Query 000755
Match_columns 1300
No_of_seqs 493 out of 5231
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 17:27:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000755.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_525-529//hhsearch_pdb/000755hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1488.7 97.9 1041 242-1291 2-1316(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1189.8 95.8 991 296-1294 44-1273(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 661.8 57.7 544 298-842 750-1317(1321)
4 4a82_A Cystic fibrosis transme 1.0 1 1 654.7 67.1 547 291-839 5-574 (578)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 644.8 70.0 549 288-841 11-578 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 644.0 63.5 544 294-842 31-591 (598)
7 3b60_A Lipid A export ATP-bind 1.0 1 1 618.4 71.5 543 291-840 16-578 (582)
8 3b5x_A Lipid A export ATP-bind 1.0 1 1 617.7 75.7 544 291-841 16-579 (582)
9 2yl4_A ATP-binding cassette SU 1.0 1 1 617.3 69.9 547 292-841 11-583 (595)
10 3g5u_A MCG1178, multidrug resi 1.0 1 1 570.3 58.4 546 295-842 700-1271(1284)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1488.71 Aligned_cols=1041 Identities=20% Similarity=0.230 Sum_probs=803.1
Q ss_pred HHHCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-----------HCCCCCCCHHHHHHHHH-HHHHH---HHH
Q ss_conf 98004-6988888998999889330089999999888331-----------06877610369999999-69999---999
Q 000755 242 ISLGN-KKTLDLEDVPQLDSGDSVVGCFPIFRNKLEANRV-----------EGNKVTAFKLTKALFFS-AWKEI---VFT 305 (1300)
Q Consensus 242 ~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~-----------~~~~~~~~~l~~~l~~~-~~~~~---~~~ 305 (1300)
++-|. +++|+..|.+.+.|+|..+...+.+++.|..... +++..++.+ ++.+++. -+++. +++
T Consensus 2 ~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 2 LRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVS-IPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp --CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCC-HHHHTTTCCHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC-HHHHHHCCCHHHHHHHHHH
T ss_conf 877310068763544567950111000011345424355433431001223202568779-9997315676789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC--------C-------C-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999974288--------7-------5-----204689999999999999999999999999
Q 000755 306 AILALLYTLANYVGPYLIDTFVQYLNGE--------R-------E-----FKNEGYVLVSTFFVAKIVECLAQRHWMFRL 365 (1300)
Q Consensus 306 ~~~~l~~~~~~~~~P~ll~~li~~l~~~--------~-------~-----~~~~g~~l~~~l~~~~l~~~l~~~~~~~~~ 365 (1300)
.+++++..+...+.++++..+++.+.+. . . +......++..++...+...++.....+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999971699000147899899999999999999999-79367999999998888999788779999
Q 000755 366 QVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFG-WYMHDPWLVILQVSLALLILYKNLGLASI 444 (1300)
Q Consensus 366 ~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~-~~~~~~~~~plqi~i~l~lL~~~lG~a~l 444 (1300)
...+.|+...++..+|+|.++++..+++++++|+++|++++|++++.+++ ..+..++..++.++.++++++..-...++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999932999998482799999999999999999999999979
Q 000755 445 AALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGA 524 (1300)
Q Consensus 445 ~gl~~~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~ 524 (1300)
+.++++++.+++...+.++..+..++.++..+++.+.++|.++|||+||+|+||+.+.+++.+..+...+...+......
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999--9899999999999983587688889999999999999999999999999999999999999745778886
Q 000755 525 MTSFVFWG--APTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQS 602 (1300)
Q Consensus 525 ~~~~~~~~--~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 602 (1300)
........ ...++.+++++.+.+.++.+++|.+++++.++..+..|+..++..+..+.++.+|++||.++++.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred CCCC-CCCCCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-
Q ss_conf 3224-79999985309999689983499999930011168738939999847999958999997312658863799749-
Q 000755 603 DVVE-KHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG- 680 (1300)
Q Consensus 603 ~~~~-~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g- 680 (1300)
+... ..+.....+.|+++|++|+|+..++.++|+|+||++++|+++||||++|||||||+++|+|+|++.+|+|.++|
T Consensus 401 ~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG~ 480 (1321)
T 4f4c_A 401 SSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGV 480 (1321)
T ss_dssp CSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETTE
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 66655656778887679998554079999874333318862288278998058985778888754565164486157996
Q ss_pred ------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ------------3899815886888878899842999-999999999998252578864158986423678887897899
Q 000755 681 ------------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 ------------~iayv~Q~pwi~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQk 747 (1300)
.++||+|+||||++||||||+||+| .+++++.++++.|++++||+.||+||+|+|||+|.+||||||
T Consensus 481 ~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQk 560 (1321)
T 4f4c_A 481 DVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQK 560 (1321)
T ss_dssp ETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHHH
T ss_pred CCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHHH
T ss_conf 50112599985046665875332078616788641552209999999987565468870888886075589887777787
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999805998899816777889989999999999760299579999059883023988999939859891386889
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 748 qRIaLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~el 827 (1300)
|||+||||+|+||+||||||||||||+++++ ++++++.+++++||+|+|||++++++.||+|++|++|+|+++|+|+||
T Consensus 561 QRiaiARAl~~~~~IliLDE~tSaLD~~te~-~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~eL 639 (1321)
T 4f4c_A 561 QRIAIARALVRNPKILLLDEATSALDAESEG-IVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRAL 639 (1321)
T ss_dssp HHHHHHHHHTTCCSEEEEESTTTTSCTTTHH-HHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHH-HHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHHH
T ss_conf 9999999872599989984554468878999-999999998479889997363878986898999639965136899999
Q ss_pred HHCCCHHHHHHHHHHHHHHHHCCCC------C---------CCC----CCCC--------C----CC-C-CCCCCCCC--
Q ss_conf 8128617999998898744202467------9---------996----2112--------2----23-3-47886555--
Q 000755 828 LNSGTDFMVLVGAHQQALSALDSIE------G---------GPV----SERI--------S----MN-K-ENGGMDTT-- 872 (1300)
Q Consensus 828 l~~~~~~~~l~~~~~~~~~~~~~~~------~---------~~~----~~~~--------~----~~-~-~~~~e~~~-- 872 (1300)
++.++.|.+++..+..........+ . ... .... . .. . ..+++++.
