998765443 47
Q ss_pred cccEEEcCCCCCCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1130 SRLSIIPQDPTMFE-GTVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~-gTvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
++++|+||++.+|. .|+++|+... .... ++++.++++..++.+...+ ...+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADA-----------YPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 78999999999987 5999998532 1122 3456778888887654433 23578999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998642 7899999999999987 99999999999999999998875
Q ss_pred c
Q 000755 1279 N 1279 (1300)
Q Consensus 1279 ~ 1279 (1300)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 165
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-40 Score=373.74 Aligned_cols=214 Identities=27% Similarity=0.416 Sum_probs=189.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++||+++|+...+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 58999999999754456999999999999999999999999999999999999999999999999998888778888999
Q ss_pred EEcCCC--CCCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1134 IIPQDP--TMFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1134 ~vpQ~~--~lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
|+||++ .++..|+++|+.... ..+ ++++.++++.+++.+.+...+ ..||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 456779999996421 122 234677888888877655544 468999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHh
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+++++..
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999998753 689999999999998899999999999999999998875
No 166
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1e-39 Score=382.50 Aligned_cols=216 Identities=24% Similarity=0.408 Sum_probs=189.3
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 4889999999975 359999999999999999999999999999999999999999999999999987653 456899
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC-------CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE-------EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~-------~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
|+||++.+|+. |+++|+.+.. ..+ ++++.++++.+++.+...+.| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 9999997431 112 245677888888876554433 578999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998653 6899999999999887 99999999999999999999998
Q ss_pred cCCChH
Q 000755 1279 NKSSSF 1284 (1300)
Q Consensus 1279 ~~~~~f 1284 (1300)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 766544
No 167
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-40 Score=361.05 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=174.6
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ..+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 478999999975 35999999999999999999999999999999999999999999999999987644 24678999
Q ss_pred EcCCCCCCc-ccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFE-GTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|. .|+++|+.... ... ++++.++++.+++.+...+. ..+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRY-----------PHELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHHHHHHH
Confidence 999998886 59999986421 111 23467788888876554433 357899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
+++|++|||||||++||+.+...+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999999877 9999999999998765
No 168
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9e-40 Score=383.43 Aligned_cols=219 Identities=22% Similarity=0.405 Sum_probs=192.0
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCc--ceEEECCeecCCCCHHHHh
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTA--GEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~--G~I~idg~di~~i~~~~lr 1129 (1300)
.|.|+++|++++|+.. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.+||.++...+.. +
T Consensus 3 ~~~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~--~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGAN--TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH--K 78 (362)
T ss_pred ceEEEEEEEEEEECCe--EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--H
Confidence 4679999999999753 59999999999999999999999999999999999999999 9999999999876653 5
Q ss_pred cccEEEcCCCCCCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1130 SRLSIIPQDPTMFEG-TVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
++++|++|++.+|+. ||++|+.+. ...+ ++++.++++.+++.+...+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 689999999999976 999999642 1222 234677888888877655544 468999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC---CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS---DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~---~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|||||+++|++|+|||||++||+.+...+.+.|++..+ +.|+|+|||+++++.. ||||++|++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987653 6899999999999877 9999999999999999999999
Q ss_pred hcCCChHH
Q 000755 1278 ENKSSSFA 1285 (1300)
Q Consensus 1278 ~~~~~~f~ 1285 (1300)
+++...|.
T Consensus 228 ~~p~~~~~ 235 (362)
T TIGR03258 228 DAPADGFA 235 (362)
T ss_pred hCcCcHHH
Confidence 87765553
No 169
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.6e-40 Score=386.52 Aligned_cols=220 Identities=25% Similarity=0.421 Sum_probs=193.3
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++..+++++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999975 36999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EEcCCCCC-CcccHHHhcCCCC-----------CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1134 IIPQDPTM-FEGTVRNNLDPLE-----------EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1134 ~vpQ~~~l-f~gTvr~Nl~~~~-----------~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
|+||++.+ |..|+++|+.... ...++.+.++++.+++.+...+ ...+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHH
Confidence 99999987 5679999985421 1123457889999998765433 23578999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||||+++|++|||||||++||+.+...+.+.|++.. .+.|||+++|+++.+.. |||+++|++|++++.|+|+++++.
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999875 47899999999999976 999999999999999999999853
Q ss_pred CCChHHHHH
Q 000755 1280 KSSSFAQLV 1288 (1300)
Q Consensus 1280 ~~~~f~~l~ 1288 (1300)
..+.+++
T Consensus 230 --~~l~~~~ 236 (402)
T PRK09536 230 --DTLRAAF 236 (402)
T ss_pred --HHHHHHh
Confidence 2344444
No 170
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.2e-39 Score=365.68 Aligned_cols=237 Identities=37% Similarity=0.636 Sum_probs=204.4
Q ss_pred HHHHHhcCCCCCcccccCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccc
Q 000755 590 RIASFLCLDDLQSDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV 669 (1300)
Q Consensus 590 RI~~fL~~~e~~~~~~~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~ 669 (1300)
.+.+.+..+..+++ ..+ .......|+++|+++.+ +++|+|+||+|++|++++|+|+||||||||+++|+|.+
T Consensus 16 ~~~~~~~~~~~~~~-~~~--~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~ 87 (282)
T cd03291 16 GFGELLEKAKQENN-DRK--HSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGEL 87 (282)
T ss_pred HHHHHHhccccccc-ccc--cCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 45555655433222 122 22345679999999962 46999999999999999999999999999999999999
Q ss_pred cCCccEEEEcCeEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 670 PKISGTLKLCGTKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 670 ~~~~G~i~~~g~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
+|++|+|.++|.++|++|++++++.|++||+.++......++.++++++++.+.++.+|.+.++.+++++.+||||||||
T Consensus 88 ~p~~G~I~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qr 167 (282)
T cd03291 88 EPSEGKIKHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRAR 167 (282)
T ss_pred CCCCcEEEECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHH
Confidence 99999999999999999999999999999999986655567778888889999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
++||||++++|+++||||||++||+.+...+.+.++..+.+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 168 v~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 168 ISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred HHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988887655555556799999999999998899999999999999999999876
Q ss_pred cCchH
Q 000755 830 SGTDF 834 (1300)
Q Consensus 830 ~~~~~ 834 (1300)
...++
T Consensus 248 ~~~~~ 252 (282)
T cd03291 248 LRPDF 252 (282)
T ss_pred cchHH
Confidence 44433
No 171
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.1e-40 Score=366.28 Aligned_cols=211 Identities=28% Similarity=0.413 Sum_probs=181.6
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH---HHHhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL---HDLRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~---~~lr~~ 1131 (1300)
|+++|++++|+.+ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999722 459999999999999999999999999999999999999999999999999877654 346788
Q ss_pred cEEEcCCCCCCc-ccHHHhcCCCC------------C---CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChh
Q 000755 1132 LSIIPQDPTMFE-GTVRNNLDPLE------------E---YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMG 1195 (1300)
Q Consensus 1132 i~~vpQ~~~lf~-gTvr~Nl~~~~------------~---~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgG 1195 (1300)
++|+||++.+|. .|+++|+.... . ..++++.++++.+++.+... ....+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAY-----------QRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHH
Confidence 999999998886 59999985311 0 11235667778777754332 345679999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecC
Q 000755 1196 QRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDS 1272 (1300)
Q Consensus 1196 qrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~ 1272 (1300)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999999864 26899999999999976 99999999999999999
Q ss_pred hhhHH
Q 000755 1273 PTKLL 1277 (1300)
Q Consensus 1273 ~~~l~ 1277 (1300)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 98874
No 172
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=6.9e-40 Score=383.36 Aligned_cols=206 Identities=27% Similarity=0.403 Sum_probs=181.8
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH----hcccEEEcCCCCCCcc
Q 000755 1069 PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL----RSRLSIIPQDPTMFEG 1144 (1300)
Q Consensus 1069 ~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l----r~~i~~vpQ~~~lf~g 1144 (1300)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||.++...+..++ |++++|+||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 358999999999999999999999999999999999999999999999999999888877 7789999999999975
Q ss_pred -cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000755 1145 -TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLD 1216 (1300)
Q Consensus 1145 -Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLD 1216 (1300)
||++|+.+.. ..+ .+++.++++.++|.++..+.| .+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999986421 122 345677888888876654443 578999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCChHH
Q 000755 1217 EATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSSSFA 1285 (1300)
Q Consensus 1217 EpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~ 1285 (1300)
|||++||+.+.+.+++.+.+.. .++|||+|||+++++.. ||||++|++|++++.|+|+++++++...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 9999999999999999998764 37899999999999877 999999999999999999999987655443
No 173
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-39 Score=354.98 Aligned_cols=199 Identities=23% Similarity=0.411 Sum_probs=182.0
Q ss_pred EEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1055 VDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
++++||+++|++.. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57899999997642 3699999999999999999999999999999999999999999999998 6
Q ss_pred cEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1132 LSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1132 i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
++|+||+|.+|++|+++|+.+.....+++.+++++.+++.+++...|.|+++.+.+.+.+||+|||||++||||++.+|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765556667888899999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHH-HHHHhc-CCcEEEEEeCChhhhhccCEEEEEeCCE
Q 000755 1212 VLVLDEATASVDTATDNLIQQ-TLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGI 1266 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~-~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl~~G~ 1266 (1300)
+++|||||++||+.+.+.+.+ .+++.. ++.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999888877 566554 3689999999999998899999999985
No 174
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.7e-39 Score=382.37 Aligned_cols=217 Identities=24% Similarity=0.380 Sum_probs=192.0
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
..++++|++++|+. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999975 3589999999999999999999999999999999999999999999999999877654 4689
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
+|++|++.+|+. ||++|+.+.. ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 9999996421 122 235677888888877766655 468999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCC
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKS 1281 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~ 1281 (1300)
||+++|++|+|||||++||..+++.+.+.|++..+ +.|+|+|||+.+++.. ||+|++|++|+|++.|+|+++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998653 6899999999999877 99999999999999999999998876
Q ss_pred ChH
Q 000755 1282 SSF 1284 (1300)
Q Consensus 1282 ~~f 1284 (1300)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 555
No 175
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-40 Score=354.78 Aligned_cols=190 Identities=36% Similarity=0.454 Sum_probs=165.0
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------EEEEec
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQ 687 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------~ayv~Q 687 (1300)
.+++++++.+|.. ..+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 5889999999973 67999999999999999999999999999999999999999999999884 699999
Q ss_pred CCcCCC-CCHHHHHhcCCCCC-------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 000755 688 SPWIQS-GNIEDNILFGKPMD-------REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 759 (1300)
Q Consensus 688 ~~~l~~-~Ti~eNI~fg~~~~-------~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~ 759 (1300)
++-++. -||+||+.||.+.. +++..+.++.++|...-+..| ..||||||||+||||||..+
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL~~~ 148 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARALATR 148 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHHhcC
Confidence 988765 69999999987641 346777888888877666555 57999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcc-ccCCEEEEEeC--CeEE
Q 000755 760 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFL-PAADLILVMKD--GKIT 819 (1300)
Q Consensus 760 ~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l-~~~d~i~~l~~--G~i~ 819 (1300)
|+|+||||||+|||+.|+.++-+.++.-+. .++|+++|||+++.. .-+|||++|.+ |+|.
T Consensus 149 P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 149 PKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999988766554433 369999999999874 55999999999 5553
No 176
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=373.63 Aligned_cols=213 Identities=29% Similarity=0.407 Sum_probs=184.0
Q ss_pred EEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC----CCHHH
Q 000755 1055 VDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS----IGLHD 1127 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~----i~~~~ 1127 (1300)
|+++|++++|++.. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999863 33566
Q ss_pred HhcccEEEcCCC--CCCcccHHHhcCCCC---CCCH----HHHHHHHHHcCCcH-HHHhhcCCCccccccCCCCCChhHH
Q 000755 1128 LRSRLSIIPQDP--TMFEGTVRNNLDPLE---EYKD----EEIWEALDKCQLGD-EVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1128 lr~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~-~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
+|++++|++|+| .+|..|+.+|+.+.. ..+. +++.++++.+++.+ +. .....+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFW-----------EKSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhc-----------cCCcccCCHHHH
Confidence 888999999998 688899999996432 1222 34667788888742 22 234468999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
||++|||||+.+|++|||||||++||+.+...+.+.|++.. .+.|||++||+++.+.. ||||++|++|++++.|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998764 47899999999999876 99999999999999999999
Q ss_pred HHh
Q 000755 1276 LLE 1278 (1300)
Q Consensus 1276 l~~ 1278 (1300)
+..
T Consensus 231 ~~~ 233 (288)
T PRK13643 231 VFQ 233 (288)
T ss_pred HHc
Confidence 875
No 177
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=373.21 Aligned_cols=216 Identities=25% Similarity=0.398 Sum_probs=183.6
Q ss_pred eEEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCC----CHH
Q 000755 1054 EVDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSI----GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i----~~~ 1126 (1300)
.|+++|++++|++.. +++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996432 3599999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcccEEEcCCC--CCCcccHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1127 DLRSRLSIIPQDP--TMFEGTVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
.+|++++|+||+| .+|+.|+++|+.+.. ..+. +.+.++++.+++... .....+.+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 6888999999998 578889999996421 1232 334556666666411 12235578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChh
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPT 1274 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~ 1274 (1300)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999864 37899999999999876 9999999999999999999
Q ss_pred hHHhc
Q 000755 1275 KLLEN 1279 (1300)
Q Consensus 1275 ~l~~~ 1279 (1300)
+++++
T Consensus 232 ~~~~~ 236 (286)
T PRK13646 232 ELFKD 236 (286)
T ss_pred HHHhC
Confidence 98754
No 178
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-39 Score=359.89 Aligned_cols=212 Identities=24% Similarity=0.436 Sum_probs=179.3
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hcccE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRLS 1133 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i~ 1133 (1300)
|+++|++++|+.. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 5789999999753 59999999999999999999999999999999999999999999999999987776654 56799
Q ss_pred EEcCCCCCCcc-cHHHhcCCCCC-C-C---HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHc
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLEE-Y-K---DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLL 1207 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~~-~-~---d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall 1207 (1300)
|+||++.+|.+ |+++|+.+... . . .+++.++++.++ +++........+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP----------RLKERRKQLAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH----------hhhhhhhCchhhCCHHHHHHHHHHHHHh
Confidence 99999999886 99999864321 1 1 122333444431 1222233455789999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1208 KKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1208 ~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999998865 47899999999999877 99999999999999999888753
No 179
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-39 Score=359.23 Aligned_cols=208 Identities=26% Similarity=0.381 Sum_probs=180.7
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ..+++++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999975 3599999999999999999999999999999999999999999999999988653 3567788999
Q ss_pred EcCCCCCCcc-cHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPL---EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~---~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+++. |+++|+... ... .++++.++++.+++.+..... ...||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-----------VKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999988875 999998531 111 234567788888886654433 246899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999988643 6899999999999987 999999999999999988764
No 180
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=384.05 Aligned_cols=217 Identities=21% Similarity=0.349 Sum_probs=188.9
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~~--~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGDV--VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCCe--EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 48999999999753 599999999999999999999999999999999999999999999999999876543 46799
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
|+||++.+|.. |+++|+.+.. ..+ ++++.++++.+++.+...+.+ .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 9999996421 122 245677888888866544433 5689999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCC
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSS 1282 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~ 1282 (1300)
|+++|++|||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999988643 6899999999999887 999999999999999999999887665
Q ss_pred hHH
Q 000755 1283 SFA 1285 (1300)
Q Consensus 1283 ~f~ 1285 (1300)
.|.
T Consensus 228 ~~~ 230 (369)
T PRK11000 228 RFV 230 (369)
T ss_pred HHH
Confidence 543
No 181
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=366.47 Aligned_cols=223 Identities=24% Similarity=0.398 Sum_probs=189.1
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCCC--H
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSIG--L 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i~--~ 1125 (1300)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++...+ .
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 36999999999974 3599999999999999999999999999999999999985 7999999999986432 3
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
..+|+.++|+||++.+|..|+++|+.+.. ..+. +.+.++++.+++.+.+. .........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCHHHHH
Confidence 45678899999999999899999996421 1222 34667888887753221 1223455789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667999999999999977 9999999999999999999998
Q ss_pred hcCCChH
Q 000755 1278 ENKSSSF 1284 (1300)
Q Consensus 1278 ~~~~~~f 1284 (1300)
+++...+
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 7654443
No 182
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=365.08 Aligned_cols=220 Identities=25% Similarity=0.430 Sum_probs=188.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcC---CCC--CcceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRI---VEP--TAGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl---~~p--~~G~I~idg~di~~i--~~~ 1126 (1300)
.++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999975 3599999999999999999999999999999999997 454 589999999998753 345
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCC---CCC-----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPL---EEY-----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~~-----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|++++|+||++.+|..|+++|+... ... .+++++++++.+++.+.+.. .....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 678899999999999988999998632 111 23456778888887654321 233456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987667999999999999976 9999999999999999999998
Q ss_pred hcCCC
Q 000755 1278 ENKSS 1282 (1300)
Q Consensus 1278 ~~~~~ 1282 (1300)
+++..
T Consensus 234 ~~~~~ 238 (250)
T PRK14245 234 TNPEK 238 (250)
T ss_pred cCCCC
Confidence 76543
No 183
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=367.09 Aligned_cols=220 Identities=26% Similarity=0.479 Sum_probs=187.5
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS--IGL 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~--i~~ 1125 (1300)
..++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++.. .+.
T Consensus 20 ~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 20 HILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred ceEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 36999999999974 359999999999999999999999999999999999875 799999999999864 334
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCC----CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPL----EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~----~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
..+|++++|+||++.+|.+|+++|+... ... .++.+.++++.+++.+.+. ......+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHH
Confidence 4678899999999999989999998632 111 1234667777777753221 122345678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999876 999999999999999999999
Q ss_pred HhcCC
Q 000755 1277 LENKS 1281 (1300)
Q Consensus 1277 ~~~~~ 1281 (1300)
.+++.
T Consensus 251 ~~~~~ 255 (268)
T PRK14248 251 FTSPK 255 (268)
T ss_pred HhCCC
Confidence 87644
No 184
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-39 Score=330.39 Aligned_cols=210 Identities=27% Similarity=0.415 Sum_probs=186.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|.+++|.+.|... | =..+++|++||++||+||||||||||+++++|+..|.+|+|.|+|+|...-++.+ +-+++
T Consensus 2 l~L~~V~~~y~~~-~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHL-P---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVSM 75 (231)
T ss_pred ccccceEEeeCcc-e---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChhh
Confidence 5678999999753 3 3578999999999999999999999999999999999999999999998766554 56999
Q ss_pred EcCCCCCCcc-cHHHhcCCC----CC---CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPL----EE---YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~----~~---~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
++||..||.- ||++|+... -. ...+.+..++.++|+.++.+++|+ .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999976 999998643 12 234568899999999999999986 4699999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCC
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKS 1281 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~ 1281 (1300)
+++-+||+||||+|+||+.-++++...+.+.. ++.|+++|||.++.+.. +||++++++|||.+.|+.++++....
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999999999998865 46899999999999988 99999999999999999999987544
No 185
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=365.05 Aligned_cols=221 Identities=26% Similarity=0.437 Sum_probs=188.3
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CcceEEECCeecCC--CCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE--P---TAGEIVIDGINISS--IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~--p---~~G~I~idg~di~~--i~~~ 1126 (1300)
.|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQH--HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECCe--eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 69999999999753 59999999999999999999999999999999999997 3 59999999999863 3455
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCCC---C-CCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPLE---E-YKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~-~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|++++|+||++.+|..|+++|+.+.. . ..+ +++.++++.+++.+.+.. .....+.+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHH
Confidence 6788999999999999889999986421 1 122 235566777777544321 223456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++||||++++|++|+|||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|++++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999887 9999999999999999999998
Q ss_pred hcCCCh
Q 000755 1278 ENKSSS 1283 (1300)
Q Consensus 1278 ~~~~~~ 1283 (1300)
+++...
T Consensus 243 ~~~~~~ 248 (259)
T PRK14274 243 SNPDDQ 248 (259)
T ss_pred hCCCCH
Confidence 765443
No 186
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.4e-40 Score=373.71 Aligned_cols=213 Identities=28% Similarity=0.479 Sum_probs=188.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|+.+ ..+|+||||+|++||++|++||||||||||+++|+|+++|++|+|.++|.|...- ..+.|+++|
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 47889999999841 3599999999999999999999999999999999999999999999999998654 677899999
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC---C----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE---E----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~---~----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
|+||+|.+++. |++|||.++. . ..++.+.++++.++|.+.-. .....||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKAN-----------KKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhC-----------cchhhcCHHHHHHHHHHHH
Confidence 99999998876 9999997542 1 22467889999999976321 1235689999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-C-cEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-D-CTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~-~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|+.+|++|||||||+|||+.+...+.+.|++..+ + +||+++||.++++.. ||||++|++|+++.+|+++++...
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999775 4 699999999999998 999999999999999999998653
No 187
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-39 Score=355.45 Aligned_cols=198 Identities=25% Similarity=0.373 Sum_probs=172.5
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEE
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSII 1135 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~v 1135 (1300)
+++|++++|++. .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 367999999752 359999999999999999999999999999999999999999999999998854 4567789999
Q ss_pred cCCC--CCCcccHHHhcCCCC---CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1136 PQDP--TMFEGTVRNNLDPLE---EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1136 pQ~~--~lf~gTvr~Nl~~~~---~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
||++ .+|+.|+++|+.... ...++++.++++.+++.+...+.+ ..||||||||++|||||+.+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCC
Confidence 9998 367789999996432 122356888999999876544433 468999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEE
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIE 1268 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~ 1268 (1300)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999863 57899999999999987 9999999999975
No 188
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.4e-39 Score=360.93 Aligned_cols=211 Identities=24% Similarity=0.361 Sum_probs=181.7
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. .+++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~-~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRA-ALARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChh-hhhhEEE
Confidence 689999999974 3599999999999999999999999999999999999999999999999998776544 3458999
Q ss_pred EcCCCCCC-cccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMF-EGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf-~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.++ ..|+++|+.... ... ++++.+.++.+++.+. ......+||||||||++|||||
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 99999874 569999986421 122 2345566776666433 3344568999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
+++|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999999865 37899999999999988999999999999999999999864
No 189
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=360.98 Aligned_cols=208 Identities=25% Similarity=0.332 Sum_probs=179.6
Q ss_pred eEEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---H
Q 000755 1054 EVDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---L 1128 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---l 1128 (1300)
.++++||+++|+++. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999997532 46999999999999999999999999999999999999999999999999998877654 3
Q ss_pred h-cccEEEcCCCCCCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1129 R-SRLSIIPQDPTMFEG-TVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1129 r-~~i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
| ++++|+||++.+|+. |+++|+.+. .... ++++.++++.+++.+...+ ...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANH-----------RPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHH
Confidence 3 679999999998876 999998641 1212 2356778888877654333 346799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhccCEEEEEeCCEEEEecC
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDS 1272 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~ 1272 (1300)
++||||++.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999864 4789999999999999889999999999998765
No 190
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=365.91 Aligned_cols=220 Identities=25% Similarity=0.444 Sum_probs=190.3
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS--IGL 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~--i~~ 1125 (1300)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 46999999999964 469999999999999999999999999999999999997 589999999999864 345
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
..+|+.++|+||++.+|..|+++|+... .... ++++.++++.+++.+.+. ......+..||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHHH
Confidence 5678899999999999989999999642 1111 344667788888865442 223456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||++||||++++|++|||||||++||+.+...+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999999877 999999999999999999999
Q ss_pred HhcCC
Q 000755 1277 LENKS 1281 (1300)
Q Consensus 1277 ~~~~~ 1281 (1300)
.+.+.
T Consensus 250 ~~~~~ 254 (267)
T PRK14237 250 FTNPK 254 (267)
T ss_pred hcCCC
Confidence 86543
No 191
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=364.74 Aligned_cols=223 Identities=26% Similarity=0.414 Sum_probs=188.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS--IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~--i~~~ 1126 (1300)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 5899999999975 359999999999999999999999999999999999997 489999999999854 3345
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCCC---CC-----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|+.++|+||++.+|+.|+++|+.+.. .. .++++.++++.+++++... .. ....+.+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~----~~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK---DN----LDRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH---HH----hccChhhCCHHHHH
Confidence 6788899999999999999999996421 11 1234566777777743211 11 23455789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++||||++++|+++||||||++||+.+.+.+.+.|++..++.|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999887 9999999999999999999998
Q ss_pred hcCCChHH
Q 000755 1278 ENKSSSFA 1285 (1300)
Q Consensus 1278 ~~~~~~f~ 1285 (1300)
..+.-.|.
T Consensus 235 ~~~~~~~~ 242 (251)
T PRK14251 235 IAPKKQIT 242 (251)
T ss_pred hCCCCHHH
Confidence 65544443
No 192
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-39 Score=369.99 Aligned_cols=218 Identities=24% Similarity=0.385 Sum_probs=186.7
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH----hcc
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL----RSR 1131 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l----r~~ 1131 (1300)
.++|+++.|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQT--VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCCc--eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 566888888753 58999999999999999999999999999999999999999999999999987765443 457
Q ss_pred cEEEcCCCCCCc-ccHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFE-GTVRNNLDPL---EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~-gTvr~Nl~~~---~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+||++.+|. .|+++|+... ... .++++.++++.+++.+...+.+ .+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999885 5999998642 111 1345677888888876655443 46899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
|||+++|+||||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999998864 26899999999999876 9999999999999999999998765
Q ss_pred CChHHH
Q 000755 1281 SSSFAQ 1286 (1300)
Q Consensus 1281 ~~~f~~ 1286 (1300)
...+.+
T Consensus 253 ~~~~~~ 258 (269)
T cd03294 253 ANDYVR 258 (269)
T ss_pred CcHHHH
Confidence 554443
No 193
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4e-39 Score=359.35 Aligned_cols=219 Identities=30% Similarity=0.447 Sum_probs=194.4
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~a 683 (1300)
|+++|++++|+. ..+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKP-DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCC-CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 468999999963 2357999999999999999999999999999999999999999999999872 79
Q ss_pred EEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 000755 684 YVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADI 762 (1300)
Q Consensus 684 yv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~i 762 (1300)
|++|++++++.|++||+.++.+ ...++..+.++..++.+.++.+|.|.++..+.++.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999998754 345566666777788888889999999989999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchHHHH
Q 000755 763 YLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMVL 837 (1300)
Q Consensus 763 llLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l 837 (1300)
+||||||++||+.+...+.+ .+..+.+++|+|++||+++.+..||+|++|++|++++.|+++++......|..+
T Consensus 160 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~ 233 (237)
T cd03252 160 LIFDEATSALDYESEHAIMR-NMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYL 233 (237)
T ss_pred EEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHH
Confidence 99999999999999888865 455555689999999999999889999999999999999999988776555543
No 194
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=362.35 Aligned_cols=222 Identities=27% Similarity=0.463 Sum_probs=189.1
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCC--CCH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISS--IGL 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~--i~~ 1125 (1300)
|.|+++||+++|++. ++++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGDF--QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 569999999999753 599999999999999999999999999999999999863 69999999999864 345
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCCC---CC-----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
..+|++++|+||++.+|+.|+++|+.... .. .++++.++++.+++.+.+.. .....+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHHH
Confidence 56788999999999999899999996421 11 13445667777776543321 23345678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999887 999999999999999999999
Q ss_pred HhcCCCh
Q 000755 1277 LENKSSS 1283 (1300)
Q Consensus 1277 ~~~~~~~ 1283 (1300)
..++...
T Consensus 233 ~~~~~~~ 239 (250)
T PRK14240 233 FTNPKDK 239 (250)
T ss_pred HhCCCCh
Confidence 8654443
No 195
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=366.26 Aligned_cols=221 Identities=26% Similarity=0.438 Sum_probs=188.7
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCCCC--HHH
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISSIG--LHD 1127 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~i~--~~~ 1127 (1300)
-+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478899999964 369999999999999999999999999999999999986 47999999999986543 335
Q ss_pred HhcccEEEcCCCCCCcccHHHhcCCC---CC------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1128 LRSRLSIIPQDPTMFEGTVRNNLDPL---EE------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
+|++++|+||++.+|.+|+++|+... .. ..++++.++++.+++.+.+. +.+...+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHHH
Confidence 78899999999999989999998632 11 11345677888888765322 1233456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987668999999999999987 9999999999999999999998
Q ss_pred hcCCChH
Q 000755 1278 ENKSSSF 1284 (1300)
Q Consensus 1278 ~~~~~~f 1284 (1300)
+++...+
T Consensus 237 ~~~~~~~ 243 (251)
T PRK14244 237 KNPQSSK 243 (251)
T ss_pred cCCCChH
Confidence 7665544
No 196
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=370.77 Aligned_cols=213 Identities=29% Similarity=0.426 Sum_probs=185.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecC--CCCHHHHhcc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINIS--SIGLHDLRSR 1131 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~--~i~~~~lr~~ 1131 (1300)
.|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 58999999999633 35999999999999999999999999999999999999999999999999984 3345678889
Q ss_pred cEEEcCCC--CCCcccHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHH
Q 000755 1132 LSIIPQDP--TMFEGTVRNNLDPL---EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCL 1202 (1300)
Q Consensus 1132 i~~vpQ~~--~lf~gTvr~Nl~~~---~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~L 1202 (1300)
++|+||+| .+|+.|+++|+... ...+. +.+.++++.+++.+.. ...+.+||||||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHHH
Confidence 99999998 56788999999642 12222 3456678888876543 23456899999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1203 GRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1203 ARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||||++|++|++++.|+++++++
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999988753 7899999999999986 99999999999999999999875
No 197
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-39 Score=359.22 Aligned_cols=202 Identities=28% Similarity=0.416 Sum_probs=173.5
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH----H
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD----L 1128 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~----l 1128 (1300)
|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999997521 36999999999999999999999999999999999999999999999999998766432 3
Q ss_pred hcccEEEcCCCCCCcc-cHHHhcCCCC---CC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1129 RSRLSIIPQDPTMFEG-TVRNNLDPLE---EY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf~g-Tvr~Nl~~~~---~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
+++++|+||++.+|.+ |+++|+.... .. .++++.++++.+++.+...+ ...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNH-----------YPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhc-----------ChhhcCHHHHHHH
Confidence 5689999999999876 9999986421 11 13456778888877654433 3357899999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEE
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGII 1267 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i 1267 (1300)
+|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999877999999999974
No 198
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=364.19 Aligned_cols=220 Identities=29% Similarity=0.432 Sum_probs=187.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCC--CC---CcceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIV--EP---TAGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~--~p---~~G~I~idg~di~~i--~~~ 1126 (1300)
.++++|++++|+.. ++|+|+||+|++||++||+||||||||||+++|+|+. +| ++|+|.+||.++... ...
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNKK--KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECCe--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 58999999999753 5999999999999999999999999999999999995 46 599999999998643 345
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCC----CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPL----EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~----~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|+.++|+||++.+|+.|+++|+... ... .++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678889999999999999999998632 111 12345667888877543321 234456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999876 9999999999999999999998
Q ss_pred hcCCC
Q 000755 1278 ENKSS 1282 (1300)
Q Consensus 1278 ~~~~~ 1282 (1300)
+++..
T Consensus 236 ~~~~~ 240 (252)
T PRK14239 236 MNPKH 240 (252)
T ss_pred hCCCC
Confidence 76543
No 199
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.6e-39 Score=352.74 Aligned_cols=201 Identities=60% Similarity=1.011 Sum_probs=184.1
Q ss_pred EEEEeEEEEecCCCC--CCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCeEEEEecCCcCCCC
Q 000755 617 IEIVDGNFAWDISSN--NPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSG 694 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~~ayv~Q~~~l~~~ 694 (1300)
++++|++++|+.... .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999964211 369999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 000755 695 NIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDA 774 (1300)
Q Consensus 695 Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~ 774 (1300)
|++||+.++..+++++..++++.+++.+.+..+|.|++|.+++++.+||||||||++||||++++|++++|||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999877777778888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc-CCcEEEEEecCCCccccCCEEEEEeCCe
Q 000755 775 HTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPAADLILVMKDGK 817 (1300)
Q Consensus 775 ~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~~d~i~~l~~G~ 817 (1300)
+..+.+++.++.... +++|+|++||+++.+..||++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 998888876655443 4689999999999988899999999985
No 200
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=372.88 Aligned_cols=215 Identities=21% Similarity=0.309 Sum_probs=183.6
Q ss_pred eEEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC--------
Q 000755 1054 EVDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS-------- 1122 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~-------- 1122 (1300)
.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999997542 259999999999999999999999999999999999999999999999887632
Q ss_pred ----------------CCHHHHhcccEEEcCCC--CCCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCc-HHHHh
Q 000755 1123 ----------------IGLHDLRSRLSIIPQDP--TMFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLG-DEVRN 1176 (1300)
Q Consensus 1123 ----------------i~~~~lr~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~-~~i~~ 1176 (1300)
.+...+|++++|+||+| .+|..||++|+.+.. ..+ ++++.++++.+++. +...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~- 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ- 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-
Confidence 13456788999999986 578889999996431 222 23467788888875 3332
Q ss_pred hcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc
Q 000755 1177 KEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID 1255 (1300)
Q Consensus 1177 ~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~ 1255 (1300)
....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..
T Consensus 161 ----------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 161 ----------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 3346789999999999999999999999999999999999999999998864 47899999999998876
Q ss_pred -cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1256 -SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1256 -~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
||||++|++|++++.|+++++.++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998754
No 201
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.6e-39 Score=367.50 Aligned_cols=223 Identities=22% Similarity=0.341 Sum_probs=189.3
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH---HHhc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH---DLRS 1130 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~---~lr~ 1130 (1300)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998776543 3577
Q ss_pred ccEEEcCCCCCCcc-cHHHhcCCC----CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1131 RLSIIPQDPTMFEG-TVRNNLDPL----EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~g-Tvr~Nl~~~----~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
+++|+||++.+|.+ |+++|+.+. ...+. +.+.++++.+++.+.... ...+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKL-----------MPSELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHH
Confidence 89999999999986 999998531 11222 345567788877554332 33578999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998643 6899999999999987 99999999999999999999987
Q ss_pred cCCChHHHHHH
Q 000755 1279 NKSSSFAQLVA 1289 (1300)
Q Consensus 1279 ~~~~~f~~l~~ 1289 (1300)
++......++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 55444455554
No 202
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.6e-39 Score=358.02 Aligned_cols=205 Identities=25% Similarity=0.397 Sum_probs=177.8
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
|+++|++++|+... +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999997532 269999999999999999999999999999999999999999999999999875 345678899
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
+|+||++.+|.+ |+++|+.... ... ++++.++++.+++.+...+ ...+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999886 9999985321 111 3456778888887655443 34578999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
|++.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999864 47899999999999887 9999999999998764
No 203
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=372.01 Aligned_cols=216 Identities=25% Similarity=0.405 Sum_probs=184.2
Q ss_pred eEEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC----CCHH
Q 000755 1054 EVDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS----IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~----i~~~ 1126 (1300)
.++++|++++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996431 359999999999999999999999999999999999999999999999999863 3456
Q ss_pred HHhcccEEEcCCC--CCCcccHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1127 DLRSRLSIIPQDP--TMFEGTVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
..|++++|+||+| .+|+.|+++|+.+.. ..+. +.+.++++.+++.+.+. ......||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 6788999999998 578889999986321 1232 24566788888753221 234467999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChh
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPT 1274 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~ 1274 (1300)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999988643 7899999999999876 9999999999999999999
Q ss_pred hHHhc
Q 000755 1275 KLLEN 1279 (1300)
Q Consensus 1275 ~l~~~ 1279 (1300)
++.++
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 98753
No 204
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=363.55 Aligned_cols=224 Identities=25% Similarity=0.437 Sum_probs=190.5
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i--~~~ 1126 (1300)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 5899999999974 3599999999999999999999999999999999999984 899999999998653 334
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCC----CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPL----EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~----~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|++++|+||++.+|..|+++|+... ... .++++.++++.+++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678889999999999999999999642 111 12346677888887654322 234556789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++||||++++|++|+|||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999987667899999999998876 9999999999999999999998
Q ss_pred hcCCChHHH
Q 000755 1278 ENKSSSFAQ 1286 (1300)
Q Consensus 1278 ~~~~~~f~~ 1286 (1300)
+++...|.+
T Consensus 234 ~~~~~~~~~ 242 (250)
T PRK14262 234 ERPKNKLTE 242 (250)
T ss_pred hCCCChHHH
Confidence 655444443
No 205
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.5e-39 Score=375.07 Aligned_cols=223 Identities=23% Similarity=0.364 Sum_probs=189.1
Q ss_pred eEEEEeeeeeeCCC-----------CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC
Q 000755 1054 EVDILNLQVRYAPH-----------LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS 1122 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~-----------~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~ 1122 (1300)
.++++|++++|+.. ...+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 59999999999631 2358999999999999999999999999999999999999999999999999988
Q ss_pred CCHHH---HhcccEEEcCCC--CCCc-ccHHHhcCC----C-CCCCH----HHHHHHHHHcCCcHHHHhhcCCCcccccc
Q 000755 1123 IGLHD---LRSRLSIIPQDP--TMFE-GTVRNNLDP----L-EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTE 1187 (1300)
Q Consensus 1123 i~~~~---lr~~i~~vpQ~~--~lf~-gTvr~Nl~~----~-~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e 1187 (1300)
++.++ +|++++||||+| .+++ .|+.+|+.. . ...+. +.+.++++.+++.+.+ ...
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~----------~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNL----------INR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHH----------hcC
Confidence 87544 577899999998 4664 699999842 1 12332 3355678888874321 122
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeC
Q 000755 1188 NGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSH 1264 (1300)
Q Consensus 1188 ~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~ 1264 (1300)
...+||||||||++|||||+.+|++||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 3467899999999999999999999999999999999999999999988643 7899999999999987 999999999
Q ss_pred CEEEEecChhhHHhcCCChHHH
Q 000755 1265 GIIEEYDSPTKLLENKSSSFAQ 1286 (1300)
Q Consensus 1265 G~i~e~g~~~~l~~~~~~~f~~ 1286 (1300)
|+|+|.|+++++++++...|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999999876555554
No 206
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.9e-39 Score=346.24 Aligned_cols=178 Identities=35% Similarity=0.576 Sum_probs=165.0
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+...+++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999976434699999999999999999999999999999999999999999999999988765 5667889999
Q ss_pred EcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000755 1135 IPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLV 1214 (1300)
Q Consensus 1135 vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLl 1214 (1300)
+||++.+|+.|+++|+ ..+||+|||||++||||++++|++||
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999989999997 35789999999999999999999999
Q ss_pred EeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEec
Q 000755 1215 LDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1215 LDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g 1271 (1300)
|||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999876789999999999999889999999999998764
No 207
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.8e-39 Score=354.92 Aligned_cols=202 Identities=24% Similarity=0.387 Sum_probs=177.8
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ...|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 478999999964 3699999999999999999999999999999999999999999999999988654 566788999
Q ss_pred EcCCCCCCc-ccHHHhcCCC---CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1135 IPQDPTMFE-GTVRNNLDPL---EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~---~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
+||++.+|. .|+++|+.+. ...+++++.++++..++.+...+. ...||||||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999998875 6999998542 123466788889999887655443 3568999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998865 47899999999999987 9999999999998765
No 208
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=361.87 Aligned_cols=224 Identities=24% Similarity=0.433 Sum_probs=190.2
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CcceEEECCeecCCC--C
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE--P---TAGEIVIDGINISSI--G 1124 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~--p---~~G~I~idg~di~~i--~ 1124 (1300)
++.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 367999999999974 359999999999999999999999999999999999986 4 689999999998643 3
Q ss_pred HHHHhcccEEEcCCCCCCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChh
Q 000755 1125 LHDLRSRLSIIPQDPTMFE-GTVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMG 1195 (1300)
Q Consensus 1125 ~~~lr~~i~~vpQ~~~lf~-gTvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgG 1195 (1300)
...+|++++|+||++.+|. .|+++|+... ...+ ++++.++++.+++.+.+... ....+.+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCHH
Confidence 4567889999999999887 5999999631 1111 23466778888876544321 23356789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChh
Q 000755 1196 QRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPT 1274 (1300)
Q Consensus 1196 qrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~ 1274 (1300)
||||++||||++.+|++|||||||++||+.+...+.+.|++..++.|||++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988767899999999999977 9999999999999999999
Q ss_pred hHHhcCCChH
Q 000755 1275 KLLENKSSSF 1284 (1300)
Q Consensus 1275 ~l~~~~~~~f 1284 (1300)
++..++...+
T Consensus 233 ~~~~~~~~~~ 242 (252)
T PRK14256 233 KIFTTPEKKQ 242 (252)
T ss_pred HHHhCCCcHH
Confidence 9987655433
No 209
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-39 Score=368.34 Aligned_cols=213 Identities=23% Similarity=0.372 Sum_probs=187.0
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999643 24999999999999999999999999999999999999999999999999998777778889999
Q ss_pred EEcCCCC--CCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1134 IIPQDPT--MFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1134 ~vpQ~~~--lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
|+||++. +|+.|+++|+.... ..+ ++.+.++++.+++.+...+.+ ..||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 9999983 67789999996321 222 234677888888876544433 478999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||||++|++|++++.|+++++++
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 99999999999999999999999999999988653 6899999999999976 99999999999999999999875
No 210
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.8e-39 Score=361.81 Aligned_cols=212 Identities=25% Similarity=0.368 Sum_probs=184.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i 1132 (1300)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+..+. |..+
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999975 359999999999999999999999999999999999999999999999999987776554 4579
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCC------------C---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEE------------Y---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~------------~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
+|+||++.+|.+ |+++|+..... . .++++.++++.+++.+.. .....+|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-----------DRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHH
Confidence 999999999987 99999864211 0 133466777777765432 23446799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
|||++||||++++|++|+|||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999987 99999999999999999999
Q ss_pred HHh
Q 000755 1276 LLE 1278 (1300)
Q Consensus 1276 l~~ 1278 (1300)
+.+
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 874
No 211
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.1e-39 Score=363.64 Aligned_cols=218 Identities=28% Similarity=0.435 Sum_probs=187.5
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC-------
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG------- 1124 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~------- 1124 (1300)
.+.++++|++++|++. .+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++
T Consensus 3 ~~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4679999999999753 5999999999999999999999999999999999999999999999999886421
Q ss_pred ------HHHHhcccEEEcCCCCCCcc-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCC
Q 000755 1125 ------LHDLRSRLSIIPQDPTMFEG-TVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENG 1189 (1300)
Q Consensus 1125 ------~~~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G 1189 (1300)
...+|++++|+||++.+|+. |+++|+... .... ++++.+++++.++.+... ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 34567899999999999975 999998631 1112 245677888888765431 2345
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEE
Q 000755 1190 ENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGII 1267 (1300)
Q Consensus 1190 ~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i 1267 (1300)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6799999999999999999999999999999999999999999998865 37999999999999987 999999999999
Q ss_pred EEecChhhHHhcCC
Q 000755 1268 EEYDSPTKLLENKS 1281 (1300)
Q Consensus 1268 ~e~g~~~~l~~~~~ 1281 (1300)
++.|+++++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999876543
No 212
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-39 Score=356.03 Aligned_cols=202 Identities=28% Similarity=0.438 Sum_probs=177.3
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+.. ++++|+||++++| ++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 5789999999653 5999999999999 99999999999999999999999999999999999987766 677889999
Q ss_pred EcCCCCCCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|.+ |+++|+... .... ++++.++++.+++.+.... ...+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKK-----------KIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhC-----------chhhCCHHHHHHHHHHHHH
Confidence 9999999876 999998631 1111 3456778888888654332 2357999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
+++|++|||||||++||+.+.+.+.+.|++..++.|||++||+++.+.. |||+++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987667999999999999976 9999999999998764
No 213
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.7e-39 Score=362.96 Aligned_cols=217 Identities=25% Similarity=0.416 Sum_probs=185.9
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC----------
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG---------- 1124 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~---------- 1124 (1300)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 578999999974 35999999999999999999999999999999999999999999999999987543
Q ss_pred ---HHHHhcccEEEcCCCCCCc-ccHHHhcCCC----CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1125 ---LHDLRSRLSIIPQDPTMFE-GTVRNNLDPL----EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1125 ---~~~lr~~i~~vpQ~~~lf~-gTvr~Nl~~~----~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
...+|++++|+||++.+|. .|+++|+... ... .++++.++++.+++.+...+ ....|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADH-----------MPAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhc-----------Chhhc
Confidence 2356888999999998885 6999999642 111 13456777888877654433 34578
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ +.|+|++||+++.+.+ ||++++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 6899999999999976 99999999999999
Q ss_pred ecChhhHHhcCCChH
Q 000755 1270 YDSPTKLLENKSSSF 1284 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f 1284 (1300)
.|+++++.+.+...+
T Consensus 228 ~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 228 QGKPDEIFRQPKEER 242 (252)
T ss_pred eCCHHHHhcCCCcHH
Confidence 999999986654333
No 214
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.2e-38 Score=362.61 Aligned_cols=219 Identities=24% Similarity=0.352 Sum_probs=193.2
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
.+.|+++|+++. . .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++| +
T Consensus 37 ~~~l~i~nls~~--~--~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV--G--APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe--c--ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 457999999985 2 3599999999999999999999999999999999999999999999998 3
Q ss_pred cEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1132 LSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1132 i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..++.+.++.+.+.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997643344456677888889988888888899999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHH-HHhcCCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhcCCChHHHHH
Q 000755 1212 VLVLDEATASVDTATDNLIQQTL-RQHFSDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l-~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l~ 1288 (1300)
+|||||||++||+.+...+.+.+ ++..++.|||++||+++.+..||+|++|++|++++.|+++++.+. ...|.+.+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 256 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSKL 256 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHHH
Confidence 99999999999999999888754 555557899999999999888999999999999999999998854 23444333
No 215
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-39 Score=366.53 Aligned_cols=215 Identities=27% Similarity=0.436 Sum_probs=186.5
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999643456999999999999999999999999999999999999999999999999998777778899999
Q ss_pred EEcCCC--CCCcccHHHhcCCC---CCCCHH----HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1134 IIPQDP--TMFEGTVRNNLDPL---EEYKDE----EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1134 ~vpQ~~--~lf~gTvr~Nl~~~---~~~~d~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
|+||+| .++..|+++|+.+. ...+.+ .+.++++++++.+...+ ...+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHHHH
Confidence 999998 34567999998642 112332 35567788877655443 34678999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998653 4899999999999877999999999999999999988753
No 216
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-39 Score=360.77 Aligned_cols=219 Identities=26% Similarity=0.440 Sum_probs=188.3
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----cceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT-----AGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~-----~G~I~idg~di~~i--~~~ 1126 (1300)
.|+++|++++|+. +++|+|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 6899999999974 35999999999999999999999999999999999999997 69999999998643 345
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCCC---CC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|++++|+||++.+|+.|+++|+.+.. .. . ++.+.++++.+++.+.+.. .....+.+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 6788999999999999889999996421 11 1 2335556777777654332 244567889999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987567899999999999988 8999999999999999999997
Q ss_pred hcCC
Q 000755 1278 ENKS 1281 (1300)
Q Consensus 1278 ~~~~ 1281 (1300)
..+.
T Consensus 235 ~~~~ 238 (251)
T PRK14249 235 SRPR 238 (251)
T ss_pred hCCC
Confidence 6544
No 217
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3e-39 Score=376.63 Aligned_cols=213 Identities=25% Similarity=0.400 Sum_probs=184.2
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
..|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|+++
T Consensus 40 ~~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 40 VAIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eeEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 359999999999753 5999999999999999999999999999999999999999999999999987643 5678899
Q ss_pred EEEcCCCCCCc-ccHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1133 SIIPQDPTMFE-GTVRNNLDPLE---EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1133 ~~vpQ~~~lf~-gTvr~Nl~~~~---~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
+|+||++.++. .|+++|+..+. ..+. +.+.++++.+++.+.. +. ...+||+|||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-------~~----~~~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-------DA----RVSDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-------CC----ChhhCCHHHHHHHHHHH
Confidence 99999998875 59999996422 1222 2345667777765432 22 23579999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
||+.+|++|||||||+|||+.+...+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999865 47899999999999987 999999999999999999999754
No 218
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.9e-39 Score=357.59 Aligned_cols=479 Identities=20% Similarity=0.292 Sum_probs=301.4
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCeEEEEecCCcCCCCC
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGN 695 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~~ayv~Q~~~l~~~T 695 (1300)
+|.++|.+.+-. .+..+.|-||.|-.|..+++|||||-||||||+-|.----. |--+-.+-||.|+...-+.|
T Consensus 264 DIKiEnF~ISA~---Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~Rala----IPpnIDvLlCEQEvvad~t~ 336 (807)
T KOG0066|consen 264 DIKIENFDISAQ---GKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARALA----IPPNIDVLLCEQEVVADSTS 336 (807)
T ss_pred cceeeeeeeecc---cceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhcc----CCCCCceEeeeeeeeecCcH
Confidence 477777776643 45788999999999999999999999999999998743211 00122356788876655555
Q ss_pred HHHHHhcC---------------------CCCCHHHHHHHHH---Hhcc---hHHHhh--ccCCCcccccCCC-CCCCHH
Q 000755 696 IEDNILFG---------------------KPMDREKYDRVLE---ACSL---KKDLEI--LSFGDQTVIGERG-INLSGG 745 (1300)
Q Consensus 696 i~eNI~fg---------------------~~~~~~~~~~vl~---~~~l---~~dl~~--l~~Gd~t~ige~g-~~LSGG 745 (1300)
--+.|+-. ..-..++..++.+ +.+. +..... -..|..-++-++. ..+|||
T Consensus 337 Ai~tvl~aD~kRl~lLeee~~L~~q~e~Gd~taaErl~~v~~ELraiGA~sAEarARRILAGLGFskEMQ~rPt~kFSGG 416 (807)
T KOG0066|consen 337 AIDTVLKADKKRLALLEEEAKLMSQIEEGDTTAAERLKEVADELRAIGADSAEARARRILAGLGFSKEMQERPTTKFSGG 416 (807)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhccccchhHHHHHHhhcCCChhHhcCCccccCCc
Confidence 44444422 1111233333221 1111 111110 1134555555555 459999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEE-EecC
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKIT-QAGK 823 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~-~~g~ 823 (1300)
-|-||+||||||-.|.+|.|||||++||-...-++ ++.+.++ .||.++|+|+-.||.. |..|+.|++-++. +.|+
T Consensus 417 WRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWL-dNYLQgW--kKTLLIVSHDQgFLD~VCtdIIHLD~qkLhyYrGN 493 (807)
T KOG0066|consen 417 WRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWL-DNYLQGW--KKTLLIVSHDQGFLDSVCTDIIHLDNQKLHYYRGN 493 (807)
T ss_pred eeeehhHHHHHhcCceeeeecCCccccccceeeeh-hhHHhhh--hheeEEEecccchHHHHHHHHhhhhhhhhhhhcch
Confidence 99999999999999999999999999999875444 4444444 4899999999999987 9999999998876 6777
Q ss_pred hHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCccccccccchhhhhhhHHHHHHHH
Q 000755 824 YNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQTDKVDEQYYIPSARELSR 903 (1300)
Q Consensus 824 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s~D~v~~~~y~~~~r~l~r 903 (1300)
|.-+.+. |..-...+. +-|-..-++++.
T Consensus 494 Y~~FKKm---Y~Qk~~e~~-------------------------------------------------K~yekQeK~Lke 521 (807)
T KOG0066|consen 494 YTLFKKM---YAQKMQEHE-------------------------------------------------KNYEKQEKQLKE 521 (807)
T ss_pred HHHHHHH---HHHHHHHHH-------------------------------------------------HHHHHHHHHHHH
Confidence 7543221 111111111 011111112222
Q ss_pred HHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000755 904 LVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLISIP 983 (1300)
Q Consensus 904 l~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~ 983 (1300)
+...-+|.- . .|....+..........+.. .
T Consensus 522 lKa~GkS~K--------------q---AEkq~Ke~ltrKq~K~~~Kn--------------------------------q 552 (807)
T KOG0066|consen 522 LKAEGKSAK--------------Q---AEKQVKEQLTRKQKKGGKKN--------------------------------Q 552 (807)
T ss_pred HHhcCcchH--------------H---HHHHHHHHHHHHHHhccccc--------------------------------c
Confidence 211111100 0 00000000000000000000 0
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCCCCccccCCCCCCCCCCceEEEEeee
Q 000755 984 KGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCI--SSEPPLVIEESRPDCSWPTHGEVDILNLQ 1061 (1300)
Q Consensus 984 ~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~--~~e~~~~~~~~~~~~~wp~~g~i~~~~v~ 1061 (1300)
...-+.+. ---..|-.+|.-- -+|+ +. -....+-+.||+
T Consensus 553 ~dded~ga----------------------------pELL~RpKEY~VkF~FPep---------~~--L~PPvLGlH~Vt 593 (807)
T KOG0066|consen 553 NDDEDAGA----------------------------PELLQRPKEYSVKFQFPEP---------TK--LNPPVLGLHDVT 593 (807)
T ss_pred CccccccC----------------------------HHHHhCchheEEEEecCCC---------CC--CCCCeeeccccc
Confidence 00000000 0001233333210 0111 11 112357789999
Q ss_pred eeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCC-
Q 000755 1062 VRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPT- 1140 (1300)
Q Consensus 1062 ~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~- 1140 (1300)
|.|+... |.+++++|-|.--.+|+||||||.|||||+++|.|-++|..|+..-+- |-+||+..|...
T Consensus 594 Fgy~gqk-pLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKnh-----------rL~iG~FdQh~~E 661 (807)
T KOG0066|consen 594 FGYPGQK-PLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKNH-----------RLRIGWFDQHANE 661 (807)
T ss_pred ccCCCCC-chhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhccc-----------eeeeechhhhhHH
Confidence 9997654 589999999999999999999999999999999999999999765432 457899888753
Q ss_pred -C-CcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 000755 1141 -M-FEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEA 1218 (1300)
Q Consensus 1141 -l-f~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEp 1218 (1300)
| -+.|--+.|.-.-...-++.+..|...||...... -....|||||+-|++||-.-++.|+|||||||
T Consensus 662 ~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAHT----------ikikdLSGGQKaRValaeLal~~PDvlILDEP 731 (807)
T KOG0066|consen 662 ALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAHT----------IKIKDLSGGQKARVALAELALGGPDVLILDEP 731 (807)
T ss_pred hhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccce----------EeeeecCCcchHHHHHHHHhcCCCCEEEecCC
Confidence 2 23366666643334455667778888877543211 12356999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccC-EEEEEeCCEEE
Q 000755 1219 TASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSD-MVLLLSHGIIE 1268 (1300)
Q Consensus 1219 Ts~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D-~v~vl~~G~i~ 1268 (1300)
|++||.++...+-++|+++ ...||+|||+-..|...| ..+|+++-.|-
T Consensus 732 TNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~ 780 (807)
T KOG0066|consen 732 TNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGID 780 (807)
T ss_pred CCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChh
Confidence 9999999999999999987 568999999988886522 35555554443
No 219
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=357.03 Aligned_cols=203 Identities=28% Similarity=0.401 Sum_probs=173.2
Q ss_pred EEEEeEEEEecCC--CCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------
Q 000755 617 IEIVDGNFAWDIS--SNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~--~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 680 (1300)
|+++++++.|... ....+|+||||+|++||+.+|+|.||+|||||+++|.++-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999752 124689999999999999999999999999999999999999999999999
Q ss_pred --eEEEEecCCcCCC-CCHHHHHhcCCC---CC-HHHHHHH---HHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 681 --TKAYVAQSPWIQS-GNIEDNILFGKP---MD-REKYDRV---LEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 681 --~~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~-~~~~~~v---l~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
.|++++|++-+++ .||.+||.|..+ ++ .+..++| ++..+|.+.. +....+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~-----------~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKA-----------DRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------ccCchhcCcchhhHH
Confidence 3699999999987 799999999754 22 3333444 4445555433 344579999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh--cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL--LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~--l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
+|||||..+|+|||.|||||||||+|.+.|.+ ++... --|-|+++|||.++.++. |||+.||++|++++.|+..++
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~-LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILE-LLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHH-HHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 99999999999999999999999999999986 44332 237899999999999987 999999999999999999998
Q ss_pred HhcC
Q 000755 828 LNSG 831 (1300)
Q Consensus 828 ~~~~ 831 (1300)
....
T Consensus 230 F~~P 233 (339)
T COG1135 230 FANP 233 (339)
T ss_pred hcCc
Confidence 7654
No 220
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.6e-39 Score=359.72 Aligned_cols=211 Identities=25% Similarity=0.437 Sum_probs=181.2
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hcccE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRLS 1133 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i~ 1133 (1300)
++++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 478999999974 359999999999999999999999999999999999999999999999999987766553 56799
Q ss_pred EEcCCCCCCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
|+||++.+|.+ |+++|+... .... ++++.++++.+++.+. ......+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHL-----------RKSKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHHHHH
Confidence 99999999987 999998632 1112 1234556666665433 333456799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
++.+|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999998865 37899999999998877 99999999999999999998864
No 221
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-39 Score=360.22 Aligned_cols=219 Identities=25% Similarity=0.408 Sum_probs=188.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i--~~~ 1126 (1300)
.++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 6899999999974 3599999999999999999999999999999999999985 799999999998653 344
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCCC---CC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
..|++++|+||++.+|+.|+++|+.+.. .. . .+++.++++.+++.+.+.. ........||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHHH
Confidence 6788899999999999999999996421 11 1 2345678888887543322 123456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++||||++++|+||||||||++||+.+...+.+.|++..++.|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999887 9999999999999999999998
Q ss_pred hcCC
Q 000755 1278 ENKS 1281 (1300)
Q Consensus 1278 ~~~~ 1281 (1300)
.++.
T Consensus 235 ~~~~ 238 (251)
T PRK14270 235 LEPQ 238 (251)
T ss_pred cCCC
Confidence 6543
No 222
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-39 Score=363.34 Aligned_cols=224 Identities=28% Similarity=0.465 Sum_probs=188.6
Q ss_pred CCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--
Q 000755 1050 PTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS-- 1122 (1300)
Q Consensus 1050 p~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~-- 1122 (1300)
|....++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++..
T Consensus 20 ~~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 97 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGED--HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKS 97 (271)
T ss_pred CCceEEEEeeeEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccc
Confidence 334479999999999753 59999999999999999999999999999999999997 699999999999853
Q ss_pred CCHHHHhcccEEEcCCCCCCcccHHHhcCCC---CCCCH-----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCCh
Q 000755 1123 IGLHDLRSRLSIIPQDPTMFEGTVRNNLDPL---EEYKD-----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSM 1194 (1300)
Q Consensus 1123 i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~~~d-----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSg 1194 (1300)
.+...+|++++|+||++.+|..|+++|+.+. ....+ +.+.++++..++.+.+ .......+.+|||
T Consensus 98 ~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSg 170 (271)
T PRK14238 98 YSVEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSG 170 (271)
T ss_pred ccHHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCH
Confidence 3456678899999999999988999999632 12221 2234556666543322 2233456678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecCh
Q 000755 1195 GQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1195 GqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~ 1273 (1300)
|||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++
T Consensus 171 Ge~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 250 (271)
T PRK14238 171 GQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDT 250 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667999999999999887 999999999999999999
Q ss_pred hhHHhcCCC
Q 000755 1274 TKLLENKSS 1282 (1300)
Q Consensus 1274 ~~l~~~~~~ 1282 (1300)
+++.+++..
T Consensus 251 ~~~~~~~~~ 259 (271)
T PRK14238 251 DKIFSNPSD 259 (271)
T ss_pred HHHHcCCCC
Confidence 999876543
No 223
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-39 Score=368.05 Aligned_cols=216 Identities=26% Similarity=0.429 Sum_probs=189.1
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCc---ceEEECCeecCCCCHHHHh
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTA---GEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~---G~I~idg~di~~i~~~~lr 1129 (1300)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999997543459999999999999999999999999999999999999998 8999999999877777788
Q ss_pred cccEEEcCCC--CCCcccHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1130 SRLSIIPQDP--TMFEGTVRNNLDPL---EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1130 ~~i~~vpQ~~--~lf~gTvr~Nl~~~---~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
++++|+||+| .+++.|+++|+.+. ...+. +++.++++.+++.+.....+ .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 8999999998 35678999999642 12233 34677888888876554443 57899999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHh
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
+|||||+.+|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998653 689999999999997799999999999999999998875
Q ss_pred c
Q 000755 1279 N 1279 (1300)
Q Consensus 1279 ~ 1279 (1300)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 224
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-39 Score=372.21 Aligned_cols=224 Identities=25% Similarity=0.371 Sum_probs=189.1
Q ss_pred eEEEEeeeeeeCCC--------CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH
Q 000755 1054 EVDILNLQVRYAPH--------LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL 1125 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~--------~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~ 1125 (1300)
.|+++|+++.|+.. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2368999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhcccEEEcCCCC--CCcc-cHHHhcCC----CCCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCC
Q 000755 1126 H---DLRSRLSIIPQDPT--MFEG-TVRNNLDP----LEEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGEN 1191 (1300)
Q Consensus 1126 ~---~lr~~i~~vpQ~~~--lf~g-Tvr~Nl~~----~~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~ 1191 (1300)
. .+|++++||||+|. +++. |+.+|+.. ..... .+++.++++.+++.+.. ++ .....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~------~~----~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEH------YD----RYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHH------hc----CCCcc
Confidence 4 46778999999994 5543 88888741 11122 24567889999885321 22 23467
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEE
Q 000755 1192 WSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIE 1268 (1300)
Q Consensus 1192 LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~ 1268 (1300)
||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988643 7899999999999987 9999999999999
Q ss_pred EecChhhHHhcCCChHHHH
Q 000755 1269 EYDSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1269 e~g~~~~l~~~~~~~f~~l 1287 (1300)
|.|+++++++++...|.+.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EECCHHHHhcCCCCHHHHH
Confidence 9999999998765555543
No 225
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=360.70 Aligned_cols=223 Identities=24% Similarity=0.427 Sum_probs=192.0
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~i--~~~ 1126 (1300)
.++++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.+++.. +..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 4789999999974 359999999999999999999999999999999999975 4899999999998653 456
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCC---CC-CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPL---EE-YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~-~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.+|++++|+||++.+|..|+++|+... .. .+ ++.+.++++.+++.+.+... ....+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHHH
Confidence 778899999999999999999999642 11 11 23466778888887655432 23456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999988 9999999999999999999998
Q ss_pred hcCCChHH
Q 000755 1278 ENKSSSFA 1285 (1300)
Q Consensus 1278 ~~~~~~f~ 1285 (1300)
+.+...+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14266 234 INPKDKRT 241 (250)
T ss_pred hCCCChHH
Confidence 76655543
No 226
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=355.33 Aligned_cols=217 Identities=26% Similarity=0.407 Sum_probs=191.3
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCe---ecCCCCHHHHhc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGI---NISSIGLHDLRS 1130 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~---di~~i~~~~lr~ 1130 (1300)
.|+++|+++.|+.. .+++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++...+ .+
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 47888999988764 5899999999999999999999999999999999999999999999999 77664433 36
Q ss_pred ccEEEcCCCCCCc-ccHHHhcCCCCC---------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1131 RLSIIPQDPTMFE-GTVRNNLDPLEE---------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~-gTvr~Nl~~~~~---------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
+||+|+|+..+|. .||.+|+.+.-. ..+..+.+.|+.|+|...-++.| ..||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 7999999999986 599999976431 23456777899999987776666 45799999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
||||||..+|++|+||||.++||..-...+.+-|++... +.|+++||||.+++.. ||||+||++|+|...|+|+|+.
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999999999999999999999999988543 7899999999999988 9999999999999999999999
Q ss_pred hcCCChHH
Q 000755 1278 ENKSSSFA 1285 (1300)
Q Consensus 1278 ~~~~~~f~ 1285 (1300)
..+.+.|-
T Consensus 227 ~~P~s~fV 234 (345)
T COG1118 227 DHPASRFV 234 (345)
T ss_pred cCCCccce
Confidence 98888764
No 227
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.9e-39 Score=359.40 Aligned_cols=213 Identities=23% Similarity=0.383 Sum_probs=183.1
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC--HHHHhccc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG--LHDLRSRL 1132 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~--~~~lr~~i 1132 (1300)
++++|++++|++ +++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999974 35999999999999999999999999999999999999999999999999987643 34567889
Q ss_pred EEEcCCCCCCc-ccHHHhcCCCC----CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPTMFE-GTVRNNLDPLE----EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~lf~-gTvr~Nl~~~~----~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
+|+||++.+|. .|+++|+.+.. ... ++.+.++++..++.+...+ ....||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHH-----------YPSELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhc-----------ChhhcCHHHHHHHHHH
Confidence 99999998886 59999986421 111 2345567777776544333 3467899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
||++++|++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998864 37899999999999976 9999999999999999999987654
No 228
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-39 Score=365.98 Aligned_cols=213 Identities=24% Similarity=0.410 Sum_probs=184.3
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC-HHHHhcccE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG-LHDLRSRLS 1133 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~-~~~lr~~i~ 1133 (1300)
++++|++++|++. +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ...++++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 35999999999999999999999999999999999999999999999999997765 356788999
Q ss_pred EEcCCCC--CCcccHHHhcCCCCC---CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1134 IIPQDPT--MFEGTVRNNLDPLEE---YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1134 ~vpQ~~~--lf~gTvr~Nl~~~~~---~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
|+||+|. ++..|+++|+.+... .+ ++.+.++++.+++.+.... .+..||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHR-----------SPKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------CcccCCHHHHHHHHHHH
Confidence 9999985 566799999964321 22 3346677888877654333 34578999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
||+++|+||||||||++||+.+...+.+.|++.. ++.|||++||+++.+..||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998864 47899999999999977999999999999999999998653
No 229
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.8e-39 Score=372.08 Aligned_cols=212 Identities=25% Similarity=0.374 Sum_probs=182.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGDK--VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCCe--EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 58999999999753 599999999999999999999999999999999999999999999999998653 356788999
Q ss_pred EEcCCCCCCc-ccHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTMFE-GTVRNNLDPL---EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~lf~-gTvr~Nl~~~---~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
|+||++.++. .|+++|+... ...+. +.+.++++.+++.+.. +. ....||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-------~~----~~~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-------DV----RVALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-------cC----chhhCCHHHHHHHHHHHH
Confidence 9999998885 5999998632 11232 2345567777765432 22 235799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|+.+|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47899999999999987 999999999999999999998754
No 230
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=335.33 Aligned_cols=212 Identities=24% Similarity=0.385 Sum_probs=186.9
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
+++.+++++|++. ..+++||||+++.||++||.|+|||||||++++|..++.|++|+|++||.|+... +...|++||+
T Consensus 2 l~v~~l~K~y~~~-v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGSK-VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccCH-HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcce
Confidence 6889999999873 3489999999999999999999999999999999999999999999999999765 4667899999
Q ss_pred EcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
++-+.-++.. |+||||.++. +.+ ..++.+..+..++.+...+.. .+||-|+|||++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv-----------~~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRV-----------GEFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHH-----------hhhchhhHHHHHHHHHH
Confidence 9977777754 9999997653 223 345667777778777765543 35799999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
.++|+++||||||||||..+...+++.|++... +++||+.||.+++++. ||||+++++|+++..|+++++.+.
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999999998765 8999999999999997 999999999999999999999764
No 231
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-39 Score=361.01 Aligned_cols=225 Identities=25% Similarity=0.421 Sum_probs=190.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i--~~~ 1126 (1300)
.|+++|++++|++ +.+|+|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999964 3599999999999999999999999999999999999763 489999999998765 445
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCCCC----CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPLEE----YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~----~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
..|++++|+||++.+|+.|+++|+.+... .. ++.+.++++.+++.+.+. +.....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHHH
Confidence 67888999999999998999999974311 11 234566777777654332 2244566789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++||||++.+|+++||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999976 9999999999999999999998
Q ss_pred hcCCChHHHH
Q 000755 1278 ENKSSSFAQL 1287 (1300)
Q Consensus 1278 ~~~~~~f~~l 1287 (1300)
+++...+.+.
T Consensus 237 ~~~~~~~~~~ 246 (253)
T PRK14261 237 ENPHEELTEN 246 (253)
T ss_pred hCCCcHHHHH
Confidence 6654444443
No 232
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5e-39 Score=354.76 Aligned_cols=203 Identities=27% Similarity=0.403 Sum_probs=173.8
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---Hh
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---LR 1129 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---lr 1129 (1300)
++++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++..+ +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996421 35999999999999999999999999999999999999999999999999998876554 33
Q ss_pred -cccEEEcCCCCCCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1130 -SRLSIIPQDPTMFE-GTVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1130 -~~i~~vpQ~~~lf~-gTvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
++++|+||++.+|+ .|+++|+... .... .+++.++++.+++.+...+ ....||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINH-----------RPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHH
Confidence 67999999999886 4999998641 1122 2346677777777544333 3357899999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhccCEEEEEeCCEEE
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGIIE 1268 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~ 1268 (1300)
+|||||+++|++|||||||++||+.+...+.+.|++.. .++|||++||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999864 368999999999999889999999999985
No 233
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=363.60 Aligned_cols=222 Identities=27% Similarity=0.436 Sum_probs=190.8
Q ss_pred CCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCC--C
Q 000755 1051 THGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISS--I 1123 (1300)
Q Consensus 1051 ~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~--i 1123 (1300)
..+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 22 ~~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3457999999999965 3599999999999999999999999999999999999884 89999999999864 3
Q ss_pred CHHHHhcccEEEcCCCCCCcccHHHhcCCC---CCC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChh
Q 000755 1124 GLHDLRSRLSIIPQDPTMFEGTVRNNLDPL---EEY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMG 1195 (1300)
Q Consensus 1124 ~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgG 1195 (1300)
+...+|++++|+||++.+|..|+++|+.+. ... . ++.+.++++.+++.+.+.. .....+.+||+|
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHH
Confidence 455678899999999999988999998642 111 1 2346778888887654332 234556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChh
Q 000755 1196 QRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPT 1274 (1300)
Q Consensus 1196 qrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~ 1274 (1300)
||||++|||||+++|++|||||||++||+.+...+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999987667899999999999876 9999999999999999999
Q ss_pred hHHhcCC
Q 000755 1275 KLLENKS 1281 (1300)
Q Consensus 1275 ~l~~~~~ 1281 (1300)
++.+++.
T Consensus 253 ~~~~~~~ 259 (272)
T PRK14236 253 TLFTSPA 259 (272)
T ss_pred HHhcCCC
Confidence 9986543
No 234
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.8e-38 Score=405.53 Aligned_cols=353 Identities=22% Similarity=0.329 Sum_probs=238.9
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHccCC--CEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccccCCEEE
Q 000755 735 IGERGINLSGGQKQRIQIARALYQDA--DIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPAADLIL 811 (1300)
Q Consensus 735 ige~g~~LSGGQkqRiaLARAly~~~--~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~~d~i~ 811 (1300)
.+....+|||||||||+|||||..+| ++|||||||++||++....+++ .+..+ .+|+|||+|+|+++.+..||+|+
T Consensus 483 l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~-~L~~L~~~G~TVIvVeH~~~~i~~aD~vi 561 (943)
T PRK00349 483 LSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIE-TLKHLRDLGNTLIVVEHDEDTIRAADYIV 561 (943)
T ss_pred CCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhCCEEE
Confidence 47788899999999999999999997 9999999999999999999876 44444 35899999999999998899999
Q ss_pred EE------eCCeEEEecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCcccccc
Q 000755 812 VM------KDGKITQAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQ 885 (1300)
Q Consensus 812 ~l------~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s 885 (1300)
+| ++|+|+..|+++++.........
T Consensus 562 ~LgpgaG~~~G~iv~~g~~~e~~~~~~~l~~------------------------------------------------- 592 (943)
T PRK00349 562 DIGPGAGVHGGEVVASGTPEEIMKNPNSLTG------------------------------------------------- 592 (943)
T ss_pred EeccccCCCCCEEeeccCHHHHhcChhheee-------------------------------------------------
Confidence 99 99999999998887532100000
Q ss_pred ccchhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 000755 886 TDKVDEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLD 965 (1300)
Q Consensus 886 ~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 965 (1300)
. |+
T Consensus 593 ------~-~l---------------------------------------------------------------------- 595 (943)
T PRK00349 593 ------Q-YL---------------------------------------------------------------------- 595 (943)
T ss_pred ------h-hh----------------------------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCC
Q 000755 966 MLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRP 1045 (1300)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~ 1045 (1300)
.+.. . ...+.. ..+
T Consensus 596 ------------------~~~~-------------------------------------~----~~~~~~-------~~~ 609 (943)
T PRK00349 596 ------------------SGKK-------------------------------------K----IEVPKE-------RRK 609 (943)
T ss_pred ------------------cccc-------------------------------------c----cccccc-------ccC
Confidence 0000 0 000000 000
Q ss_pred CCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHh---------cCCCCCcceEEEC
Q 000755 1046 DCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLF---------RIVEPTAGEIVID 1116 (1300)
Q Consensus 1046 ~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~---------gl~~p~~G~I~id 1116 (1300)
+..+.++++|++. ..|+|+|++|++||++||+|+||||||||++-++ +...+..+...++
T Consensus 610 ----~~~~~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~ 678 (943)
T PRK00349 610 ----GNGKFLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIE 678 (943)
T ss_pred ----CCcceEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccc
Confidence 1123588888862 2599999999999999999999999999998764 1111223333333
Q ss_pred Ce------------ecCC---------CC-HHHHhccc---------EEEcCCCCCCc-----------ccHHHhcCCCC
Q 000755 1117 GI------------NISS---------IG-LHDLRSRL---------SIIPQDPTMFE-----------GTVRNNLDPLE 1154 (1300)
Q Consensus 1117 g~------------di~~---------i~-~~~lr~~i---------~~vpQ~~~lf~-----------gTvr~Nl~~~~ 1154 (1300)
|. ++.. .+ ...+|.-+ +|-++.-.+.. |++..|+.+..
T Consensus 679 g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~ 758 (943)
T PRK00349 679 GLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLP 758 (943)
T ss_pred cccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCC
Confidence 32 2210 00 11223322 22222211111 23443332211
Q ss_pred C------------------------CCHH-----HHHHHHHHc----CCcHHHHhh-cCCCcc-ccccCCCCCChhHHHH
Q 000755 1155 E------------------------YKDE-----EIWEALDKC----QLGDEVRNK-EGKLDS-RVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1155 ~------------------------~~d~-----~i~~~l~~~----~l~~~i~~~-~~gLdt-~v~e~G~~LSgGqrQr 1199 (1300)
+ .+-. .+.++++.. .+.+..+.+ .-||+. .++.....||||||||
T Consensus 759 ~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQR 838 (943)
T PRK00349 759 DVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQR 838 (943)
T ss_pred CccccCccccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHH
Confidence 1 0111 122222221 010000000 124544 3567778999999999
Q ss_pred HHHHHHHccCC---CEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEE------eCCEEEE
Q 000755 1200 VCLGRVLLKKS---KVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLL------SHGIIEE 1269 (1300)
Q Consensus 1200 l~LARall~~~---~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl------~~G~i~e 1269 (1300)
+.|||+|+++| +++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++
T Consensus 839 l~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~ 918 (943)
T PRK00349 839 VKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVA 918 (943)
T ss_pred HHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEE
Confidence 99999999999 9999999999999999999999998865 478999999999999889999999 7999999
Q ss_pred ecChhhHHhcCCChHHHHHHHH
Q 000755 1270 YDSPTKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f~~l~~~~ 1291 (1300)
.|+|+++.+++.+.=.+.+..+
T Consensus 919 ~Gt~~el~~~~~s~t~~~l~~~ 940 (943)
T PRK00349 919 TGTPEEVAKVEASYTGRYLKPV 940 (943)
T ss_pred eCCHHHHHhCcccHHHHHHHHH
Confidence 9999999987766555555443
No 235
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-39 Score=362.26 Aligned_cols=221 Identities=27% Similarity=0.417 Sum_probs=188.9
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCC--CCH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISS--IGL 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~--i~~ 1125 (1300)
+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 36999999999975 3599999999999999999999999999999999999985 48999999999854 344
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCCC----CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPLE----EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~----~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
..+|.+++|+||++.+|+.|+++|+.+.. ... ++.+.++++.+++.+.+.. .....+..||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 56788999999999999999999986321 112 2345677888888654332 12345678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEe-----CCEEEEec
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLS-----HGIIEEYD 1271 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~-----~G~i~e~g 1271 (1300)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999987667899999999999987 99999998 59999999
Q ss_pred ChhhHHhcCCC
Q 000755 1272 SPTKLLENKSS 1282 (1300)
Q Consensus 1272 ~~~~l~~~~~~ 1282 (1300)
+++++.+++..
T Consensus 237 ~~~~~~~~~~~ 247 (259)
T PRK14260 237 VTTQIFSNPLD 247 (259)
T ss_pred CHHHHhcCCCC
Confidence 99999865543
No 236
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=378.36 Aligned_cols=219 Identities=23% Similarity=0.388 Sum_probs=190.6
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
...++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.+||.++...+. .|++
T Consensus 17 ~~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 17 TPLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred CceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 346999999999975 358999999999999999999999999999999999999999999999999987654 4678
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+||++.+|+. ||++|+.+.. ..+ .+++.++++.+++.+...+.| .+||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999999976 9999997431 122 235667888888876554443 46899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
|||+++|++|+|||||++||..+.+.+.+.|++.. .+.|+|++||+++++.. ||||++|++|++++.|+|+++..++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998887754 26899999999999877 9999999999999999999999887
Q ss_pred CChHH
Q 000755 1281 SSSFA 1285 (1300)
Q Consensus 1281 ~~~f~ 1285 (1300)
...|.
T Consensus 242 ~~~~~ 246 (377)
T PRK11607 242 TTRYS 246 (377)
T ss_pred ccHHH
Confidence 76554
No 237
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-39 Score=365.06 Aligned_cols=212 Identities=28% Similarity=0.398 Sum_probs=186.7
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC-----------CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE-----------EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~-----------~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
|+||++.++.+ |+++|+.... ...++++.++++.+++.+.....+ .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHHH
Confidence 99999877665 9999986321 012345778899988865444332 468999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999998864 27899999999999976 99999999999999999998864
No 238
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.2e-39 Score=360.18 Aligned_cols=215 Identities=26% Similarity=0.397 Sum_probs=184.0
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC--------H
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG--------L 1125 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~--------~ 1125 (1300)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHGQ--TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 48999999999753 5999999999999999999999999999999999999999999999999986532 2
Q ss_pred HHHhcccEEEcCCCCCCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhH
Q 000755 1126 HDLRSRLSIIPQDPTMFE-GTVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~-gTvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
..+|++++|+||++.+|. .|+++|+... .... .+.+.++++.+++.+.. .....+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-----------TSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----------hCChhhCChHH
Confidence 456788999999998886 5999998531 1122 23356667777765432 23457899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChh
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPT 1274 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~ 1274 (1300)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999988653 7899999999999987 9999999999999999999
Q ss_pred hHHhcCC
Q 000755 1275 KLLENKS 1281 (1300)
Q Consensus 1275 ~l~~~~~ 1281 (1300)
++.+.+.
T Consensus 230 ~~~~~~~ 236 (250)
T PRK11264 230 ALFADPQ 236 (250)
T ss_pred HHhcCCC
Confidence 9876543
No 239
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.1e-39 Score=363.22 Aligned_cols=224 Identities=26% Similarity=0.362 Sum_probs=186.1
Q ss_pred eEEEEeeeeeeCCC-------CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH
Q 000755 1054 EVDILNLQVRYAPH-------LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~-------~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~ 1126 (1300)
.|+++||+++|++. ...+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999631 34699999999999999999999999999999999999999999999999999877654
Q ss_pred H---HhcccEEEcCCCC--CCc-ccHHHhcCC----CCCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1127 D---LRSRLSIIPQDPT--MFE-GTVRNNLDP----LEEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1127 ~---lr~~i~~vpQ~~~--lf~-gTvr~Nl~~----~~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
+ +|++++|+||++. ++. .|+++|+.. .... .++++.++++.+++.+.. ....+.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED----------ADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh----------hhCChhhC
Confidence 3 5778999999983 443 599999842 1111 234566778888774221 22345679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|||||||++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||++||+++.+.. ||++++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999986 99999999999999
Q ss_pred ecChhhHHhcCCChHHHH
Q 000755 1270 YDSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f~~l 1287 (1300)
.|+++++...++...+.+
T Consensus 232 ~g~~~~~~~~~~~~~~~~ 249 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGRNL 249 (265)
T ss_pred ECCHHHHcCCCCHHHHHH
Confidence 999999986433333333
No 240
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-39 Score=379.33 Aligned_cols=204 Identities=26% Similarity=0.430 Sum_probs=178.5
Q ss_pred cceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH----hcccEEEcCCCCCCcc-
Q 000755 1070 LVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL----RSRLSIIPQDPTMFEG- 1144 (1300)
Q Consensus 1070 ~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l----r~~i~~vpQ~~~lf~g- 1144 (1300)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988876554 3579999999999875
Q ss_pred cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000755 1145 TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1217 (1300)
Q Consensus 1145 Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDE 1217 (1300)
|+++|+.+.. ... ++++.++++.+++.++..+.| .+||||||||++|||||+.+|++|||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 9999996421 122 345677899998876655444 4789999999999999999999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCChH
Q 000755 1218 ATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSSSF 1284 (1300)
Q Consensus 1218 pTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~~f 1284 (1300)
||++||+.+.+.+++.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++++++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999998864 37899999999999877 99999999999999999999987665444
No 241
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-39 Score=356.52 Aligned_cols=203 Identities=26% Similarity=0.328 Sum_probs=175.1
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997521 369999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEcCCCCCCc-ccHHHhcCCCC---CC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1133 SIIPQDPTMFE-GTVRNNLDPLE---EY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1133 ~~vpQ~~~lf~-gTvr~Nl~~~~---~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
+|+||++.+|. .|+++|+.... .. .++++.++++.+++.+...+.+ .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999887 59999986321 11 2345777888888866544433 568999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEe--CCEEEEecCh
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLS--HGIIEEYDSP 1273 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~--~G~i~e~g~~ 1273 (1300)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999998864 36899999999998876 99999999 7999988764
No 242
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=341.74 Aligned_cols=216 Identities=25% Similarity=0.413 Sum_probs=187.6
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hcc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSR 1131 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~ 1131 (1300)
+.+..+|+.++|... +|++||||++++||+||+.|||||||||.+.++.|+++|++|+|.+||.||+.++.+.. |..
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 468899999999764 69999999999999999999999999999999999999999999999999999998874 557
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCCCCC---------CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPLEEY---------KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~~~~---------~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
|||+||||.+|.+ ||++|+...-+. ..+++.+.|+..++... -...+..||||||+|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hl-----------r~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHL-----------RDSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHH-----------hcCcccccccchHHHHH
Confidence 9999999999987 999998632211 11234456666665433 22346789999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||||..+|+.++||||+||+||-+-..|++.|+... ++-.|++.-|+..+..+ |||.+++.+|+|...|+|+++.++
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999999875 47789999999877766 999999999999999999999987
Q ss_pred CC
Q 000755 1280 KS 1281 (1300)
Q Consensus 1280 ~~ 1281 (1300)
+.
T Consensus 230 ~~ 231 (243)
T COG1137 230 ED 231 (243)
T ss_pred hh
Confidence 53
No 243
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.1e-39 Score=370.54 Aligned_cols=211 Identities=23% Similarity=0.348 Sum_probs=186.3
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999974 359999999999999999999999999999999999999999999999999876 34577889999
Q ss_pred EcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|++ |+++|+.+.. ... .+++.++++.+++.+... ....+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQH-----------KKIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhc-----------CchhhCCHHHHHHHHHHHHH
Confidence 9999999876 9999986321 122 345667788887765433 23467999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
+++|++|+|||||+|||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++..+
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999988778999999999999988 999999999999999999998653
No 244
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.9e-39 Score=354.60 Aligned_cols=202 Identities=24% Similarity=0.397 Sum_probs=174.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 4789999999753 599999999999999999999999999999999999999999999999998765432 467999
Q ss_pred EcCCCCCCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFE-GTVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|. .|+++|+... .... ++++.++++.+++.+..... ..+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRK-----------PKQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 999999885 5999998642 1122 23456678888876554433 357899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
+++|++++|||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999999887 9999999999999876
No 245
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=361.62 Aligned_cols=220 Identities=24% Similarity=0.461 Sum_probs=188.7
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS--IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~--i~~~ 1126 (1300)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 59999999999753 59999999999999999999999999999999999986 489999999998853 3456
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCCC---CC---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
.+|++++|+||++.+|+.|+++|+.+.. .. .++++.++++.+++.+.+.. .....+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHHH
Confidence 6788999999999999889999986421 11 12345667788887654432 23445678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEe---------CCEEEEe
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLS---------HGIIEEY 1270 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~---------~G~i~e~ 1270 (1300)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999987667899999999999987 99999998 8999999
Q ss_pred cChhhHHhcCCC
Q 000755 1271 DSPTKLLENKSS 1282 (1300)
Q Consensus 1271 g~~~~l~~~~~~ 1282 (1300)
|+++++.+++..
T Consensus 241 ~~~~~~~~~~~~ 252 (264)
T PRK14243 241 DRTEKIFNSPQQ 252 (264)
T ss_pred CCHHHHHhCCCc
Confidence 999999876543
No 246
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=364.05 Aligned_cols=221 Identities=25% Similarity=0.459 Sum_probs=188.9
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCC--CC
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISS--IG 1124 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~--i~ 1124 (1300)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 37 ~~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 37 ETVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 446999999999975 359999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcccEEEcCCCCCCcccHHHhcCCCC---C---CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1125 LHDLRSRLSIIPQDPTMFEGTVRNNLDPLE---E---YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1125 ~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~---~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
...+|++++|+||++.+|..|+++|+.... . ..+++++++++.+++...+.. .....+.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 556788999999999999889999986321 1 124467788888887543322 123455789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEE-EEeCCEEEEecChhhH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVL-LLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~-vl~~G~i~e~g~~~~l 1276 (1300)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999988767899999999999987 99975 5799999999999998
Q ss_pred HhcCC
Q 000755 1277 LENKS 1281 (1300)
Q Consensus 1277 ~~~~~ 1281 (1300)
.+++.
T Consensus 268 ~~~~~ 272 (285)
T PRK14254 268 FENPE 272 (285)
T ss_pred HhCcC
Confidence 86543
No 247
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.6e-39 Score=354.48 Aligned_cols=200 Identities=30% Similarity=0.448 Sum_probs=172.5
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEE
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSII 1135 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~v 1135 (1300)
+++|++++|++...++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36899999975324599999999999999999999999999999999999999999999999999877777888899999
Q ss_pred cCCCC--CCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1136 PQDPT--MFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1136 pQ~~~--lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
||++. ++..|+++|+.... ... ++++.++++..++.+...+ ....||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDR-----------SPFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHHHHHH
Confidence 99984 56789999986421 122 2345667787777554333 3467999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCE
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGI 1266 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~ 1266 (1300)
+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999988653 7899999999999988 99999999985
No 248
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-39 Score=362.22 Aligned_cols=223 Identities=23% Similarity=0.394 Sum_probs=191.6
Q ss_pred CCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecC---
Q 000755 1050 PTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINIS--- 1121 (1300)
Q Consensus 1050 p~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~--- 1121 (1300)
|..+.|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 567889999999999753 599999999999999999999999999999999999985 7999999998774
Q ss_pred -CCCHHHHhcccEEEcCCCCCCcccHHHhcCCCC---C-----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1122 -SIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLE---E-----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1122 -~i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~-----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
......+|++++|+||++.+|.+|+++|+.... . ..++++.++++.+++.+.+. ........+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccC
Confidence 233456788999999999999899999996421 1 12356777888887754332 2334456789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
|+|||||++|||||+++|+++||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999987667899999999999986 9999999999999999
Q ss_pred ChhhHHhcCC
Q 000755 1272 SPTKLLENKS 1281 (1300)
Q Consensus 1272 ~~~~l~~~~~ 1281 (1300)
+++++..++.
T Consensus 243 ~~~~~~~~~~ 252 (265)
T PRK14252 243 ATDTIFIKPK 252 (265)
T ss_pred CHHHHHhCCC
Confidence 9999976543
No 249
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-39 Score=358.68 Aligned_cols=213 Identities=22% Similarity=0.325 Sum_probs=181.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC------CCHHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS------IGLHD 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~------i~~~~ 1127 (1300)
.++++|++++|++ +++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .....
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999975 359999999999999999999999999999999999999999999999998731 22346
Q ss_pred HhcccEEEcCCCCCCcc-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1128 LRSRLSIIPQDPTMFEG-TVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.|++++|+||++.+|.+ |+++|+... .... .+++.++++.+++.+...+ ...+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADR-----------FPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHH
Confidence 68899999999999875 999998521 1112 2345666777776554433 33578999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
|++||||++++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999865 37899999999999976 999999999999999999887
Q ss_pred Hhc
Q 000755 1277 LEN 1279 (1300)
Q Consensus 1277 ~~~ 1279 (1300)
.+.
T Consensus 229 ~~~ 231 (242)
T PRK11124 229 TQP 231 (242)
T ss_pred cCc
Confidence 643
No 250
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-39 Score=365.32 Aligned_cols=215 Identities=24% Similarity=0.377 Sum_probs=188.0
Q ss_pred eEEEEeeeeeeCCC-CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1054 EVDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~-~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999999743 24599999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEEcCCCC--CCcccHHHhcCCC---CCCCHH----HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPT--MFEGTVRNNLDPL---EEYKDE----EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~--lf~gTvr~Nl~~~---~~~~d~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
+|+||+|. ++..|+.+|+.+. ...+++ .+.++++.+++.++... ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 99999983 6678999999642 122332 35677888888665443 2357899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||+++|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|++++++.+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999988653 7899999999999988999999999999999999998753
No 251
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.8e-39 Score=354.94 Aligned_cols=200 Identities=24% Similarity=0.352 Sum_probs=174.1
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH---HHhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH---DLRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~---~lr~~ 1131 (1300)
++++|++++|+.+ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++.. .+++.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999532 3699999999999999999999999999999999999999999999999999876543 46788
Q ss_pred cEEEcCCCCCCc-ccHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFE-GTVRNNLDPL---EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~-gTvr~Nl~~~---~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+||++.+|. .|+++|+... ... .+++++++++.+++.+...+.+ .+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999886 5999998642 111 2346788899988866544433 47899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCE
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGI 1266 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~ 1266 (1300)
|||+++|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47899999999999987 99999999985
No 252
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-39 Score=362.10 Aligned_cols=212 Identities=26% Similarity=0.422 Sum_probs=186.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+..++++.++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 2 TLRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 3789999999975 35999999999999999999999999999999999999999999999999998777778888899
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC--------C---CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE--------E---YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~--------~---~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
|+||++.++.+ |+++|+.+.. . ..++++.++++.+++.+.... ....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHHHH
Confidence 99999998876 9999986421 0 113356777888887654333 34678999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
||||++++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999999999998864 37899999999999987 99999999999999999998864
No 253
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-39 Score=364.50 Aligned_cols=215 Identities=26% Similarity=0.430 Sum_probs=186.9
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 59999999999754345999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCC-CC-cccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1134 IIPQDPT-MF-EGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1134 ~vpQ~~~-lf-~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
|+||+|. +| ..|+++|+.+.. ... ++++.++++.+++.+... ....+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHHH
Confidence 9999984 44 458999985421 112 235667788887765433 234679999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHHhc
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998643 6899999999999988999999999999999999998754
No 254
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-39 Score=350.59 Aligned_cols=199 Identities=34% Similarity=0.531 Sum_probs=172.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----------eEEEE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------TKAYV 685 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------~~ayv 685 (1300)
.|+++|++|+|+. . ++|+||||+|++|++++|+||||||||||+|+|+|+++|.+|+|.+.| .||||
T Consensus 4 ~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYV 80 (254)
T COG1121 4 MIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYV 80 (254)
T ss_pred EEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEc
Confidence 5899999999973 2 699999999999999999999999999999999999999999999876 48999
Q ss_pred ecCC---cCCCCCHHHHHhcCCCC-----------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 686 AQSP---WIQSGNIEDNILFGKPM-----------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 686 ~Q~~---~l~~~Ti~eNI~fg~~~-----------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
||.. |-|..||+|-+.+|... |.++.+++++..++.+.. ......|||||+||+-
T Consensus 81 PQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----------~r~i~~LSGGQ~QRV~ 149 (254)
T COG1121 81 PQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----------DRQIGELSGGQKQRVL 149 (254)
T ss_pred CcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----------CCcccccCcHHHHHHH
Confidence 9965 66889999999998532 347888888888887432 2344579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|||||.++||+|+|||||+++|+.++..+++ ++..+. +|+||++|||+++.+.. +|+|+.| |+++...|++++...
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~-lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~~ 227 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYD-LLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVLT 227 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhccC
Confidence 9999999999999999999999999998875 555443 48999999999998765 9999999 567888999998875
Q ss_pred c
Q 000755 830 S 830 (1300)
Q Consensus 830 ~ 830 (1300)
.
T Consensus 228 ~ 228 (254)
T COG1121 228 E 228 (254)
T ss_pred H
Confidence 3
No 255
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-39 Score=363.44 Aligned_cols=214 Identities=23% Similarity=0.362 Sum_probs=187.9
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcc
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSR 1131 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~ 1131 (1300)
.-.|+++|++++|++ ..+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...++++
T Consensus 5 ~~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 5 VARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred ccEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 346999999999975 359999999999999999999999999999999999999999999999999988888888889
Q ss_pred cEEEcCCCCCCc-ccHHHhcCCCC--C------C---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1132 LSIIPQDPTMFE-GTVRNNLDPLE--E------Y---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1132 i~~vpQ~~~lf~-gTvr~Nl~~~~--~------~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
++|+||++.+|. .|+++|+.+.. . . .++.++++++.+++.+...+ ....||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHH
Confidence 999999998875 59999986421 0 1 12356778888887654332 346799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988643 6899999999999887 999999999999999999998
Q ss_pred Hh
Q 000755 1277 LE 1278 (1300)
Q Consensus 1277 ~~ 1278 (1300)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 75
No 256
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=370.25 Aligned_cols=226 Identities=19% Similarity=0.306 Sum_probs=187.5
Q ss_pred eEEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC----CCcceEEECCeecCCCCHHH
Q 000755 1054 EVDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE----PTAGEIVIDGINISSIGLHD 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~----p~~G~I~idg~di~~i~~~~ 1127 (1300)
.++++|+++.|+... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.+||.|+..++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 489999999997532 359999999999999999999999999999999999998 48999999999999888766
Q ss_pred Hhc----ccEEEcCCCC--CCcc-cHHHhc----CCCCCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1128 LRS----RLSIIPQDPT--MFEG-TVRNNL----DPLEEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1128 lr~----~i~~vpQ~~~--lf~g-Tvr~Nl----~~~~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
+++ +++||||+|. +.+. |+.+++ ....... .+++.++|+++++.+.... ....+.+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhC
Confidence 543 6999999994 4432 666554 2221112 3457788999988643211 22345689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|||||||++|||||+.+|++||+||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999976 99999999999999
Q ss_pred ecChhhHHhcCCChHHHH
Q 000755 1270 YDSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f~~l 1287 (1300)
.|+++++++++...|.+.
T Consensus 235 ~g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQA 252 (326)
T ss_pred ECCHHHHhhCCCChHHHH
Confidence 999999998766555543
No 257
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.3e-39 Score=353.47 Aligned_cols=201 Identities=24% Similarity=0.369 Sum_probs=173.7
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH---HHHhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL---HDLRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~---~~lr~~ 1131 (1300)
++++|++++|+.+ +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ...|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 459999999999999999999999999999999999999999999999999977654 346788
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+||++.+|.. |+++|+.... ..+ ++++.++++.+++.+...+. ..+||||||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRAL-----------PAELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHHH
Confidence 9999999998875 9999986421 112 34567788888876544333 357899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEE
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGII 1267 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i 1267 (1300)
|||+++|+++||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 47899999999999987 999999999974
No 258
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-39 Score=365.05 Aligned_cols=215 Identities=23% Similarity=0.393 Sum_probs=187.3
Q ss_pred eEEEEeeeeeeCCC----CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC-HHHH
Q 000755 1054 EVDILNLQVRYAPH----LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG-LHDL 1128 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~----~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~-~~~l 1128 (1300)
.++++|++++|+.. .+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999742 246999999999999999999999999999999999999999999999999987643 3567
Q ss_pred hcccEEEcCCCC--CCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1129 RSRLSIIPQDPT--MFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1129 r~~i~~vpQ~~~--lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
|++++|+||+|. +|..|+.+|+.+.. ... ++++.++++.+++.+...+.+ ..||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 889999999984 66669999986431 112 345778888888876655443 5789999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhccCEEEEEeCCEEEEecChhhHH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999864 378999999999999889999999999999999999987
Q ss_pred hc
Q 000755 1278 EN 1279 (1300)
Q Consensus 1278 ~~ 1279 (1300)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 53
No 259
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9e-39 Score=352.06 Aligned_cols=210 Identities=21% Similarity=0.351 Sum_probs=185.7
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH----HHHhcc
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL----HDLRSR 1131 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~----~~lr~~ 1131 (1300)
.+.|+.++|++. .++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 577899999765 469999999999999999999999999999999999999999999999998866542 235678
Q ss_pred cEEEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1132 LSIIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1132 i~~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
++|+||++.+|+.|+++|+.......+++.+++++.+++.+.+...|.++++.+.....+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999889999997654455666788899999988888888899998888899999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHH--HHHHhc-CCcEEEEEeCChhhhhccCEEEEEeCCE
Q 000755 1212 VLVLDEATASVDTATDNLIQQ--TLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGI 1266 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~--~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl~~G~ 1266 (1300)
+|||||||++||+.+.+.+.+ .++... .+.|+|++||+++.+..||++++|++|.
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999988887 454433 3689999999999998899999999884
No 260
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-39 Score=357.18 Aligned_cols=212 Identities=24% Similarity=0.353 Sum_probs=180.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH-Hhccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD-LRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~-lr~~i 1132 (1300)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+..+ .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 5899999999964 35999999999999999999999999999999999999999999999999998877654 57789
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCC-CCH----HHHHHHHHHc-CCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEE-YKD----EEIWEALDKC-QLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~-~~d----~~i~~~l~~~-~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
+|+||++.+|.+ |+++|+..... ... +++.++++.. ++.+ ........||||||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-----------RRIQRAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-----------HHhCchhhCCHHHHHHHHHHHH
Confidence 999999999985 99999864211 111 2233344433 1221 1223456799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
++++|+||||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ |||+++|++|++++.|+++++.+
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999998864 47999999999998877 99999999999999999999974
No 261
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-39 Score=365.93 Aligned_cols=215 Identities=29% Similarity=0.455 Sum_probs=183.0
Q ss_pred eEEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCC----CHH
Q 000755 1054 EVDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSI----GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i----~~~ 1126 (1300)
.|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997422 3599999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhcccEEEcCCC--CCCcccHHHhcCCC---CCCCH----HHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCChhH
Q 000755 1127 DLRSRLSIIPQDP--TMFEGTVRNNLDPL---EEYKD----EEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~--~lf~gTvr~Nl~~~---~~~~d----~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
..|+.++|+||+| .+|..|+++|+.+. ..... +.+.++++.+++. +.. .....+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLI-----------SKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-----------hCCcccCCHHH
Confidence 6678899999998 57778999998531 12222 2356677888775 332 22346799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChh
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPT 1274 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~ 1274 (1300)
|||++|||||+.+|++|||||||++||+.+...+.+.|++.. .+.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999864 46899999999999976 9999999999999999999
Q ss_pred hHHhc
Q 000755 1275 KLLEN 1279 (1300)
Q Consensus 1275 ~l~~~ 1279 (1300)
++.+.
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 88653
No 262
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=356.95 Aligned_cols=212 Identities=25% Similarity=0.409 Sum_probs=182.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH-Hhccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD-LRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~-lr~~i 1132 (1300)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 4889999999964 35999999999999999999999999999999999999999999999999998776544 56789
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC----CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE----EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~----~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
+|+||++.+|.+ |+++|+.... ..+ ++.+.+.++..++.+. .......||||||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHL-----------RDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHH-----------hhcchhhCCHHHHHHHHHH
Confidence 999999998875 9999986431 112 1235556666665432 3344568999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
||++++|++|||||||++||+.+.+.+.+.+++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998764 47899999999988877 99999999999999999999875
No 263
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=360.52 Aligned_cols=219 Identities=25% Similarity=0.448 Sum_probs=186.0
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCC--CCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISS--IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~--i~~~ 1126 (1300)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 58999999999753 599999999999999999999999999999999999974 79999999999853 3455
Q ss_pred HHhcccEEEcCCCCCCcc-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1127 DLRSRLSIIPQDPTMFEG-TVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
.+|+.++|+||++.+|.. |+++|+... ...+ ++.+.++++.+++.+.+.. .......+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD-------RLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 678899999999998874 999998531 1111 2345667888887543321 22345578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEe------CCEEEEe
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLS------HGIIEEY 1270 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~------~G~i~e~ 1270 (1300)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999876 99999997 8999999
Q ss_pred cChhhHHhcCC
Q 000755 1271 DSPTKLLENKS 1281 (1300)
Q Consensus 1271 g~~~~l~~~~~ 1281 (1300)
|+++++++++.
T Consensus 235 ~~~~~~~~~~~ 245 (258)
T PRK14241 235 DDTEKIFSNPT 245 (258)
T ss_pred CCHHHHHhCcC
Confidence 99999986543
No 264
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-39 Score=366.13 Aligned_cols=215 Identities=26% Similarity=0.391 Sum_probs=182.7
Q ss_pred EEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCC----CHHH
Q 000755 1055 VDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSI----GLHD 1127 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i----~~~~ 1127 (1300)
|+++|++++|+... .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997532 3599999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhcccEEEcCCC--CCCcccHHHhcCCCC---CCCHH----HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1128 LRSRLSIIPQDP--TMFEGTVRNNLDPLE---EYKDE----EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1128 lr~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
+|++++|+||++ .+|+.|+++|+.+.. ..+.+ .+.++++.+++.+. .......+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHHH
Confidence 788999999998 578889999986421 12222 24456677776431 122345679999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999988643 7899999999999977 999999999999999999998
Q ss_pred Hhc
Q 000755 1277 LEN 1279 (1300)
Q Consensus 1277 ~~~ 1279 (1300)
.+.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 753
No 265
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=344.94 Aligned_cols=203 Identities=32% Similarity=0.438 Sum_probs=173.1
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TKA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~a 683 (1300)
|+|+|+++.|. ++.+++|+||+|++||+++++|||||||||+|+.|.++++|++|+|.++| ++|
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999996 46899999999999999999999999999999999999999999999998 369
Q ss_pred EEecCCcCC-CCCHHHHHhcCCC---CCHH----HHHHHHHHhcchH-HHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 684 YVAQSPWIQ-SGNIEDNILFGKP---MDRE----KYDRVLEACSLKK-DLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 684 yv~Q~~~l~-~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~-dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
||-|+.-+| +.||.|||.+--. ++++ +.++.++..+|+. +. ...-...|||||+|||.+||
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHHHHH
Confidence 999999987 5799999987533 4444 4455666666653 12 12334689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCc-cccCCEEEEEeCCeEEEecChHHHHhcCc
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEF-LPAADLILVMKDGKITQAGKYNDILNSGT 832 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 832 (1300)
||..+|+|+|+||||+||||-++..+-++...-. .-++|+|+|||+++. +..+|+|.+|++|+|++.+++++++.+..
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 9999999999999999999999998865543221 238999999999987 56699999999999999999999997654
No 266
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=357.27 Aligned_cols=219 Identities=26% Similarity=0.432 Sum_probs=187.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecC-CCCHHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINIS-SIGLHD 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~-~i~~~~ 1127 (1300)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999974 3599999999999999999999999999999999999986 5999999999985 345667
Q ss_pred HhcccEEEcCCCCCCcccHHHhcCCCC---CC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1128 LRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
+|+.++|+||++.+|..|+++|+.... .. . ++++.++++.+++.+.+. .........||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHHH
Confidence 788999999999999899999996421 11 1 234556677777754432 12334567899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
++|||||+.+|++|||||||++||+.+...+.+.|++..++.|||++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999987667899999999999887 99999999999999999999876
Q ss_pred cCC
Q 000755 1279 NKS 1281 (1300)
Q Consensus 1279 ~~~ 1281 (1300)
++.
T Consensus 234 ~~~ 236 (249)
T PRK14253 234 NPK 236 (249)
T ss_pred CCC
Confidence 543
No 267
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=361.06 Aligned_cols=223 Identities=23% Similarity=0.434 Sum_probs=189.8
Q ss_pred CCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCC--
Q 000755 1050 PTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISS-- 1122 (1300)
Q Consensus 1050 p~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~-- 1122 (1300)
|....|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++..
T Consensus 16 ~~~~~l~~~nl~~~~~~~--~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~ 93 (274)
T PRK14265 16 PDHSVFEVEGVKVFYGGF--LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQ 93 (274)
T ss_pred CCCceEEEeeEEEEeCCe--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEeccccc
Confidence 334579999999999753 599999999999999999999999999999999999864 69999999999864
Q ss_pred CCHHHHhcccEEEcCCCCCCcccHHHhcCCCCC---C---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhH
Q 000755 1123 IGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEE---Y---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1123 i~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~---~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
.....+|++++|+||++.+|+.|+.+|+..... . .++.+.++++.+++.+.+.. .....+..|||||
T Consensus 94 ~~~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq 166 (274)
T PRK14265 94 INSVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQ 166 (274)
T ss_pred chhHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHH
Confidence 334467889999999999998899999964211 1 23445667888887654432 2234567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEe---------CCE
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLS---------HGI 1266 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~---------~G~ 1266 (1300)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. |||+++|+ +|+
T Consensus 167 ~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~ 246 (274)
T PRK14265 167 QQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGK 246 (274)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCce
Confidence 99999999999999999999999999999999999999988767899999999999987 99999998 899
Q ss_pred EEEecChhhHHhcCC
Q 000755 1267 IEEYDSPTKLLENKS 1281 (1300)
Q Consensus 1267 i~e~g~~~~l~~~~~ 1281 (1300)
+++.|+++++..++.
T Consensus 247 ~~~~g~~~~~~~~~~ 261 (274)
T PRK14265 247 LVEFSPTEQMFGSPQ 261 (274)
T ss_pred EEEeCCHHHHHhCCC
Confidence 999999999986544
No 268
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=364.35 Aligned_cols=225 Identities=24% Similarity=0.408 Sum_probs=188.9
Q ss_pred CceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCCC--C
Q 000755 1052 HGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISSI--G 1124 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~i--~ 1124 (1300)
...|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.++... .
T Consensus 37 ~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 4468999999999653 59999999999999999999999999999999999865 4999999999998643 2
Q ss_pred HHHHhcccEEEcCCCCCCcccHHHhcCCCC---CC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhH
Q 000755 1125 LHDLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQ 1196 (1300)
Q Consensus 1125 ~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGq 1196 (1300)
...+|++++|+||++.+|..|+++|+.+.. .. + ++.+.++++.+++.+.+.. .....+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSD-------RLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhh-------HhhCChhhCCHHH
Confidence 345788999999999999889999996421 11 1 2345667777776533221 1234567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1197 RQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1197 rQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999987 99999999999999999999
Q ss_pred HHhcCCChHH
Q 000755 1276 LLENKSSSFA 1285 (1300)
Q Consensus 1276 l~~~~~~~f~ 1285 (1300)
+.+++...+.
T Consensus 268 ~~~~~~~~~~ 277 (286)
T PRK14275 268 LFTNPKDRMT 277 (286)
T ss_pred HHhCCCcHHH
Confidence 9876554443
No 269
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=360.57 Aligned_cols=220 Identities=28% Similarity=0.439 Sum_probs=188.5
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCCC-HHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSIG-LHD 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i~-~~~ 1127 (1300)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999975 3699999999999999999999999999999999999986 7999999999987653 346
Q ss_pred HhcccEEEcCCCCCCcccHHHhcCCC----CCCCHHH----HHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1128 LRSRLSIIPQDPTMFEGTVRNNLDPL----EEYKDEE----IWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~gTvr~Nl~~~----~~~~d~~----i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
+|++++|+||++.+|+.|+++|+... ...++++ +.+.++.+++.+... +.....+.+||||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVK-------DRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhCCcccCCHHHHHH
Confidence 78899999999999999999999642 1123333 345567777654321 22345667899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999887 99999999999999999999987
Q ss_pred cCCC
Q 000755 1279 NKSS 1282 (1300)
Q Consensus 1279 ~~~~ 1282 (1300)
.+..
T Consensus 252 ~~~~ 255 (276)
T PRK14271 252 SPKH 255 (276)
T ss_pred CcCc
Confidence 6443
No 270
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=358.88 Aligned_cols=212 Identities=27% Similarity=0.390 Sum_probs=185.5
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 4789999999975 35999999999999999999999999999999999999999999999999998887777888999
Q ss_pred EEcCCCCC-CcccHHHhcCCCCC---C----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1134 IIPQDPTM-FEGTVRNNLDPLEE---Y----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1134 ~vpQ~~~l-f~gTvr~Nl~~~~~---~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
|+||++.+ +..|+++|+..... . .++.+.++++.+++.+...+ ....||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGR-----------DYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHH
Confidence 99999987 56799999864211 1 13456778888887654333 346789999999999999
Q ss_pred Hc------cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1206 LL------KKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1206 ll------~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
|+ .+|++|||||||++||+.+.+.+.+.|++.. .+.|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999864 46899999999999986 999999999999999999988
Q ss_pred Hh
Q 000755 1277 LE 1278 (1300)
Q Consensus 1277 ~~ 1278 (1300)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 271
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.8e-38 Score=369.37 Aligned_cols=228 Identities=25% Similarity=0.369 Sum_probs=189.3
Q ss_pred ceEEEEeeeeeeCC--CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC---cceEEECCeecCCCCHHH
Q 000755 1053 GEVDILNLQVRYAP--HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT---AGEIVIDGINISSIGLHD 1127 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~--~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~---~G~I~idg~di~~i~~~~ 1127 (1300)
..++++|+++.|+. +...+++||||+|++||++||+|+||||||||+++|+|+++|. +|+|.+||.++..++.++
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 36899999999963 2235899999999999999999999999999999999999996 999999999999888776
Q ss_pred Hh----cccEEEcCCC--CCCc-ccHHHhcC----CCCCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1128 LR----SRLSIIPQDP--TMFE-GTVRNNLD----PLEEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1128 lr----~~i~~vpQ~~--~lf~-gTvr~Nl~----~~~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
+| ++|+||||+| .+++ .|+.+|+. .....+. +.+.++|+.+++.+. . ..+...+..|
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~-------~-~~~~~~p~~L 162 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEA-------R-KRMKMYPHEF 162 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCh-------H-HHhcCCcccC
Confidence 53 4799999999 4554 37777663 2222232 345667777776431 1 1234456789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|||||||++|||||+.+|++||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive 242 (330)
T PRK09473 163 SGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTME 242 (330)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999988653 6899999999999986 99999999999999
Q ss_pred ecChhhHHhcCCChHHHHH
Q 000755 1270 YDSPTKLLENKSSSFAQLV 1288 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f~~l~ 1288 (1300)
.|+++++++++...|.+.+
T Consensus 243 ~g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 243 YGNARDVFYQPSHPYSIGL 261 (330)
T ss_pred ECCHHHHHhCCCCHHHHHH
Confidence 9999999987766565543
No 272
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=358.89 Aligned_cols=222 Identities=22% Similarity=0.359 Sum_probs=191.1
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCC--CHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSI--GLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i--~~~ 1126 (1300)
.+.+++++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... ...
T Consensus 8 ~~~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGNF--MAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 48899999999753 599999999999999999999999999999999999987 799999999998643 334
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCCCC------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPLEE------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
.+|++++|+||++.+|..|+++|+..... ..++++.++++.+++.+.+.. ...+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHHH
Confidence 66888999999999998999999964311 123467788999988655432 22346678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEe--------CCEEEEec
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLS--------HGIIEEYD 1271 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~--------~G~i~e~g 1271 (1300)
+|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999988667899999999999887 99999996 89999999
Q ss_pred ChhhHHhcCCChH
Q 000755 1272 SPTKLLENKSSSF 1284 (1300)
Q Consensus 1272 ~~~~l~~~~~~~f 1284 (1300)
+++++++++...+
T Consensus 239 ~~~~~~~~~~~~~ 251 (261)
T PRK14263 239 PTAQIFQNPREQL 251 (261)
T ss_pred CHHHHHhCCCcHH
Confidence 9999987654334
No 273
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-38 Score=353.65 Aligned_cols=207 Identities=22% Similarity=0.302 Sum_probs=178.1
Q ss_pred ceEEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---
Q 000755 1053 GEVDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD--- 1127 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~--- 1127 (1300)
..|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 3699999999997532 25899999999999999999999999999999999999999999999999998776543
Q ss_pred H-hcccEEEcCCCCCCcc-cHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1128 L-RSRLSIIPQDPTMFEG-TVRNNLDPL---EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1128 l-r~~i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
. +++++|+||++.+|.. |+++|+... ... ..+++.++++.+++.+...+.+ ..|||||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~q 153 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQ 153 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHH
Confidence 2 3579999999998875 999998531 111 1345777888888866554433 468999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEEEEe
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i~e~ 1270 (1300)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||++++|++|++++.
T Consensus 154 rl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 154 RVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999999988642 6899999999999878999999999999864
No 274
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-38 Score=395.81 Aligned_cols=199 Identities=25% Similarity=0.338 Sum_probs=166.8
Q ss_pred CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC--CCcceEEECCeecCCCCHHHHhcccEEEcCCCC-CCc
Q 000755 1067 HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE--PTAGEIVIDGINISSIGLHDLRSRLSIIPQDPT-MFE 1143 (1300)
Q Consensus 1067 ~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~--p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~-lf~ 1143 (1300)
+...+|+||+=-++||-.+|++|.||||||||+++|+|-.. ..+|.|+|||.+..+ +..++++|||-|+.. +-+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999999754 357899999998753 678899999999774 545
Q ss_pred ccHHHhcCCC------CCCCHHH----HHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC-CE
Q 000755 1144 GTVRNNLDPL------EEYKDEE----IWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS-KV 1212 (1300)
Q Consensus 1144 gTvr~Nl~~~------~~~~d~~----i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~-~i 1212 (1300)
-||||-|.+. .+.+++| +.++++.++|.+.- |..||..|+.||..||.|+.||=-|+.+| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 5999998531 2334433 56777777776553 44688999999999999999999999999 89
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhh--hccCEEEEEeC-CEEEEecChhh
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSV--IDSDMVLLLSH-GIIEEYDSPTK 1275 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i--~~~D~v~vl~~-G~i~e~g~~~~ 1275 (1300)
|+|||||||||..+...|.+++|+.. .|+||++.-|.++.. +..|+++.|++ |+.+.+|++.+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999976 589999999998764 45999999975 68998887544
No 275
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=366.36 Aligned_cols=217 Identities=24% Similarity=0.358 Sum_probs=182.2
Q ss_pred CceEEEEeeeeeeCCCC---CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC----C-
Q 000755 1052 HGEVDILNLQVRYAPHL---PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS----I- 1123 (1300)
Q Consensus 1052 ~g~i~~~~v~~~y~~~~---~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~----i- 1123 (1300)
.+.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999997542 259999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHHhcccEEEcCCC--CCCcccHHHhcCCCC---CCCHH----HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCCh
Q 000755 1124 GLHDLRSRLSIIPQDP--TMFEGTVRNNLDPLE---EYKDE----EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSM 1194 (1300)
Q Consensus 1124 ~~~~lr~~i~~vpQ~~--~lf~gTvr~Nl~~~~---~~~d~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSg 1194 (1300)
+...+|++++|+||+| .+|..|+++|+.+.. ....+ .+.++++.+++.+ .........|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~----------~~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPE----------DYVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhcCChhhCCH
Confidence 3456788999999998 467789999986421 12222 2445566666521 112334568999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1195 GQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1195 GqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999988653 7899999999999876 9999999999999999
Q ss_pred ChhhHHh
Q 000755 1272 SPTKLLE 1278 (1300)
Q Consensus 1272 ~~~~l~~ 1278 (1300)
+++++.+
T Consensus 234 ~~~~~~~ 240 (289)
T PRK13645 234 SPFEIFS 240 (289)
T ss_pred CHHHHhc
Confidence 9998865
No 276
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-39 Score=340.54 Aligned_cols=215 Identities=24% Similarity=0.428 Sum_probs=186.5
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i 1132 (1300)
.++++|++..|+.. .+|+||||++++||+++++||||+|||||+++|+|+.+|.+|+|.++|.||+..++++. |..|
T Consensus 3 mL~v~~l~~~YG~~--~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGKI--QALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccce--eEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 47899999999873 59999999999999999999999999999999999999999999999999999998885 6679
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCCC-C-----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEEY-K-----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~~-~-----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
+||||...+|+. ||.|||...... . +..+.++.+. ...|.......+.+|||||||.++||||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~l----------FP~Lker~~~~aG~LSGGEQQMLAiaRA 150 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYEL----------FPRLKERRNQRAGTLSGGEQQMLAIARA 150 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHH----------ChhHHHHhcCcccCCChHHHHHHHHHHH
Confidence 999999999976 999999643111 1 1112233322 2234445556778999999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
|+.+|++|+|||||.||-|.-.+.|.++|++..+ +.||+.|-++.....+ +||.+||++|+|+..|++++|.+++
T Consensus 151 Lm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 151 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred HhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999999764 4699999999999987 9999999999999999999999764
No 277
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=8.5e-39 Score=339.59 Aligned_cols=172 Identities=33% Similarity=0.576 Sum_probs=161.3
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+....++++++||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000755 1135 IPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLV 1214 (1300)
Q Consensus 1135 vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLl 1214 (1300)
++|++.+|++|+++|+ ||||||||++||||++++|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 79999999999999999999999
Q ss_pred EeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEEeCCEE
Q 000755 1215 LDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGII 1267 (1300)
Q Consensus 1215 LDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl~~G~i 1267 (1300)
|||||++||+.+...+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998864 37899999999999877999999999974
No 278
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.5e-38 Score=360.95 Aligned_cols=228 Identities=26% Similarity=0.351 Sum_probs=189.7
Q ss_pred eEEEEeeeeeeCCC-------CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH
Q 000755 1054 EVDILNLQVRYAPH-------LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~-------~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~ 1126 (1300)
.|+++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 23699999999999999999999999999999999999999999999999998755555
Q ss_pred HHhcccEEEcCCCC--CCcc-cHHHhcCC----CCCC----CHHHHHHHHHHcCCc-HHHHhhcCCCccccccCCCCCCh
Q 000755 1127 DLRSRLSIIPQDPT--MFEG-TVRNNLDP----LEEY----KDEEIWEALDKCQLG-DEVRNKEGKLDSRVTENGENWSM 1194 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~--lf~g-Tvr~Nl~~----~~~~----~d~~i~~~l~~~~l~-~~i~~~~~gLdt~v~e~G~~LSg 1194 (1300)
..+++++|+||++. ++.. |+.+|+.. .... .++++.++++.+++. +.... ...+||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASY-----------YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhc-----------CchhcCH
Confidence 56678999999985 4443 88888742 1111 134577889999884 32221 2357999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1195 GQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1195 GqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ +.|||++||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998642 6899999999999987 9999999999999999
Q ss_pred ChhhHHhcCC-ChHHHHHHHHh
Q 000755 1272 SPTKLLENKS-SSFAQLVAEYT 1292 (1300)
Q Consensus 1272 ~~~~l~~~~~-~~f~~l~~~~~ 1292 (1300)
+++++.+.+. ..+++++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~ 254 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGHF 254 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhcc
Confidence 9999987643 34556766544
No 279
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=357.61 Aligned_cols=224 Identities=22% Similarity=0.387 Sum_probs=186.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----cceEEECCeecCC--CCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT-----AGEIVIDGINISS--IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~-----~G~I~idg~di~~--i~~~ 1126 (1300)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999974 35999999999999999999999999999999999999874 8999999999864 3345
Q ss_pred HHhcccEEEcCCCCCCcc-cHHHhcCCC---CCC-CHHH----HHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1127 DLRSRLSIIPQDPTMFEG-TVRNNLDPL---EEY-KDEE----IWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~-~d~~----i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
.+|++++|+||++.+|.. |+++|+... ... .+++ ..+.++..++.+.+. ..++ ....+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~----~~~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVK---DRLK----TPATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhh---hhhc----CCcccCCHHHH
Confidence 678899999999998875 999998531 111 2222 333455555543321 2223 34578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999987 999999999999999999999
Q ss_pred HhcCCChHHH
Q 000755 1277 LENKSSSFAQ 1286 (1300)
Q Consensus 1277 ~~~~~~~f~~ 1286 (1300)
++++...+.+
T Consensus 235 ~~~~~~~~~~ 244 (252)
T PRK14272 235 FTNPRDERTE 244 (252)
T ss_pred HhCcCcHHHH
Confidence 8766554533
No 280
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-38 Score=353.82 Aligned_cols=211 Identities=25% Similarity=0.413 Sum_probs=178.8
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH-HhcccE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD-LRSRLS 1133 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~-lr~~i~ 1133 (1300)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 4789999999753 5999999999999999999999999999999999999999999999999998776654 467899
Q ss_pred EEcCCCCCCcc-cHHHhcCCCC-C--CCHH-HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPLE-E--YKDE-EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~~-~--~~d~-~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
|+||++.+|.. |+++|+.... . ...+ ...++++..+ +++........+||||||||++|||||++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999976 9999986321 1 1112 2233444443 12223344556899999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
+|+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998653 6899999999999987 9999999999999999998873
No 281
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=358.71 Aligned_cols=222 Identities=26% Similarity=0.431 Sum_probs=189.9
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----cceEEECCeecCC--CCH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT-----AGEIVIDGINISS--IGL 1125 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~-----~G~I~idg~di~~--i~~ 1125 (1300)
+.|+++|++++|+. +.+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.+++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 35999999999999999999999999999999999999986 8999999999853 344
Q ss_pred HHHhcccEEEcCCCCCCcccHHHhcCCCC---CC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1126 HDLRSRLSIIPQDPTMFEGTVRNNLDPLE---EY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~---~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
..+|+.++|+||++.+|+.|+++|+.... .. + ++.+.++++.+++.+++.. .....+..||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 56788899999999999999999986321 11 2 2346678888887654432 23445678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeC-----CEEEE
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSH-----GIIEE 1269 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~-----G~i~e 1269 (1300)
||++|||||+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999998853 47999999999999987 999999999 99999
Q ss_pred ecChhhHHhcCCCh
Q 000755 1270 YDSPTKLLENKSSS 1283 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~ 1283 (1300)
.|+++++.+++...
T Consensus 237 ~~~~~~~~~~~~~~ 250 (261)
T PRK14258 237 FGLTKKIFNSPHDS 250 (261)
T ss_pred eCCHHHHHhCCCCH
Confidence 99999998765543
No 282
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=357.55 Aligned_cols=204 Identities=26% Similarity=0.381 Sum_probs=178.7
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhccc
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRL 1132 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i 1132 (1300)
..|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+++++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 45999999999975 35999999999999999999999999999999999999999999999998763 467889
Q ss_pred EEEcCCCCCCc-ccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1133 SIIPQDPTMFE-GTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1133 ~~vpQ~~~lf~-gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
+|+||++.+|+ .|+++|+.+.. ...++++.++++.+++.+...+ ...+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 59999997532 2235567888998888654333 34679999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChh
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPT 1274 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~ 1274 (1300)
++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.++.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998864 36899999999999876 9999999999999987654
No 283
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-38 Score=349.01 Aligned_cols=200 Identities=27% Similarity=0.386 Sum_probs=174.0
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999753 2 39999999999999999999999999999999999999999999999876543 3578999
Q ss_pred EcCCCCCCcc-cHHHhcCCCCC-------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLEE-------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~~-------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|.+ |+++|+.+... ..++++.++++.+++.+...+.+ .+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999876 99999864211 12446788899998876554443 46899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
+++|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999864 37899999999999987 9999999999998754
No 284
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=354.81 Aligned_cols=211 Identities=27% Similarity=0.405 Sum_probs=184.6
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+.. .+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 4789999999753 59999999999999999999999999999999999999999999999999986654 3678999
Q ss_pred EcCCCCCCcc-cHHHhcCCCC-------CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLE-------EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~-------~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|.+ |+++|+.+.. ...++++.++++.+++.+.....+ .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999876 9999986321 112345677888888876654443 57899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
+++|+++||||||++||+.+.+.+.+.|++..+ ++|||++||+++++.. ||+|++|++|++++.|+++++.+.+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 999999999999999999999999999998653 7899999999999877 9999999999999999999988654
No 285
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=362.61 Aligned_cols=212 Identities=27% Similarity=0.399 Sum_probs=181.6
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecC--CCCHHHHhccc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINIS--SIGLHDLRSRL 1132 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~--~i~~~~lr~~i 1132 (1300)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999974 35999999999999999999999999999999999999999999999999984 33445678899
Q ss_pred EEEcCCCC--CCcccHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPT--MFEGTVRNNLDPL---EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~--lf~gTvr~Nl~~~---~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
+|+||++. ++..|+.+|+... ..... +++.++++.+++.++.. ....+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-----------QPIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-----------CCchhCCHHHHHHHHHH
Confidence 99999985 5667899998642 11222 33556788887755432 23467999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||+.+|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999864 47899999999999976 999999999999999999988753
No 286
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.7e-39 Score=351.76 Aligned_cols=197 Identities=29% Similarity=0.419 Sum_probs=168.8
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEE
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSII 1135 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~v 1135 (1300)
+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36799999965 35999999999999999999999999999999999999999999999998764 467889999
Q ss_pred cCCCCC---CcccHHHhcCCCCC-----------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1136 PQDPTM---FEGTVRNNLDPLEE-----------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1136 pQ~~~l---f~gTvr~Nl~~~~~-----------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
||++.+ +..|+++|+..... ..++++.++++.+++.+...+ ...+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHH
Confidence 999976 56799999864211 123457788888888655433 23578999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999999865 57899999999999987 9999999986 55543
No 287
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-38 Score=350.66 Aligned_cols=211 Identities=32% Similarity=0.529 Sum_probs=191.2
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.++++|++++|+. .+++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4889999999962 24699999999999999999999999999999999999999999999987 27
Q ss_pred EEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 000755 683 AYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDAD 761 (1300)
Q Consensus 683 ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ 761 (1300)
+|++|+++++.+|++||+.++.+ ...++..+.++.+++.+.++.+|.|.++.++....+||||||||++||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765 34567777888889999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 762 IYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 762 illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.++.||+|++|++|++++.|+++++..
T Consensus 160 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQE-ALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999988865 5555556899999999999988899999999999999999888754
No 288
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=357.92 Aligned_cols=212 Identities=20% Similarity=0.357 Sum_probs=181.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i 1132 (1300)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+..+. |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999964 369999999999999999999999999999999999999999999999999988776554 4469
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCC----------------C--C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCC
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEE----------------Y--K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENG 1189 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~----------------~--~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G 1189 (1300)
+|+||++.+|.+ |+++|+..... . . .+.+.++++.+++.+ ......
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-----------HANRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-----------hhhCCh
Confidence 999999999886 99999864210 0 0 123444555555543 334455
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCE
Q 000755 1190 ENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGI 1266 (1300)
Q Consensus 1190 ~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~ 1266 (1300)
.+||||||||++||||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 78999999999999999999999999999999999999999999988643 6899999999999987 99999999999
Q ss_pred EEEecChhhHHh
Q 000755 1267 IEEYDSPTKLLE 1278 (1300)
Q Consensus 1267 i~e~g~~~~l~~ 1278 (1300)
+++.|+++++.+
T Consensus 232 i~~~~~~~~~~~ 243 (255)
T PRK11300 232 PLANGTPEEIRN 243 (255)
T ss_pred EEecCCHHHHhh
Confidence 999999999875
No 289
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3e-38 Score=352.56 Aligned_cols=214 Identities=32% Similarity=0.532 Sum_probs=190.5
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TKA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~a 683 (1300)
++++|+++.|+...+.++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999643335799999999999999999999999999999999999999999999987 279
Q ss_pred EEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 000755 684 YVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADI 762 (1300)
Q Consensus 684 yv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~i 762 (1300)
|++|++++++.|++||+.++.+ ...++..+.++.+++.+.++.+|.|.++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998999999998754 345566677888888888899999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 763 YLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 763 llLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
+||||||++||+.+.+.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+.+++....
T Consensus 161 lllDEP~~gLD~~~~~~l~~-~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 161 LLLDEATSALDAESEKLVQE-ALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 99999999999999988865 454444789999999999998889999999999999999988876543
No 290
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-38 Score=350.65 Aligned_cols=214 Identities=35% Similarity=0.549 Sum_probs=192.0
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~a 683 (1300)
|+++|++++|+. .+.++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPG-DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCC-CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468999999963 2247999999999999999999999999999999999999999999999872 69
Q ss_pred EEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 000755 684 YVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADI 762 (1300)
Q Consensus 684 yv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~i 762 (1300)
|++|+++++..|++||+.++.+ ...+++.+.++.+.+.+.++.+|.|.++..+.+..+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998754 455667777888889999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 000755 763 YLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGT 832 (1300)
Q Consensus 763 llLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 832 (1300)
+||||||++||+.+...+.+ ++..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++.....
T Consensus 160 llLDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 160 LILDEATSALDTESERLVQA-ALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 99999999999999888864 5665557899999999999988899999999999999999988876543
No 291
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=362.47 Aligned_cols=213 Identities=26% Similarity=0.399 Sum_probs=183.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC--CCHHHHhccc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS--IGLHDLRSRL 1132 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~--i~~~~lr~~i 1132 (1300)
++++|++++|++. +++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999643 359999999999999999999999999999999999999999999999999852 2345678899
Q ss_pred EEEcCCC--CCCcccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDP--TMFEGTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~--~lf~gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
+|+||++ .+|+.|+++|+.... ..+ .+.+.++++.+++.++... ...+||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENK-----------PPHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcC-----------ChhhCCHHHHHHHHHH
Confidence 9999998 467889999995321 122 2346678888888654332 2357999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
||++.+|++|||||||++||+.+...+.+.|++..+ +.|||++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998653 7899999999999986 999999999999999999998753
No 292
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.9e-39 Score=363.97 Aligned_cols=202 Identities=31% Similarity=0.418 Sum_probs=175.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 684 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ay 684 (1300)
.|+++|++.+|... .+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|. +|+
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 58999999999621 2999999999999999999999999999999999999999999999984 699
Q ss_pred EecCCcCCC-CCHHHHHhcCCCCC-------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWIQS-GNIEDNILFGKPMD-------REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l~~-~Ti~eNI~fg~~~~-------~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
|+|+.-++. .||+|||.||.... +++++++.+..+++..++.. ...||||||||||||||+
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~-----------P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRK-----------PLQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcC-----------cccCChhhHHHHHHHHHH
Confidence 999999875 59999999997642 46777788888887777654 468999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
.++|+++|||||+|+||++.+..+..++..-. .-+.|+|+|||+..... .+|+|.+|++|+|.+.|++.|+....
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999888765543311 12689999999987755 59999999999999999999998654
No 293
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-39 Score=349.82 Aligned_cols=200 Identities=26% Similarity=0.437 Sum_probs=172.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++ .++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999964 359999999999999999999999999999999999999999999999988753 45778999
Q ss_pred EcCCCCCCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|.+ |+++|+.... ... ++++.++++.+++.+.... ...+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANK-----------RVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhC-----------cHhhCCHHHHHHHHHHHHH
Confidence 9999998875 9999985421 111 3345667777777554332 3467899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
+.+|+++||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||++++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998864 46899999999999977 9999999999998764
No 294
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.3e-38 Score=350.98 Aligned_cols=207 Identities=27% Similarity=0.388 Sum_probs=172.6
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH---HHHh
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL---HDLR 1129 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~---~~lr 1129 (1300)
|+++||+++|+... +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996531 259999999999999999999999999999999999999999999999999987663 5678
Q ss_pred cccEEEcCCC--CCC-cccHHHhcCCC----C-CCCHHHH----HHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1130 SRLSIIPQDP--TMF-EGTVRNNLDPL----E-EYKDEEI----WEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1130 ~~i~~vpQ~~--~lf-~gTvr~Nl~~~----~-~~~d~~i----~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
++++|+||++ .++ ..|+++|+... . ...++.. .++++..++.+ ........+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 8999999999 344 46999998521 1 1111111 24566666531 122344567999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999998753 7899999999999986 9999999999998764
No 295
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5e-38 Score=354.71 Aligned_cols=216 Identities=28% Similarity=0.409 Sum_probs=194.9
Q ss_pred cceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------
Q 000755 614 ETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 680 (1300)
Q Consensus 614 ~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 680 (1300)
.+.|+++|++++|+. ...++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~-~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYEN-NLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCC-CCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 457999999999963 235799999999999999999999999999999999999999999999977
Q ss_pred eEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCC
Q 000755 681 TKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDA 760 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~ 760 (1300)
.++|++|+|+++++|++||+........+++..+++..++.+.++.+|.|+++.+++.+.+||||||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 26999999999999999999876545566778888888999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 761 DIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 761 ~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
++++|||||++||+++...+++ ++....+++|+|++||+++.+..||+|++|++|++++.|+++++....
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 245 (257)
T cd03288 176 SILIMDEATASIDMATENILQK-VVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQE 245 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHH-HHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhcc
Confidence 9999999999999999877754 555555689999999999999889999999999999999999887643
No 296
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-38 Score=350.69 Aligned_cols=200 Identities=33% Similarity=0.503 Sum_probs=173.5
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.++++|++|+|+ ++++++|+||++++|++++|+|||||||||||++|+|.++|.+|+|.++| .+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999997 47899999999999999999999999999999999999999999999999 47
Q ss_pred EEEecCCcC-CCCCHHHHHhcCCC-----------CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 683 AYVAQSPWI-QSGNIEDNILFGKP-----------MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 683 ayv~Q~~~l-~~~Ti~eNI~fg~~-----------~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
|||||++.. +.-||+|-+.+|+- .|++...++++.+++.+.. .+.-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHHHHH
Confidence 999999754 67799999999962 1334566678888776544 234567999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh--cCCcEEEEEecCCCc-cccCCEEEEEeCCeEEEecChHHH
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL--LRSKTVIYVTHQVEF-LPAADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~--l~~~TvIlvtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l 827 (1300)
.|||||.++|+|++||||||+||....-++++. +..+ .+++|+|+|+|+++. +..||++++|++|+++..|+++|.
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~l-l~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ev 226 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLEL-LRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEV 226 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchh
Confidence 999999999999999999999999999988864 4443 347999999999987 556999999999999999999988
Q ss_pred Hhc
Q 000755 828 LNS 830 (1300)
Q Consensus 828 ~~~ 830 (1300)
+..
T Consensus 227 lT~ 229 (258)
T COG1120 227 LTE 229 (258)
T ss_pred cCH
Confidence 753
No 297
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=356.35 Aligned_cols=222 Identities=26% Similarity=0.411 Sum_probs=187.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CcceEEECCeecCC--CCHH
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE--P---TAGEIVIDGINISS--IGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~--p---~~G~I~idg~di~~--i~~~ 1126 (1300)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 5899999999975 359999999999999999999999999999999999975 5 59999999999864 2345
Q ss_pred HHhcccEEEcCCCCCCcccHHHhcCCC---CCC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHH
Q 000755 1127 DLRSRLSIIPQDPTMFEGTVRNNLDPL---EEY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQ 1198 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~gTvr~Nl~~~---~~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQ 1198 (1300)
.++++++|+||++.+|..|+++|+... ... . ++++.++++.+++.+.+. ........+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHHH
Confidence 677889999999999989999998632 111 1 234566777777653322 2234456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1199 LVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1199 rl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
|++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|++.++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999987 9999999999999999999998
Q ss_pred hcCCChH
Q 000755 1278 ENKSSSF 1284 (1300)
Q Consensus 1278 ~~~~~~f 1284 (1300)
.++...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14255 236 LNPKEKE 242 (252)
T ss_pred cCCCChH
Confidence 7655443
No 298
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-38 Score=350.47 Aligned_cols=208 Identities=22% Similarity=0.340 Sum_probs=182.0
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++||+++|+.. ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999742 249999999999999999999999999999999999999999999999876543 2568999
Q ss_pred EcCCCCCCcc-cHHHhcCCCC--C-----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLE--E-----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~--~-----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|.+ |+++|+.... . ..++++.++++.+++.+.+.+.+ ..||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 9999996421 1 12345788899999876655544 36899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
+++|+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998643 7899999999999877 999999999999999999999864
No 299
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.3e-38 Score=367.56 Aligned_cols=203 Identities=25% Similarity=0.395 Sum_probs=176.4
Q ss_pred eeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCC
Q 000755 1063 RYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMF 1142 (1300)
Q Consensus 1063 ~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf 1142 (1300)
+|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4643 359999999999999999999999999999999999999999999999999875 3456788999999999998
Q ss_pred cc-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000755 1143 EG-TVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLV 1214 (1300)
Q Consensus 1143 ~g-Tvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLl 1214 (1300)
.. |+++|+.+.. ..+ ++++.++++.+++.+...+ ...+||||||||++|||||+++|++||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADR-----------PVGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCC-----------chhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 9999986421 112 2356778888888654322 235789999999999999999999999
Q ss_pred EeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhc
Q 000755 1215 LDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLEN 1279 (1300)
Q Consensus 1215 LDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~ 1279 (1300)
|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999999864 46899999999999987 999999999999999999998753
No 300
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=367.60 Aligned_cols=226 Identities=21% Similarity=0.332 Sum_probs=188.0
Q ss_pred eEEEEeeeeeeCC--CCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC----CCcceEEECCeecCCCCHHH
Q 000755 1054 EVDILNLQVRYAP--HLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE----PTAGEIVIDGINISSIGLHD 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~--~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~----p~~G~I~idg~di~~i~~~~ 1127 (1300)
.++++|++++|.. +...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||+++..++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22359999999999999999999999999999999999996 58999999999998887766
Q ss_pred Hh----cccEEEcCCCC--CCc-ccHHHhcCC----C---CC------CCHHHHHHHHHHcCCcHHHHhhcCCCcccccc
Q 000755 1128 LR----SRLSIIPQDPT--MFE-GTVRNNLDP----L---EE------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTE 1187 (1300)
Q Consensus 1128 lr----~~i~~vpQ~~~--lf~-gTvr~Nl~~----~---~~------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e 1187 (1300)
++ ++|+||||+|. +++ .||.+|+.. . .. ..++++.++|+++++.+.-.. ...
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDA--------MRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHH--------HhC
Confidence 53 47999999996 333 488888741 0 10 012457788999998642110 122
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeC
Q 000755 1188 NGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSH 1264 (1300)
Q Consensus 1188 ~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~ 1264 (1300)
....||||||||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||++|++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 3457899999999999999999999999999999999999999999998653 7899999999999987 999999999
Q ss_pred CEEEEecChhhHHhcCCChHHHH
Q 000755 1265 GIIEEYDSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1265 G~i~e~g~~~~l~~~~~~~f~~l 1287 (1300)
|+|+|.|+++++++++...|.+.
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHH
Confidence 99999999999988766666553
No 301
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.8e-38 Score=351.25 Aligned_cols=209 Identities=25% Similarity=0.349 Sum_probs=180.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|+++.|++ .++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...++++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999998888877888999
Q ss_pred EEcCCCCCCcccHHHhcCCC----CC-CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1134 IIPQDPTMFEGTVRNNLDPL----EE-YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1134 ~vpQ~~~lf~gTvr~Nl~~~----~~-~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
|+||++.+|+.|+++|+... .. ..++++.++++.+++.+. .....+.+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDT----------ILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChH----------HhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999988999998632 11 123456677888877532 1233456899999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEe-CCEEEEecChh
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLS-HGIIEEYDSPT 1274 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~-~G~i~e~g~~~ 1274 (1300)
+|+++||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||+|++|+ ++..+++|+++
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998643 789999999999998899999995 55666667764
No 302
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.1e-38 Score=357.59 Aligned_cols=211 Identities=25% Similarity=0.375 Sum_probs=184.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999965 359999999999999999999999999999999999999999999999999988888788888999
Q ss_pred EcCCCCC-CcccHHHhcCCCC----C-------CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHH
Q 000755 1135 IPQDPTM-FEGTVRNNLDPLE----E-------YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCL 1202 (1300)
Q Consensus 1135 vpQ~~~l-f~gTvr~Nl~~~~----~-------~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~L 1202 (1300)
+||++.+ +..|+++|+.... . ..++++.++++.+++.+.... ....||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADR-----------DMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHH
Confidence 9999864 4579999985421 0 112356778888887544322 345799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1203 GRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1203 ARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||++.+|+++||||||++||+.+...+.+.|++..+ +.|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999998653 6899999999999976 99999999999999999998864
No 303
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-38 Score=362.75 Aligned_cols=221 Identities=28% Similarity=0.496 Sum_probs=189.3
Q ss_pred CCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCcceEEECCeecCCC--
Q 000755 1051 THGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-----PTAGEIVIDGINISSI-- 1123 (1300)
Q Consensus 1051 ~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-----p~~G~I~idg~di~~i-- 1123 (1300)
....|+++|++++|++ .++|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...
T Consensus 42 ~~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 42 GDAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred CCceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 3457999999999975 359999999999999999999999999999999999986 6899999999998653
Q ss_pred CHHHHhcccEEEcCCCCCCcccHHHhcCCCCC--------------------CCHHHHHHHHHHcCCcHHHHhhcCCCcc
Q 000755 1124 GLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEE--------------------YKDEEIWEALDKCQLGDEVRNKEGKLDS 1183 (1300)
Q Consensus 1124 ~~~~lr~~i~~vpQ~~~lf~gTvr~Nl~~~~~--------------------~~d~~i~~~l~~~~l~~~i~~~~~gLdt 1183 (1300)
+...+|++++|+||++.+|++|+++|+..... ..++++.++++.+++.+.+. .
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~ 192 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------D 192 (305)
T ss_pred cHHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------H
Confidence 35567889999999999998999999863210 11344677788887754332 2
Q ss_pred ccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEE-EE
Q 000755 1184 RVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMV-LL 1261 (1300)
Q Consensus 1184 ~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v-~v 1261 (1300)
.....+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..++.|||++||+++.+.. ||+| ++
T Consensus 193 ~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~ 272 (305)
T PRK14264 193 RLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVF 272 (305)
T ss_pred HhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEE
Confidence 345566889999999999999999999999999999999999999999999988767899999999999987 9997 57
Q ss_pred EeCCEEEEecChhhHHhcC
Q 000755 1262 LSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1262 l~~G~i~e~g~~~~l~~~~ 1280 (1300)
|++|++++.|+++++.+.+
T Consensus 273 l~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 273 LTGGELVEYDDTDKIFENP 291 (305)
T ss_pred ecCCEEEEeCCHHHHHhCc
Confidence 8999999999999998653
No 304
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.1e-38 Score=347.46 Aligned_cols=206 Identities=30% Similarity=0.432 Sum_probs=188.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.++++|++++|+.. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 48899999999632 35799999999999999999999999999999999999999999999887 26
Q ss_pred EEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 000755 683 AYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADI 762 (1300)
Q Consensus 683 ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~i 762 (1300)
+|++|++.++..|++|||.+......++..++++..++.+.+..+|.|+++..++.+.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999988766777788888999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000755 763 YLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGK 823 (1300)
Q Consensus 763 llLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~ 823 (1300)
+||||||++||+.++..+.+ .+..+.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQK-TIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999888765 5555556789999999999998899999999999998765
No 305
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.9e-38 Score=348.01 Aligned_cols=203 Identities=28% Similarity=0.382 Sum_probs=174.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH---Hhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD---LRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~---lr~~ 1131 (1300)
|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999432 46999999999999999999999999999999999999999999999999998766443 6788
Q ss_pred cEEEcCCCCCC-cccHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMF-EGTVRNNLDPL---EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf-~gTvr~Nl~~~---~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+||++.+| ..|+++|+... ...++ +++.++++..++.+...+ ...+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKN-----------FPIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CchhCCHHHHHHHHHH
Confidence 99999999875 56999999642 12222 235677888887654433 3357899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
||++++|++|||||||++||+.+.+.+.+.|++.. ++.|+|++||+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999864 46899999999999987 99999999999864
No 306
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.5e-38 Score=351.78 Aligned_cols=211 Identities=26% Similarity=0.419 Sum_probs=183.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|++. ++|+|+||++.+||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++|
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 4789999999753 59999999999999999999999999999999999999999999999999876542 4678999
Q ss_pred EcCCCCCCcc-cHHHhcCCCC---CC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLE---EY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~---~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|++ |+++|+.... .. .++++.+++++.++.+...+. ..+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996421 11 134567788888876544332 357899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
+++|++++|||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999999999998643 6899999999999877 9999999999999999999998543
No 307
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.4e-38 Score=371.91 Aligned_cols=213 Identities=19% Similarity=0.282 Sum_probs=180.2
Q ss_pred eeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCe----ecCCCCHHHH---h-cc
Q 000755 1060 LQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGI----NISSIGLHDL---R-SR 1131 (1300)
Q Consensus 1060 v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~----di~~i~~~~l---r-~~ 1131 (1300)
+..+|+. ..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+.+.+ | ++
T Consensus 30 ~~~~~g~--~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~ 107 (382)
T TIGR03415 30 ILDETGL--VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHR 107 (382)
T ss_pred HHHhhCC--EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCC
Confidence 4445543 35899999999999999999999999999999999999999999999996 6666665544 3 57
Q ss_pred cEEEcCCCCCCc-ccHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1132 LSIIPQDPTMFE-GTVRNNLDPLE---EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1132 i~~vpQ~~~lf~-gTvr~Nl~~~~---~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
++|+||++.+|+ .|+++|+.+.. ... .+.+.++++.+++.++....+ .+||||||||++||
T Consensus 108 i~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LA 176 (382)
T TIGR03415 108 VSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLA 176 (382)
T ss_pred EEEEECCCcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHH
Confidence 999999999997 59999986421 122 234677899998876644433 46899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
|||+++|+||||||||++||+.+...+++.|++..+ ++|+|+|||+++++.. ||||++|++|++++.|++++++.++
T Consensus 177 RALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p 256 (382)
T TIGR03415 177 RAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNP 256 (382)
T ss_pred HHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCc
Confidence 999999999999999999999999999999988653 7899999999999876 9999999999999999999998765
Q ss_pred CChHH
Q 000755 1281 SSSFA 1285 (1300)
Q Consensus 1281 ~~~f~ 1285 (1300)
...|.
T Consensus 257 ~~~~~ 261 (382)
T TIGR03415 257 ANDYV 261 (382)
T ss_pred chHHH
Confidence 54443
No 308
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-38 Score=349.81 Aligned_cols=215 Identities=33% Similarity=0.553 Sum_probs=191.9
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~a 683 (1300)
++++|++++|+. ..++++|+||+|++|++++|+|+||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468999999952 256999999999999999999999999999999999999999999999872 69
Q ss_pred EEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 000755 684 YVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADI 762 (1300)
Q Consensus 684 yv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~i 762 (1300)
|++|++++++.|++||+.++.+ ...+.....++.+++.+.++.+|.|.++.++.+..+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998754 345556777888899888999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCchH
Q 000755 763 YLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDF 834 (1300)
Q Consensus 763 llLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 834 (1300)
+||||||++||+++...+.+ ++....+++|+|++||+++.+..||++++|++|++++.|+.+++......+
T Consensus 159 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~ 229 (236)
T cd03253 159 LLLDEATSALDTHTEREIQA-ALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLY 229 (236)
T ss_pred EEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHH
Confidence 99999999999999888865 455554588999999999999889999999999999999988887654433
No 309
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-38 Score=351.89 Aligned_cols=210 Identities=24% Similarity=0.407 Sum_probs=183.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+. + +|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++...+. .+++++|
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 468999999974 2 7999999999999999999999999999999999999999999999999876554 3678999
Q ss_pred EcCCCCCCc-ccHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFE-GTVRNNLDPL---EEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~---~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|. .|+++|+... ... .++++.++++.+++.+.+.+.+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999885 5999999632 111 2345677888888876554433 56899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcC
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENK 1280 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~ 1280 (1300)
+++|++++|||||++||+.+.+.+.+.|++... ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998643 7899999999999987 9999999999999999999988654
No 310
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.6e-38 Score=348.70 Aligned_cols=200 Identities=28% Similarity=0.465 Sum_probs=171.7
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCC--CCHHHHhccc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISS--IGLHDLRSRL 1132 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~--i~~~~lr~~i 1132 (1300)
++++|++++|+. .++|+++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ......|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999975 359999999999999999999999999999999999999999999999999853 3445678899
Q ss_pred EEEcCCCCCCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHH
Q 000755 1133 SIIPQDPTMFE-GTVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLG 1203 (1300)
Q Consensus 1133 ~~vpQ~~~lf~-gTvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LA 1203 (1300)
+|+||++.+|. .|+++|+... .... ++++.++++.+++.+...+ ...+||||||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADA-----------YPAQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhh-----------CccccCHHHHHHHHHH
Confidence 99999999886 5999998642 1222 2345667777777554333 3367899999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEE
Q 000755 1204 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGII 1267 (1300)
Q Consensus 1204 Rall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i 1267 (1300)
||++++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999865 36899999999999987 999999999975
No 311
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=6.8e-38 Score=353.08 Aligned_cols=224 Identities=22% Similarity=0.325 Sum_probs=185.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC----CcceEEECCeecCCCCHHHHh
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP----TAGEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p----~~G~I~idg~di~~i~~~~lr 1129 (1300)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 3 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cccEEEcCCCC-CCc--ccHHHhcCC----C-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1130 SRLSIIPQDPT-MFE--GTVRNNLDP----L-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1130 ~~i~~vpQ~~~-lf~--gTvr~Nl~~----~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
+.++|+||++. .|. .|+.+|+.. . ....+++++++++.+++.+. ++.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHHH
Confidence 67999999985 343 377777531 1 12234668888999888542 11234455789999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998643 6899999999999976 99999999999999999999987
Q ss_pred cCCC-hHHHHHHH
Q 000755 1279 NKSS-SFAQLVAE 1290 (1300)
Q Consensus 1279 ~~~~-~f~~l~~~ 1290 (1300)
++.. .++.++..
T Consensus 231 ~~~~~~~~~~~~~ 243 (254)
T PRK10418 231 APKHAVTRSLVSA 243 (254)
T ss_pred CCCCHHHHHHHHh
Confidence 6544 45545543
No 312
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-38 Score=353.47 Aligned_cols=226 Identities=26% Similarity=0.405 Sum_probs=189.7
Q ss_pred ceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECC------eecCCCCHH
Q 000755 1053 GEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDG------INISSIGLH 1126 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg------~di~~i~~~ 1126 (1300)
..++++|++++|++ +++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++| .++...+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 46999999999975 3599999999999999999999999999999999999999997666655 666666777
Q ss_pred HHhcccEEEcCCCCCCcc-cHHHhcCCC----CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1127 DLRSRLSIIPQDPTMFEG-TVRNNLDPL----EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~----~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
.+|++++|+||++.+|.+ |+++|+... ....+ +.+.++++.+++.+.+.. .....+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHH
Confidence 788999999999999876 999999632 11122 234667777777543311 12335678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
||++||||++++|++++|||||++||+.+...+.+.|++..+++|||++||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999976 999999999999999999999
Q ss_pred HhcCCChHHHH
Q 000755 1277 LENKSSSFAQL 1287 (1300)
Q Consensus 1277 ~~~~~~~f~~l 1287 (1300)
.+++...+.+.
T Consensus 240 ~~~~~~~~~~~ 250 (257)
T PRK14246 240 FTSPKNELTEK 250 (257)
T ss_pred HhCCCcHHHHH
Confidence 87665445443
No 313
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=365.15 Aligned_cols=203 Identities=33% Similarity=0.454 Sum_probs=178.3
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EE
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 683 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~a 683 (1300)
..++++|++.+|. +..+++|+||+|++||++++.|||||||||||++|+|+..|++|+|.++|. ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4699999999996 468999999999999999999999999999999999999999999999995 59
Q ss_pred EEecCCcCC-CCCHHHHHhcCCC----CC-H---HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 684 YVAQSPWIQ-SGNIEDNILFGKP----MD-R---EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 684 yv~Q~~~l~-~~Ti~eNI~fg~~----~~-~---~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
+|+|+.-|| +.||+|||.||.. .. + +++.++++..+|....+ .+...|||||+|||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~-----------R~p~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFAD-----------RKPHQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhh-----------hChhhhChHHHHHHHHHH
Confidence 999999998 5699999999976 12 2 36777787777776443 455789999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCc-cccCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEF-LPAADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
||..+|+++|||||+||||.+.+.++-.++.... ..|.|.|+|||+.+. +..+|||.+|++|+|.+.|+++|+....
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 9999999999999999999999998876654322 238999999999976 6779999999999999999999998764
No 314
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.6e-38 Score=333.65 Aligned_cols=206 Identities=29% Similarity=0.436 Sum_probs=179.3
Q ss_pred cceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------
Q 000755 614 ETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 681 (1300)
Q Consensus 614 ~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 681 (1300)
+..|++++++++|. ++.+++|+||+|++||.++|+|+|||||||||++|+|+++|++|+|.+.|.
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 35799999999995 578999999999999999999999999999999999999999999999883
Q ss_pred ----EEEEecCCcCCCC-CHHHHHhcCC----CCCHHHHHH----HHHHhcchHH-HhhccCCCcccccCCCCCCCHHHH
Q 000755 682 ----KAYVAQSPWIQSG-NIEDNILFGK----PMDREKYDR----VLEACSLKKD-LEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 ----~ayv~Q~~~l~~~-Ti~eNI~fg~----~~~~~~~~~----vl~~~~l~~d-l~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
+|+++|+--+|+. ||.||+.|-. ..+++.+++ -+++++|..+ .+.+| ..||||.+
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHH
Confidence 5999999999975 9999999942 244544443 4678888887 66666 57999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecCh
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY 824 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 824 (1300)
.|++||||+..||+|+++|||||+|||.++..+ .+++..+.. +-|+|+|||+++.+.. ||+|+++.||+|++.|++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~-~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~ 230 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVI-DELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTP 230 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHH-HHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCH
Confidence 999999999999999999999999999996654 677765533 7899999999998765 899999999999999999
Q ss_pred HHHHhcCchH
Q 000755 825 NDILNSGTDF 834 (1300)
Q Consensus 825 ~~l~~~~~~~ 834 (1300)
+|+.+....+
T Consensus 231 ~el~~sd~P~ 240 (263)
T COG1127 231 EELLASDDPW 240 (263)
T ss_pred HHHHhCCCHH
Confidence 9998865543
No 315
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=6.7e-38 Score=353.98 Aligned_cols=222 Identities=21% Similarity=0.357 Sum_probs=183.8
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCee-----cCCCCHHH-
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGIN-----ISSIGLHD- 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~d-----i~~i~~~~- 1127 (1300)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999975 359999999999999999999999999999999999999999999999998 77766554
Q ss_pred ---HhcccEEEcCCCC--CCc-ccHHHhcCC----CCCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCC
Q 000755 1128 ---LRSRLSIIPQDPT--MFE-GTVRNNLDP----LEEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWS 1193 (1300)
Q Consensus 1128 ---lr~~i~~vpQ~~~--lf~-gTvr~Nl~~----~~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LS 1193 (1300)
.++.++|+||++. ++. .|+.+|+.. ..... .+++.++++.+++.+ +.....+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3557999999984 333 478888632 11111 233455666666532 12345567899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEe
Q 000755 1194 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1194 gGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~ 1270 (1300)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.. ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987643 7899999999999986 999999999999999
Q ss_pred cChhhHHhcCCChHHHH
Q 000755 1271 DSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1271 g~~~~l~~~~~~~f~~l 1287 (1300)
|+++++..++...|.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~ 250 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQL 250 (258)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987655445443
No 316
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.4e-38 Score=345.35 Aligned_cols=201 Identities=23% Similarity=0.387 Sum_probs=175.0
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|+. .++|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 468999999999999999999999999999999999999999999999987543 46778999
Q ss_pred EcCCCCCCcc-cHHHhcCCC-C-C-----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFEG-TVRNNLDPL-E-E-----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~-~-~-----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||+|.+|.+ |+++|+... . . ..++++.++++.+++.+...+.+ .+||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999875 999998531 1 1 12346777899998876554443 46899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecC
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDS 1272 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~ 1272 (1300)
+++|+++||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|+
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998653 6899999999999876 99999999999998874
No 317
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-38 Score=369.04 Aligned_cols=212 Identities=22% Similarity=0.377 Sum_probs=184.8
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCC----CHHHHhc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSI----GLHDLRS 1130 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i----~~~~lr~ 1130 (1300)
|++ |++++|+.. .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... .....++
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 899999753 23 89999999999999999999999999999999999999999999998643 2345678
Q ss_pred ccEEEcCCCCCCcc-cHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1131 RLSIIPQDPTMFEG-TVRNNLDPL-EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~g-Tvr~Nl~~~-~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
+++|+||++.+|+. |+++|+.+. ....++++.++++.+++.+...+.+ .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 89999999999865 999999753 2334567888999998876554443 5789999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCC
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSS 1282 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~ 1282 (1300)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 9999999999999999999999999988653 6899999999999987 999999999999999999999987653
No 318
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.8e-38 Score=352.71 Aligned_cols=211 Identities=22% Similarity=0.277 Sum_probs=177.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCcceEEECCeecCCCCHHHH-hcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIV--EPTAGEIVIDGINISSIGLHDL-RSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~--~p~~G~I~idg~di~~i~~~~l-r~~ 1131 (1300)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+. +|++|+|.+||.++...+.... +..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 478999999974 35999999999999999999999999999999999995 7999999999999988776554 455
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCC----CC------CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCC-CCChh
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPL----EE------YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGE-NWSMG 1195 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~----~~------~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~-~LSgG 1195 (1300)
++|+||++.+|.+ |+++|+... .. .+ ++.+.++++.+++.+.. ++ .... .||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~----~~~~~~LS~G 148 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LN----RSVNEGFSGG 148 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cc----cccccCcCHH
Confidence 9999999998876 899987431 10 11 23456677777775321 11 1222 49999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc--cCEEEEEeCCEEEEecC
Q 000755 1196 QRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID--SDMVLLLSHGIIEEYDS 1272 (1300)
Q Consensus 1196 qrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~--~D~v~vl~~G~i~e~g~ 1272 (1300)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~ 228 (243)
T TIGR01978 149 EKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGD 228 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999999875 36899999999999986 79999999999999999
Q ss_pred hhhHH
Q 000755 1273 PTKLL 1277 (1300)
Q Consensus 1273 ~~~l~ 1277 (1300)
++++.
T Consensus 229 ~~~~~ 233 (243)
T TIGR01978 229 VELAK 233 (243)
T ss_pred HHHhc
Confidence 88654
No 319
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=347.07 Aligned_cols=201 Identities=32% Similarity=0.465 Sum_probs=173.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
.|.+++++..|+ ..++++|||++|+.||.+|+.|||||||||||++|+|+..|++|.|.++|.
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 367788888886 457899999999999999999999999999999999999999999999985
Q ss_pred EEEEecCCcCC-CCCHHHHHhcCCCC---------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 682 KAYVAQSPWIQ-SGNIEDNILFGKPM---------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 682 ~ayv~Q~~~l~-~~Ti~eNI~fg~~~---------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
||||+|+.-+| ..||.|||.||.+. .+.+..+.++.|.|+.--+.. ...||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ry-----------P~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRY-----------PAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcC-----------chhcChHHHHHHH
Confidence 69999999887 57999999999732 245667778888887554443 4689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCcc-ccCCEEEEEeCCeEEEecChHHHH
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFL-PAADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
|||||...|++|||||||+|||++.++.+- .++.... + +.|+++|||+.++. ..||+|++|++|+|.+.|+++|+.
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr-~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELR-RWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHH-HHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999999999999999988874 4554433 2 78999999999875 569999999999999999999987
Q ss_pred hcC
Q 000755 829 NSG 831 (1300)
Q Consensus 829 ~~~ 831 (1300)
...
T Consensus 227 ~~P 229 (345)
T COG1118 227 DHP 229 (345)
T ss_pred cCC
Confidence 653
No 320
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-35 Score=326.53 Aligned_cols=506 Identities=17% Similarity=0.141 Sum_probs=332.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAK-IVECLAQRHWMFRLQVAG 369 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~-~~~~l~~~~~~~~~~~~g 369 (1300)
.-.++|.+++.++....+.+...+. +..++-.+-+++.+..........+.+++++.. +.+.+++.- ...+|
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~---g~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~lg----~t~~g 76 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGAL---GIGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQLG----LTTLG 76 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHHHH----HHHHH
Confidence 3456788888877666665554433 333443333444322211100111111111111 112222222 23344
Q ss_pred HHHHHHHHHHHHHHHhcCCchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000755 370 IKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWYMHDPWLVILQVSLALLILYKNLGLASIAALFA 449 (1300)
Q Consensus 370 ~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Ivnl~s~Dv~~i~~~~~~~~~~~~~~l~i~~~l~lL~~~lg~~~l~~l~~ 449 (1300)
..+-..++..+-+|.+.-+....++.+++.++..++.|+..|.-.+..+.......+.+..+...|++.-+..++..++.
T Consensus 77 q~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 77 QHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45555556667788888888888889999999999999999985555555555444444444555555555555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHH--HHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 000755 450 TVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEM--KFLSKII-ELRKIEAGWLKKFLYTGAMT 526 (1300)
Q Consensus 450 ~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~--~f~~~i~-~~R~~E~~~l~~~~~~~~~~ 526 (1300)
+++.+..++....+..+...+..+..|+-.+..+.++.|-|.+|++.--. .+.+.+. ..++.+..... .....+
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~~~---~n~f~~ 233 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHHIIR---ANTFHL 233 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhhhhh---hhHHHH
Confidence 66666677777777777777888889999999999999999999886322 2222221 12222221111 011111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 000755 527 SFVFWGAPTFVSVATFGACMLLGIPL-ESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVV 605 (1300)
Q Consensus 527 ~~~~~~~p~~v~~~~f~~~~~~~~~L-t~g~vft~lal~~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 605 (1300)
....|....+.+++....|+...-.. +...+.++...+-.+..|+.+....+..+.+|.++++||.++-..|+..+-..
T Consensus 234 la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~ 313 (546)
T COG4615 234 LAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPR 313 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCC
Confidence 23344444444444333232222112 22244555556667899999999999999999999999999866544322111
Q ss_pred cCCCCCCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCeE---
Q 000755 606 EKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTK--- 682 (1300)
Q Consensus 606 ~~~~~~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~~--- 682 (1300)
+ .+. +.-..++++|+.|+|++. ..-+.-||++|++||++-|+|.||||||||++++.|++.|++|+|.+||+.
T Consensus 314 ~-q~~-p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~ 389 (546)
T COG4615 314 P-QAF-PDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSA 389 (546)
T ss_pred C-CcC-CcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCC
Confidence 1 111 123479999999999843 377889999999999999999999999999999999999999999999963
Q ss_pred ----------EEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 683 ----------AYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 683 ----------ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
+-|+-|.|+|+.++. ++. .+++..++-++.-.+....+ +.+|--+ -..||-|||.|+|
T Consensus 390 e~ledYR~LfSavFsDyhLF~~ll~-----~e~~as~q~i~~~LqrLel~~kts-l~d~~fs-----~~kLStGQkKRlA 458 (546)
T COG4615 390 EQLEDYRKLFSAVFSDYHLFDQLLG-----PEGKASPQLIEKWLQRLELAHKTS-LNDGRFS-----NLKLSTGQKKRLA 458 (546)
T ss_pred CCHHHHHHHHHHHhhhHhhhHhhhC-----CccCCChHHHHHHHHHHHHhhhhc-ccCCccc-----ccccccchHHHHH
Confidence 345556666654331 122 34555555555544443332 2222211 2469999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccccCCEEEEEeCCeEEEe
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPAADLILVMKDGKITQA 821 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~ 821 (1300)
+--|++.+.|||+|||=-+-=||+-++..++..+-.+ ..|||++.|||+-.+...|||++.|++|++++.
T Consensus 459 ll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 459 LLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999999999999998888766433 359999999999999999999999999999865
No 321
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.7e-38 Score=353.47 Aligned_cols=221 Identities=21% Similarity=0.317 Sum_probs=185.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC---cceEEECCeecCCCC-----H
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT---AGEIVIDGINISSIG-----L 1125 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~---~G~I~idg~di~~i~-----~ 1125 (1300)
.++++||+++|+. .++|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.+||.++...+ .
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999974 35999999999999999999999999999999999999986 499999999986532 3
Q ss_pred HHHhcccEEEcCCCCCCcc-cHHHhcCCCC---------------CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCC
Q 000755 1126 HDLRSRLSIIPQDPTMFEG-TVRNNLDPLE---------------EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENG 1189 (1300)
Q Consensus 1126 ~~lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~~---------------~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G 1189 (1300)
..+|++++|+||++.+|.+ |+++|+.... ....+++.++++.+++.+...+ ..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------RV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------Cc
Confidence 4567889999999998875 9999985321 0112356778888877554332 34
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCE
Q 000755 1190 ENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGI 1266 (1300)
Q Consensus 1190 ~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~ 1266 (1300)
..||+|||||++||||++.+|++|||||||++||+.+.+.+.+.|++.. .+.|||++||+++.+.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 5789999999999999999999999999999999999999999999865 36899999999999876 99999999999
Q ss_pred EEEecChhhHHhcCCChHHHHHHH
Q 000755 1267 IEEYDSPTKLLENKSSSFAQLVAE 1290 (1300)
Q Consensus 1267 i~e~g~~~~l~~~~~~~f~~l~~~ 1290 (1300)
+++.|+++++ + .....+++.+
T Consensus 231 i~~~g~~~~~-~--~~~~~~~~~~ 251 (262)
T PRK09984 231 VFYDGSSQQF-D--NERFDHLYRS 251 (262)
T ss_pred EEEeCCHHHh-c--cHHHHHHHhh
Confidence 9999999986 2 2345555543
No 322
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=347.49 Aligned_cols=445 Identities=18% Similarity=0.188 Sum_probs=317.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhcCCCH--H---HHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Q 000755 361 WMFRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTS--G---EIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLI 434 (1300)
Q Consensus 361 ~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~--G---~Ivnl~s~Dv~~i~~~~~-~~~~~~~~~l~i~~~l~l 434 (1300)
..|..+++..+.|.-|...+.+|-+.-...++..... + ..=.++..|+..+.+... ....+....++++....+
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~i 185 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGI 185 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999999999999999999876444322221 1 234688999888776533 233444455555556666
Q ss_pred HHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHH
Q 000755 435 LYKNLG---------------LASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEM 499 (1300)
Q Consensus 435 L~~~lg---------------~~~l~~l~~~~l~~~~~~~~~k~~~~~~~~~~~~~d~r~~~~~E~L~~ir~IK~~~~E~ 499 (1300)
||...| ....+.++-.+....+...++|...+...+..+.....-.....+.++-..|-+|+-|+
T Consensus 186 Lw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~ 265 (604)
T COG4178 186 LWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEK 265 (604)
T ss_pred HHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcH
Confidence 663333 11112222222222333344555444443333443444445556889999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000755 500 KFLSKIIELRKIEAGWLKK-F---LYTGAMTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLP 575 (1300)
Q Consensus 500 ~f~~~i~~~R~~E~~~l~~-~---~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~g~vft~lal~~~l~~pl~~lp 575 (1300)
...+++.+.-..=++..++ . .....+.....+.+++ +. ....+-.++.+.++.|.+..+...|+.+...+.-+-
T Consensus 266 ~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v-~P-~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi 343 (604)
T COG4178 266 VERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVV-LP-ILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFI 343 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHH-HH-HHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777765432111111111 1 1111112222222221 11 111222356788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC--CCcccccCCCC------CCCcceEEEEeEEEEecCCCCCCceecceeEEeCCcE
Q 000755 576 DTISMIIQTKVSLDRIASFLCLDD--LQSDVVEKHPR------GSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMR 647 (1300)
Q Consensus 576 ~~i~~~~~a~vs~~RI~~fL~~~e--~~~~~~~~~~~------~~~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~ 647 (1300)
+.+..+.+-++++.|+.+|...-+ ..++.....+. ...+..|+++|++..-|. ..+.+++.||++++|+.
T Consensus 344 ~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~--~~~ll~~l~~~v~~G~~ 421 (604)
T COG4178 344 DNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPD--GQTLLSELNFEVRPGER 421 (604)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCC--CCeeeccceeeeCCCCE
Confidence 999999999999999999985322 00100000000 111468999999999764 34899999999999999
Q ss_pred EEEEcCCCCChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCCCCHHHHHhcCCC---CCHHHHHHHHHHhcchH
Q 000755 648 VAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSGNIEDNILFGKP---MDREKYDRVLEACSLKK 722 (1300)
Q Consensus 648 ~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~~Ti~eNI~fg~~---~~~~~~~~vl~~~~l~~ 722 (1300)
+.|.|+||||||||+++|.|..|--+|+|.... .+-|+||.|++..||.||-|++.+. ++++++.+++..|+|.+
T Consensus 422 llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~ 501 (604)
T COG4178 422 LLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGD 501 (604)
T ss_pred EEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHH
Confidence 999999999999999999999999999998873 3799999999999999999999764 67899999999999999
Q ss_pred HHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCC
Q 000755 723 DLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVE 802 (1300)
Q Consensus 723 dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~ 802 (1300)
-.+.+..-+ .-...||||||||+++||.++++|++++|||.|||||++++..+++ .+++.+.+.|+|-|.||..
T Consensus 502 L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q-~l~~~lp~~tvISV~Hr~t 575 (604)
T COG4178 502 LAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQ-LLKEELPDATVISVGHRPT 575 (604)
T ss_pred HHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHH-HHHhhCCCCEEEEeccchh
Confidence 988875433 2456799999999999999999999999999999999999999986 5677788999999999999
Q ss_pred ccccCCEEEEEeC
Q 000755 803 FLPAADLILVMKD 815 (1300)
Q Consensus 803 ~l~~~d~i~~l~~ 815 (1300)
.....++.+.+.+
T Consensus 576 l~~~h~~~l~l~~ 588 (604)
T COG4178 576 LWNFHSRQLELLD 588 (604)
T ss_pred hHHHHhhheeecc
Confidence 8877777666643
No 323
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=354.19 Aligned_cols=211 Identities=26% Similarity=0.364 Sum_probs=183.6
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC--------cceEEECCeecCCCCHH
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT--------AGEIVIDGINISSIGLH 1126 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~--------~G~I~idg~di~~i~~~ 1126 (1300)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 7899999999653 5999999999999999999999999999999999999998 99999999999887777
Q ss_pred HHhcccEEEcCCCC-CCcccHHHhcCCCC--C------C---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCCh
Q 000755 1127 DLRSRLSIIPQDPT-MFEGTVRNNLDPLE--E------Y---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSM 1194 (1300)
Q Consensus 1127 ~lr~~i~~vpQ~~~-lf~gTvr~Nl~~~~--~------~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSg 1194 (1300)
.+++.++|+||++. +|..|+++|+.... . . .++.++++++.+++.+. .......|||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATAL-----------VGRDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCH
Confidence 88888999999986 56789999985421 0 1 12346677777776543 3344568999
Q ss_pred hHHHHHHHHHHHc---------cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEE
Q 000755 1195 GQRQLVCLGRVLL---------KKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLL 1262 (1300)
Q Consensus 1195 GqrQrl~LARall---------~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl 1262 (1300)
|||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||++++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998653 6899999999999976 9999999
Q ss_pred eCCEEEEecChhhHHh
Q 000755 1263 SHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1263 ~~G~i~e~g~~~~l~~ 1278 (1300)
++|++++.|+++++++
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999999875
No 324
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=330.76 Aligned_cols=206 Identities=30% Similarity=0.440 Sum_probs=180.6
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCc-----cEEEEcCe--------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS-----GTLKLCGT-------- 681 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-----G~i~~~g~-------- 681 (1300)
..++++|+++.|. ++.+|+|||++|++++++|++|||||||||||+++.+..+... |+|.++|.
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 4689999999996 4679999999999999999999999999999999999887765 99998883
Q ss_pred -------EEEEecCCcCCCCCHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 -------KAYVAQSPWIQSGNIEDNILFGKPM---D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 -------~ayv~Q~~~l~~~Ti~eNI~fg~~~---~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
+|+|+|.|--|..||.|||.||... . ++..++.++.++|.+.... .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 5999999999999999999999542 1 3456777888888766542 34567888999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++|||||.-+|+|+|||||||||||.+..+| ++++..+.++-|+|+|||+++-... +|+...+-+|+++|.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999998888 6788877778899999999987655 89999999999999999999
Q ss_pred HHhcC
Q 000755 827 ILNSG 831 (1300)
Q Consensus 827 l~~~~ 831 (1300)
+..+.
T Consensus 235 iF~~P 239 (253)
T COG1117 235 IFTNP 239 (253)
T ss_pred hhcCc
Confidence 87654
No 325
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.6e-37 Score=342.54 Aligned_cols=205 Identities=38% Similarity=0.555 Sum_probs=184.0
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.++++|+++.|+. ...++++|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPN-QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCC-CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 4889999999963 235799999999999999999999999999999999999999999999987 26
Q ss_pred EEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 000755 683 AYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDAD 761 (1300)
Q Consensus 683 ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ 761 (1300)
+|++|+++++..|+.||+.++.+ .++++..+.++.+++.+.++..|.|.+|.+.+...+||||||||++||||+..+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999988999999998754 35567778888999998899999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEec
Q 000755 762 IYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAG 822 (1300)
Q Consensus 762 illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g 822 (1300)
++||||||++||+.+...+++ .+..+.+++|+|++||+++++..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKE-RLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999888865 455554558999999999988779999999999998654
No 326
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.7e-37 Score=343.14 Aligned_cols=204 Identities=27% Similarity=0.443 Sum_probs=178.2
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|+. .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++... . ++.++|
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~-~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---D-LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---c-cccEEE
Confidence 478999999975 3599999999999999999999999999999999999999999999999987532 2 347999
Q ss_pred EcCCCCCCc-ccHHHhcCCC---CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1135 IPQDPTMFE-GTVRNNLDPL---EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~---~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
+||++.+|. .|+++|+... ....++++.++++.+++.+..... ..+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 5999998532 233466788899999887654433 3568999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999864 36899999999999976 99999999999999998764
No 327
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-38 Score=331.03 Aligned_cols=171 Identities=41% Similarity=0.719 Sum_probs=160.6
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++..+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997643469999999999999999999999999999999999999999999999999988887788889999
Q ss_pred EcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000755 1135 IPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLV 1214 (1300)
Q Consensus 1135 vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLl 1214 (1300)
+||++.+|+.|+.+|+ ||+|||||++||||++++|++||
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 79999999999999999999999
Q ss_pred EeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCE
Q 000755 1215 LDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGI 1266 (1300)
Q Consensus 1215 LDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~ 1266 (1300)
|||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998766799999999999998899999999985
No 328
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=351.22 Aligned_cols=201 Identities=24% Similarity=0.305 Sum_probs=173.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999965 3599999999999999999999999999999999999999999999999998642 346899
Q ss_pred EcCCCCCCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1135 IPQDPTMFE-GTVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
+||++.+|. .|+++|+... .... ++++.++++.+++.+...+ ...+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 999999887 5999998642 1122 2346778888887654333 3467899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEe--CCEEEEecCh
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLS--HGIIEEYDSP 1273 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~--~G~i~e~g~~ 1273 (1300)
+++|++|||||||++||+.+...+.+.|++.. .++|||++||+++.+.. ||+|++|+ +|++++.+++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999999863 37899999999999977 99999998 5999998754
No 329
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5e-38 Score=318.36 Aligned_cols=198 Identities=30% Similarity=0.445 Sum_probs=173.0
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 685 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ayv 685 (1300)
+.++++.|+|... . -..+++|++||++||+|||||||||||++|+|+..|.+|+|.++|. ++++
T Consensus 2 l~L~~V~~~y~~~----~-~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHL----P-MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcc----e-EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 5678899999632 1 2578999999999999999999999999999999999999999984 5899
Q ss_pred ecCCcCCC-CCHHHHHhcCCC-------CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 686 AQSPWIQS-GNIEDNILFGKP-------MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 686 ~Q~~~l~~-~Ti~eNI~fg~~-------~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
+|+.-+|. -||++||-+|.. .+.++.+.++...+|....+.+| ..||||||||+||||++.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHHh
Confidence 99999996 499999999964 35678888999999999888887 479999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhh--cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGL--LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~--l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
++-+|++|||||||||+.-+..... ++..+ -++.|+++|||+++-+.. +|+++++++|+|.++|+.++++...
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~-Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLA-LVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHH-HHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 9999999999999999999887754 33333 257899999999998765 9999999999999999999987643
No 330
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=339.52 Aligned_cols=214 Identities=23% Similarity=0.394 Sum_probs=187.7
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i 1132 (1300)
-+++++++++|+.- .+++||||++++||++||||||||||||++++|.|+|+|++|+|.++|.||+.+++++. |..|
T Consensus 4 lL~v~~l~k~FGGl--~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 4 LLEVRGLSKRFGGL--TAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeeccceeecCCE--EEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 36789999999864 48999999999999999999999999999999999999999999999999999998885 4468
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCC-------------C--C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEE-------------Y--K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~-------------~--~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
+--+|.+.+|++ ||.||+..... + . .++..+.|+.++|.+.. .+...+|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-----------~~~A~~L 150 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-----------DRPAGNL 150 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-----------cchhhcC
Confidence 888999999987 99999853210 1 1 23455667777766543 3445689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|+|||+|+-|||||..+|++|+||||.|||.+.....+.+.|++..+ +.||++|-||++.+++ ||||+||+.|+++.
T Consensus 151 syG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IA 230 (250)
T COG0411 151 SYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIA 230 (250)
T ss_pred ChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcc
Confidence 99999999999999999999999999999999999999999998764 4899999999999999 99999999999999
Q ss_pred ecChhhHHhcC
Q 000755 1270 YDSPTKLLENK 1280 (1300)
Q Consensus 1270 ~g~~~~l~~~~ 1280 (1300)
+|+|+++.+++
T Consensus 231 eG~P~eV~~dp 241 (250)
T COG0411 231 EGTPEEVRNNP 241 (250)
T ss_pred cCCHHHHhcCH
Confidence 99999999875
No 331
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.4e-36 Score=401.06 Aligned_cols=328 Identities=26% Similarity=0.325 Sum_probs=230.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHccCC--CEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccccCCEEE
Q 000755 735 IGERGINLSGGQKQRIQIARALYQDA--DIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPAADLIL 811 (1300)
Q Consensus 735 ige~g~~LSGGQkqRiaLARAly~~~--~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~~d~i~ 811 (1300)
......+|||||+|||+|||||..+| ++|||||||++||+...+.+++ .+..+ .+|.|||+|||+++++..||+|+
T Consensus 470 ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILDEPTagLD~~~~~~L~~-lL~~L~~~G~TVIvVeHd~~vi~~aDrVi 548 (1809)
T PRK00635 470 PERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQDTHKLIN-VIKKLRDQGNTVLLVEHDEQMISLADRII 548 (1809)
T ss_pred CCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEECCccCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCcHHHHHhCCEEE
Confidence 35667899999999999999999999 8999999999999999998875 44444 35899999999999877799999
Q ss_pred EEe------CCeEEEecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCcccccc
Q 000755 812 VMK------DGKITQAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQ 885 (1300)
Q Consensus 812 ~l~------~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s 885 (1300)
+|. +|+|+..|++++++..... +..
T Consensus 549 ~L~pGag~~gG~Iv~~G~~~eil~~~~~---l~~---------------------------------------------- 579 (1809)
T PRK00635 549 DIGPGAGIFGGEVLFNGSPREFLAKSDS---LTA---------------------------------------------- 579 (1809)
T ss_pred EEcCCcccCCCEEEEecCHHHHhhChHH---HHH----------------------------------------------
Confidence 996 7899999988776431100 000
Q ss_pred ccchhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 000755 886 TDKVDEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLD 965 (1300)
Q Consensus 886 ~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 965 (1300)
.+
T Consensus 580 ------------------------------------------------------------------------~~------ 581 (1809)
T PRK00635 580 ------------------------------------------------------------------------KY------ 581 (1809)
T ss_pred ------------------------------------------------------------------------HH------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCC
Q 000755 966 MLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRP 1045 (1300)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~ 1045 (1300)
+ .+. ...+. + . ..+
T Consensus 582 ----------------l-~~~-------------------------------------------~~~~~--~---~-~~~ 595 (1809)
T PRK00635 582 ----------------L-RQE-------------------------------------------LTIPI--P---E-KRT 595 (1809)
T ss_pred ----------------h-cCc-------------------------------------------ccccC--c---c-ccc
Confidence 0 000 00000 0 0 000
Q ss_pred CCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHH---------HHhcCCCCCcc----e
Q 000755 1046 DCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQ---------TLFRIVEPTAG----E 1112 (1300)
Q Consensus 1046 ~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~---------~L~gl~~p~~G----~ 1112 (1300)
+..+.++++|++. ..|+|+|++|++||++||+|+||||||||++ .|.|...+..+ .
T Consensus 596 ----~~~~~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~ 664 (1809)
T PRK00635 596 ----NSLGTLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGA 664 (1809)
T ss_pred ----CCCCeEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccc
Confidence 0123588888863 2699999999999999999999999999999 55554333111 2
Q ss_pred ----EEECCeecCCC----CHH------HHh---------cc-----cEEEcCC------------------C-------
Q 000755 1113 ----IVIDGINISSI----GLH------DLR---------SR-----LSIIPQD------------------P------- 1139 (1300)
Q Consensus 1113 ----I~idg~di~~i----~~~------~lr---------~~-----i~~vpQ~------------------~------- 1139 (1300)
|.||-.++..- +.. ++| ++ ..+.++. |
T Consensus 665 i~~vi~idQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~ 744 (1809)
T PRK00635 665 ISRLVHITRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCP 744 (1809)
T ss_pred cceeEEecCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECC
Confidence 34443333221 011 333 11 1122221 0
Q ss_pred -------------CCCcc-cHHHhcCCCCC------CCHHHHHH---HHHHcCCcHHHHhhcCCCccc-cccCCCCCChh
Q 000755 1140 -------------TMFEG-TVRNNLDPLEE------YKDEEIWE---ALDKCQLGDEVRNKEGKLDSR-VTENGENWSMG 1195 (1300)
Q Consensus 1140 -------------~lf~g-Tvr~Nl~~~~~------~~d~~i~~---~l~~~~l~~~i~~~~~gLdt~-v~e~G~~LSgG 1195 (1300)
..+.+ ||.|||++... ...+++.+ +|+.+ ||+.. .+....+||||
T Consensus 745 ~C~GkRy~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~v-----------GL~~l~l~q~~~tLSGG 813 (1809)
T PRK00635 745 SCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSL-----------GLDYLPLGRPLSSLSGG 813 (1809)
T ss_pred ccCCcccCHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHc-----------CCcchhhcCccccCCHH
Confidence 12333 77777754311 01122222 33333 44433 45666789999
Q ss_pred HHHHHHHHHHHc---cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEEe------CC
Q 000755 1196 QRQLVCLGRVLL---KKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLLS------HG 1265 (1300)
Q Consensus 1196 qrQrl~LARall---~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl~------~G 1265 (1300)
||||++|||||+ ++|++|||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|. +|
T Consensus 814 E~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G 893 (1809)
T PRK00635 814 EIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGG 893 (1809)
T ss_pred HHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCC
Confidence 999999999998 6999999999999999999999999998864 4789999999999996699999996 79
Q ss_pred EEEEecChhhHHh
Q 000755 1266 IIEEYDSPTKLLE 1278 (1300)
Q Consensus 1266 ~i~e~g~~~~l~~ 1278 (1300)
++++.|+|+++..
T Consensus 894 ~iv~~Gtpeel~~ 906 (1809)
T PRK00635 894 YLLASCSPEELIH 906 (1809)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999999986
No 332
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-38 Score=343.56 Aligned_cols=201 Identities=35% Similarity=0.539 Sum_probs=177.2
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
.++++|++|+|++. .++|+|+|++|++|+.++|+|+||||||||++++.|.++|++|.|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999754 68999999999999999999999999999999999999999999998873
Q ss_pred EEEEecCC--cCCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 KAYVAQSP--WIQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 ~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
++||+|+| .+|..||.|.+.||.. +.+ ++..++++.|++.+..+ ....+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~-----------r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLD-----------RPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhcc-----------CCccccCCcceeeHHh
Confidence 79999999 6889999999999964 333 45677888888876644 3457899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|.+|..+|+++|||||||+||+...+.+.+ .+..+. . ++|+|++||+++.+.. ||++++|++|+++..|++.++.+
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~-~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLE-LLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHH-HHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 999999999999999999999999999875 444443 3 5899999999999876 99999999999999999988876
Q ss_pred c
Q 000755 830 S 830 (1300)
Q Consensus 830 ~ 830 (1300)
.
T Consensus 229 ~ 229 (235)
T COG1122 229 D 229 (235)
T ss_pred h
Confidence 4
No 333
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-37 Score=365.59 Aligned_cols=212 Identities=25% Similarity=0.390 Sum_probs=180.9
Q ss_pred eeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC----HHHHhcccEE
Q 000755 1059 NLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG----LHDLRSRLSI 1134 (1300)
Q Consensus 1059 ~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~----~~~lr~~i~~ 1134 (1300)
|++++|++. .+ |+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ....|++++|
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 789999753 35 999999999999999999999999999999999999999999999986532 2356778999
Q ss_pred EcCCCCCCcc-cHHHhcCCCC-CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLE-EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~-~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
+||++.+|.. |+++|+.+.. ... ++++.++++.+++.+...+ ...+||||||||++|||||+.
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGR-----------LPGRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHHc
Confidence 9999999976 9999996421 111 2346777888877654433 345789999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCChHH
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSSSFA 1285 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~ 1285 (1300)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|.
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 228 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPWL 228 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcccc
Confidence 9999999999999999999999999998653 6899999999999987 999999999999999999999877655443
No 334
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2e-37 Score=334.42 Aligned_cols=192 Identities=33% Similarity=0.462 Sum_probs=160.5
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
++++|++..|..+. ..++|+++||+|++||+++|+|||||||||||++|.|...|++|.|.++|.
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 56889999987432 246899999999999999999999999999999999999999999999983
Q ss_pred ---EEEEecCCcCC-CCCHHHHHhcC----CCCC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 ---KAYVAQSPWIQ-SGNIEDNILFG----KPMD---REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 ---~ayv~Q~~~l~-~~Ti~eNI~fg----~~~~---~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
+|||+|+..+. +-|++|||.+. .... .++.+..++..++.+... .....+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 69999999875 67999999952 2221 344555555556654433 234578999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh--cCCcEEEEEecCCCccccCCEEEEEeCCeEE
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL--LRSKTVIYVTHQVEFLPAADLILVMKDGKIT 819 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~--l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~ 819 (1300)
||||||+.+|+|++.||||.+||.++++.+++- +... ..|+|+|+|||+.+....|||++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~l-l~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLEL-LRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999864 4443 2478999999999999999999999999954
No 335
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2e-36 Score=386.18 Aligned_cols=338 Identities=25% Similarity=0.386 Sum_probs=228.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHccCC--CEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccccCCEEE
Q 000755 735 IGERGINLSGGQKQRIQIARALYQDA--DIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPAADLIL 811 (1300)
Q Consensus 735 ige~g~~LSGGQkqRiaLARAly~~~--~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~~d~i~ 811 (1300)
.++...+|||||+|||+|||||.++| ++|||||||++||++....+++ ++..+ .+|+|||+|+|+++.+..||+|+
T Consensus 481 l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~-~L~~L~~~G~TVIvVeHd~~~i~~aD~vi 559 (924)
T TIGR00630 481 LSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLIN-TLKRLRDLGNTVIVVEHDEETIRAADYVI 559 (924)
T ss_pred cCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHH-HHHHHHhCCCEEEEEECCHHHHhhCCEEE
Confidence 57788899999999999999999986 8999999999999999998875 44443 35899999999999998999999
Q ss_pred EE------eCCeEEEecChHHHHhcCchHHHHHHHHHHHhhhhcccCCCCccccccccccCCCccccccccccCcccccc
Q 000755 812 VM------KDGKITQAGKYNDILNSGTDFMVLVGAHQQALSALDSIEGGPVSERISMNKENGGMDTTNGVTMKEGNEDIQ 885 (1300)
Q Consensus 812 ~l------~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~lp~grnr~s 885 (1300)
+| ++|+|++.|+++++........
T Consensus 560 ~LgpgaG~~~G~Iv~~g~~~el~~~~~~lt-------------------------------------------------- 589 (924)
T TIGR00630 560 DIGPGAGIHGGEVVASGTPEEILANPDSLT-------------------------------------------------- 589 (924)
T ss_pred EecccccCCCCEEeeccCHHHHhcCchhee--------------------------------------------------
Confidence 99 8999999999887643210000
Q ss_pred ccchhhhhhhHHHHHHHHHHhhhhhhHHHHHHHHhhchHHHHHhcchHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 000755 886 TDKVDEQYYIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVDGYSRPKFHIAGAMEWLCFRLD 965 (1300)
Q Consensus 886 ~D~v~~~~y~~~~r~l~rl~~~~~sp~~~~~~E~l~G~~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 965 (1300)
..|+
T Consensus 590 ------~~~l---------------------------------------------------------------------- 593 (924)
T TIGR00630 590 ------GQYL---------------------------------------------------------------------- 593 (924)
T ss_pred ------eecc----------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCC
Q 000755 966 MLSSLTFAFSLVLLISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYTCISSEPPLVIEESRP 1045 (1300)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~e~~~~~~~~~~ 1045 (1300)
.+.. + ...+. ...+
T Consensus 594 ------------------~~~~-------------------------------------~----~~~~~-------~~~~ 607 (924)
T TIGR00630 594 ------------------SGKK-------------------------------------K----IEVPK-------ERRP 607 (924)
T ss_pred ------------------cccc-------------------------------------c----ccccc-------cccC
Confidence 0000 0 00000 0001
Q ss_pred CCCCCCCceEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHh------cCCC----C-------
Q 000755 1046 DCSWPTHGEVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLF------RIVE----P------- 1108 (1300)
Q Consensus 1046 ~~~wp~~g~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~------gl~~----p------- 1108 (1300)
+....++++|++. ..|+|+||+|++||++||+|+||||||||++-.+ ++.+ |
T Consensus 608 ----~~~~~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~ 676 (924)
T TIGR00630 608 ----GNGKFLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIE 676 (924)
T ss_pred ----CCcceEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccc
Confidence 1122589999873 2599999999999999999999999999998332 1111 1
Q ss_pred ----CcceEEECCeecCCCC----------HHHHhcccEEEcCC------CCCCcc--------------cHHHhcCCC-
Q 000755 1109 ----TAGEIVIDGINISSIG----------LHDLRSRLSIIPQD------PTMFEG--------------TVRNNLDPL- 1153 (1300)
Q Consensus 1109 ----~~G~I~idg~di~~i~----------~~~lr~~i~~vpQ~------~~lf~g--------------Tvr~Nl~~~- 1153 (1300)
-.--|.||-.+|..-+ ...+|.-++=.|+- +..|+- .+.-++.+.
T Consensus 677 ~~~~~~~~v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~ 756 (924)
T TIGR00630 677 GLEHLDKVIHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLP 756 (924)
T ss_pred cccCCCceEEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCC
Confidence 1112455544443211 12345555444431 122221 111011000
Q ss_pred -----------CCC--------------------CHHHHHHHHHHc-CCcHHHHhh-cCCCcc-ccccCCCCCChhHHHH
Q 000755 1154 -----------EEY--------------------KDEEIWEALDKC-QLGDEVRNK-EGKLDS-RVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1154 -----------~~~--------------------~d~~i~~~l~~~-~l~~~i~~~-~~gLdt-~v~e~G~~LSgGqrQr 1199 (1300)
..+ +-+|..+..+.. .+.+....+ .-||+. .++.....|||||+||
T Consensus 757 ~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QR 836 (924)
T TIGR00630 757 DVYVPCEVCKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQR 836 (924)
T ss_pred CcccCCCCcCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHH
Confidence 001 111121211111 011111100 125554 3677788999999999
Q ss_pred HHHHHHHcc---CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEE------eCCEEEE
Q 000755 1200 VCLGRVLLK---KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLL------SHGIIEE 1269 (1300)
Q Consensus 1200 l~LARall~---~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl------~~G~i~e 1269 (1300)
++|||+|++ +|+++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++
T Consensus 837 l~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~ 916 (924)
T TIGR00630 837 IKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVA 916 (924)
T ss_pred HHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEE
Confidence 999999997 599999999999999999999999999875 478999999999999889999999 7999999
Q ss_pred ecChhhH
Q 000755 1270 YDSPTKL 1276 (1300)
Q Consensus 1270 ~g~~~~l 1276 (1300)
.|+|+++
T Consensus 917 ~G~~~~l 923 (924)
T TIGR00630 917 SGTPEEV 923 (924)
T ss_pred eCCHHHh
Confidence 9999876
No 336
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-37 Score=330.15 Aligned_cols=172 Identities=32% Similarity=0.510 Sum_probs=158.4
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCC--HHHHhccc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIG--LHDLRSRL 1132 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~--~~~lr~~i 1132 (1300)
|+++|++++|+. +++++|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ....++.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 478999999965 35999999999999999999999999999999999999999999999999998775 56678899
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
+|+||+|.+|.+ |+++|+... ||+|||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998642 79999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCE
Q 000755 1212 VLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGI 1266 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~ 1266 (1300)
++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998654 5899999999999986 99999999985
No 337
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=6.8e-37 Score=344.79 Aligned_cols=222 Identities=20% Similarity=0.328 Sum_probs=182.9
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCee-----cCCCCHHH-
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGIN-----ISSIGLHD- 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~d-----i~~i~~~~- 1127 (1300)
.|+++|++++|++. .+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.+ +...+..+
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGGG--KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCCc--eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 58999999999753 58999999999999999999999999999999999999999999999987 76666543
Q ss_pred ---HhcccEEEcCCCC--CC-cccHHHhcCC----CCC----CCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCC
Q 000755 1128 ---LRSRLSIIPQDPT--MF-EGTVRNNLDP----LEE----YKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWS 1193 (1300)
Q Consensus 1128 ---lr~~i~~vpQ~~~--lf-~gTvr~Nl~~----~~~----~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LS 1193 (1300)
.++.++|+||++. ++ ..|+.+|+.. ... ..++++.+.++..++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 2467999999985 22 3477888631 111 12345566677766642 12334557899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEe
Q 000755 1194 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEY 1270 (1300)
Q Consensus 1194 gGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~ 1270 (1300)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ +.|||++||+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988642 7899999999999986 999999999999999
Q ss_pred cChhhHHhcCCChHHHH
Q 000755 1271 DSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1271 g~~~~l~~~~~~~f~~l 1287 (1300)
|+++++.+++...|.++
T Consensus 231 ~~~~~~~~~~~~~~~~~ 247 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQL 247 (253)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987655555443
No 338
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.3e-37 Score=349.10 Aligned_cols=221 Identities=25% Similarity=0.344 Sum_probs=183.4
Q ss_pred eEEEEeeeeeeCCC-------CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH
Q 000755 1054 EVDILNLQVRYAPH-------LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~-------~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~ 1126 (1300)
.|+++||+++|+.. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 48999999999741 24699999999999999999999999999999999999999999999999998876553
Q ss_pred ---HHhcccEEEcCCCC--CCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1127 ---DLRSRLSIIPQDPT--MFE-GTVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1127 ---~lr~~i~~vpQ~~~--lf~-gTvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
.+|++++|+||++. ++. .|+++|+... .... .+.+.++++.+++... .....+..|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDS----------VLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChh----------HhhCCCccC
Confidence 46788999999983 443 5999997421 1111 1235566666665321 223455789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|+|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999988653 7899999999999987 99999999999999
Q ss_pred ecChhhHHhcCCChHH
Q 000755 1270 YDSPTKLLENKSSSFA 1285 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f~ 1285 (1300)
.|+++++... ++.+.
T Consensus 233 ~g~~~~~~~~-~~~~~ 247 (268)
T PRK10419 233 TQPVGDKLTF-SSPAG 247 (268)
T ss_pred eCChhhccCC-CCHHH
Confidence 9999998853 44443
No 339
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=361.82 Aligned_cols=202 Identities=28% Similarity=0.431 Sum_probs=172.8
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 684 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ay 684 (1300)
.++++|++++|+. +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4889999999941 357999999999999999999999999999999999999999999999883 799
Q ss_pred EecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
|+|++.+|. .||+|||.|+.. .+. ++.+++++..++.+..+ ....+||||||||++|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLD-----------RKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHHHHH
Confidence 999999984 699999999753 222 34556666666654443 34468999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
+.+|+++|||||||+||+.++..+.+.+ ..+.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++....
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 9999999999999999999999887654 44332 789999999998765 59999999999999999999987653
No 340
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-37 Score=328.58 Aligned_cols=170 Identities=30% Similarity=0.546 Sum_probs=157.0
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|+.. ++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 4689999999753 5999999999999999999999999999999999999999999999999987655 567889999
Q ss_pred EcCCCCCCcc-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000755 1135 IPQDPTMFEG-TVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVL 1213 (1300)
Q Consensus 1135 vpQ~~~lf~g-Tvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iL 1213 (1300)
+||++.+|.+ |+++|+. ||+|||||++|||||+++|+++
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999998876 9999973 7999999999999999999999
Q ss_pred EEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEE
Q 000755 1214 VLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGII 1267 (1300)
Q Consensus 1214 lLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i 1267 (1300)
+|||||++||+.+.+.+.+.|++.. ++.|+|++||+.+.+.. ||++++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999865 36899999999999986 999999999974
No 341
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.4e-37 Score=360.12 Aligned_cols=202 Identities=25% Similarity=0.386 Sum_probs=170.8
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
|+++|++++|+.+. ..++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 347999999999999999999999999999999999999999999999873
Q ss_pred --EEEEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 682 --KAYVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 682 --~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
++|++|++.++. .|++|||.|+.. .+. ++..++++..++.+.. ......||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-----------~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-----------DSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHHH
Confidence 699999999885 799999998642 222 2344555555554332 3456789999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
|||||..+|+++|||||||+||+.+...+.+ ++..+. .+.|+|+|||+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~-lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILE-LLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999998875 454443 27899999999999865 9999999999999999999987
Q ss_pred hc
Q 000755 829 NS 830 (1300)
Q Consensus 829 ~~ 830 (1300)
..
T Consensus 230 ~~ 231 (343)
T TIGR02314 230 SH 231 (343)
T ss_pred cC
Confidence 54
No 342
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.9e-37 Score=341.95 Aligned_cols=202 Identities=23% Similarity=0.340 Sum_probs=173.9
Q ss_pred EEEEeeeeeeCCC--CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH---HHh
Q 000755 1055 VDILNLQVRYAPH--LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH---DLR 1129 (1300)
Q Consensus 1055 i~~~~v~~~y~~~--~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~---~lr 1129 (1300)
++++|+++.|+++ ...+|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999999753 14699999999999999999999999999999999999999999999999999776643 357
Q ss_pred cccEEEcCCCCCCc-ccHHHhcCCCC----CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1130 SRLSIIPQDPTMFE-GTVRNNLDPLE----EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~-gTvr~Nl~~~~----~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
+.++|+||++.+|. .|+.+|+.+.. ..+ ++.+.++++++++.+...+.+ .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 88999999999887 59999986421 122 234667788888766554443 47899999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhccCEEEEEeCCEE
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGII 1267 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~~D~v~vl~~G~i 1267 (1300)
+||||++++|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999988653 6999999999986655999999999986
No 343
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-37 Score=356.04 Aligned_cols=205 Identities=26% Similarity=0.423 Sum_probs=171.1
Q ss_pred ceEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------
Q 000755 615 TAIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------ 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------ 680 (1300)
..|+++|++|+|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999997422 24699999999999999999999999999999999999999999999875
Q ss_pred -----------------eEEEEecCC--cCCCCCHHHHHhcCCC---CCHHH----HHHHHHHhcchHHHhhccCCCccc
Q 000755 681 -----------------TKAYVAQSP--WIQSGNIEDNILFGKP---MDREK----YDRVLEACSLKKDLEILSFGDQTV 734 (1300)
Q Consensus 681 -----------------~~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~~~----~~~vl~~~~l~~dl~~l~~Gd~t~ 734 (1300)
.++||+|+| ++++.|++|||.|+.. .+.++ ..+.++.+++.. ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~ 169 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------SY 169 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------hH
Confidence 158999998 7889999999998742 23222 223333333321 23
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccc-cCCEEEE
Q 000755 735 IGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLP-AADLILV 812 (1300)
Q Consensus 735 ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~-~~d~i~~ 812 (1300)
.++.+.+||||||||++|||||.++|+++||||||++||+.+++.+++ ++..+ .+++|+|+|||+++++. .||+|++
T Consensus 170 ~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~-~L~~l~~~g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 170 LERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQ-LILDAKANNKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEE
Confidence 567788999999999999999999999999999999999999988875 44443 35899999999999875 5999999
Q ss_pred EeCCeEEEecChHHHHhc
Q 000755 813 MKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 813 l~~G~i~~~g~~~~l~~~ 830 (1300)
|++|++++.|+++++...
T Consensus 249 l~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 249 MDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EECCEEEEeCCHHHHhcC
Confidence 999999999999988654
No 344
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-37 Score=343.23 Aligned_cols=228 Identities=26% Similarity=0.416 Sum_probs=188.4
Q ss_pred EEEEeeeeeeCCCC--CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC-C----CcceEEECCeecCCCCHHH
Q 000755 1055 VDILNLQVRYAPHL--PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE-P----TAGEIVIDGINISSIGLHD 1127 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~--~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~-p----~~G~I~idg~di~~i~~~~ 1127 (1300)
++++|+++.|.... ..+++||||++++||++||||.|||||||+.++|+|+++ | .+|+|.++|.|+.+++.++
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 68999999997542 368999999999999999999999999999999999998 3 6799999999999999875
Q ss_pred Hh----cccEEEcCCCCC-Ccc--cHHHhc----CCCCCC-C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCC
Q 000755 1128 LR----SRLSIIPQDPTM-FEG--TVRNNL----DPLEEY-K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGEN 1191 (1300)
Q Consensus 1128 lr----~~i~~vpQ~~~l-f~g--Tvr~Nl----~~~~~~-~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~ 1191 (1300)
+| ++|++|||||.- |+- ||.+-+ ...... + .+...+.|+.+++.+--+ .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~--------~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPER--------RLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHH--------HHhhCCcc
Confidence 43 379999999842 322 555443 211111 1 235778899999865311 12223467
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEE
Q 000755 1192 WSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIE 1268 (1300)
Q Consensus 1192 LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~ 1268 (1300)
||||||||+.||.||+.+|++||.||||++||..+.++|.+.|++.. .+.|+|+||||+..+.. ||||+||.+|+|+
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 89999999999999999999999999999999999999999999866 37999999999999988 9999999999999
Q ss_pred EecChhhHHhcCCChHHHHHHH
Q 000755 1269 EYDSPTKLLENKSSSFAQLVAE 1290 (1300)
Q Consensus 1269 e~g~~~~l~~~~~~~f~~l~~~ 1290 (1300)
|.|+.+++++++...|.+..-.
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll~ 255 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLLN 255 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHHH
Confidence 9999999999988777665443
No 345
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-37 Score=343.25 Aligned_cols=199 Identities=31% Similarity=0.406 Sum_probs=166.7
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 680 (1300)
++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 46899999996 35799999999999999999999999999999999999999999999876
Q ss_pred eEEEEecCCcCCCC-CHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 681 TKAYVAQSPWIQSG-NIEDNILFGKP----MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~~-Ti~eNI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
.++|++|++.++.. |++||+.++.. .+. ++..++++.+++... ......+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGA-----------EDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHH
Confidence 26899999988875 99999987632 222 233444555544322 23455689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
||||+..+|+++||||||++||+.+...+.+ .+..+. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDD-LIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 9999999999999999999999999888875 454443 37899999999998765 9999999999999999998876
Q ss_pred hc
Q 000755 829 NS 830 (1300)
Q Consensus 829 ~~ 830 (1300)
..
T Consensus 226 ~~ 227 (235)
T cd03261 226 AS 227 (235)
T ss_pred CC
Confidence 54
No 346
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=8.9e-37 Score=342.82 Aligned_cols=208 Identities=29% Similarity=0.421 Sum_probs=179.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 5899999999975 3599999999999999999999999999999999999999999999987 34799
Q ss_pred EEcCCCCCCc---ccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1134 IIPQDPTMFE---GTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1134 ~vpQ~~~lf~---gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
|+||++.++. .|+++|+.......++++.++++.+++.+..... ...||||||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDAP-----------MQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhCC-----------hhhCCHHHHHHHHHHHHHhcCC
Confidence 9999997764 3888887543344567788999999987655432 3578999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCChHHHH
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSSSFAQL 1287 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~l 1287 (1300)
++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++ ++++.|+++++.++ ..+.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHH
Confidence 99999999999999999999999987643 7899999999999977 999999965 79999999998743 345554
Q ss_pred H
Q 000755 1288 V 1288 (1300)
Q Consensus 1288 ~ 1288 (1300)
+
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 4
No 347
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-37 Score=335.93 Aligned_cols=221 Identities=27% Similarity=0.400 Sum_probs=193.5
Q ss_pred eEEEEeeeeeeCCCC----------------------CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcc
Q 000755 1054 EVDILNLQVRYAPHL----------------------PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAG 1111 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~----------------------~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G 1111 (1300)
.|+++||++-|+.+. ..-++|+||+|+.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 578888888776432 1347899999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCCHHHHh----cccEEEcCCCCCCcc-cHHHhcCCCCC---CC----HHHHHHHHHHcCCcHHHHhhcC
Q 000755 1112 EIVIDGINISSIGLHDLR----SRLSIIPQDPTMFEG-TVRNNLDPLEE---YK----DEEIWEALDKCQLGDEVRNKEG 1179 (1300)
Q Consensus 1112 ~I~idg~di~~i~~~~lr----~~i~~vpQ~~~lf~g-Tvr~Nl~~~~~---~~----d~~i~~~l~~~~l~~~i~~~~~ 1179 (1300)
+|++||.|+..++.++|| ++++.|+|..-||+. ||.+|..+.-+ .. .+...++|+.+||.++-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999988764 479999999999876 99999876422 22 3446779999999999887775
Q ss_pred CCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-c
Q 000755 1180 KLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-S 1256 (1300)
Q Consensus 1180 gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~ 1256 (1300)
.||||+|||+.|||||..+|+||+||||+|+|||--+..+|+-|.+..+ ++||++||||+++... .
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 5699999999999999999999999999999999999999998877543 6899999999999988 9
Q ss_pred CEEEEEeCCEEEEecChhhHHhcCCChHH
Q 000755 1257 DMVLLLSHGIIEEYDSPTKLLENKSSSFA 1285 (1300)
Q Consensus 1257 D~v~vl~~G~i~e~g~~~~l~~~~~~~f~ 1285 (1300)
|||..|++|+|+..|+|+|++.+|...|-
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV 261 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYV 261 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHH
Confidence 99999999999999999999988765543
No 348
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-37 Score=337.51 Aligned_cols=199 Identities=24% Similarity=0.348 Sum_probs=169.2
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCC----CHHHHhcc
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSI----GLHDLRSR 1131 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i----~~~~lr~~ 1131 (1300)
++ ||+++|++. .+ |+||+|++ |++||+|+||||||||+++|+|+++|++|+|.++|.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 44 899999864 24 99999999 99999999999999999999999999999999999988643 23456788
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCCC-CC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPLE-EY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRV 1205 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~~-~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARa 1205 (1300)
++|+||++.+|.. |+++|+.... .. .++++.++++.+++.+... ....+||||||||++||||
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~a 145 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLN-----------RYPAQLSGGEKQRVALARA 145 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhh-----------cCcccCCHHHHHHHHHHHH
Confidence 9999999998864 9999986421 11 2335667788887754433 3456799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1206 LLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1206 ll~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
++.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 146 LAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998643 6899999999999976 9999999999998865
No 349
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=8.6e-37 Score=331.80 Aligned_cols=185 Identities=25% Similarity=0.350 Sum_probs=163.1
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcC--CCCCcceEEECCeecCCCCHHHH-hcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRI--VEPTAGEIVIDGINISSIGLHDL-RSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl--~~p~~G~I~idg~di~~i~~~~l-r~~ 1131 (1300)
++++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+ ++|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 468999999974 3599999999999999999999999999999999999 58999999999999988776554 456
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCC
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKS 1210 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~ 1210 (1300)
++|+||++.+|++ |+++|+. . ...+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------Y-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------h-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999998876 6666550 0 11468999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhh--ccCEEEEEeCCEEEEecChhhHH
Q 000755 1211 KVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVI--DSDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1211 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~--~~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
++++|||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||++++|++|++++.| +.++.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999998653 689999999999998 59999999999999999 55554
No 350
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=346.65 Aligned_cols=209 Identities=24% Similarity=0.336 Sum_probs=175.3
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ...+.+++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 58999999999643 359999999999999999999999999999999999999999999999998742 11234699
Q ss_pred EEcCCCCC---CcccHHHhcCCC--C---------CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1134 IIPQDPTM---FEGTVRNNLDPL--E---------EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1134 ~vpQ~~~l---f~gTvr~Nl~~~--~---------~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
|+||++.+ +..++++|+... . ...++.+.++++.+++.+...+ ...+||||||||
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgG~~qr 150 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHR-----------QIGELSGGQKKR 150 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcC-----------CcccCCHHHHHH
Confidence 99999865 345788887421 0 0112346678888888654322 235699999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+++++ +|++++.|+++++.
T Consensus 151 v~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 151 VFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 999999999999999999999999999999999998864 37899999999999876 9999777 89999999999986
Q ss_pred h
Q 000755 1278 E 1278 (1300)
Q Consensus 1278 ~ 1278 (1300)
+
T Consensus 230 ~ 230 (272)
T PRK15056 230 T 230 (272)
T ss_pred C
Confidence 4
No 351
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-36 Score=335.12 Aligned_cols=198 Identities=48% Similarity=0.886 Sum_probs=178.3
Q ss_pred EEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-----------------
Q 000755 618 EIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------------- 680 (1300)
Q Consensus 618 ~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------------- 680 (1300)
.+.|++|+|+.. .++++|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 567899999733 5799999999999999999999999999999999999999999999865
Q ss_pred eEEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCC
Q 000755 681 TKAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDA 760 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~ 760 (1300)
.++|++|+|.+++.|++||+.++.+.+.++.+++++.+++.+.++.+|.|++|.++....+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 26899999999999999999998776677778899999999889999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHH-HHHhhc-CCcEEEEEecCCCccccCCEEEEEeCCe
Q 000755 761 DIYLFDDPFSAVDAHTGSHLFKE-VLLGLL-RSKTVIYVTHQVEFLPAADLILVMKDGK 817 (1300)
Q Consensus 761 ~illLDep~saLD~~t~~~i~~~-~~~~~l-~~~TvIlvtH~~~~l~~~d~i~~l~~G~ 817 (1300)
+++||||||++||+.+...+.+. .+.... .++|+|++||+.+.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999998888763 444332 3689999999999988899999999884
No 352
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-37 Score=357.12 Aligned_cols=202 Identities=26% Similarity=0.392 Sum_probs=171.8
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EE
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 683 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~a 683 (1300)
..|+++|++++|. +.++|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|. ++
T Consensus 5 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 5 NFVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred cEEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3699999999996 356899999999999999999999999999999999999999999999883 69
Q ss_pred EEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHH
Q 000755 684 YVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 755 (1300)
Q Consensus 684 yv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARA 755 (1300)
||+|++.+|. .|++|||.|+.. .+. ++.+++++..++... ......+|||||||||+||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHH
Confidence 9999999985 599999999743 222 344455555555432 244567899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 756 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 756 ly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
|+.+|+++|||||||+||+.++..+.+. +..+.+ ++|+|+|||+.+.+. .||+|++|++|+|++.|+++++....
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999988654 444433 789999999999865 59999999999999999999987643
No 353
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.2e-37 Score=338.36 Aligned_cols=203 Identities=26% Similarity=0.333 Sum_probs=169.4
Q ss_pred EEEEeeeeeeCCC--CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC---CCcceEEECCeecCCCCHHHHh
Q 000755 1055 VDILNLQVRYAPH--LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE---PTAGEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1055 i~~~~v~~~y~~~--~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~---p~~G~I~idg~di~~i~~~~lr 1129 (1300)
++++||+++|+.. .+++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.++|.++. ....|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5789999999765 3679999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cccEEEcCCCCCCcc-cHHHhcCCCC-----CCCHH-----HHHH-HHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1130 SRLSIIPQDPTMFEG-TVRNNLDPLE-----EYKDE-----EIWE-ALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~g-Tvr~Nl~~~~-----~~~d~-----~i~~-~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
++++|+||++.+|.+ |+++|+.+.. ....+ .+.+ .++.+++.+ .......+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTR-----------IGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchh-----------hhcccccCcCHHHH
Confidence 889999999999987 9999996321 11111 1222 344444322 22334568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCCh-hhhhc-cCEEEEEeCCEEEEec
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRI-TSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl-~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
||++|||||+++|++|||||||++||+.+...+.+.|++.. .+.|+|++||++ +.+.. ||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999999864 468999999998 46665 9999999999999865
No 354
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-37 Score=332.14 Aligned_cols=190 Identities=24% Similarity=0.300 Sum_probs=161.6
Q ss_pred eEEEEeeeeeeCCC--CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCC---CCcceEEECCeecCCCCHHHH
Q 000755 1054 EVDILNLQVRYAPH--LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVE---PTAGEIVIDGINISSIGLHDL 1128 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~--~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~---p~~G~I~idg~di~~i~~~~l 1128 (1300)
.+.++|+++.|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 4579999999999999999999999999999999999999 89999999999987664 456
Q ss_pred hcccEEEcCCCCCCcc-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHc
Q 000755 1129 RSRLSIIPQDPTMFEG-TVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLL 1207 (1300)
Q Consensus 1129 r~~i~~vpQ~~~lf~g-Tvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall 1207 (1300)
|++++|+||++.+|.+ |+++|+.+.... . . .+....||+|||||++|||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~--------------~----~~~~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K--------------G----NEFVRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c--------------c----ccchhhCCHHHHHHHHHHHHHh
Confidence 7789999999988875 999998642110 0 1 2234579999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEE-eCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1208 KKSKVLVLDEATASVDTATDNLIQQTLRQHFS--DCTVITI-AHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1208 ~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~i-aHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
++|++|||||||++||+.+.+.+.+.|++..+ +.|+|++ +|+.+.+.. ||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998653 4666665 455677765 9999999999998764
No 355
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.7e-37 Score=331.05 Aligned_cols=182 Identities=27% Similarity=0.398 Sum_probs=160.9
Q ss_pred eEEEEeeeeeeCCC----CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCcceEEECCeecCCCCHHH
Q 000755 1054 EVDILNLQVRYAPH----LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIV--EPTAGEIVIDGINISSIGLHD 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~----~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~--~p~~G~I~idg~di~~i~~~~ 1127 (1300)
.|+++|++++|+.. ..++|+|+||++++||+++|+|+||||||||+++|+|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999864 36
Q ss_pred HhcccEEEcCCCCCCcc-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHH
Q 000755 1128 LRSRLSIIPQDPTMFEG-TVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVL 1206 (1300)
Q Consensus 1128 lr~~i~~vpQ~~~lf~g-Tvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARal 1206 (1300)
.|++++|+||++.+|.+ |+++|+.... ... .||+|||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~~---------------------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KLR---------------------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hhc---------------------cCCHHHHHHHHHHHHH
Confidence 67889999999988875 9999984210 000 6899999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChh-hhhc-cCEEEEEeCCEEEEec
Q 000755 1207 LKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRIT-SVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1207 l~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~-~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
+++|++++|||||++||+.+.+.+.+.|++.. +++|+|++||+++ .+.+ ||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999865 4789999999997 5665 9999999999998764
No 356
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.9e-36 Score=335.36 Aligned_cols=204 Identities=28% Similarity=0.460 Sum_probs=177.7
Q ss_pred cceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------
Q 000755 614 ETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 680 (1300)
Q Consensus 614 ~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 680 (1300)
...++++|++++|+.....++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4569999999999743234799999999999999999999999999999999999999999999987
Q ss_pred eEEEEecCCcCCCCCHHHHHhcCCC-CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 000755 681 TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 759 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~~Ti~eNI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~ 759 (1300)
.++|++|++.++..|++||+.++.. ....++.+..+...+.+.++.++.|.++.++++..+||||||||++||||++++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 2699999999999999999998754 233333444455567778888888888889999999999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeE
Q 000755 760 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKI 818 (1300)
Q Consensus 760 ~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i 818 (1300)
|+++||||||++||+++.+.+.+ .+..+.+++|+|++||+++.+..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQ-ALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999888865 55555567899999999999888999999999974
No 357
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=348.43 Aligned_cols=202 Identities=25% Similarity=0.436 Sum_probs=170.6
Q ss_pred EEEEeEEEEecCCCC--CCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------
Q 000755 617 IEIVDGNFAWDISSN--NPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 681 (1300)
|+++|++|+|+.... +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999963221 36999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEecCC--cCCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 682 ----KAYVAQSP--WIQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 682 ----~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
++||+|+| .++..|+.|||.|+.. .+. +++.++++..++..++ ......+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHHH
Confidence 58999998 7888999999998743 222 2455555555553222 24566789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 826 (1300)
|++|||||+.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQ-LFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999888875 454443 4799999999999885 599999999999999999999
Q ss_pred HHh
Q 000755 827 ILN 829 (1300)
Q Consensus 827 l~~ 829 (1300)
+..
T Consensus 231 ~~~ 233 (288)
T PRK13643 231 VFQ 233 (288)
T ss_pred HHc
Confidence 865
No 358
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=348.42 Aligned_cols=205 Identities=26% Similarity=0.435 Sum_probs=171.4
Q ss_pred eEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------
Q 000755 616 AIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 680 (1300)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999996322 24799999999999999999999999999999999999999999999877
Q ss_pred --eEEEEecCC--cCCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 --TKAYVAQSP--WIQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 --~~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++||+|+| .+++.|++|||.|+.. .+. ++.+++++.+++. +.+..+.....||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHH
Confidence 258999998 5778999999998642 232 2344555555553 1123456678999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 826 (1300)
++|||||+.+|+++||||||++||+.+...+++ ++..+. .++|+|+|||+++.+. .||+|++|++|++++.|+.++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILN-KIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999988865 555543 3789999999999875 599999999999999999998
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 232 ~~~~ 235 (287)
T PRK13637 232 VFKE 235 (287)
T ss_pred HHhC
Confidence 8653
No 359
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=7.6e-37 Score=327.32 Aligned_cols=172 Identities=27% Similarity=0.466 Sum_probs=155.7
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH-HHHhccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL-HDLRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~-~~lr~~i 1132 (1300)
.++++|++++| +|+++||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 7999999999999999999999999999999999999999999999999987764 3467789
Q ss_pred EEEcCCC---CCC-cccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1133 SIIPQDP---TMF-EGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1133 ~~vpQ~~---~lf-~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
+|+||++ .++ ..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 344 4699999854210 79999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEE
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGII 1267 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i 1267 (1300)
+|++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999864 47899999999999988 999999999974
No 360
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5.5e-37 Score=358.93 Aligned_cols=190 Identities=28% Similarity=0.376 Sum_probs=161.8
Q ss_pred CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-----------------eEEEEecCCcCCC
Q 000755 631 NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------------TKAYVAQSPWIQS 693 (1300)
Q Consensus 631 ~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------------~~ayv~Q~~~l~~ 693 (1300)
.+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++||+|++++|.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 35689999999999999999999999999999999999999999999987 3799999999996
Q ss_pred -CCHHHHHhcCCCC---CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEE
Q 000755 694 -GNIEDNILFGKPM---DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLF 765 (1300)
Q Consensus 694 -~Ti~eNI~fg~~~---~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illL 765 (1300)
.||+|||.|+.++ +. ++..++++..+|.. ..++...+|||||||||+|||||+++|+|+||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~-----------~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEE-----------YEHRYPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCch-----------hhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 5999999987542 22 23334444444433 34566779999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 766 DDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 766 Dep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
|||||+||+.+++.+++.+..... .++|+|+|||+++.+. .||+|++|++|++++.|++++++...
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 999999999999999876554322 3899999999999865 59999999999999999999988653
No 361
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.6e-37 Score=337.99 Aligned_cols=197 Identities=29% Similarity=0.436 Sum_probs=164.7
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccc-----cCCccEEEEcCe----------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV-----PKISGTLKLCGT---------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~-----~~~~G~i~~~g~---------- 681 (1300)
|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.+ +|++|+|.++|.
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 46899999996 247999999999999999999999999999999999999 999999998772
Q ss_pred -----EEEEecCCcCCCCCHHHHHhcCCCC----C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 682 -----KAYVAQSPWIQSGNIEDNILFGKPM----D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 682 -----~ayv~Q~~~l~~~Ti~eNI~fg~~~----~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
++|++|++.+++.|++||+.++... . +++..++++.+++.+.+...++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 6899999998888999999876321 1 2344555666666543322110 5789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
|++||||++.+|+++||||||++||+.+.+.+++ .+....+.+|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEE-LIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 9999999999999999999999999999988875 55554444899999999998765 99999999999999988654
No 362
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=347.91 Aligned_cols=204 Identities=27% Similarity=0.451 Sum_probs=171.7
Q ss_pred eEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------
Q 000755 616 AIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 681 (1300)
.++++|++|+|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996322 246999999999999999999999999999999999999999999999873
Q ss_pred -----EEEEecCC--cCCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 -----KAYVAQSP--WIQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 -----~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
++||+|+| .+++.|++|||.|+.. .+. ++.+++++.++|..++ ......+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHH
Confidence 68999998 5788899999998742 222 3455666666664332 1345678999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecCh
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY 824 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 824 (1300)
||++|||||+.+|+++||||||++||+.+...+.+ ++..+. .+.|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~-~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMME-MFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999888865 455443 37899999999998764 999999999999999999
Q ss_pred HHHHhc
Q 000755 825 NDILNS 830 (1300)
Q Consensus 825 ~~l~~~ 830 (1300)
+++.+.
T Consensus 231 ~~~~~~ 236 (290)
T PRK13634 231 REIFAD 236 (290)
T ss_pred HHHhcC
Confidence 888653
No 363
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.6e-36 Score=336.84 Aligned_cols=206 Identities=25% Similarity=0.345 Sum_probs=171.1
Q ss_pred ceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC----CcceEEECCeecCCCCHHHHhcccEEEcCCCC-CC-c-
Q 000755 1071 VLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP----TAGEIVIDGINISSIGLHDLRSRLSIIPQDPT-MF-E- 1143 (1300)
Q Consensus 1071 vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p----~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~-lf-~- 1143 (1300)
+|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... ...+++++|+||++. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57999999999999999999999999999999999999 899999999998654 222458999999995 34 3
Q ss_pred ccHHHhcCC----CCCC---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000755 1144 GTVRNNLDP----LEEY---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLD 1216 (1300)
Q Consensus 1144 gTvr~Nl~~----~~~~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLD 1216 (1300)
.|+.+|+.. .... .++++.++++.+++.+. +......+.+||||||||++||||++++|+|||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 488888631 1111 13457788888887531 11223345689999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHhcCCChHHH
Q 000755 1217 EATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLENKSSSFAQ 1286 (1300)
Q Consensus 1217 EpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~~~~~~f~~ 1286 (1300)
|||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999998653 6899999999999976 9999999999999999999998765555554
No 364
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=337.90 Aligned_cols=199 Identities=32% Similarity=0.454 Sum_probs=167.3
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-----------eEEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------TKAYV 685 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~~ayv 685 (1300)
++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 3 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v 79 (239)
T cd03296 3 IEVRNVSKRFG---DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFV 79 (239)
T ss_pred EEEEeEEEEEC---CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEE
Confidence 78999999996 25799999999999999999999999999999999999999999999987 26999
Q ss_pred ecCCcCCC-CCHHHHHhcCCCC-------CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 686 AQSPWIQS-GNIEDNILFGKPM-------DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 686 ~Q~~~l~~-~Ti~eNI~fg~~~-------~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|+|.++. .|++||+.++... +. ++.++.++..++.+ .......+||||||||++||
T Consensus 80 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 148 (239)
T cd03296 80 FQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDW-----------LADRYPAQLSGGQRQRVALA 148 (239)
T ss_pred ecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHHHHHHHH
Confidence 99998875 6999999986421 21 22334444444432 23455678999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||++.+|+++||||||++||+++.+.+.+ ++..+. .++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 149 RALAVEPKVLLLDEPFGALDAKVRKELRR-WLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 99999999999999999999999888865 555443 27899999999998765 999999999999999999888653
No 365
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-37 Score=316.32 Aligned_cols=212 Identities=27% Similarity=0.405 Sum_probs=185.9
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+.+|++++-.++ .+|+++||++++||.+||+||||||||||+++|.|...|++|++.++|.++++.+..++.++-++
T Consensus 2 i~a~nls~~~~Gr--~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLAGR--RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEeecc--eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 7889999887654 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCC-CcccHHHhcCC----CC---CCCHHH--HHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1135 IPQDPTM-FEGTVRNNLDP----LE---EYKDEE--IWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1135 vpQ~~~l-f~gTvr~Nl~~----~~---~~~d~~--i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
+||+..+ |+-||+|-+.+ .+ +..+++ ..++|.++++..+-.+. -..||||||||+.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----------y~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRD-----------YRTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccc-----------hhhcCchHHHHHHHHH
Confidence 9999876 88899998753 21 222333 57789999886553332 2468999999999999
Q ss_pred HHcc------CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhH
Q 000755 1205 VLLK------KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKL 1276 (1300)
Q Consensus 1205 all~------~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l 1276 (1300)
.|.+ ++++|+||||||+||......+.++.|+.. .++.|+.|-||++.... ||||++|.+||++..|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9976 346999999999999999999999999976 47999999999999876 999999999999999999999
Q ss_pred Hhc
Q 000755 1277 LEN 1279 (1300)
Q Consensus 1277 ~~~ 1279 (1300)
+..
T Consensus 229 lt~ 231 (259)
T COG4559 229 LTD 231 (259)
T ss_pred cCH
Confidence 864
No 366
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.3e-36 Score=340.24 Aligned_cols=211 Identities=23% Similarity=0.284 Sum_probs=177.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcC--CCCCcceEEECCeecCCCCHHHHhc-
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRI--VEPTAGEIVIDGINISSIGLHDLRS- 1130 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl--~~p~~G~I~idg~di~~i~~~~lr~- 1130 (1300)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+ ++|++|+|.+||.++...+....++
T Consensus 7 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNEN--EILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCCE--EeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 59999999999743 599999999999999999999999999999999998 6899999999999998877666554
Q ss_pred ccEEEcCCCCCCcc-cHHHhcCCCC----------CCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCC-CCCh
Q 000755 1131 RLSIIPQDPTMFEG-TVRNNLDPLE----------EYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGE-NWSM 1194 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~g-Tvr~Nl~~~~----------~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~-~LSg 1194 (1300)
.++++||++.+|++ |+++|+.... ... .+.+.++++.+++.+.. ++ .... .|||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~----~~~~~~LSg 154 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSF------LS----RNVNEGFSG 154 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhh------hc----cccccCCCH
Confidence 58999999998876 8888874311 001 13355677777765211 11 2222 4999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc--cCEEEEEeCCEEEEec
Q 000755 1195 GQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID--SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1195 GqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~--~D~v~vl~~G~i~e~g 1271 (1300)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 155 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~ 234 (252)
T CHL00131 155 GEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTG 234 (252)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999865 47899999999999875 8999999999999999
Q ss_pred ChhhH
Q 000755 1272 SPTKL 1276 (1300)
Q Consensus 1272 ~~~~l 1276 (1300)
+++.+
T Consensus 235 ~~~~~ 239 (252)
T CHL00131 235 DAELA 239 (252)
T ss_pred Chhhh
Confidence 98844
No 367
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=323.94 Aligned_cols=204 Identities=26% Similarity=0.458 Sum_probs=171.4
Q ss_pred eEEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------
Q 000755 616 AIEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 681 (1300)
.++++|+++.|+... ..++++||||+|.+||.++|+|+||||||||+++|+|..+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 588999999997321 125999999999999999999999999999999999999999999999983
Q ss_pred -EEEEecCCcC---CCCCHHHHHhc-----CCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 -KAYVAQSPWI---QSGNIEDNILF-----GKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 -~ayv~Q~~~l---~~~Ti~eNI~f-----g~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
+-+|+|||.- ..-||++-|.= |.+-.+++..++++..+|.+... ......|||||+|||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l----------~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFL----------DRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHH----------hcCchhcChhHHHHHHH
Confidence 5799999974 34577776642 22223456778888888876542 34557899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
||||..+|+++|||||||+||+.+...|++ ++..+. .+-|.|+|||++..+.+ ||||+||++|+|++.++..++..
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~Iln-lL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILN-LLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHH-HHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999986 444333 35699999999999987 99999999999999999999886
Q ss_pred c
Q 000755 830 S 830 (1300)
Q Consensus 830 ~ 830 (1300)
.
T Consensus 232 ~ 232 (252)
T COG1124 232 H 232 (252)
T ss_pred C
Confidence 6
No 368
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=329.14 Aligned_cols=181 Identities=24% Similarity=0.336 Sum_probs=159.2
Q ss_pred eEEEEeeeeeeCCC--CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCcceEEECCeecCCCCHHHHh
Q 000755 1054 EVDILNLQVRYAPH--LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIV--EPTAGEIVIDGINISSIGLHDLR 1129 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~--~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~--~p~~G~I~idg~di~~i~~~~lr 1129 (1300)
.|+++|++++|++. .+++|+|+||++++||+++|+|+||||||||+++|+|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999742 246999999999999999999999999999999999986 489999999999885 5667
Q ss_pred cccEEEcCCCCCCcc-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1130 SRLSIIPQDPTMFEG-TVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1130 ~~i~~vpQ~~~lf~g-Tvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
++++|+||++.+|.+ |+++|+.... .++ +||||||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~---------~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSA---------LLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHH---------HHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 889999999988875 9999985210 000 689999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhh-hh-ccCEEEEEeC-CEEEEec
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITS-VI-DSDMVLLLSH-GIIEEYD 1271 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~-i~-~~D~v~vl~~-G~i~e~g 1271 (1300)
+|++|+|||||++||+.+...+.+.|++.. .++|+|++||+++. +. .||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999864 37899999999984 54 4999999999 9999865
No 369
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=344.84 Aligned_cols=203 Identities=29% Similarity=0.448 Sum_probs=172.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 489999999996433356999999999999999999999999999999999999999999999873 5
Q ss_pred EEEecCCc--CCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSPW--IQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+||+|+|. ++..||+|||.|+.. .++ ++..++++..++....+ ....+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 89999984 567899999998742 232 34566677777654433 34468999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||++.+|+++||||||++||+.+.+.+++ ++..+. .++|+|++||+++.+..||+|++|++|+++..|+.+++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIK-TIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999888865 555543 37999999999998878999999999999999999887654
No 370
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.2e-36 Score=325.21 Aligned_cols=177 Identities=33% Similarity=0.506 Sum_probs=160.2
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEE
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSII 1135 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~v 1135 (1300)
+++|++++|+. .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999975 3599999999999999999999999999999999999999999999999999888888888889999
Q ss_pred cCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000755 1136 PQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVL 1215 (1300)
Q Consensus 1136 pQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlL 1215 (1300)
|| +++.+++.+...+ .+.+||+|||||++||||++++|+++||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 6777887665433 3467999999999999999999999999
Q ss_pred eCCCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1216 DEATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1216 DEpTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999988654 6899999999999876 9999999999998753
No 371
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-36 Score=338.39 Aligned_cols=202 Identities=24% Similarity=0.374 Sum_probs=165.9
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------E
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 682 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------~ 682 (1300)
++++|++++|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46899999996 246999999999999999999999999999999999999999999998762 6
Q ss_pred EEEecCCcCCCC-CHHHHHhcCCCCC-------------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 683 AYVAQSPWIQSG-NIEDNILFGKPMD-------------REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 683 ayv~Q~~~l~~~-Ti~eNI~fg~~~~-------------~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
+|++|++.++.. |++|||.++.... .+...+ ...+-++.+ |.....+....+|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARE-----RAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHH-----HHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 899999988875 9999998864211 111111 011222222 3334456677899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
|++||||++.+|++++|||||++||+.+...+++ .+..+. +++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 229 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAE-LIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDE 229 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHH
Confidence 9999999999999999999999999999988876 444433 68999999999999865 99999999999999999888
Q ss_pred HHh
Q 000755 827 ILN 829 (1300)
Q Consensus 827 l~~ 829 (1300)
+..
T Consensus 230 ~~~ 232 (236)
T cd03219 230 VRN 232 (236)
T ss_pred hcc
Confidence 754
No 372
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.2e-36 Score=356.01 Aligned_cols=202 Identities=28% Similarity=0.398 Sum_probs=172.6
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EE
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 683 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~a 683 (1300)
..++++|++++|+ +.++|+|+||++++||+++|+|||||||||||++|+|+++|++|+|.++|. ++
T Consensus 13 ~~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3589999999996 356899999999999999999999999999999999999999999999884 69
Q ss_pred EEecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHH
Q 000755 684 YVAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 755 (1300)
Q Consensus 684 yv~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARA 755 (1300)
||+|++.+|. .||+|||.|+.. .+ .++.+++++..++...++ ....+|||||||||+||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~p~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQ-----------RKPHQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHHHHHH
Confidence 9999999885 599999999753 22 234455666666654443 3446899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 756 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 756 ly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
|+.+|+++|||||||+||++++..+.+. +..+. .+.|+|+|||+.+.+. .||+|++|++|+|++.|++++++...
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999888654 44443 3789999999999865 59999999999999999999987653
No 373
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=9.4e-37 Score=332.93 Aligned_cols=193 Identities=27% Similarity=0.370 Sum_probs=163.8
Q ss_pred EEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH----HHHhccc
Q 000755 1057 ILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL----HDLRSRL 1132 (1300)
Q Consensus 1057 ~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~----~~lr~~i 1132 (1300)
++|+++.|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999974 359999999999999999999999999999999999999999999999999765432 2356789
Q ss_pred EEEcCCCCCCc-ccHHHhcCCCC---CC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1133 SIIPQDPTMFE-GTVRNNLDPLE---EY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1133 ~~vpQ~~~lf~-gTvr~Nl~~~~---~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
+|++|++.+|. .|+++|+.+.. .. .++++.++++..++.+...+ ...+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQ-----------KIYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 99999999987 59999986421 11 23456778888887544322 34679999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEEE
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLLL 1262 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~vl 1262 (1300)
||+++|++|||||||++||+.+.+.+.+.|++.. ++.|+|++||+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999865 378999999999977679999875
No 374
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2.4e-36 Score=339.15 Aligned_cols=205 Identities=22% Similarity=0.306 Sum_probs=175.4
Q ss_pred EEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEE
Q 000755 1056 DILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSII 1135 (1300)
Q Consensus 1056 ~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~v 1135 (1300)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|+|++++ +|+|.+||.++...+...+++.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEe
Confidence 56788875 279999999999999999999999999999999999864 99999999999888888888889999
Q ss_pred cCCCCCC-cccHHHhcCCCCC--CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1136 PQDPTMF-EGTVRNNLDPLEE--YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1136 pQ~~~lf-~gTvr~Nl~~~~~--~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
||++.++ ..|+++|+..... .. .+++.++++.+++.+... .....||+|||||++|||||+.
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~ 143 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKLG-----------RSVNQLSGGEWQRVRLAAVVLQ 143 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHHHhc
Confidence 9998654 5699999875321 11 234667788777754332 2346789999999999999997
Q ss_pred -------CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1209 -------KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1209 -------~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
+|++|||||||++||+.+...+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 144 ~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 144 VWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred cccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999998865 46899999999998876 99999999999999999998864
No 375
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.4e-36 Score=328.03 Aligned_cols=189 Identities=25% Similarity=0.421 Sum_probs=164.1
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------e
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------T 681 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 681 (1300)
..++++|++++|+. ...++++|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~~l~~~~l~~~~~~-~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAP-DLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCC-CCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 46999999999963 224799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 000755 682 KAYVAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDAD 761 (1300)
Q Consensus 682 ~ayv~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ 761 (1300)
++||+|+|.++++|++||+.+...++.++..+.++ ++++..+|||||+||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 79999999999999999998765554433332222 356788999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000755 762 IYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGK 823 (1300)
Q Consensus 762 illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~ 823 (1300)
++||||||++||+.+...+.+ .+....+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQK-TIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999999999999887765 5555556899999999999988899999999999988775
No 376
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.6e-36 Score=355.55 Aligned_cols=201 Identities=34% Similarity=0.430 Sum_probs=171.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 684 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ay 684 (1300)
.++++|++++|+ +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999996 256899999999999999999999999999999999999999999999883 699
Q ss_pred EecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
|+|++-+|. .|++|||.|+.. .+ .++.+++++..++.+. ......+||||||||++|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGS-----------ERKYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCch-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 999999985 799999999743 22 2344455555554432 3456678999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
+.+|+++|||||||+||+.++..+.+. +..+.+ +.|+|+|||+.+.+. .||+|++|++|++++.|+++++....
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTE-IRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999988764 444332 789999999999865 59999999999999999999998653
No 377
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.9e-36 Score=357.98 Aligned_cols=227 Identities=27% Similarity=0.401 Sum_probs=192.5
Q ss_pred eEEEEeeeeeeCCCCC--cceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCC----cceEEECCeecCCCCHHH
Q 000755 1054 EVDILNLQVRYAPHLP--LVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPT----AGEIVIDGINISSIGLHD 1127 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~--~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~----~G~I~idg~di~~i~~~~ 1127 (1300)
-++++|+++.|..... .+++||||+|.+||++||||.|||||||+.++|.|++++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975432 4899999999999999999999999999999999999987 899999999999888766
Q ss_pred Hh----cccEEEcCCCC-CCcc--cHHHhcC----CCCCC----CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCC
Q 000755 1128 LR----SRLSIIPQDPT-MFEG--TVRNNLD----PLEEY----KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENW 1192 (1300)
Q Consensus 1128 lr----~~i~~vpQ~~~-lf~g--Tvr~Nl~----~~~~~----~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~L 1192 (1300)
.| ++|++|||+|. .++. ||.+-+. ..... ..++..+.|+++++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 54 47999999985 4543 6665542 11111 23457778999998665443 2234678
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1193 SMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1193 SgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|||||||+.||+||+.+|++||+||||.+||+.+.++|.+.|++.. .+.++|+|||++..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999865 47899999999999998 99999999999999
Q ss_pred ecChhhHHhcCCChHHHHHH
Q 000755 1270 YDSPTKLLENKSSSFAQLVA 1289 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~f~~l~~ 1289 (1300)
.|+++++++++...|.+..-
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll 255 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLL 255 (539)
T ss_pred ecCHHHHHhccCCcccHHHH
Confidence 99999999988776665543
No 378
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-36 Score=338.28 Aligned_cols=204 Identities=26% Similarity=0.393 Sum_probs=173.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc---CCccEEEEcCe-----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP---KISGTLKLCGT----------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~---~~~G~i~~~g~----------- 681 (1300)
.|+++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 478999999996 2579999999999999999999999999999999999974 68999999873
Q ss_pred --EEEEecCCcCCCCCHHHHHhcCCCC---------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 682 --KAYVAQSPWIQSGNIEDNILFGKPM---------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 682 --~ayv~Q~~~l~~~Ti~eNI~fg~~~---------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
++|++|++.++..|++||+.++... .+++..++++.+++.+.+.. ...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 6999999999999999999876321 12345566777777544432 24567789999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
+||||++++|++++|||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEE-LLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999888764 56555568999999999998764 99999999999999999998865
Q ss_pred c
Q 000755 830 S 830 (1300)
Q Consensus 830 ~ 830 (1300)
.
T Consensus 231 ~ 231 (246)
T PRK14269 231 N 231 (246)
T ss_pred C
Confidence 3
No 379
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.3e-36 Score=370.59 Aligned_cols=212 Identities=22% Similarity=0.368 Sum_probs=184.6
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHh-ccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLR-SRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr-~~i 1132 (1300)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+..+.+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999975 3599999999999999999999999999999999999999999999999999877766654 469
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCCCC---CHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLEEY---KDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~~~---~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
+|+||++.+|.. |+++|+.+.... .++++.++++.+++.+... ....+||||||||++|||||+.
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDLD-----------SSAGSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcccc-----------CChhhCCHHHHHHHHHHHHHHc
Confidence 999999988876 999998753211 2345677788887754322 2335789999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999998864 46899999999999987 99999999999999999988764
No 380
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.6e-36 Score=333.67 Aligned_cols=189 Identities=26% Similarity=0.440 Sum_probs=158.8
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe---------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 681 (1300)
++++|++++|+.. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999632 246999999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCCcCCC-CCHHHHHhcCCC---C----CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 -KAYVAQSPWIQS-GNIEDNILFGKP---M----DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 -~ayv~Q~~~l~~-~Ti~eNI~fg~~---~----~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
++|++|++.++. .|++||+.++.. . .+++..++++.+++.+.. .....+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKA-----------HALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHH
Confidence 699999998875 699999987521 1 123455666666665433 23446899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeE
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKI 818 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i 818 (1300)
|||++++|+++||||||++||+.+.+.+.+ .+..+ .+++|+|+|||+++++.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMR-LFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999988875 44444 347899999999999875 999999999975
No 381
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=345.48 Aligned_cols=204 Identities=25% Similarity=0.465 Sum_probs=169.0
Q ss_pred eEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------
Q 000755 616 AIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 680 (1300)
.++++|++|+|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996322 24799999999999999999999999999999999999999999999887
Q ss_pred ----eEEEEecCC--cCCCCCHHHHHhcCCC---CCHHH----HHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 ----TKAYVAQSP--WIQSGNIEDNILFGKP---MDREK----YDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 ----~~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~~~----~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++||+|+| .++..|+.|||.|+.. ++.++ ..++++.+++.. ...+..+.+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSR----------DVMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHH
Confidence 258999998 5778899999998742 23322 233333333321 123456789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecCh
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKY 824 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 824 (1300)
||++|||||+.+|+++||||||++||+.+...+.+ .+..+. .++|+|+|||+++.+. .||+|++|++|+|++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMR-LLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999988865 455443 4799999999999875 5999999999999999999
Q ss_pred HHHHhc
Q 000755 825 NDILNS 830 (1300)
Q Consensus 825 ~~l~~~ 830 (1300)
+++...
T Consensus 231 ~~~~~~ 236 (286)
T PRK13646 231 KELFKD 236 (286)
T ss_pred HHHHhC
Confidence 887653
No 382
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-36 Score=339.04 Aligned_cols=205 Identities=28% Similarity=0.439 Sum_probs=172.3
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 680 (1300)
..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 3699999999996 2469999999999999999999999999999999999874 5899998876
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC---C-C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP---M-D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~---~-~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
.++|++|++.++..|++||+.++.. . . .++.++.++.+++.+.+. +..+....+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHH
Confidence 2699999999988999999987631 1 1 234455566666543322 23456778999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEE-LIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888865 55555557899999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14242 234 QIFTR 238 (253)
T ss_pred HHHcC
Confidence 88654
No 383
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=356.04 Aligned_cols=200 Identities=31% Similarity=0.436 Sum_probs=170.6
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 684 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ay 684 (1300)
.++++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 488999999996 256999999999999999999999999999999999999999999999873 799
Q ss_pred EecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
|+|++.++. .|++|||.|+.. .+ .++.+++++.+++.+.. .....+||||||||++|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHHHH
Confidence 999999885 599999998743 22 23455566666664333 344568999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
+.+|+++|||||||+||+.+++.+.+. +..+. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999888754 44443 27899999999998764 999999999999999999998754
No 384
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=322.47 Aligned_cols=200 Identities=30% Similarity=0.432 Sum_probs=170.2
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 680 (1300)
.|+++|++..|+ +++.+|+||||+|++||++||+|+|||||||||++|.|..+|++|+|.++|
T Consensus 3 ~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 589999999997 357899999999999999999999999999999999999999999999988
Q ss_pred -eEEEEecCCcCC-CCCHHHHHhcCCC------------CCHHHHHHHH---HHhcchHHHhhccCCCcccccCCCCCCC
Q 000755 681 -TKAYVAQSPWIQ-SGNIEDNILFGKP------------MDREKYDRVL---EACSLKKDLEILSFGDQTVIGERGINLS 743 (1300)
Q Consensus 681 -~~ayv~Q~~~l~-~~Ti~eNI~fg~~------------~~~~~~~~vl---~~~~l~~dl~~l~~Gd~t~ige~g~~LS 743 (1300)
.+||++|++-|- ..|+-+|++.|+- ++++....++ +..++.+.. -.+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A-----------~qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKA-----------YQRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHH-----------HHHhccCC
Confidence 369999999875 5799999998752 3444444443 444443332 34677999
Q ss_pred HHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHh-hcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEe
Q 000755 744 GGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLG-LLRSKTVIYVTHQVEFLP-AADLILVMKDGKITQA 821 (1300)
Q Consensus 744 GGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~-~l~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~ 821 (1300)
|||+|||+|||||+++|+|+|-|||+++|||.+++++++.+... .-.|.|+|+.-|++++.. .||||+-|++|+|++.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 99999999999999999999999999999999999998644322 235799999999999965 5999999999999999
Q ss_pred cChHHHH
Q 000755 822 GKYNDIL 828 (1300)
Q Consensus 822 g~~~~l~ 828 (1300)
|+.+|+-
T Consensus 230 g~~~el~ 236 (258)
T COG3638 230 GPASELT 236 (258)
T ss_pred CChhhhh
Confidence 9998864
No 385
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-36 Score=346.20 Aligned_cols=204 Identities=25% Similarity=0.409 Sum_probs=169.5
Q ss_pred eEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------
Q 000755 616 AIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 680 (1300)
.|+++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999996322 13699999999999999999999999999999999999999999998863
Q ss_pred ------------------------eEEEEecCC--cCCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhc
Q 000755 681 ------------------------TKAYVAQSP--WIQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEIL 727 (1300)
Q Consensus 681 ------------------------~~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l 727 (1300)
.++||+|+| .++..|++|||.|+.. .++ ++..++++.++|..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~---- 157 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDES---- 157 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----
Confidence 258999987 5778899999998742 232 334555555555422
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccc-
Q 000755 728 SFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLP- 805 (1300)
Q Consensus 728 ~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~- 805 (1300)
..+....+||||||||++|||||+.+|+++||||||++||+...+.+.+ .+..+ ..++|+|+|||+++.+.
T Consensus 158 ------~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 158 ------YLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILE-IFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ------hhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeeCHHHHHH
Confidence 1345667899999999999999999999999999999999999888865 44443 34899999999999865
Q ss_pred cCCEEEEEeCCeEEEecChHHHHhc
Q 000755 806 AADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 806 ~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
.||+|++|++|+|++.|+.+++...
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 5999999999999999999988653
No 386
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-36 Score=332.24 Aligned_cols=191 Identities=34% Similarity=0.449 Sum_probs=160.2
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-----------eEEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------TKAYV 685 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~~ayv 685 (1300)
++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 46899999996 25799999999999999999999999999999999999999999999987 36999
Q ss_pred ecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 686 AQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 686 ~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
+|++.++. .|++||+.++.. .+. ++..++++.+++.+. ......+||||||||++||||+.
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGL-----------LNRYPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHHHHHHHHh
Confidence 99998775 699999987632 122 234455555555433 34455789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
++|+++||||||++||+.+...+++ ++..+. .++|+|++||+++++.. ||+|++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELRE-ELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999888875 455443 37899999999998765 9999999999998765
No 387
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3e-36 Score=317.80 Aligned_cols=164 Identities=29% Similarity=0.373 Sum_probs=149.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
|+++|++++|+.+ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 4789999999643 45999999999999999999999999999999999999999999999873 57999
Q ss_pred EcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000755 1135 IPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLV 1214 (1300)
Q Consensus 1135 vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLl 1214 (1300)
+||++.++++|+++|+... ....||+|||||++||||++++|++++
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999998888999998642 235799999999999999999999999
Q ss_pred EeCCCcCCCHHHHHHHHHHHHHhcCCcEEEEEeCChhhhhccCEEEEEeCCE
Q 000755 1215 LDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGI 1266 (1300)
Q Consensus 1215 LDEpTs~lD~~t~~~i~~~l~~~~~~~Tvi~iaHrl~~i~~~D~v~vl~~G~ 1266 (1300)
|||||++||+.+.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999986 589999999998776799999998863
No 388
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.4e-36 Score=337.92 Aligned_cols=203 Identities=29% Similarity=0.436 Sum_probs=170.8
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCC-----ccEEEEcC-----------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI-----SGTLKLCG----------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~i~~~g----------- 680 (1300)
++++|++++|+ +.++++|+||+|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYG---EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEEC---CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 78999999996 246999999999999999999999999999999999999998 99999876
Q ss_pred ----eEEEEecCCcCCCCCHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 681 ----TKAYVAQSPWIQSGNIEDNILFGKP----MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 681 ----~~ayv~Q~~~l~~~Ti~eNI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
.++|++|+++++..|++||+.++.. .+. ++.+++++..++.++++ ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 2689999999988999999987532 121 23445555555543221 2345667899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
|++||||++.+|+++||||||++||+.+...+++ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEE-LIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999888865 56555556899999999998765 999999999999999999988
Q ss_pred Hhc
Q 000755 828 LNS 830 (1300)
Q Consensus 828 ~~~ 830 (1300)
...
T Consensus 231 ~~~ 233 (247)
T TIGR00972 231 FTN 233 (247)
T ss_pred HhC
Confidence 653
No 389
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-36 Score=334.69 Aligned_cols=201 Identities=27% Similarity=0.436 Sum_probs=171.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.++++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 488999999995 357999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCcCCCCCHHHHHhcCCCC---CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 000755 683 AYVAQSPWIQSGNIEDNILFGKPM---DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 759 (1300)
Q Consensus 683 ayv~Q~~~l~~~Ti~eNI~fg~~~---~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~ 759 (1300)
+|++|++.++..|++||+.++... ..++..+.++.+++..+. ......+||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHHhcC
Confidence 899999999989999999986432 234555666666664222 2345678999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 760 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 760 ~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
|+++||||||++||+.+...+++ ++.... .++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEE-LIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 99999999999999999888765 455443 37999999999999775 999999999999999999988754
No 390
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=352.37 Aligned_cols=200 Identities=36% Similarity=0.497 Sum_probs=170.1
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 684 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ay 684 (1300)
.++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 378999999996 256999999999999999999999999999999999999999999999873 699
Q ss_pred EecCCcCCC-CCHHHHHhcCCCC-------C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 685 VAQSPWIQS-GNIEDNILFGKPM-------D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 685 v~Q~~~l~~-~Ti~eNI~fg~~~-------~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
|+|++.++. .|++|||.|+... + +++..++++..++.+. ......+||||||||++|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHL-----------ADRYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHHH
Confidence 999999986 5999999997431 2 1244445555555432 234567899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
||||+.+|+++|||||||+||+.++..+.+ .+..+.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~-~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRR-WLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999988875 4444433 7899999999998665 99999999999999999999876
Q ss_pred c
Q 000755 830 S 830 (1300)
Q Consensus 830 ~ 830 (1300)
.
T Consensus 227 ~ 227 (353)
T PRK10851 227 E 227 (353)
T ss_pred C
Confidence 4
No 391
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-36 Score=337.90 Aligned_cols=205 Identities=27% Similarity=0.401 Sum_probs=171.6
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 680 (1300)
..++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 3699999999996 24699999999999999999999999999999999999987 589999876
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC----CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP----MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~----~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
.++|++|++.+++.|++|||.|+.. .+ +++..++++.+++...+. .....+..+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCCHHH
Confidence 2689999999999999999998642 12 223444555555532221 12345678999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||++||||++++|+++||||||++||+.+...+++ .+..+.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 234 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEE-LIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTD 234 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999988865 55555567899999999998765 9999999999999999999
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
++.+.
T Consensus 235 ~~~~~ 239 (254)
T PRK14273 235 ELFFN 239 (254)
T ss_pred HHHhC
Confidence 98754
No 392
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.7e-36 Score=336.38 Aligned_cols=191 Identities=23% Similarity=0.347 Sum_probs=159.5
Q ss_pred CcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEc-CCCCCCc-ccH
Q 000755 1069 PLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIP-QDPTMFE-GTV 1146 (1300)
Q Consensus 1069 ~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vp-Q~~~lf~-gTv 1146 (1300)
.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ....+++++|+| |++.++. .|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 3599999999999999999999999999999999999999999999999987543 345678899998 5566764 599
Q ss_pred HHhcCCCC---CCCHH----HHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 000755 1147 RNNLDPLE---EYKDE----EIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEAT 1219 (1300)
Q Consensus 1147 r~Nl~~~~---~~~d~----~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpT 1219 (1300)
++|+.... ....+ .+.++++.+++.+.. |+ ....||+|||||++|||||+.+|++|||||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~----~~~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-------DT----PVRQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------cC----ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99985321 22222 345566666664432 22 23579999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEec
Q 000755 1220 ASVDTATDNLIQQTLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGIIEEYD 1271 (1300)
Q Consensus 1220 s~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g 1271 (1300)
++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999998643 6899999999999877 9999999999998764
No 393
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.1e-36 Score=353.62 Aligned_cols=202 Identities=31% Similarity=0.453 Sum_probs=172.0
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCc--cEEEEcCe-----------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS--GTLKLCGT----------- 681 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~--G~i~~~g~----------- 681 (1300)
+.++++|++++|+ +.++|+|+||+|++||+++|+|||||||||||++|+|+.+|++ |+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 4699999999996 2469999999999999999999999999999999999999999 99999873
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
++||+|++.+|. .|++|||.|+.. .+. ++.+++++..+|.+.. .....+||||||||++||
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRvaLA 149 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAA-----------AHLPAQLSGGMQQRIAIA 149 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchh-----------hCChhhCCHHHHHHHHHH
Confidence 699999999985 599999998743 222 3455556665554433 445568999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C--CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R--SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~--~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|||..+|+++|||||||+||+.....+.+. +..+. + +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~-l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREE-IAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYD 228 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHH-HHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999988764 44332 2 6899999999998654 99999999999999999999976
Q ss_pred cC
Q 000755 830 SG 831 (1300)
Q Consensus 830 ~~ 831 (1300)
..
T Consensus 229 ~p 230 (362)
T TIGR03258 229 AP 230 (362)
T ss_pred Cc
Confidence 53
No 394
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.7e-36 Score=329.20 Aligned_cols=188 Identities=31% Similarity=0.520 Sum_probs=160.0
Q ss_pred EEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----------eEEEEec
Q 000755 618 EIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------TKAYVAQ 687 (1300)
Q Consensus 618 ~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------~~ayv~Q 687 (1300)
+++|++++|+.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q 78 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQ 78 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEec
Confidence 367899999621 5799999999999999999999999999999999999999999999987 3799999
Q ss_pred CC--cCCCCCHHHHHhcCCC---CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 000755 688 SP--WIQSGNIEDNILFGKP---MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADI 762 (1300)
Q Consensus 688 ~~--~l~~~Ti~eNI~fg~~---~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~i 762 (1300)
+| .++..|++||+.++.+ .++++..++++.+++.+..+ ....+||||||||++||||++.+|++
T Consensus 79 ~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 79 DVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKE-----------RHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcC-----------CCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 98 4678899999998643 23346677777777754433 33458999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEE
Q 000755 763 YLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKIT 819 (1300)
Q Consensus 763 llLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~ 819 (1300)
+||||||++||+.+.+.+.+ .+..+ .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGE-LIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999888865 45544 457899999999999875 9999999999974
No 395
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=342.44 Aligned_cols=198 Identities=30% Similarity=0.463 Sum_probs=169.0
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.++++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999962 35699999999999999999999999999999999999999999999987 26
Q ss_pred EEEecCC--cCCCCCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSP--WIQSGNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~--~l~~~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|++|+| .++..|+.||+.|+.. .+ +++++++++.+++.+..+. ....||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHHHHH
Confidence 9999998 5788899999998742 22 2355666777777544433 3458999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHH
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 827 (1300)
|||..+|+++||||||++||+.+...+.+ ++..+ .+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLME-ILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999988865 45444 34799999999999985 5999999999999999998654
No 396
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.9e-36 Score=335.74 Aligned_cols=197 Identities=34% Similarity=0.455 Sum_probs=165.4
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe---------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 681 (1300)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 678999999951 357999999999999999999999999999999999999999999998772
Q ss_pred -EEEEecCCcCCC-CCHHHHHhcCCCC---------------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCH
Q 000755 682 -KAYVAQSPWIQS-GNIEDNILFGKPM---------------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSG 744 (1300)
Q Consensus 682 -~ayv~Q~~~l~~-~Ti~eNI~fg~~~---------------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSG 744 (1300)
++|++|++.++. .|++||+.++... +.++..++++.+++.. .......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLAD-----------KAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHh-----------hhcCCcccCCH
Confidence 699999998875 6999999876321 1123344455554433 23456778999
Q ss_pred HHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEe
Q 000755 745 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQA 821 (1300)
Q Consensus 745 GQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~ 821 (1300)
|||||++||||++.+|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++.+. .||++++|++|++++.
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~ 227 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMD-YLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFD 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 99999999999999999999999999999999888865 455443 3789999999999985 4999999999999999
Q ss_pred cChHHH
Q 000755 822 GKYNDI 827 (1300)
Q Consensus 822 g~~~~l 827 (1300)
|+++++
T Consensus 228 ~~~~~~ 233 (243)
T TIGR02315 228 GAPSEL 233 (243)
T ss_pred CCHHHh
Confidence 998876
No 397
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-36 Score=332.58 Aligned_cols=196 Identities=21% Similarity=0.363 Sum_probs=164.6
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------eEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKAY 684 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~~ay 684 (1300)
|+++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 47899999996 25799999999999999999999999999999999999999999999987 3689
Q ss_pred EecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
++|++.++. .|++||+.++.. .+ +++.+++++.+++.+.. .....+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAA-----------DRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 999998776 599999987421 22 23455666666665433 233468999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
+.+|+++||||||++||+++.+.+.+ .+..+. + ++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWE-YIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999888865 444433 3 7899999999999875 999999999999998887653
No 398
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-36 Score=335.59 Aligned_cols=198 Identities=31% Similarity=0.445 Sum_probs=165.0
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 680 (1300)
++++|++++|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468999999962 25799999999999999999999999999999999999999999999876
Q ss_pred eEEEEecCCcCCC-CCHHHHHhcCCC------------CC---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCH
Q 000755 681 TKAYVAQSPWIQS-GNIEDNILFGKP------------MD---REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSG 744 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~-~Ti~eNI~fg~~------------~~---~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSG 744 (1300)
.++|++|++.++. .|++||+.++.. .. .++..++++..++. ......+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-----------DKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-----------hhhCCCcccCCH
Confidence 2689999998775 799999987532 11 12233334444332 234556789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEe
Q 000755 745 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQA 821 (1300)
Q Consensus 745 GQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~ 821 (1300)
|||||++||||++.+|+++||||||++||+.+...+++ .+..+. .++|+|++||+++.+. .||+|++|++|++++.
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~ 226 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMD-LLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFD 226 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEee
Confidence 99999999999999999999999999999999988875 454443 3789999999999988 5999999999999999
Q ss_pred cChHHHH
Q 000755 822 GKYNDIL 828 (1300)
Q Consensus 822 g~~~~l~ 828 (1300)
|+++++.
T Consensus 227 ~~~~~~~ 233 (241)
T cd03256 227 GPPAELT 233 (241)
T ss_pred cCHHHhh
Confidence 9988863
No 399
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=370.72 Aligned_cols=211 Identities=23% Similarity=0.340 Sum_probs=181.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CcceEEECCeecCCCCHHH-Hhc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP--TAGEIVIDGINISSIGLHD-LRS 1130 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p--~~G~I~idg~di~~i~~~~-lr~ 1130 (1300)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5899999999974 3599999999999999999999999999999999999996 8999999999998776554 457
Q ss_pred ccEEEcCCCCCCcc-cHHHhcCCCCC------CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1131 RLSIIPQDPTMFEG-TVRNNLDPLEE------YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1131 ~i~~vpQ~~~lf~g-Tvr~Nl~~~~~------~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
+++|+||++.+|.. |+++|+.+... .. .+++.++++.+++.+.. .....+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINP-----------ATPVGNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCc-----------ccchhhCCHHHHHH
Confidence 79999999988865 99999964311 12 13456677777764322 22346799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
++|||||+.+|+||||||||++||+.+...+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998864 46899999999999987 9999999999999999988764
No 400
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-36 Score=332.29 Aligned_cols=196 Identities=34% Similarity=0.467 Sum_probs=163.1
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------eEEEEec
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------TKAYVAQ 687 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~~ayv~Q 687 (1300)
++++|++++|+... .+++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46899999996311 14799999999999999999999999999999999999999999999987 3799999
Q ss_pred CCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 000755 688 SPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 759 (1300)
Q Consensus 688 ~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~ 759 (1300)
++.++. .|++||+.++.. .+ .++..+.++..++.+.+ .....+||||||||++||||++.+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFE-----------NAYPHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCcccCCHHHHHHHHHHHHHHcC
Confidence 998876 799999987532 11 23445556666654433 334468999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEe--CCeEEEecCh
Q 000755 760 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMK--DGKITQAGKY 824 (1300)
Q Consensus 760 ~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~--~G~i~~~g~~ 824 (1300)
|+++||||||++||+.+...+++ .+..+. .++|+|++||+++.+.. ||+|++|+ +|++++.++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQE-ELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 99999999999999999998875 444442 37899999999998764 99999999 7999988764
No 401
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-36 Score=371.77 Aligned_cols=212 Identities=22% Similarity=0.320 Sum_probs=181.9
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHH-hccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDL-RSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~l-r~~i 1132 (1300)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGPV--HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 58999999999753 59999999999999999999999999999999999999999999999999987776553 4579
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC-------CC---C----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE-------EY---K----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQR 1197 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~-------~~---~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqr 1197 (1300)
+|+||++.+|.. |+++|+.... .. . .+++.++++.+++.+.. + ....+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~----~~~~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDL-------D----EKVANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCc-------c----cchhhCCHHHH
Confidence 999999988875 9999986421 10 1 13456677777764322 2 23357999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhh
Q 000755 1198 QLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTK 1275 (1300)
Q Consensus 1198 Qrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~ 1275 (1300)
||++|||||+.+|++|||||||++||+.+...+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998864 36899999999999987 99999999999999999988
Q ss_pred HHh
Q 000755 1276 LLE 1278 (1300)
Q Consensus 1276 l~~ 1278 (1300)
+..
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 753
No 402
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.4e-36 Score=370.09 Aligned_cols=211 Identities=22% Similarity=0.301 Sum_probs=180.2
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHH-Hhccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHD-LRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~-lr~~i 1132 (1300)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999975 35999999999999999999999999999999999999999999999999987655444 35679
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC-------CCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE-------EYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLV 1200 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~-------~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl 1200 (1300)
+|+||++.+|.. |+++|+.+.. .... +++.++++++++.+.. + ....+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-------D----KLVGELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCc-------c----CchhhCCHHHHHHH
Confidence 999999988865 9999996421 1111 2455677777764432 2 23357999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1201 CLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1201 ~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
+|||||+.+|++|||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 99999999999999999999999999999999998864 36899999999999987 9999999999999999988764
No 403
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=5.9e-36 Score=325.56 Aligned_cols=194 Identities=24% Similarity=0.331 Sum_probs=168.3
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++. .+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.... ..+|++++|
T Consensus 1 l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDGR--ALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCCc--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 4789999999753 5899999999999999999999999999999999999999999999999986543 467889999
Q ss_pred EcCCCCCC-cccHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000755 1135 IPQDPTMF-EGTVRNNLDPLE-EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKV 1212 (1300)
Q Consensus 1135 vpQ~~~lf-~gTvr~Nl~~~~-~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~i 1212 (1300)
+||++.++ ..|+++|+.... ...++++.++++.+++.+...+ ...+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFEDR-----------PVAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhcC-----------chhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 469999986542 3356678889999988654322 2357999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEE
Q 000755 1213 LVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLL 1262 (1300)
Q Consensus 1213 LlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl 1262 (1300)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+...+.. ||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998764 47899999999887766 9999887
No 404
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.6e-36 Score=330.93 Aligned_cols=198 Identities=25% Similarity=0.451 Sum_probs=167.1
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------EEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 684 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------~ay 684 (1300)
++++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4689999999632 257999999999999999999999999999999999999999999999873 689
Q ss_pred EecCCcCC-CCCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWIQ-SGNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l~-~~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
++|++.++ +.|++||+.++.. .. .++++++++.+++.+.. .....+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHHHHH
Confidence 99999887 6799999987421 22 23455666666664332 334568999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
+.+|+++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWD-LILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999888865 55555567999999999999865 999999999999999988764
No 405
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=6e-36 Score=327.22 Aligned_cols=191 Identities=26% Similarity=0.390 Sum_probs=163.8
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 685 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ayv 685 (1300)
++++|++++|+ +.++|+|+||++++|++++|+|+||||||||+++|+|..+|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 46899999995 357999999999999999999999999999999999999999999999873 7899
Q ss_pred ecCCcCC-CCCHHHHHhcCCC---CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 000755 686 AQSPWIQ-SGNIEDNILFGKP---MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDAD 761 (1300)
Q Consensus 686 ~Q~~~l~-~~Ti~eNI~fg~~---~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ 761 (1300)
+|++.++ +.|++||+.++.. .++++.+++++..++.+.+ ......||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999876 5799999987532 3455666777777665433 34457899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 762 IYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 762 illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
++||||||++||+.+.+.+.+ .+.... +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRE-LILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999888875 444433 57999999999999875 9999999999998764
No 406
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.9e-36 Score=333.73 Aligned_cols=190 Identities=26% Similarity=0.406 Sum_probs=162.8
Q ss_pred eeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCCc-ccHHHhc
Q 000755 1072 LRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFE-GTVRNNL 1150 (1300)
Q Consensus 1072 L~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf~-gTvr~Nl 1150 (1300)
|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. +.+|+||++.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876443 2489999999887 5999998
Q ss_pred CCC-----CCCCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcC
Q 000755 1151 DPL-----EEYKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATAS 1221 (1300)
Q Consensus 1151 ~~~-----~~~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~ 1221 (1300)
... ....+ +.+.++++.+++.+...+ ....||||||||++|||||+.+|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADK-----------RPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcC-----------ChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 542 12222 235667888877554332 3457899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1222 VDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1222 lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998864 26899999999999887 9999999999999999876663
No 407
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.8e-36 Score=331.16 Aligned_cols=190 Identities=33% Similarity=0.459 Sum_probs=158.1
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 680 (1300)
++++|++++|+... .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996321 15799999999999999999999999999999999999999999998875
Q ss_pred --eEEEEecCCcCCCC-CHHHHHhcCCCC---C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 681 --TKAYVAQSPWIQSG-NIEDNILFGKPM---D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 681 --~~ayv~Q~~~l~~~-Ti~eNI~fg~~~---~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
.++|++|++.++.. |++||+.++... + ++++.++++..++.+ .......+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGD-----------RLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCch-----------hhhcChhhcCHHHHHHH
Confidence 37999999988875 999999986431 1 223444555554433 33455678999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeE
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKI 818 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i 818 (1300)
+||||++.+|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVME-LLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999888865 555543 37899999999998878999999999974
No 408
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=5.2e-36 Score=336.59 Aligned_cols=210 Identities=21% Similarity=0.260 Sum_probs=168.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCcceEEECCeecCCCCHHHHh-cc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIV--EPTAGEIVIDGINISSIGLHDLR-SR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~--~p~~G~I~idg~di~~i~~~~lr-~~ 1131 (1300)
|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVEDK--AILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 7899999999753 5999999999999999999999999999999999995 69999999999998877766554 56
Q ss_pred cEEEcCCCCCCcc-cHHHhcC-------CCCC---CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCC-CCCChh
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLD-------PLEE---YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENG-ENWSMG 1195 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~-------~~~~---~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G-~~LSgG 1195 (1300)
++|++|++.++.. |..+++. .... .. ++.+.+.++..++.+ ++.+ ... .+||||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~---~~~~~~LS~G 149 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPE-------DLLT---RSVNVGFSGG 149 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCCh-------hhcc---cCCCCCCCHH
Confidence 9999999987654 4444332 1110 01 112233444444421 1111 112 369999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc--cCEEEEEeCCEEEEecC
Q 000755 1196 QRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID--SDMVLLLSHGIIEEYDS 1272 (1300)
Q Consensus 1196 qrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~--~D~v~vl~~G~i~e~g~ 1272 (1300)
||||++||||++++|+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+
T Consensus 150 ~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~ 229 (248)
T PRK09580 150 EKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGD 229 (248)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCC
Confidence 99999999999999999999999999999999999999987654 6899999999999987 79999999999999999
Q ss_pred hhhH
Q 000755 1273 PTKL 1276 (1300)
Q Consensus 1273 ~~~l 1276 (1300)
++..
T Consensus 230 ~~~~ 233 (248)
T PRK09580 230 FTLV 233 (248)
T ss_pred HHHH
Confidence 8754
No 409
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-36 Score=350.76 Aligned_cols=202 Identities=25% Similarity=0.390 Sum_probs=169.0
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 680 (1300)
|+++|++++|+... +.++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999996322 35799999999999999999999999999999999999999999999886
Q ss_pred -eEEEEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 681 -TKAYVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 681 -~~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
.++|++|++.++. .|++||+.++.. .+. ++..+.++..++.+ .......+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSD-----------KADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHHHHHHH
Confidence 2799999999875 799999988632 222 23334444444432 234556789999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
|||||+++|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~-~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILE-LLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999988875 454443 37899999999999875 9999999999999999999886
Q ss_pred hc
Q 000755 829 NS 830 (1300)
Q Consensus 829 ~~ 830 (1300)
..
T Consensus 230 ~~ 231 (343)
T PRK11153 230 SH 231 (343)
T ss_pred hC
Confidence 54
No 410
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=338.87 Aligned_cols=202 Identities=30% Similarity=0.471 Sum_probs=172.6
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.++++|++++|+. ..+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 5899999999963 2357999999999999999999999999999999999999999999999883 6
Q ss_pred EEEecCC--cCCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSP--WIQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|++|+| .+++.|+.|||.++.. .++ ++..++++.++|...++. ...+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNR-----------EPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHHHHH
Confidence 8999998 4667899999998632 222 345666677777655443 3458999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||++.+|+++||||||++||+.+...+++ ++..+.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLE-TVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999988875 4555443 7899999999999888999999999999999999887654
No 411
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1e-35 Score=331.71 Aligned_cols=199 Identities=24% Similarity=0.425 Sum_probs=168.0
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------EEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 684 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------~ay 684 (1300)
++++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 67899999996 357999999999999999999999999999999999999999999998873 689
Q ss_pred EecCCcC-CCCCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWI-QSGNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l-~~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
++|++.+ +..|++||+.++.. ...+ +..+.++.. |.....+....+||||||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARL-----------GLAERADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CChhhhcCChhhCCHHHHHHHHHHHHH
Confidence 9999987 56899999987532 2222 222333333 333345667789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
+.+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVA-HVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999988875 455443 47899999999999888999999999999999999888754
No 412
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.1e-35 Score=312.69 Aligned_cols=159 Identities=29% Similarity=0.510 Sum_probs=147.7
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH-HHhcccE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH-DLRSRLS 1133 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~-~lr~~i~ 1133 (1300)
|+++|++++|++. ++++++||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 4789999999753 599999999999999999999999999999999999999999999999999877654 4577899
Q ss_pred EEcCCCCCCcccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000755 1134 IIPQDPTMFEGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVL 1213 (1300)
Q Consensus 1134 ~vpQ~~~lf~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iL 1213 (1300)
|+|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 7999999999999999999999
Q ss_pred EEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1214 VLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1214 lLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
+|||||++||+.+.+.+.+.|++.. ++.|+|++||+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999864 47899999999998877 99999999999975
No 413
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.6e-36 Score=329.59 Aligned_cols=198 Identities=27% Similarity=0.449 Sum_probs=163.9
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------eE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------TK 682 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~~ 682 (1300)
|+++|++++|+ +.++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 46899999996 24799999999999999999999999999999999999999999999876 26
Q ss_pred EEEecCCcCCCC-CHHHHHhcCCCCC--H---HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 683 AYVAQSPWIQSG-NIEDNILFGKPMD--R---EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 683 ayv~Q~~~l~~~-Ti~eNI~fg~~~~--~---~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
+|++|++.++.. |++||+.++.... . ++..++++... +.......+..+||||||||++||||+
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP----------RLKERRKQLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH----------hhhhhhhCchhhCCHHHHHHHHHHHHH
Confidence 999999988875 9999999875421 1 12222232221 112234566788999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
..+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFE-AIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999888875 454443 57899999999998765 9999999999999999887764
No 414
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=335.84 Aligned_cols=205 Identities=29% Similarity=0.435 Sum_probs=172.6
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 680 (1300)
..++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 4689999999996 2479999999999999999999999999999999999986 5899998876
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP----MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
.++|++|++.++..|++||+.++.. .+. ++.+++++..++..++. ..+++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHHH
Confidence 2689999999988999999987632 222 34455566665543332 23466788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||++||||++.+|+++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.+.. ||+|++|++|++++.|+.+
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEE-LITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888765 55555567899999999998865 9999999999999999999
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 88653
No 415
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-36 Score=331.25 Aligned_cols=196 Identities=25% Similarity=0.366 Sum_probs=163.7
Q ss_pred eEEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------
Q 000755 616 AIEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 680 (1300)
.++++|++|+|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999996322 14799999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEecCCcCCCC-CHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 ---TKAYVAQSPWIQSG-NIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 ---~~ayv~Q~~~l~~~-Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++|++|++.++.. |++||+.++.. .+. ++..++++.+++. ........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLE-----------HRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHHHHH
Confidence 27899999988764 99999987421 222 2344555555443 23345667899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKITQAGK 823 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~ 823 (1300)
++||||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQ-LLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999888865 455442 4799999999999998889999999999998765
No 416
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=337.65 Aligned_cols=199 Identities=30% Similarity=0.485 Sum_probs=168.4
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------E
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 682 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------~ 682 (1300)
++++|++++|+. +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 688999999952 356999999999999999999999999999999999999999999998862 6
Q ss_pred EEEecCCc--CCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSPW--IQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|++|+|. +++.|+.|||.|+.. .+. ++.+++++.+++... .......||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKY-----------RHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCCcccCCHHHHHHHHHH
Confidence 89999986 567899999998642 222 334455555555433 3445678999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
||++.+|+++||||||++||+.+...+++. +..+ .+++|+|++||+++.+..||+|++|++|++++.|+.+++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999998888754 4443 34899999999999998899999999999999999988764
No 417
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9e-36 Score=331.29 Aligned_cols=198 Identities=26% Similarity=0.405 Sum_probs=165.1
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------E
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 682 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------~ 682 (1300)
++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 46899999996 346999999999999999999999999999999999999999999998762 6
Q ss_pred EEEecCCcCCCC-CHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 683 AYVAQSPWIQSG-NIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 683 ayv~Q~~~l~~~-Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
+|++|++.++.. |++||+.++.+ ...+ +.++.++..+ ..........+||||||||++|||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~la~ 146 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFH-----------ITHLRKSKASSLSGGERRRVEIAR 146 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHHHHHH
Confidence 899999988875 99999987532 1211 2223333333 333445667899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|+..+|+++||||||++||+.+.+.+.+ .+.... .++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 147 al~~~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 147 ALATNPKFLLLDEPFAGVDPIAVQDIQK-IIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999888865 444443 47899999999987665 99999999999999999888754
No 418
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.1e-36 Score=327.85 Aligned_cols=188 Identities=34% Similarity=0.540 Sum_probs=157.7
Q ss_pred EEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------EEEEecCCc
Q 000755 619 IVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQSPW 690 (1300)
Q Consensus 619 i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------~ayv~Q~~~ 690 (1300)
++|++++|+. .++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|++|++.
T Consensus 2 ~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 2 VEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred cccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 6789999962 46999999999999999999999999999999999999999999999883 799999987
Q ss_pred C---CCCCHHHHHhcCCCC-----------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 691 I---QSGNIEDNILFGKPM-----------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 691 l---~~~Ti~eNI~fg~~~-----------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
+ ++.|++||+.++... .+++.+++++.+++.+.++ ....+||||||||++||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~al 147 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLARAL 147 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHHHHH
Confidence 6 558999999876431 1234566667666654432 34568999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
..+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++++.. ||+|++|++| +++.|
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 148 VQDPDLLLLDEPFAGVDPKTQEDIYE-LLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999888865 444443 67899999999999865 9999999886 55543
No 419
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.3e-36 Score=301.07 Aligned_cols=197 Identities=26% Similarity=0.408 Sum_probs=174.0
Q ss_pred eeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEEEcCCCCCC
Q 000755 1063 RYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMF 1142 (1300)
Q Consensus 1063 ~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~vpQ~~~lf 1142 (1300)
.|.....++|+++||++++||.++|+||||||||||+++++-+..|++|++++.|.|++..+++.+|++++|+.|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 45544567999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHhcCCC-----CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000755 1143 EGTVRNNLDPL-----EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1217 (1300)
Q Consensus 1143 ~gTvr~Nl~~~-----~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~iLlLDE 1217 (1300)
.+||.+|+-+- ...+.....+.|+++++.+.+ +..+..+||||||||++|+|-|---|+||+|||
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~----------L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE 159 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSI----------LTKNITELSGGEKQRIALIRNLQFMPKILLLDE 159 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCchhh----------hcchhhhccchHHHHHHHHHHhhcCCceEEecC
Confidence 99999998532 233444566778888876654 334557899999999999999999999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHhcC--CcEEEEEeCChhh-hhccCEEEEEeCCEEEE
Q 000755 1218 ATASVDTATDNLIQQTLRQHFS--DCTVITIAHRITS-VIDSDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1218 pTs~lD~~t~~~i~~~l~~~~~--~~Tvi~iaHrl~~-i~~~D~v~vl~~G~i~e 1269 (1300)
|||+||+.+.+.|.+.|.++++ +.+++.|||+-+. +..+|+++-+..|++-+
T Consensus 160 ~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 160 ITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred chhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999999999873 5899999999998 55699999999997643
No 420
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-35 Score=331.16 Aligned_cols=201 Identities=28% Similarity=0.439 Sum_probs=166.5
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
|+++|++++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68899999996321 127999999999999999999999999999999999999999999998762
Q ss_pred --EEEEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 682 --KAYVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 682 --~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
++|++|++.++. .|++||+.++.. .+. ++..+.++..++.+ .......+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLED-----------KADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhcChhhCCHHHHHHHH
Confidence 689999999886 699999987532 222 23344444444432 234456789999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
||||+..+|+++||||||++||+.+...+++ ++..+. + ++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILA-LLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999888865 454443 3 7899999999999765 9999999999999999988775
Q ss_pred h
Q 000755 829 N 829 (1300)
Q Consensus 829 ~ 829 (1300)
+
T Consensus 230 ~ 230 (233)
T cd03258 230 A 230 (233)
T ss_pred c
Confidence 4
No 421
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=336.77 Aligned_cols=207 Identities=25% Similarity=0.404 Sum_probs=173.7
Q ss_pred CcceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC-------
Q 000755 613 SETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG------- 680 (1300)
Q Consensus 613 ~~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g------- 680 (1300)
.+..|+++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 16 ~~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 345799999999996 25799999999999999999999999999999999999975 899999876
Q ss_pred --------eEEEEecCCcCCCCCHHHHHhcCCC---C--C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCC
Q 000755 681 --------TKAYVAQSPWIQSGNIEDNILFGKP---M--D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLS 743 (1300)
Q Consensus 681 --------~~ayv~Q~~~l~~~Ti~eNI~fg~~---~--~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LS 743 (1300)
.++|++|+|.++..|+.||+.|+.. . . .++.+++++.+++.+++. +..+..+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 2689999999998899999987531 1 1 233455666666644322 23356678999
Q ss_pred HHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 744 GGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 744 GGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
||||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g 244 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEE-LIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVG 244 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888764 56655557899999999999865 9999999999999999
Q ss_pred ChHHHHhc
Q 000755 823 KYNDILNS 830 (1300)
Q Consensus 823 ~~~~l~~~ 830 (1300)
+.+++...
T Consensus 245 ~~~~~~~~ 252 (267)
T PRK14235 245 DTEKMFTN 252 (267)
T ss_pred CHHHHHhC
Confidence 99888643
No 422
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.4e-36 Score=327.65 Aligned_cols=191 Identities=31% Similarity=0.452 Sum_probs=159.9
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-----------eEEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------TKAYV 685 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~~ayv 685 (1300)
|+++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 468999999962 4799999999999999999999999999999999999999999999977 27999
Q ss_pred ecCCcCCC-CCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 686 AQSPWIQS-GNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 686 ~Q~~~l~~-~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
+|++.++. .|++||+.++.. ...+ +..++++..++.+. ......+||||||||++||||++
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHHHh
Confidence 99999875 699999987632 2222 33344454444432 34556789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
.+|++++|||||++||+++...+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRA-ELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999888875 454443 37899999999998775 9999999999998765
No 423
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=333.46 Aligned_cols=196 Identities=30% Similarity=0.383 Sum_probs=166.9
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------eEEEEe
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------TKAYVA 686 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~~ayv~ 686 (1300)
..|+++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++| .++|++
T Consensus 11 ~~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 3599999999996 35799999999999999999999999999999999999999999999877 379999
Q ss_pred cCCcCCC-CCHHHHHhcCCCC-CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEE
Q 000755 687 QSPWIQS-GNIEDNILFGKPM-DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYL 764 (1300)
Q Consensus 687 Q~~~l~~-~Ti~eNI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ill 764 (1300)
|++.++. .|++||+.++... .+++..++++..++... ......+||||||||++||||++.+|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9998876 6999999986421 23455566666655432 345567899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 765 FDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 765 LDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||||++||+.+...+.+ .+..+. .++|+|++||+++++.. ||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQD-LIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999888865 454442 37899999999998764 9999999999999888754
No 424
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=4.2e-34 Score=377.85 Aligned_cols=94 Identities=12% Similarity=0.187 Sum_probs=84.8
Q ss_pred cccCCCCCChhHHHHHHHHHHHccC--CCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEE
Q 000755 1185 VTENGENWSMGQRQLVCLGRVLLKK--SKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLL 1261 (1300)
Q Consensus 1185 v~e~G~~LSgGqrQrl~LARall~~--~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~v 1261 (1300)
++.....|||||-||+-||+.|-.+ -=++||||||.||-+.....+.++|++.. .|.|||+|-|+.+++..||+|+-
T Consensus 1381 L~R~~~TLSGGE~QRirLa~~lgs~L~gvlYVLDEPSiGLHp~D~~~Li~~L~~Lrd~GNTvivVEHd~~~i~~AD~iid 1460 (1809)
T PRK00635 1381 LGQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLSGLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEHADHLIH 1460 (1809)
T ss_pred ccCCCCCCcchHHHHHHHHHHhcCCCceeEEEeCCCCcCCChhHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEE
Confidence 4567789999999999999999775 45779999999999999999999999876 48999999999999999999999
Q ss_pred E------eCCEEEEecChhhHHh
Q 000755 1262 L------SHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1262 l------~~G~i~e~g~~~~l~~ 1278 (1300)
| ..|+|+.+|+|+++..
T Consensus 1461 iGPgAG~~GG~iv~~G~~~~l~~ 1483 (1809)
T PRK00635 1461 LGPGSGPQGGYLLSTSALKQSQP 1483 (1809)
T ss_pred eCCCccCCCCEEEecCCHHHHhh
Confidence 9 4689999999999975
No 425
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=350.61 Aligned_cols=203 Identities=28% Similarity=0.408 Sum_probs=170.9
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EE
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 683 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~a 683 (1300)
..++++|++++|+ +.++|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4699999999996 246999999999999999999999999999999999999999999999884 69
Q ss_pred EEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHH
Q 000755 684 YVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 755 (1300)
Q Consensus 684 yv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARA 755 (1300)
||+|++-+|. .|+.|||.|+.. .+. ++..++++..++... ......+|||||||||+||||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEF-----------AKRKPHQLSGGQRQRVALARS 163 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHH
Confidence 9999999986 599999998743 222 234455555555432 234556899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000755 756 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNSG 831 (1300)
Q Consensus 756 ly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 831 (1300)
|+.+|+++|||||||+||+.++..+.+.+..-.. .+.|+|+|||+.+.+. .||+|++|++|++++.|+++++....
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999888654332222 3789999999999865 59999999999999999999987653
No 426
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1e-35 Score=327.64 Aligned_cols=194 Identities=19% Similarity=0.325 Sum_probs=160.9
Q ss_pred EEEEeEEEEecCCCC-CCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------eEE
Q 000755 617 IEIVDGNFAWDISSN-NPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~~a 683 (1300)
++++|++++|+.... .++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 678999999963211 2699999999999999999999999999999999999999999999987 369
Q ss_pred EEecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHH
Q 000755 684 YVAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 755 (1300)
Q Consensus 684 yv~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARA 755 (1300)
|++|++.++. .|++||+.+... .+ .++..++++..++.+ .......+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEE-----------LLDRRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HHhhhhhhcCHHHHHHHHHHHH
Confidence 9999998887 499999976422 12 233444555555433 3345677899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 756 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 756 ly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
++.+|+++||||||++||+.+.+.+.+ .+..+ .+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALRE-FIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999888865 45444 347899999999998765 9999999999998654
No 427
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=339.26 Aligned_cols=203 Identities=26% Similarity=0.440 Sum_probs=168.8
Q ss_pred eEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------
Q 000755 616 AIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 681 (1300)
.|+++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 247999999999999999999999999999999999999999999998773
Q ss_pred -----EEEEecCC--cCCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 -----KAYVAQSP--WIQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 -----~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
++|++|+| .++..|+.|||.|+.. .+. ++.+++++.+++..+ .......+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSED----------LISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhhCCcccCCHHHH
Confidence 58999998 5677899999987532 222 233445555555322 12455678999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 825 (1300)
||++||||+..+|+++||||||++||+.+...+.+ ++..+. ++.|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~-~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQ-LFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888765 555543 4789999999999876 49999999999999999998
Q ss_pred HHHh
Q 000755 826 DILN 829 (1300)
Q Consensus 826 ~l~~ 829 (1300)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 8764
No 428
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=338.83 Aligned_cols=201 Identities=25% Similarity=0.458 Sum_probs=171.6
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
.|+++|++|+|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 5899999999952 357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCC--cCCCCCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 682 -KAYVAQSP--WIQSGNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 682 -~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
++|++|+| .+++.|++||+.++.. +. .++.+++++.+++... ......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHHHHH
Confidence 58999998 5678999999987532 22 2345556666666432 34567899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHH
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
|||||+.+|+++||||||++||+.+...+.+ ++..+.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMK-LLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999888865 4554433 789999999999987 59999999999999999999886
Q ss_pred hc
Q 000755 829 NS 830 (1300)
Q Consensus 829 ~~ 830 (1300)
..
T Consensus 231 ~~ 232 (283)
T PRK13636 231 AE 232 (283)
T ss_pred cC
Confidence 53
No 429
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=334.34 Aligned_cols=204 Identities=25% Similarity=0.414 Sum_probs=170.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc--C---CccEEEEcCe---------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP--K---ISGTLKLCGT--------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~--~---~~G~i~~~g~--------- 681 (1300)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|.
T Consensus 12 ~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 589999999996 2479999999999999999999999999999999999987 3 6899988762
Q ss_pred ------EEEEecCCcCCCCCHHHHHhcCCCC----CHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 ------KAYVAQSPWIQSGNIEDNILFGKPM----DRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 ------~ayv~Q~~~l~~~Ti~eNI~fg~~~----~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
++|++|++.++..|++||+.|+... +++ +..++++..++.+.+. ...+..+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 6899999999989999999876421 222 2333444444433221 234567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++++|+++||||||++||+++...+. +++..+.+++|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 240 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIE-ELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNK 240 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999988775 466665567899999999998765 99999999999999999999
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 241 ~~~~ 244 (259)
T PRK14274 241 MFSN 244 (259)
T ss_pred HhhC
Confidence 8654
No 430
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-35 Score=341.89 Aligned_cols=201 Identities=25% Similarity=0.421 Sum_probs=168.8
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------eE
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TK 682 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~~ 682 (1300)
..++++|++++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 3699999999996 35799999999999999999999999999999999999999999999987 37
Q ss_pred EEEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 683 AYVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 683 ayv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
|||||++.++. .|++||+.|... .+. ++.+++++.+++... ......+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-----------ADAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-----------hcCchhhCCHHHHHHHHHHH
Confidence 99999998874 799999985321 122 233344554444322 23344589999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||.++|++++|||||++||+.++..+++ .+..+. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999998875 455543 47999999999999876 999999999999999999998654
No 431
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.2e-35 Score=365.46 Aligned_cols=211 Identities=18% Similarity=0.199 Sum_probs=183.1
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.|+++|++++|+.. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+..++++.++
T Consensus 3 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 48999999999753 4999999999999999999999999999999999999999999999998887777777788899
Q ss_pred EEcCCCCC--C-------cccHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1134 IIPQDPTM--F-------EGTVRNNLDPLEEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1134 ~vpQ~~~l--f-------~gTvr~Nl~~~~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
++||++.+ + ..|+++|+... ...++++.++++.+++.+.... ....||||||||++|||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~ 148 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDE-VKDPARCEQLAQQFGITALLDR-----------RFKYLSTGETRKTLLCQ 148 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccc-hhHHHHHHHHHHHcCCHhhhhC-----------CcccCCHHHHHHHHHHH
Confidence 99998753 2 34889887542 1224567788888888654333 23568999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHHh
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLLE 1278 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~~ 1278 (1300)
||+.+|++|||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.+ ||+|++|++|+++..|+++++.+
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999988643 6899999999999988 99999999999999999998875
No 432
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.4e-35 Score=323.44 Aligned_cols=194 Identities=26% Similarity=0.363 Sum_probs=167.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.... ...+++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999975 35999999999999999999999999999999999999999999999999987654 456778999
Q ss_pred EcCCCCCCc-ccHHHhcCCCC----CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccC
Q 000755 1135 IPQDPTMFE-GTVRNNLDPLE----EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKK 1209 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~~----~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~ 1209 (1300)
++|++.++. .|+++|+.... ...++++.++++.+++.+...+ ....||||||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFEDV-----------PVRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhC-----------ChhhcCHHHHHHHHHHHHHhcC
Confidence 999998876 49999985421 1344567889999998654332 2357999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEE
Q 000755 1210 SKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLL 1262 (1300)
Q Consensus 1210 ~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl 1262 (1300)
|++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999998864 46899999999999977 4677776
No 433
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-36 Score=338.76 Aligned_cols=198 Identities=32% Similarity=0.427 Sum_probs=165.1
Q ss_pred EEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-----------------
Q 000755 618 EIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------------- 680 (1300)
Q Consensus 618 ~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------------- 680 (1300)
.++|++++|. +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 3456666664 35689999999999999999999999999999999999999999999876
Q ss_pred eEEEEecCCcCC-CCCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 681 TKAYVAQSPWIQ-SGNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 681 ~~ayv~Q~~~l~-~~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
.++|++|++.++ +.|++||+.++.. .+ ++++.++++.+++.+.+. ....+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEH-----------KYPDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CCcccCCHHHHHHHHH
Confidence 379999999988 5699999987532 11 234556666666654443 3445899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|||++.+|+++||||||++||+.+.+.+.+ ++..+. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQD-ELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999888875 454442 37999999999998764 99999999999999999999875
Q ss_pred c
Q 000755 830 S 830 (1300)
Q Consensus 830 ~ 830 (1300)
.
T Consensus 251 ~ 251 (269)
T cd03294 251 N 251 (269)
T ss_pred C
Confidence 4
No 434
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=333.36 Aligned_cols=204 Identities=26% Similarity=0.424 Sum_probs=169.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccc--cC---CccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV--PK---ISGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~--~~---~~G~i~~~g---------- 680 (1300)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 589999999996 257999999999999999999999999999999999985 36 589999876
Q ss_pred -----eEEEEecCCcCCCCCHHHHHhcCCC---C-CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 -----TKAYVAQSPWIQSGNIEDNILFGKP---M-DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 -----~~ayv~Q~~~l~~~Ti~eNI~fg~~---~-~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++.+++.|++||+.++.. . +. ++..++++.+++...+. +..+....+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 2689999999999999999987531 1 11 22334455555433222 234667789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++.+|+++||||||++||+.+...+++ .+....+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEE-TLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHH-HHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999988875 55555557899999999998764 99999999999999999999
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+.+.
T Consensus 234 ~~~~ 237 (252)
T PRK14239 234 MFMN 237 (252)
T ss_pred HHhC
Confidence 8754
No 435
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=333.31 Aligned_cols=204 Identities=26% Similarity=0.420 Sum_probs=170.8
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcc---ccC--CccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGE---VPK--ISGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~---~~~--~~G~i~~~g---------- 680 (1300)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|. ++| ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 589999999996 25699999999999999999999999999999999996 454 589998876
Q ss_pred -----eEEEEecCCcCCCCCHHHHHhcCCC----CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 -----TKAYVAQSPWIQSGNIEDNILFGKP----MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 -----~~ayv~Q~~~l~~~Ti~eNI~fg~~----~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++.++..|+.||+.++.. .+ +++.+++++.+++.++++ +..++.+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 2699999999998999999987532 11 223455566665543332 234567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEE-LIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999888865 55555567999999999998754 99999999999999999999
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+.+.
T Consensus 232 ~~~~ 235 (250)
T PRK14245 232 IFTN 235 (250)
T ss_pred HhcC
Confidence 8754
No 436
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.8e-35 Score=315.62 Aligned_cols=166 Identities=32% Similarity=0.605 Sum_probs=150.9
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------EEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 684 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------~ay 684 (1300)
|+++|++++|+.. ..++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4689999999632 247999999999999999999999999999999999999999999999873 699
Q ss_pred EecCCcCCCCCHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEE
Q 000755 685 VAQSPWIQSGNIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYL 764 (1300)
Q Consensus 685 v~Q~~~l~~~Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~ill 764 (1300)
++|++++++.|++||| ..+||||||||++||||++++|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 46899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEec
Q 000755 765 FDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAG 822 (1300)
Q Consensus 765 LDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g 822 (1300)
|||||++||+++.+.+++ .+..+.+++|+|++||++++++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLS-LIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999888875 455555689999999999999889999999999998754
No 437
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=338.11 Aligned_cols=203 Identities=25% Similarity=0.446 Sum_probs=167.4
Q ss_pred eEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------
Q 000755 616 AIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 681 (1300)
.++++|++++|+... ..++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999996321 146999999999999999999999999999999999999999999998772
Q ss_pred -----EEEEecCC--cCCCCCHHHHHhcCCC---CCHHH----HHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 -----KAYVAQSP--WIQSGNIEDNILFGKP---MDREK----YDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 -----~ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~~~----~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
++|++|+| .+++.|++|||.|+.. .+.++ .+++++..++.. ........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~ 151 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQM 151 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHH
Confidence 68999998 5778899999987532 22222 233344444421 123456778999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
||++||||++.+|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMT-LFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888865 444443 47899999999998865 9999999999999999998
Q ss_pred HHHh
Q 000755 826 DILN 829 (1300)
Q Consensus 826 ~l~~ 829 (1300)
++..
T Consensus 231 ~~~~ 234 (280)
T PRK13649 231 DIFQ 234 (280)
T ss_pred HHhc
Confidence 8765
No 438
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=334.34 Aligned_cols=205 Identities=26% Similarity=0.378 Sum_probs=174.0
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 680 (1300)
..|+++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 4699999999995 3679999999999999999999999999999999999996 5899998876
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC----CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP----MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~----~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
.++|++|++.++..|++|||.++.. .+ +++..++++.+++.+++. +..+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 2699999999998999999988632 12 233455566666654332 23567788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||++||||++++|+++||||||++||+.+...+.+ ++..+.++.|+|++||+++.+.. ||+|++|++|++++.|+.+
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEE-TMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888865 55555567899999999998764 9999999999999999999
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 98653
No 439
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.3e-35 Score=329.73 Aligned_cols=199 Identities=30% Similarity=0.460 Sum_probs=167.0
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------e
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------T 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------~ 681 (1300)
++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 67899999996 25799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC----CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP----MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~----~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
++|++|++.++. .|++||+.++.. .+.+ +..++++..++. .....+...||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLA-----------ERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------HHHhcChhhcCHHHHHHHHH
Confidence 699999998875 699999988631 2222 233344443333 33345667899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
|||++.+|++++|||||++||+++...+.+ ++..+. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLK-VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999888865 555443 47999999999999865 999999999999999999988653
No 440
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.3e-35 Score=364.66 Aligned_cols=220 Identities=24% Similarity=0.396 Sum_probs=182.4
Q ss_pred eEEEEeeeeeeCCC--CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CcceEEECCeecCCCCHH
Q 000755 1054 EVDILNLQVRYAPH--LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP-----TAGEIVIDGINISSIGLH 1126 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~--~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p-----~~G~I~idg~di~~i~~~ 1126 (1300)
.++++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999632 23699999999999999999999999999999999999987 799999999999876654
Q ss_pred H---Hh-cccEEEcCCCC--CCc-ccHHHhcCC----CCCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCC
Q 000755 1127 D---LR-SRLSIIPQDPT--MFE-GTVRNNLDP----LEEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGEN 1191 (1300)
Q Consensus 1127 ~---lr-~~i~~vpQ~~~--lf~-gTvr~Nl~~----~~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~ 1191 (1300)
+ .| ++++|+||++. ++. .|+++|+.. ....+ .+++.++++.+++.+.... ......+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~--------~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKR--------LTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhhCCcc
Confidence 3 33 57999999985 444 488888742 11122 2456778888888542110 1223457
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCcEEEEEeCChhhhhc-cCEEEEEeCCEEE
Q 000755 1192 WSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGIIE 1268 (1300)
Q Consensus 1192 LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~ 1268 (1300)
||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 89999999999999999999999999999999999999999998864 36899999999999987 9999999999999
Q ss_pred EecChhhHHhcCC
Q 000755 1269 EYDSPTKLLENKS 1281 (1300)
Q Consensus 1269 e~g~~~~l~~~~~ 1281 (1300)
+.|+++++++.+.
T Consensus 237 ~~g~~~~~~~~~~ 249 (529)
T PRK15134 237 EQNRAATLFSAPT 249 (529)
T ss_pred EeCCHHHHhhCCC
Confidence 9999999976543
No 441
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=335.38 Aligned_cols=205 Identities=24% Similarity=0.348 Sum_probs=169.9
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 680 (1300)
..++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 20 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 3689999999996 3579999999999999999999999999999999999864 6899998875
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCCC----C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKPM----D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~~----~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
.++|++|++.++..|+.||+.++... . +++..++++.+++..++ ....+....+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHH
Confidence 26899999999989999999876321 1 12233444444443222 123456778999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||++||||++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 248 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEE-LITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTE 248 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888864 55555557899999999998764 9999999999999999998
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
++...
T Consensus 249 ~~~~~ 253 (268)
T PRK14248 249 QIFTS 253 (268)
T ss_pred HHHhC
Confidence 88654
No 442
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=324.97 Aligned_cols=190 Identities=24% Similarity=0.385 Sum_probs=160.7
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------eEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKAY 684 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~~ay 684 (1300)
|+++|++|.|+ +.++++|+||++++| +++|+|+||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYG---KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEEC---CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 47899999995 247999999999999 9999999999999999999999999999999987 2699
Q ss_pred EecCCcCCCC-CHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 000755 685 VAQSPWIQSG-NIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 685 v~Q~~~l~~~-Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAl 756 (1300)
++|++.++.. |++||+.+... .+ +++.+++++.+++.+.. .....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-----------KKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-----------hCchhhCCHHHHHHHHHHHHH
Confidence 9999998875 99999986421 12 23445566666665433 234468999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 757 y~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
+++|+++||||||++||+.+.+.+++ .+....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRN-LLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999988865 55555557999999999999865 9999999999998764
No 443
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=338.72 Aligned_cols=204 Identities=25% Similarity=0.388 Sum_probs=166.3
Q ss_pred ceEEEEeEEEEecCCC--CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------
Q 000755 615 TAIEIVDGNFAWDISS--NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------ 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------ 680 (1300)
..|+++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4689999999996321 13699999999999999999999999999999999999999999998876
Q ss_pred ------eEEEEecCCc--CCCCCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHH
Q 000755 681 ------TKAYVAQSPW--IQSGNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGG 745 (1300)
Q Consensus 681 ------~~ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGG 745 (1300)
.++|++|+|. ++..|++|||.|+.. ...+ +..+.++..++.. ...+....+||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~----------~~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPE----------DYVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhcCChhhCCHH
Confidence 2689999984 567899999998642 2222 2223333333311 1234567889999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
||||++||||++.+|+++||||||++||+.+.+.+++ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFIN-LFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999888765 455443 37899999999998764 9999999999999999
Q ss_pred ChHHHHh
Q 000755 823 KYNDILN 829 (1300)
Q Consensus 823 ~~~~l~~ 829 (1300)
+++++..
T Consensus 234 ~~~~~~~ 240 (289)
T PRK13645 234 SPFEIFS 240 (289)
T ss_pred CHHHHhc
Confidence 9888764
No 444
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=333.06 Aligned_cols=204 Identities=28% Similarity=0.430 Sum_probs=170.4
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcCe---------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT--------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g~--------- 681 (1300)
.++++|++|+|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 489999999996 2579999999999999999999999999999999999997 47999988762
Q ss_pred ------EEEEecCCcCCCCCHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 ------KAYVAQSPWIQSGNIEDNILFGKPM----DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 ------~ayv~Q~~~l~~~Ti~eNI~fg~~~----~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
++|++|++.++..|++||+.++... +. +++.++++.+++..+. ....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 6899999999999999999876321 11 2344555555553211 1223567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++++|+++||||||++||+.+.+.+.+ .+..+.+++|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEE-TLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHH-HHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888765 55555567899999999999765 99999999999999999998
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14251 233 MFIA 236 (251)
T ss_pred HHhC
Confidence 8654
No 445
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-36 Score=303.12 Aligned_cols=217 Identities=28% Similarity=0.439 Sum_probs=189.4
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCC----------
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSI---------- 1123 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i---------- 1123 (1300)
.++++|+.++|+.. .|||+||++.+.|+.|.|+|.+||||||++++|.=+..|+.|+|.++|..|...
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 68999999999876 499999999999999999999999999999999999999999999999887532
Q ss_pred ---CHHHHhcccEEEcCCCCCCcc-cHHHhcC--CC---CCCCHH---HHHHHHHHcCCcHHHHhhcCCCccccccCCCC
Q 000755 1124 ---GLHDLRSRLSIIPQDPTMFEG-TVRNNLD--PL---EEYKDE---EIWEALDKCQLGDEVRNKEGKLDSRVTENGEN 1191 (1300)
Q Consensus 1124 ---~~~~lr~~i~~vpQ~~~lf~g-Tvr~Nl~--~~---~~~~d~---~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~ 1191 (1300)
.++.+|+++++|+|...|++- |+.+|+- |. +...++ .....|.++|+.+.....| ..
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----------~~ 152 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP-----------AH 152 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc-----------cc
Confidence 134578999999999999865 9999973 32 222222 3345688898877655544 46
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEE
Q 000755 1192 WSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEE 1269 (1300)
Q Consensus 1192 LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e 1269 (1300)
|||||+||++|||||..+|+++++|||||+|||+-..++.+.+++.. .++|+++|||.+....+ +..|+.|++|.|-|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE 232 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEE 232 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecc
Confidence 79999999999999999999999999999999999999999999876 47999999999999999 89999999999999
Q ss_pred ecChhhHHhcCCCh
Q 000755 1270 YDSPTKLLENKSSS 1283 (1300)
Q Consensus 1270 ~g~~~~l~~~~~~~ 1283 (1300)
+|+|++++.++.|.
T Consensus 233 ~G~P~qvf~nP~S~ 246 (256)
T COG4598 233 EGPPEQVFGNPQSP 246 (256)
T ss_pred cCChHHHhcCCCCH
Confidence 99999999998774
No 446
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.7e-35 Score=340.16 Aligned_cols=201 Identities=25% Similarity=0.424 Sum_probs=167.4
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------eE
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TK 682 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~~ 682 (1300)
..|+++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 3589999999996 35699999999999999999999999999999999999999999999987 36
Q ss_pred EEEecCCcCC-CCCHHHHHhcC-C--CCCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 683 AYVAQSPWIQ-SGNIEDNILFG-K--PMDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 683 ayv~Q~~~l~-~~Ti~eNI~fg-~--~~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
+|++|++.++ ..|++||+.+. . ..+.+ +.+++++.+++.+ .......+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-----------~~~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-----------KADVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-----------HhcCchhhCCHHHHHHHHHHH
Confidence 9999999887 47999999752 2 12222 2333444444432 223455689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
|++.+|+++||||||++||+.+...+.+ .+..+ .+++|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999988875 44443 358899999999999875 999999999999999999988643
No 447
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=331.72 Aligned_cols=202 Identities=31% Similarity=0.444 Sum_probs=166.3
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~a 683 (1300)
++++|++++|+.. .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999631 56999999999999999999999999999999999999999999998872 58
Q ss_pred EEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHH
Q 000755 684 YVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 755 (1300)
Q Consensus 684 yv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARA 755 (1300)
|++|+|.++. .|++||+.++.. .+. ++..++++..++.. .....+.+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999998885 699999987632 221 23334444444332 013356678999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 756 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 756 ly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
++++|++++|||||++||+.+...+.+ ++.... .++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~-~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQE-EFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999887765 444443 37999999999998654 999999999999999998887643
No 448
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=333.25 Aligned_cols=206 Identities=24% Similarity=0.383 Sum_probs=172.0
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 680 (1300)
..++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 4699999999996 2569999999999999999999999999999999999987 6899999876
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCCC---C---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKPM---D---REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~~---~---~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
.++|++|++.++..|++||+.++... . +++..++++.+++...+ .........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 26999999999888999999986532 1 23344455555443222 23346677899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeC-----------C
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKD-----------G 816 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~-----------G 816 (1300)
|++||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+.. ||++++|++ |
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEE-TMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 9999999999999999999999999999888865 55555567899999999998765 999999996 6
Q ss_pred eEEEecChHHHHhcC
Q 000755 817 KITQAGKYNDILNSG 831 (1300)
Q Consensus 817 ~i~~~g~~~~l~~~~ 831 (1300)
++++.|+.+++....
T Consensus 241 ~~~~~~~~~~~~~~~ 255 (269)
T PRK14259 241 YLVEFNETKKIFNSP 255 (269)
T ss_pred eEEEeCCHHHHHhCc
Confidence 789999999987643
No 449
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.9e-35 Score=326.22 Aligned_cols=191 Identities=28% Similarity=0.408 Sum_probs=158.4
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 680 (1300)
++++|++++|+... ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68899999996321 24699999999999999999999999999999999999999999999875
Q ss_pred --eEEEEecCCcCCC-CCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 681 --TKAYVAQSPWIQS-GNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 681 --~~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
.++|++|++.++. .|++||+.++.. .+. ++..++++.+++.+ ........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEH-----------RINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHH
Confidence 2799999998874 699999987421 222 23344444444432 23445578999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeEE
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKIT 819 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~ 819 (1300)
+||||++.+|+++||||||++||+++...+.+ ++..+. .++|+|++||+++++..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFD-LMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999888865 455443 378999999999998889999999999985
No 450
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=336.48 Aligned_cols=203 Identities=29% Similarity=0.431 Sum_probs=171.7
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCc---cEEEEcCe----------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS---GTLKLCGT---------- 681 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~---G~i~~~g~---------- 681 (1300)
..++++|++|+|+.. ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++ |+|.++|.
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999632 3469999999999999999999999999999999999999998 89998772
Q ss_pred ---EEEEecCCc--CCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 682 ---KAYVAQSPW--IQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 682 ---~ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
++|++|+|+ +++.|+.|||.|+.. .+. ++..++++.+++.+.. .....+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYI-----------DSEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHH
Confidence 699999984 568899999998632 223 3355566666665433 34457899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHH
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 827 (1300)
++||||++++|+++||||||++||+.+...+.+ ++..+. .++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILK-LIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEI 230 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999988875 455443 27899999999999888999999999999999999887
Q ss_pred Hhc
Q 000755 828 LNS 830 (1300)
Q Consensus 828 ~~~ 830 (1300)
...
T Consensus 231 ~~~ 233 (282)
T PRK13640 231 FSK 233 (282)
T ss_pred hcC
Confidence 653
No 451
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=324.41 Aligned_cols=191 Identities=26% Similarity=0.418 Sum_probs=159.4
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------eEEEEec
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------TKAYVAQ 687 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------~~ayv~Q 687 (1300)
++++|++++|+ ++++++|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 46899999995 35799999999999999999999999999999999999999999999987 3799999
Q ss_pred CCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 000755 688 SPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 759 (1300)
Q Consensus 688 ~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~ 759 (1300)
++.++. .|++||+.++.. .. +++..+.++..++.. .......+||||||||++||||++.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSE-----------YANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChH-----------HHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 998876 599999987532 11 223344444444433 33456678999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 760 ADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 760 ~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
|+++||||||++||+.+.+.+.+. +... .+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999888764 4443 347899999999998865 9999999999998654
No 452
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=334.26 Aligned_cols=202 Identities=31% Similarity=0.499 Sum_probs=169.8
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.++++|++++|+. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 7 ~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 5899999999962 245799999999999999999999999999999999999999999999877 26
Q ss_pred EEEecCC--cCCCCCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSP--WIQSGNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~--~l~~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|++|+| .+++.|++|||.++.. ++.+ +..++++..++.+.+ .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHHHHHH
Confidence 9999998 4567899999998632 3333 234455555554433 445579999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||++.+|+++||||||++||+.+.+.+++ .+..+. + ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKK-IMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999888875 454443 3 4899999999998888999999999999999998887653
No 453
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=333.16 Aligned_cols=202 Identities=26% Similarity=0.454 Sum_probs=168.9
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 680 (1300)
+.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4689999999996 25799999999999999999999999999999999999999999998876
Q ss_pred ------------eEEEEecCCcCCC-CCHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000755 681 ------------TKAYVAQSPWIQS-GNIEDNILFGK----PMDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERG 739 (1300)
Q Consensus 681 ------------~~ayv~Q~~~l~~-~Ti~eNI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g 739 (1300)
.++|++|++.++. .|++||+.++. ..+. ++..++++..++...+ .+...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 2699999999886 59999998642 1222 2333344444433221 14567
Q ss_pred CCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCe
Q 000755 740 INLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGK 817 (1300)
Q Consensus 740 ~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~ 817 (1300)
.+||||||||++||||++++|+++||||||++||+.+.+.+.+ ++..+. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLR-IMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 7899999999999999999999999999999999999988875 555443 48999999999999886 99999999999
Q ss_pred EEEecChHHHHhc
Q 000755 818 ITQAGKYNDILNS 830 (1300)
Q Consensus 818 i~~~g~~~~l~~~ 830 (1300)
+++.|+++++...
T Consensus 230 i~~~~~~~~~~~~ 242 (257)
T PRK10619 230 IEEEGAPEQLFGN 242 (257)
T ss_pred EEEeCCHHHhhhC
Confidence 9999999988653
No 454
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.7e-35 Score=329.61 Aligned_cols=199 Identities=25% Similarity=0.394 Sum_probs=168.0
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
-|+++|+++.|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFD---GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 378999999996 247999999999999999999999999999999999999999999998872
Q ss_pred EEEEecCCcCCCC-CHHHHHhcCCCCC---------------HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHH
Q 000755 682 KAYVAQSPWIQSG-NIEDNILFGKPMD---------------REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGG 745 (1300)
Q Consensus 682 ~ayv~Q~~~l~~~-Ti~eNI~fg~~~~---------------~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGG 745 (1300)
++|++|++.++.+ |++||+.++...+ +++.++.++.. |..........+||||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G 147 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI-----------GLADEADRLAGLLSHG 147 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHH
Confidence 6899999998875 9999998863211 11222333333 2333445677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecCh
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY 824 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 824 (1300)
||||++||||++.+|++++|||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 148 e~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~ 226 (242)
T TIGR03411 148 QKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAE-LLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSL 226 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCH
Confidence 9999999999999999999999999999999988865 55555567899999999999875 999999999999999999
Q ss_pred HHHHh
Q 000755 825 NDILN 829 (1300)
Q Consensus 825 ~~l~~ 829 (1300)
+++..
T Consensus 227 ~~~~~ 231 (242)
T TIGR03411 227 DQVQA 231 (242)
T ss_pred HHHhc
Confidence 88764
No 455
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=372.89 Aligned_cols=224 Identities=23% Similarity=0.332 Sum_probs=182.8
Q ss_pred ceEEEEeeeeeeCCC--CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecC---------
Q 000755 1053 GEVDILNLQVRYAPH--LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINIS--------- 1121 (1300)
Q Consensus 1053 g~i~~~~v~~~y~~~--~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~--------- 1121 (1300)
..|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.++|+++.
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 369999999999632 236999999999999999999999999999999999999999999999997552
Q ss_pred -CCCHH---HHh-cccEEEcCCC--CCCcc-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhhcCCCcccc
Q 000755 1122 -SIGLH---DLR-SRLSIIPQDP--TMFEG-TVRNNLDPL----EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRV 1185 (1300)
Q Consensus 1122 -~i~~~---~lr-~~i~~vpQ~~--~lf~g-Tvr~Nl~~~----~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v 1185 (1300)
+.+.. .+| ++|+||+|+| .++.. ||++|+... ...+ .+++.++|+.+++.+.- ...
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~--------~~~ 162 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQ--------TIL 162 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChh--------hHH
Confidence 12222 233 4799999998 56664 999998531 1122 23566778888874310 012
Q ss_pred ccCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-C-CcEEEEEeCChhhhhc-cCEEEEE
Q 000755 1186 TENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-S-DCTVITIAHRITSVID-SDMVLLL 1262 (1300)
Q Consensus 1186 ~e~G~~LSgGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~-~~Tvi~iaHrl~~i~~-~D~v~vl 1262 (1300)
.....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl 242 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 242 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEe
Confidence 23346799999999999999999999999999999999999999999999865 3 7899999999999987 9999999
Q ss_pred eCCEEEEecChhhHHhcCCChH
Q 000755 1263 SHGIIEEYDSPTKLLENKSSSF 1284 (1300)
Q Consensus 1263 ~~G~i~e~g~~~~l~~~~~~~f 1284 (1300)
++|++++.|++++++..+...|
T Consensus 243 ~~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 243 YQGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred eCCeecccCCHHHhhcCCCChh
Confidence 9999999999999986544333
No 456
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=330.32 Aligned_cols=204 Identities=27% Similarity=0.420 Sum_probs=170.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCC-----ccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI-----SGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~i~~~g---------- 680 (1300)
.++++|++|+|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 588999999996 256999999999999999999999999999999999999987 69998765
Q ss_pred -----eEEEEecCCcCCCCCHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 -----TKAYVAQSPWIQSGNIEDNILFGKPM----DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 -----~~ayv~Q~~~l~~~Ti~eNI~fg~~~----~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++.++..|++||+.++... .. ++.+++++..++.+.+ ....+..+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-------KDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-------hhHhhCCcccCCHHHH
Confidence 27999999999989999999986421 11 2233333334443222 2335677889999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEE-LMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999888764 55555567999999999999876 89999999999999999988
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 8654
No 457
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=332.99 Aligned_cols=205 Identities=24% Similarity=0.421 Sum_probs=170.9
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 680 (1300)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 3699999999995 35799999999999999999999999999999999999975 799998866
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++.++..|++||+.|+.. .+.+ +.+++++.+++..++ .........+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHH
Confidence 2689999999988999999987632 2222 234455555543222 1234566789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIED-LIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888864 55555567999999999998865 99999999999999999998
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 240 ~~~~ 243 (258)
T PRK14268 240 IFHN 243 (258)
T ss_pred HhcC
Confidence 8653
No 458
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=331.27 Aligned_cols=198 Identities=25% Similarity=0.436 Sum_probs=167.5
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~a 683 (1300)
++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 78999999996 357999999999999999999999999999999999999999999998872 69
Q ss_pred EEecCCcCCCC-CHHHHHhcCCC-----C------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHH
Q 000755 684 YVAQSPWIQSG-NIEDNILFGKP-----M------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 751 (1300)
Q Consensus 684 yv~Q~~~l~~~-Ti~eNI~fg~~-----~------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRia 751 (1300)
|++|++.++.+ |+.||+.++.. + +.++.+++++.+++.+. .......||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHHHHH
Confidence 99999988765 99999998631 1 12234455555555432 23456789999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 752 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 752 LARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
||||+..+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMR-LMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999888865 444433 47899999999998765 99999999999999999988754
No 459
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=329.96 Aligned_cols=204 Identities=27% Similarity=0.416 Sum_probs=170.3
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 680 (1300)
.++++|++++|+ ++++++|+||+|++||+++|+|+||||||||+++|+|.+++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYG---DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEEC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 588999999996 24799999999999999999999999999999999998763 699999876
Q ss_pred -----eEEEEecCCcCCCCCHHHHHhcCCCC----C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 -----TKAYVAQSPWIQSGNIEDNILFGKPM----D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 -----~~ayv~Q~~~l~~~Ti~eNI~fg~~~----~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++.++..|+.||+.++... + +++..++++.+++.+++. ...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 26999999998889999999986321 1 223344455555543332 234567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEE-LIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888864 56655567899999999998765 99999999999999999988
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14240 232 LFTN 235 (250)
T ss_pred HHhC
Confidence 7643
No 460
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.7e-35 Score=348.72 Aligned_cols=200 Identities=26% Similarity=0.467 Sum_probs=171.5
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------eE
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~~ 682 (1300)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 488999999996 35799999999999999999999999999999999999999999999987 26
Q ss_pred EEEecCCcC-CCCCHHHHHhcCCC-----C------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 683 AYVAQSPWI-QSGNIEDNILFGKP-----M------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 683 ayv~Q~~~l-~~~Ti~eNI~fg~~-----~------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
+||+|++.+ ++.|++||+.++.. + +.++.+++++..++.+.. .....+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHH
Confidence 999999987 67899999998752 1 233455666666664332 345678999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 828 (1300)
+|||||+++|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++.+.. ||++++|++|++++.|++++++
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~-lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLE-LVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999888865 455443 47899999999999864 9999999999999999999987
Q ss_pred hc
Q 000755 829 NS 830 (1300)
Q Consensus 829 ~~ 830 (1300)
..
T Consensus 228 ~~ 229 (402)
T PRK09536 228 TA 229 (402)
T ss_pred Cc
Confidence 53
No 461
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=330.20 Aligned_cols=204 Identities=27% Similarity=0.414 Sum_probs=172.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 680 (1300)
-++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 588999999996 25799999999999999999999999999999999999875 799999876
Q ss_pred -----eEEEEecCCcCCCCCHHHHHhcCCCC----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 -----TKAYVAQSPWIQSGNIEDNILFGKPM----DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 -----~~ayv~Q~~~l~~~Ti~eNI~fg~~~----~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++.++..|++||+.|+... +. +++.++++.+++.+++.. ..+.....||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 26999999999999999999976321 21 334556666666433321 23556789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIED-LMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999988865 56555557899999999998765 99999999999999999998
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14270 233 IFLE 236 (251)
T ss_pred HhcC
Confidence 8654
No 462
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.4e-35 Score=322.67 Aligned_cols=195 Identities=21% Similarity=0.252 Sum_probs=167.1
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccE
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLS 1133 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~ 1133 (1300)
.++++|++++|++. ++++++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNEE--PVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCCc--eeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 69999999999753 599999999999999999999999999999999999999999999999988642 3456799
Q ss_pred EEcCCCCCCcc-cHHHhcCCC----CCCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHcc
Q 000755 1134 IIPQDPTMFEG-TVRNNLDPL----EEYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLK 1208 (1300)
Q Consensus 1134 ~vpQ~~~lf~g-Tvr~Nl~~~----~~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~ 1208 (1300)
|+||++.++.+ |+++|+... ....++.+.++++..++.+.. +. ...+||+|||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYE-------DT----LVRQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhhc-------cC----ChhhCCHHHHHHHHHHHHHhc
Confidence 99999998876 999998532 112234556778888765432 22 335799999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeC
Q 000755 1209 KSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSH 1264 (1300)
Q Consensus 1209 ~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~ 1264 (1300)
+|++|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998754 46899999999999987 999999875
No 463
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=362.45 Aligned_cols=207 Identities=22% Similarity=0.321 Sum_probs=176.7
Q ss_pred eEEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCH-HHHhccc
Q 000755 1054 EVDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGL-HDLRSRL 1132 (1300)
Q Consensus 1054 ~i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~-~~lr~~i 1132 (1300)
.|+++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+. ..+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 5899999999975 359999999999999999999999999999999999999999999999999875543 3457789
Q ss_pred EEEcCCCCCCcc-cHHHhcCCCC-----C-CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHH
Q 000755 1133 SIIPQDPTMFEG-TVRNNLDPLE-----E-YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVC 1201 (1300)
Q Consensus 1133 ~~vpQ~~~lf~g-Tvr~Nl~~~~-----~-~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~ 1201 (1300)
+|+||++.+|.. |+++|+.... . .. ++++.++++.+++.+. ......+||||||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~qrv~ 150 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQRQMVE 150 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHHHHHH
Confidence 999999988875 9999986421 1 11 2346667777776432 12234679999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecCh
Q 000755 1202 LGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSP 1273 (1300)
Q Consensus 1202 LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~ 1273 (1300)
|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.+++
T Consensus 151 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 151 IAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999999998864 36899999999999987 999999999999876654
No 464
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=362.70 Aligned_cols=208 Identities=19% Similarity=0.306 Sum_probs=175.9
Q ss_pred EEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHH-HHhcccEEE
Q 000755 1057 ILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLH-DLRSRLSII 1135 (1300)
Q Consensus 1057 ~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~-~lr~~i~~v 1135 (1300)
++|++++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|++++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999965 3599999999999999999999999999999999999999999999999998765543 456789999
Q ss_pred cCCCCCCcc-cHHHhcCCCC----C--CCH----HHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHH
Q 000755 1136 PQDPTMFEG-TVRNNLDPLE----E--YKD----EEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGR 1204 (1300)
Q Consensus 1136 pQ~~~lf~g-Tvr~Nl~~~~----~--~~d----~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LAR 1204 (1300)
||++.++.. |+++|+.... . .+. +++.++++.+++.+ .......+||||||||++|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGq~qrv~lA~ 147 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDI-----------DPRAKVATLSVSQMQMIEIAK 147 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHHHHHHHHHH
Confidence 999987754 9999986421 1 122 23455666665532 223345679999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1205 VLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1205 all~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 148 AFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999999999998864 46899999999999987 9999999999999999988864
No 465
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.2e-35 Score=325.37 Aligned_cols=196 Identities=26% Similarity=0.401 Sum_probs=163.9
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.|+++|++++|+ +.++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 7 ~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 589999999995 357999999999999999999999999999999999999999999998872 6
Q ss_pred EEEecCCcCCCCCHHHHHhcCCC-----CCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 683 AYVAQSPWIQSGNIEDNILFGKP-----MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 683 ayv~Q~~~l~~~Ti~eNI~fg~~-----~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
+|++|++.++..|++||+.++.. .++++..++++..++.+ +.......+||||||||++||||++
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 99999999998999999987421 12233344444444421 2345677899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEe-CCeEEEecChH
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMK-DGKITQAGKYN 825 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~-~G~i~~~g~~~ 825 (1300)
++|+++||||||++||+.+.+.+.+ ++..+. .++|+|++||+++.++.||++++|+ ++..++.|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNE-IIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999887764 455443 3789999999999998899999995 66777778774
No 466
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=334.13 Aligned_cols=203 Identities=27% Similarity=0.428 Sum_probs=171.5
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 489999999997433346999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCc--CCCCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSPW--IQSGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|++|+|. ++..|+.|||.++.. ... ++++++++.+++.... ......||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHHHHH
Confidence 99999984 678899999987532 222 2345566666664332 234578999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLR--SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~--~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||++.+|+++||||||++||+.+...+.+ .+..+.+ +.|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMR-VIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999988875 4554433 7899999999999888999999999999999999988754
No 467
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.8e-35 Score=331.09 Aligned_cols=200 Identities=30% Similarity=0.428 Sum_probs=166.8
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 680 (1300)
.++++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 378999999996 24799999999999999999999999999999999999999999998765
Q ss_pred ------eEEEEecCCcCCC-CCHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHH
Q 000755 681 ------TKAYVAQSPWIQS-GNIEDNILFGK----PMDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGG 745 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~-~Ti~eNI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGG 745 (1300)
.++|++|++.++. .|++||+.++. ..+. ++..+.++..++. ........+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G 148 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA-----------GKETSYPRRLSGG 148 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-----------chhhCChhhCChH
Confidence 2699999998875 79999998642 1222 2233333333332 2335567899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecC
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGK 823 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 823 (1300)
||||++||||+..+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLN-TIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999888875 455443 47899999999999865 99999999999999999
Q ss_pred hHHHHhc
Q 000755 824 YNDILNS 830 (1300)
Q Consensus 824 ~~~l~~~ 830 (1300)
.+++.+.
T Consensus 228 ~~~~~~~ 234 (250)
T PRK11264 228 AKALFAD 234 (250)
T ss_pred HHHHhcC
Confidence 9988654
No 468
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.5e-35 Score=303.10 Aligned_cols=192 Identities=26% Similarity=0.421 Sum_probs=170.1
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 680 (1300)
|+|+|++..|+.+ .++|+||||+|++||++-|+||||||||||+++|.++..|+.|+|.++|
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999843 6799999999999999999999999999999999999999999999988
Q ss_pred eEEEEecCCcC-CCCCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 681 TKAYVAQSPWI-QSGNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 681 ~~ayv~Q~~~l-~~~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
+||+|+||.-+ .+-|+.||+.|... .. +++..++++..+|.+....+| ..|||||+||++|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 46999999976 56799999998654 22 356677888999998888887 5799999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
|||+..+|++||-||||.+||+.++..|++ ++..+ ..|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~-lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMR-LFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHH-HHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999985 44443 569999999999999987 5789999999998543
No 469
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3e-35 Score=334.23 Aligned_cols=200 Identities=27% Similarity=0.362 Sum_probs=167.4
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 680 (1300)
.|+++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 589999999995 35799999999999999999999999999999999999999999999876
Q ss_pred -eEEEEecCCcCCCC-CHHHHHhcCC----CCCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHH
Q 000755 681 -TKAYVAQSPWIQSG-NIEDNILFGK----PMDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 681 -~~ayv~Q~~~l~~~-Ti~eNI~fg~----~~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRi 750 (1300)
.++|++|++.++.. |+.||+.++. ..+.+ +..+.++..++.. .......+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRG-----------AAKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHH
Confidence 26899999998875 9999998742 12222 2333444444432 22345578999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 751 aLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
+||||++.+|+++||||||++||+.+.+.+.+ ++..+. .++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVK-LISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999888765 455443 27899999999998875 999999999999999999998
Q ss_pred Hhc
Q 000755 828 LNS 830 (1300)
Q Consensus 828 ~~~ 830 (1300)
.+.
T Consensus 232 ~~~ 234 (269)
T PRK11831 232 QAN 234 (269)
T ss_pred hcC
Confidence 764
No 470
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=333.17 Aligned_cols=205 Identities=24% Similarity=0.408 Sum_probs=170.4
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 680 (1300)
..++++|+++.|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 23 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 23 VVFDTQNLNLWYG---EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred eEEEEeeeEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 3699999999996 2469999999999999999999999999999999999987 6999999876
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC---C-CHHH----HHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP---M-DREK----YDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~---~-~~~~----~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
.++|++|++.++..|++|||.++.. . +++. ..++++..++..++ ....+..+.+|||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHH
Confidence 2699999999998999999987532 1 1111 12233333322222 233467788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||++||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||+|++|++|++++.|+++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 251 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEE-LVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTD 251 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999988865 56655567999999999999765 9999999999999999999
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
++...
T Consensus 252 ~~~~~ 256 (271)
T PRK14238 252 KIFSN 256 (271)
T ss_pred HHHcC
Confidence 98754
No 471
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=329.44 Aligned_cols=204 Identities=27% Similarity=0.399 Sum_probs=169.0
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcCe---------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g~--------- 681 (1300)
.++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFG---QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEEC---CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 488999999996 24799999999999999999999999999999999999974 7999998873
Q ss_pred ----EEEEecCCcC-CCCCHHHHHhcCCCC-----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 ----KAYVAQSPWI-QSGNIEDNILFGKPM-----DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 ----~ayv~Q~~~l-~~~Ti~eNI~fg~~~-----~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
++|++|++.+ ++.|++||+.++... .. ++..++++.+++.+.++ ........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHH
Confidence 6899999975 468999999876321 11 23344555555533221 223556678999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||+.++|++++|||||++||+.+...+.+ ++..+.+++|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIES-LFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTRE 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHH
Confidence 99999999999999999999999999999988875 4555556799999999999876 599999999999999999998
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14247 232 VFTN 235 (250)
T ss_pred HHcC
Confidence 8654
No 472
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=3.1e-35 Score=325.34 Aligned_cols=198 Identities=21% Similarity=0.321 Sum_probs=164.2
Q ss_pred EEEEeeeeeeCCC-----CCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEEC--Ce--ecCCCCH
Q 000755 1055 VDILNLQVRYAPH-----LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVID--GI--NISSIGL 1125 (1300)
Q Consensus 1055 i~~~~v~~~y~~~-----~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~id--g~--di~~i~~ 1125 (1300)
|+++|++++|+.. .+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+| |. ++..++.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 7899999999631 2469999999999999999999999999999999999999999999998 42 6665555
Q ss_pred HH---H-hcccEEEcCCCCCCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCC
Q 000755 1126 HD---L-RSRLSIIPQDPTMFEG-TVRNNLDPL---EEYK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWS 1193 (1300)
Q Consensus 1126 ~~---l-r~~i~~vpQ~~~lf~g-Tvr~Nl~~~---~~~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LS 1193 (1300)
.. + +++++|+||++.++.. |+++|+... .... ++++.++++..++.+... ...+.+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~----------~~~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLW----------HLPPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh----------hCCcccCC
Confidence 43 3 4579999999988865 999998531 1121 345667788877754321 12356799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEE
Q 000755 1194 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLL 1262 (1300)
Q Consensus 1194 gGqrQrl~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl 1262 (1300)
+|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|+.+
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999999999999864 37899999999999876 9999876
No 473
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-35 Score=331.56 Aligned_cols=204 Identities=26% Similarity=0.409 Sum_probs=172.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g---------- 680 (1300)
.++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 10 ~l~i~~v~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYG---SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEEC---CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 589999999996 2479999999999999999999999999999999999976 4799998876
Q ss_pred -----eEEEEecCCcCCCCCHHHHHhcCCCC---C---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 -----TKAYVAQSPWIQSGNIEDNILFGKPM---D---REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 -----~~ayv~Q~~~l~~~Ti~eNI~fg~~~---~---~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++|++|++.+++.|+.|||.++... . +++..++++.+++..++.. ..+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 26999999999888999999986431 1 2344555666666544431 2456778999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEe---------CCeEE
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMK---------DGKIT 819 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~---------~G~i~ 819 (1300)
++||||++++|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||+|++|+ +|+++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~ 238 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEE-LMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV 238 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999888764 56655567899999999998765 99999998 89999
Q ss_pred EecChHHHHhc
Q 000755 820 QAGKYNDILNS 830 (1300)
Q Consensus 820 ~~g~~~~l~~~ 830 (1300)
+.|+.+++...
T Consensus 239 ~~~~~~~~~~~ 249 (264)
T PRK14243 239 EFDRTEKIFNS 249 (264)
T ss_pred EeCCHHHHHhC
Confidence 99999998754
No 474
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=330.68 Aligned_cols=199 Identities=22% Similarity=0.359 Sum_probs=166.5
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
.++++|+++.|+ +.++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 589999999995 357999999999999999999999999999999999999999999999873
Q ss_pred EEEEecCCcCCCC-CHHHHHhcCCCC----------------C---H---HHHHHHHHHhcchHHHhhccCCCcccccCC
Q 000755 682 KAYVAQSPWIQSG-NIEDNILFGKPM----------------D---R---EKYDRVLEACSLKKDLEILSFGDQTVIGER 738 (1300)
Q Consensus 682 ~ayv~Q~~~l~~~-Ti~eNI~fg~~~----------------~---~---~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~ 738 (1300)
++|++|++.++.. |++|||.++... . . ++..+.++.. |.....+.+
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~ 150 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV-----------GLLEHANRQ 150 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC-----------ChhhhhhCC
Confidence 5789999998875 999999986310 0 0 1122222222 333445677
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCcccc-CCEEEEEeC
Q 000755 739 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLPA-ADLILVMKD 815 (1300)
Q Consensus 739 g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~~-~d~i~~l~~ 815 (1300)
..+||||||||++||||++.+|+++||||||++||+.+.+.+.+ .+..+. + ++|+|++||+++.+.. ||++++|++
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDE-LIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 88999999999999999999999999999999999999888865 454443 3 7899999999999865 999999999
Q ss_pred CeEEEecChHHHHh
Q 000755 816 GKITQAGKYNDILN 829 (1300)
Q Consensus 816 G~i~~~g~~~~l~~ 829 (1300)
|++++.|+.+++..
T Consensus 230 g~i~~~~~~~~~~~ 243 (255)
T PRK11300 230 GTPLANGTPEEIRN 243 (255)
T ss_pred CeEEecCCHHHHhh
Confidence 99999999888754
No 475
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.2e-35 Score=324.12 Aligned_cols=188 Identities=28% Similarity=0.421 Sum_probs=157.5
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe---------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 681 (1300)
++++|++++|+. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 468999999952 247999999999999999999999999999999999999999999998763
Q ss_pred -EEEEecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 -KAYVAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 -~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
++|++|++.++. .|++||+.++.. .+ +++..+.++.+++...+ .....+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-----------RALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHH
Confidence 699999998886 599999987632 12 23445556666665433 23446899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeE
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKI 818 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i 818 (1300)
|||++.+|+++||||||++||+++.+.+.+ .+..+ .+++|+|++||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMN-LLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999888865 44444 357999999999999875 999999999974
No 476
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=327.47 Aligned_cols=199 Identities=28% Similarity=0.416 Sum_probs=165.4
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
.++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 378999999996 257999999999999999999999999999999999999999999998763
Q ss_pred -----EEEEecCCcCCC-CCHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 682 -----KAYVAQSPWIQS-GNIEDNILFGK----PMDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 682 -----~ayv~Q~~~l~~-~Ti~eNI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
++|++|++.++. .|+.|||.++. .... ++..+.++..++ +..+.....+||||||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~ 147 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRL-----------KPYADRFPLHLSGGQQ 147 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHH
Confidence 689999998886 59999997431 1111 223333333333 3334555679999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
||++||||++.+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~ 226 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVS-IIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888865 555443 47999999999999865 9999999999999999988
Q ss_pred HHHh
Q 000755 826 DILN 829 (1300)
Q Consensus 826 ~l~~ 829 (1300)
++..
T Consensus 227 ~~~~ 230 (242)
T PRK11124 227 CFTQ 230 (242)
T ss_pred HhcC
Confidence 8653
No 477
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.4e-35 Score=319.31 Aligned_cols=193 Identities=22% Similarity=0.288 Sum_probs=164.5
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCCCcceEEECCeecCCCCHHHHhcccEE
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSI 1134 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p~~G~I~idg~di~~i~~~~lr~~i~~ 1134 (1300)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .....|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 789999999975 359999999999999999999999999999999999999999999999998864 34567889999
Q ss_pred EcCCCCCCc-ccHHHhcCCCC--CCCHHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHHHHHHHHHccCCC
Q 000755 1135 IPQDPTMFE-GTVRNNLDPLE--EYKDEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSK 1211 (1300)
Q Consensus 1135 vpQ~~~lf~-gTvr~Nl~~~~--~~~d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQrl~LARall~~~~ 1211 (1300)
+||++.++. .|+++|+.... ...+..+.++++..++.+... . ...+||+|||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHLID-------Y----PCGLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchhhh-------C----ChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998874 69999986421 122345777888887754322 2 224699999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhccCEEEE
Q 000755 1212 VLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVIDSDMVLL 1261 (1300)
Q Consensus 1212 iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~~D~v~v 1261 (1300)
+|||||||++||+.+.+.+.+.|++.. .++|+|++||+.+.+..||.-.+
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999853 47899999999999988987543
No 478
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-35 Score=333.28 Aligned_cols=203 Identities=28% Similarity=0.410 Sum_probs=172.6
Q ss_pred eEEEEeEEEEecCCC---CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC------------
Q 000755 616 AIEIVDGNFAWDISS---NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------ 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~---~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------ 680 (1300)
-++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999996321 35799999999999999999999999999999999999999999999886
Q ss_pred --eEEEEecCCc--CCCCCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 --TKAYVAQSPW--IQSGNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 --~~ayv~Q~~~--l~~~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++|++|+|. ++..|+.||+.|+.. .+ +++++++++.+++.+.++ ....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRR-----------HAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHH
Confidence 2589999984 566799999998732 22 234566677777755443 3446899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHH
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 827 (1300)
++||||++.+|+++||||||++||+.+...+.+ ++..+. .+.|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVN-TIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999998865 555543 37899999999999888999999999999999999998
Q ss_pred Hhc
Q 000755 828 LNS 830 (1300)
Q Consensus 828 ~~~ 830 (1300)
...
T Consensus 232 ~~~ 234 (280)
T PRK13633 232 FKE 234 (280)
T ss_pred hcC
Confidence 754
No 479
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.9e-35 Score=324.59 Aligned_cols=194 Identities=28% Similarity=0.404 Sum_probs=162.0
Q ss_pred eEEEEeEEEEecCCCC-CCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------
Q 000755 616 AIEIVDGNFAWDISSN-NPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 680 (1300)
.++++|++++|+.... .++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999963221 3599999999999999999999999999999999999999999998876
Q ss_pred ---eEEEEecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 681 ---TKAYVAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 681 ---~~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
.++|++|++.++. .|+.||+.++.. .+ .++..++++.+++.+.++ ....+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHH
Confidence 3789999998876 599999986421 11 234556666666654433 3346899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCccccCCEEEEEeCCeEEEe
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLPAADLILVMKDGKITQA 821 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~ 821 (1300)
++||||++.+|+++||||||++||+.+...+++ .+..+. + ++|+|++||+++++..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIAD-LLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999888865 454442 3 7899999999999888999999999999753
No 480
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-35 Score=333.05 Aligned_cols=205 Identities=29% Similarity=0.466 Sum_probs=172.1
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC---------
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 680 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 680 (1300)
..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 24 ~~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 24 TALEVRNLNLFYG---DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred cEEEEEEEEEEEC---CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 4699999999995 2479999999999999999999999999999999999987 4899998876
Q ss_pred ------eEEEEecCCcCCCCCHHHHHhcCCC---C-C----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHH
Q 000755 681 ------TKAYVAQSPWIQSGNIEDNILFGKP---M-D----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ------~~ayv~Q~~~l~~~Ti~eNI~fg~~---~-~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQ 746 (1300)
.++|++|++.++..|++||+.++.. . . +++.+++++..++.+++. +..+.++.+|||||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHHH
Confidence 3589999999998899999987632 1 1 123445555555543332 24567788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 747 kqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 825 (1300)
|||++||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEE-LITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999887764 5555556789999999999876 49999999999999999999
Q ss_pred HHHhc
Q 000755 826 DILNS 830 (1300)
Q Consensus 826 ~l~~~ 830 (1300)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 88653
No 481
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.5e-35 Score=326.20 Aligned_cols=197 Identities=30% Similarity=0.495 Sum_probs=164.5
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------eE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------TK 682 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~~ 682 (1300)
++++|+++.|+ +.++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 46899999996 24799999999999999999999999999999999999999999999876 26
Q ss_pred EEEecCCcCCCC-CHHHHHhcCCCC-C---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 683 AYVAQSPWIQSG-NIEDNILFGKPM-D---REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 683 ayv~Q~~~l~~~-Ti~eNI~fg~~~-~---~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
+|++|++.++.. |++||+.++... . .+.+.++++..+. ..........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 899999998875 999999876432 1 1222333333221 122345667789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
++|+++||||||++||+.+...+.+ .+.... .++|+|++||+++.+.. ||+|+++++|++++.|+.+++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGR-VIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999888865 454443 27899999999999885 999999999999999998886
No 482
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=321.23 Aligned_cols=189 Identities=29% Similarity=0.445 Sum_probs=159.1
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-----------EEEE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 685 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------~ayv 685 (1300)
|+++|++++|+. .. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 468999999962 22 3999999999999999999999999999999999999999999883 7999
Q ss_pred ecCCcCCCC-CHHHHHhcCCCC-------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 000755 686 AQSPWIQSG-NIEDNILFGKPM-------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 757 (1300)
Q Consensus 686 ~Q~~~l~~~-Ti~eNI~fg~~~-------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly 757 (1300)
+|++.++.. |++||+.++... ++++..++++.+++.+..+. ...+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ia~al~ 144 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKR-----------LPGELSGGERQRVALARVLV 144 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHHHHh
Confidence 999998864 999999876421 23355666777666544433 34589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000755 758 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 822 (1300)
Q Consensus 758 ~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g 822 (1300)
.+|+++||||||++||+++...+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 ~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 145 RDKPVLLLDEPFAALDPALRAEMLD-LVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999888865 455443 37899999999999876 9999999999998654
No 483
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=331.95 Aligned_cols=200 Identities=26% Similarity=0.372 Sum_probs=168.6
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC-------------e
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------T 681 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 681 (1300)
..++++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 10 ~~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 86 (265)
T PRK10575 10 TTFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARK 86 (265)
T ss_pred ceEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhh
Confidence 3699999999996 24799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC--------C---CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP--------M---DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 749 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~--------~---~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqR 749 (1300)
++|++|++-++. .|+.||+.++.. . ++++.+++++.+++.+.++ ....+||||||||
T Consensus 87 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qr 155 (265)
T PRK10575 87 VAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAH-----------RLVDSLSGGERQR 155 (265)
T ss_pred eEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCCHHHHHH
Confidence 699999976654 599999997631 1 1234556666666654332 3345899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000755 750 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 750 iaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 826 (1300)
++||||+..+|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~~~~-~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~ 234 (265)
T PRK10575 156 AWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLA-LVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAE 234 (265)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 999999999999999999999999999888765 455443 3789999999999986 499999999999999999888
Q ss_pred HHh
Q 000755 827 ILN 829 (1300)
Q Consensus 827 l~~ 829 (1300)
+..
T Consensus 235 ~~~ 237 (265)
T PRK10575 235 LMR 237 (265)
T ss_pred hcC
Confidence 754
No 484
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4e-35 Score=361.80 Aligned_cols=211 Identities=22% Similarity=0.325 Sum_probs=178.2
Q ss_pred EEEEeeeeeeCCCCCcceeeeeEEeeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CcceEEECCeecCCCCHHH-Hhcc
Q 000755 1055 VDILNLQVRYAPHLPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLIQTLFRIVEP--TAGEIVIDGINISSIGLHD-LRSR 1131 (1300)
Q Consensus 1055 i~~~~v~~~y~~~~~~vL~~isl~i~~Ge~vgIvG~tGsGKSTLl~~L~gl~~p--~~G~I~idg~di~~i~~~~-lr~~ 1131 (1300)
|+++|++++|++ .++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999965 3599999999999999999999999999999999999987 7999999999998776554 4567
Q ss_pred cEEEcCCCCCCcc-cHHHhcCCCCC-------CC----HHHHHHHHHHcCCcHHHHhhcCCCccccccCCCCCChhHHHH
Q 000755 1132 LSIIPQDPTMFEG-TVRNNLDPLEE-------YK----DEEIWEALDKCQLGDEVRNKEGKLDSRVTENGENWSMGQRQL 1199 (1300)
Q Consensus 1132 i~~vpQ~~~lf~g-Tvr~Nl~~~~~-------~~----d~~i~~~l~~~~l~~~i~~~~~gLdt~v~e~G~~LSgGqrQr 1199 (1300)
++|+||++.+|.. |+++|+..... .. ++++.++++.+++.+... + .....||||||||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~----~~~~~LSgG~~qr 149 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNV------T----RPVGDYGGGQQQL 149 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcc------c----CchhhCCHHHHHH
Confidence 9999999988865 99999864211 11 124566777777643210 1 1235799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCcEEEEEeCChhhhhc-cCEEEEEeCCEEEEecChhhHH
Q 000755 1200 VCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGIIEEYDSPTKLL 1277 (1300)
Q Consensus 1200 l~LARall~~~~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~Tvi~iaHrl~~i~~-~D~v~vl~~G~i~e~g~~~~l~ 1277 (1300)
++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.+++++..
T Consensus 150 v~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 150 VEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999999998864 46899999999999987 9999999999999999877653
No 485
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.3e-35 Score=323.95 Aligned_cols=187 Identities=25% Similarity=0.421 Sum_probs=157.4
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 680 (1300)
++++|++++|+. +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 688999999952 35799999999999999999999999999999999999999999998876
Q ss_pred eEEEEecCCcCCC-CCHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 681 TKAYVAQSPWIQS-GNIEDNILFGKP---MD----REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 681 ~~ayv~Q~~~l~~-~Ti~eNI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
.++|++|+|.++. .|++||+.++.. .+ +++.++.++..++.+.++ ....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKAD-----------AFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHH
Confidence 2689999999885 699999987521 22 234556666666654333 3346899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCe
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGK 817 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~ 817 (1300)
|||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILD-LLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999988875 444443 47999999999999876 99999999985
No 486
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-35 Score=331.00 Aligned_cols=202 Identities=23% Similarity=0.376 Sum_probs=169.1
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.++++|++++|+. ...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 7 ~l~i~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQS-DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCC-CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 5899999999963 2246999999999999999999999999999999999999999999999873 5
Q ss_pred EEEecCCc--CCCCCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSPW--IQSGNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+|++|+|+ ++..|+++|+.|+.. ...+ +.+++++..++.+. ......+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHHHHHH
Confidence 89999995 456799999988742 2222 33344444444322 2345678999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||++.+|+++||||||++||+.+.+.+++ ++..+. .++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLD-LVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999988875 555443 37899999999998878999999999999999999988654
No 487
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=328.24 Aligned_cols=198 Identities=29% Similarity=0.439 Sum_probs=167.7
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------EE
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 683 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~a 683 (1300)
++++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 78999999996 257999999999999999999999999999999999999999999999873 68
Q ss_pred EEecCCcC-CCCCHHHHHhcCCC-C------CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHH
Q 000755 684 YVAQSPWI-QSGNIEDNILFGKP-M------DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 755 (1300)
Q Consensus 684 yv~Q~~~l-~~~Ti~eNI~fg~~-~------~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARA 755 (1300)
|++|++.+ +..|++||+.++.. . .+++.+++++..++... ......+||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHL-----------AGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhH-----------hcCCcccCCHHHHHHHHHHHH
Confidence 99999987 67899999988642 1 12234455555555432 234567899999999999999
Q ss_pred Hc------cCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000755 756 LY------QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 756 ly------~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 826 (1300)
++ .+|+++||||||++||+.+.+.+.+ ++..+. +++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLR-LARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAE 227 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHH
Confidence 99 5999999999999999999888864 555543 4789999999999987 599999999999999999988
Q ss_pred HHh
Q 000755 827 ILN 829 (1300)
Q Consensus 827 l~~ 829 (1300)
+..
T Consensus 228 ~~~ 230 (258)
T PRK13548 228 VLT 230 (258)
T ss_pred HhC
Confidence 764
No 488
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-35 Score=330.39 Aligned_cols=203 Identities=28% Similarity=0.439 Sum_probs=168.5
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEEcC-----------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG----------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g----------- 680 (1300)
-+++|++|+|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 46899999995 3579999999999999999999999999999999999986 4799999876
Q ss_pred ----eEEEEecCCcCCCCCHHHHHhcCCC-----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 ----TKAYVAQSPWIQSGNIEDNILFGKP-----MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 ----~~ayv~Q~~~l~~~Ti~eNI~fg~~-----~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++.++..|+.||+.++.. .+. ++..++++..++.+++. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 2689999999998999999987621 111 22334445444433221 234567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 826 (1300)
||++||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIEN-LIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQE 234 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888764 55555568999999999999875 99999999999999999988
Q ss_pred HHhc
Q 000755 827 ILNS 830 (1300)
Q Consensus 827 l~~~ 830 (1300)
+.+.
T Consensus 235 ~~~~ 238 (251)
T PRK14244 235 IFKN 238 (251)
T ss_pred HhcC
Confidence 8754
No 489
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-35 Score=326.65 Aligned_cols=199 Identities=24% Similarity=0.390 Sum_probs=166.1
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--------------e
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 681 (1300)
.++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 478999999996 25799999999999999999999999999999999999999999999877 2
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCC----CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKP----MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~----~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
++|++|++.++. .|++||+.++.. .+.+ +.++.++..+ ..........+||||||||++|
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~l 148 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFH-----------IEHLRDSMGQSLSGGERRRVEI 148 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcC-----------CHHHhhcchhhCCHHHHHHHHH
Confidence 699999998876 599999987532 1221 2233333332 2333456678999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|||++.+|+++||||||++||+.+...+.+ .+..+. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 149 ARALAANPKFILLDEPFAGVDPISVIDIKR-IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999888764 444433 47999999999987754 99999999999999999988864
No 490
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-35 Score=325.00 Aligned_cols=204 Identities=21% Similarity=0.338 Sum_probs=164.9
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe--------------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 681 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 681 (1300)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 488999999996 357999999999999999999999999999999999999999999998872
Q ss_pred EEEEecCCcCCC-CCHHHHHhcCCCC-CHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 000755 682 KAYVAQSPWIQS-GNIEDNILFGKPM-DREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 759 (1300)
Q Consensus 682 ~ayv~Q~~~l~~-~Ti~eNI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~ 759 (1300)
++|++|++.++. .|++||+.++... +.++.++.++. -++.++... ........+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~l~~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKW-----VYELFPRLH-ERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHH-----HHHHHHHHH-HHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 689999998887 5999999886432 22222221111 111111011 112345678999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000755 760 ADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILN 829 (1300)
Q Consensus 760 ~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 829 (1300)
|+|+||||||++||+.+.+.+.+ .+..+ .+++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFD-TIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999888875 44444 35899999999999765 499999999999999999998864
No 491
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=332.18 Aligned_cols=199 Identities=24% Similarity=0.389 Sum_probs=166.2
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe---------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 681 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 681 (1300)
++++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 67899999996 357999999999999999999999999999999999999999999988762
Q ss_pred EEEEecCCc--CCCCCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHH
Q 000755 682 KAYVAQSPW--IQSGNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 752 (1300)
Q Consensus 682 ~ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaL 752 (1300)
++|++|++. ++..|+.+|+.++.. .+.+ +..++++..++.... .....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 689999985 567799999987521 2222 234455555553322 34567899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 753 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 753 ARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
|||++.+|+++||||||++||+.+...+.+ ++..+. +++|+|++||+++.+.. ||++++|++|++++.|+.+++...
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIA-IIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999888865 454443 47899999999999865 999999999999999999887653
No 492
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.3e-35 Score=330.42 Aligned_cols=208 Identities=24% Similarity=0.358 Sum_probs=168.9
Q ss_pred eEEEEeEEEEecCC------CCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------
Q 000755 616 AIEIVDGNFAWDIS------SNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------- 680 (1300)
.++++|++|+|+.. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999632 135799999999999999999999999999999999999999999999876
Q ss_pred -------eEEEEecCCc--C-CCCCHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCC
Q 000755 681 -------TKAYVAQSPW--I-QSGNIEDNILFGK----PMDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINL 742 (1300)
Q Consensus 681 -------~~ayv~Q~~~--l-~~~Ti~eNI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~L 742 (1300)
.++|++|+|. + ...|++|||.++. .++. ++..++++..++.. ...+..+.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhC
Confidence 2799999983 3 3579999997532 1222 23334444444421 1235567889
Q ss_pred CHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEE
Q 000755 743 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKIT 819 (1300)
Q Consensus 743 SGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~ 819 (1300)
|||||||++||||++++|+++||||||++||+.+...+.+ ++..+. .++|+|+|||+++.+.. ||++++|++|+++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 230 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILE-LLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV 230 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE
Confidence 9999999999999999999999999999999999887765 555543 27899999999999875 9999999999999
Q ss_pred EecChHHHHhcCchH
Q 000755 820 QAGKYNDILNSGTDF 834 (1300)
Q Consensus 820 ~~g~~~~l~~~~~~~ 834 (1300)
+.|+.+++......+
T Consensus 231 ~~g~~~~~~~~~~~~ 245 (265)
T TIGR02769 231 EECDVAQLLSFKHPA 245 (265)
T ss_pred EECCHHHHcCCCCHH
Confidence 999999987644333
No 493
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-35 Score=328.25 Aligned_cols=203 Identities=27% Similarity=0.419 Sum_probs=170.1
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 680 (1300)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 478999999996 35799999999999999999999999999999999999986 599999876
Q ss_pred ----eEEEEecCCcCCCCCHHHHHhcCCC---C-CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 681 ----TKAYVAQSPWIQSGNIEDNILFGKP---M-DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 681 ----~~ayv~Q~~~l~~~Ti~eNI~fg~~---~-~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
.++|++|++.++..|+.||+.++.. . ++ ++..++++..++.+++. +.......+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 2689999999988999999987632 1 11 22334444455543332 2345677899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 827 (1300)
|++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEE-LMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999888765 56666567899999999999776 999999999999999998887
Q ss_pred Hh
Q 000755 828 LN 829 (1300)
Q Consensus 828 ~~ 829 (1300)
..
T Consensus 232 ~~ 233 (249)
T PRK14253 232 FS 233 (249)
T ss_pred Hc
Confidence 54
No 494
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=329.42 Aligned_cols=204 Identities=27% Similarity=0.427 Sum_probs=168.7
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccC-----CccEEEEcC----------
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG---------- 680 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 680 (1300)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYG---SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeC---CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 488999999996 25799999999999999999999999999999999999987 499998876
Q ss_pred -----eEEEEecCCcCCCC-CHHHHHhcCCCC-----CH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHH
Q 000755 681 -----TKAYVAQSPWIQSG-NIEDNILFGKPM-----DR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGG 745 (1300)
Q Consensus 681 -----~~ayv~Q~~~l~~~-Ti~eNI~fg~~~-----~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGG 745 (1300)
.++|++|++.++.. |+.||+.++... .. ++..++++..++..++. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 26899999998864 999999875311 12 22334444444432221 2345677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecCh
Q 000755 746 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY 824 (1300)
Q Consensus 746 QkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 824 (1300)
||||++||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEE-LLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999888865 55555557899999999998765 999999999999999999
Q ss_pred HHHHhc
Q 000755 825 NDILNS 830 (1300)
Q Consensus 825 ~~l~~~ 830 (1300)
+++.+.
T Consensus 233 ~~~~~~ 238 (253)
T PRK14267 233 RKVFEN 238 (253)
T ss_pred HHHHhC
Confidence 988654
No 495
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.1e-35 Score=326.02 Aligned_cols=195 Identities=29% Similarity=0.453 Sum_probs=156.8
Q ss_pred EEEEeEEEEecCCC-CCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC---------------
Q 000755 617 IEIVDGNFAWDISS-NNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 680 (1300)
++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68899999996321 13799999999999999999999999999999999999999999999876
Q ss_pred -eEEEEecCCc--C-CCCCHHHHHhcCCC-----CCHHHHH----HHHHHhcchHHHhhccCCCcccccCCCCCCCHHHH
Q 000755 681 -TKAYVAQSPW--I-QSGNIEDNILFGKP-----MDREKYD----RVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 -~~ayv~Q~~~--l-~~~Ti~eNI~fg~~-----~~~~~~~----~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQk 747 (1300)
.++|++|++. + ...|++||+.++.. .+++..+ +.++..++. ....+....+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLP----------EEVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCC----------hhHhhCCchhcCHHHH
Confidence 2689999993 3 35799999986421 1111111 222222221 1234567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc-C-CcEEEEEecCCCccc-cCCEEEEEeCCeEEEec
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-R-SKTVIYVTHQVEFLP-AADLILVMKDGKITQAG 822 (1300)
Q Consensus 748 qRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l-~-~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g 822 (1300)
||++||||++.+|+++||||||++||+.+.+.+.+ .+..+. + ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILD-LLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999888865 455443 3 789999999999987 59999999999998654
No 496
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=5.6e-35 Score=308.15 Aligned_cols=162 Identities=27% Similarity=0.445 Sum_probs=146.9
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC--eEEEEecCCcCCCC
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSG 694 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~~ayv~Q~~~l~~~ 694 (1300)
|+++|++++|+. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++|++|++++++.
T Consensus 1 i~~~~~~~~~~~--~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (166)
T cd03223 1 IELENLSLATPD--GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLG 78 (166)
T ss_pred CEEEEEEEEcCC--CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccc
Confidence 468999999952 25799999999999999999999999999999999999999999999987 79999999999999
Q ss_pred CHHHHHhcCCCCCHHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 000755 695 NIEDNILFGKPMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDA 774 (1300)
Q Consensus 695 Ti~eNI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLARAly~~~~illLDep~saLD~ 774 (1300)
|++||+.++ ....||||||||++||||++++|++++|||||++||+
T Consensus 79 tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~ 124 (166)
T cd03223 79 TLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166)
T ss_pred cHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCH
Confidence 999999864 2468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEEecCCCccccCCEEEEEeCCe
Q 000755 775 HTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGK 817 (1300)
Q Consensus 775 ~t~~~i~~~~~~~~l~~~TvIlvtH~~~~l~~~d~i~~l~~G~ 817 (1300)
++.+.+.+ .+... ++|+|++||+++....||+|++|++|.
T Consensus 125 ~~~~~l~~-~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 125 ESEDRLYQ-LLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred HHHHHHHH-HHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99888865 44443 689999999999877899999998864
No 497
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.7e-35 Score=328.96 Aligned_cols=199 Identities=29% Similarity=0.408 Sum_probs=166.6
Q ss_pred EEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcC----------------
Q 000755 617 IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------- 680 (1300)
Q Consensus 617 I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 680 (1300)
|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFG---ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeC---CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 47899999996 25799999999999999999999999999999999999999999998876
Q ss_pred ----------eEEEEecCCcCC-CCCHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCC
Q 000755 681 ----------TKAYVAQSPWIQ-SGNIEDNILFGKP----MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGIN 741 (1300)
Q Consensus 681 ----------~~ayv~Q~~~l~-~~Ti~eNI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~ 741 (1300)
.++|++|++.++ ..|+.||+.++.. ... +++.+.++..++.+ .......+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLAD-----------KADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------HhhcChhh
Confidence 268999999887 4799999987521 222 23344444444432 33456678
Q ss_pred CCHHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeE
Q 000755 742 LSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKI 818 (1300)
Q Consensus 742 LSGGQkqRiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i 818 (1300)
||||||||++||||++++|+++||||||++||+.+...+++ .+..+. .++|+|++||+++.+. .||++++|++|++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i 225 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLN-VIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRI 225 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999888865 455443 3789999999999986 4999999999999
Q ss_pred EEecChHHHHhc
Q 000755 819 TQAGKYNDILNS 830 (1300)
Q Consensus 819 ~~~g~~~~l~~~ 830 (1300)
++.|+++++.+.
T Consensus 226 ~~~g~~~~~~~~ 237 (252)
T TIGR03005 226 VEQGKPDEIFRQ 237 (252)
T ss_pred EEeCCHHHHhcC
Confidence 999999988654
No 498
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-35 Score=331.59 Aligned_cols=201 Identities=31% Similarity=0.470 Sum_probs=169.5
Q ss_pred eEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe-------------E
Q 000755 616 AIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 682 (1300)
Q Consensus 616 ~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------~ 682 (1300)
.++++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4789999999952 246999999999999999999999999999999999999999999999873 6
Q ss_pred EEEecCCc--CCCCCHHHHHhcCCC---CCHH----HHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHH
Q 000755 683 AYVAQSPW--IQSGNIEDNILFGKP---MDRE----KYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 683 ayv~Q~~~--l~~~Ti~eNI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLA 753 (1300)
+||+|+|. +++.|+.||+.++.. .+.+ ++++.++.+++.+.+ ......||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELR-----------DRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHHHHHH
Confidence 99999983 678899999987532 3332 345566666665433 334568999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 754 RAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||++.+|+++||||||++||+.+.+.+.+ .+..+. .+.|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELID-FLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999888765 454443 2789999999999985 5999999999999999999998653
No 499
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-35 Score=330.06 Aligned_cols=201 Identities=23% Similarity=0.331 Sum_probs=169.5
Q ss_pred cceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------
Q 000755 614 ETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 681 (1300)
Q Consensus 614 ~~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 681 (1300)
...|+++|++++|+ +.++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~~~l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (265)
T PRK10253 5 VARLRGEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVAR 81 (265)
T ss_pred ccEEEEEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhh
Confidence 34799999999996 246999999999999999999999999999999999999999999999873
Q ss_pred -EEEEecCCcCC-CCCHHHHHhcCC-CC-------C---HHHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHH
Q 000755 682 -KAYVAQSPWIQ-SGNIEDNILFGK-PM-------D---REKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 682 -~ayv~Q~~~l~-~~Ti~eNI~fg~-~~-------~---~~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkq 748 (1300)
++|++|++.++ +.|++||+.++. +. . .++.+++++..++.+. ......+|||||||
T Consensus 82 ~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~q 150 (265)
T PRK10253 82 RIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQ 150 (265)
T ss_pred heEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHH
Confidence 69999999876 479999998762 11 1 2234455555555432 34566789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--RSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 825 (1300)
Q Consensus 749 RiaLARAly~~~~illLDep~saLD~~t~~~i~~~~~~~~l--~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 825 (1300)
|++||||++++|+++||||||++||+.+...+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 rv~laral~~~p~llllDEPt~gLD~~~~~~l~~-~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 229 (265)
T PRK10253 151 RAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLE-LLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPK 229 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999998875 444443 37899999999998765 9999999999999999998
Q ss_pred HHHh
Q 000755 826 DILN 829 (1300)
Q Consensus 826 ~l~~ 829 (1300)
++..
T Consensus 230 ~~~~ 233 (265)
T PRK10253 230 EIVT 233 (265)
T ss_pred HHhh
Confidence 8764
No 500
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.6e-35 Score=340.88 Aligned_cols=201 Identities=25% Similarity=0.414 Sum_probs=168.3
Q ss_pred ceEEEEeEEEEecCCCCCCceecceeEEeCCcEEEEEcCCCCChHHHHHHHhccccCCccEEEEcCe------------E
Q 000755 615 TAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------K 682 (1300)
Q Consensus 615 ~~I~i~~~~fs~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------~ 682 (1300)
..|+++|++++|+ +..+|+|+||+|++|++++++||||||||||+++|+|+++|++|+|.++|. +
T Consensus 40 ~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~i 116 (340)
T PRK13536 40 VAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARI 116 (340)
T ss_pred eeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccE
Confidence 4699999999996 356999999999999999999999999999999999999999999999873 6
Q ss_pred EEEecCCcCC-CCCHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHhhccCCCcccccCCCCCCCHHHHHHHHHHH
Q 000755 683 AYVAQSPWIQ-SGNIEDNILFGKP---MDR----EKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 754 (1300)
Q Consensus 683 ayv~Q~~~l~-~~Ti~eNI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~Gd~t~ige~g~~LSGGQkqRiaLAR 754 (1300)
+|++|++.++ ..|++||+.|... .+. ++.+++++.+++.+ ....+..+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-----------~~~~~~~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-----------KADARVSDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhCCChhhCCHHHHHHHHHHH
Confidence 9999999885 6799999975221 222 22333444444332 223455689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000755 755 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LRSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 755 Aly~~~~illLDep~saLD~~t~~~i~~~~~~~~-l~~~TvIlvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 830 (1300)
||.++|+++||||||++||+.++..+++ .+..+ ..++|+|++||+++.+.. ||+|++|++|+++..|+.+++.+.
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~-~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999998875 44443 358999999999999875 999999999999999999998653
Done!