T Consensus 640 ~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1321)
T 4f4c_A 640 MAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIG 719 (1321)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------------------------------CCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCC
T ss_conf 98532799999962212222332334433223211122222342222222110221110132124567740257775315
Q ss_pred -------------CCC----------------------------------------------------------------
Q ss_conf -------------564----------------------------------------------------------------
Q 000755 873 -------------NGV---------------------------------------------------------------- 875 (1300)
Q Consensus 873 -------------~g~---------------------------------------------------------------- 875 (1300)
.+.
T Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1321)
T 4f4c_A 720 KDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALM 799 (1321)
T ss_dssp CCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 40389999999970786310999999987789999999999999999999999999999987517934556678999999
Q ss_pred -------------------------------------------------CCCCCC--CCCCCCC--H-------------
Q ss_conf -------------------------------------------------446765--4322220--3-------------
Q 000755 876 -------------------------------------------------TMKEGN--EDIQTDK--V------------- 889 (1300)
Q Consensus 876 -------------------------------------------------~lp~Gr--nr~s~D~--v------------- 889 (1300)
..|+|+ ||+++|+ +
T Consensus 800 ~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~ 879 (1321)
T 4f4c_A 800 FLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVIT 879 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998887349933321678884888850250599999999999999999
Q ss_pred --------------------------------HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHH
Q ss_conf --------------------------------3453058--899999998451214889999985013999871636899
Q 000755 890 --------------------------------DEQYYIP--SARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRF 935 (1300)
Q Consensus 890 --------------------------------~~~~y~~--~~r~l~rl~~~~~spi~~~~~etl~G~~tIraf~~~~~f 935 (1300)
...++.+ ..++.++. ...+....++.|++.|+.|||+|+.+++|
T Consensus 880 ~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~e~l~gi~tIra~~~e~~~ 957 (1321)
T 4f4c_A 880 TLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSA--SEFADSGKIAIEAIENVRTVQALAREDTF 957 (1321)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTS--SHHHHHHHHHHHHHHTHHHHHHTTTHHHH
T ss_pred HHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 8653777702213786899999999888999999999999999999999--99888988999999627988861414889
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999998204248999988899999999999999999999998-814--88656889999999999999999999999
Q 000755 936 RDTNMKLVDGYSRPKFHIAGAMEWLCFRLDMLSSLTFAFSLVLLI-SIP--KGVIEPAIAGLAVTYGLNLNMLQAWVIWN 1012 (1300)
Q Consensus 936 ~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~-~~~--~~~~~~~~~gl~l~y~l~~~~~~~~~i~~ 1012 (1300)
.+++.+..+...+..+.....+.+.......+..+...++..+.. .+. ...+.++.+...+.+.......+.++...
T Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1037 (1321)
T 4f4c_A 958 YENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSY 1037 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999875788753765421478999999998778899999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCEEEEEEEEECCCEEEEECCC
Q ss_conf 99998878799999975228899987544689999999975089984245648998-94113115996489399999799
Q 000755 1013 LCNLENKIISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPHL-PLVLRGLTCTFPGGMKTGIVGRT 1091 (1300)
Q Consensus 1013 ~~~le~~~~sveRi~~y~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nl~~~Y~~~~-~~vL~~is~~i~~GekigIVGrT 1091 (1300)
+.+++..+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+++|+.+. .+||+|+||+|++||++||||||
T Consensus 1038 ~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~S 1114 (1321)
T 4f4c_A 1038 FPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPS 1114 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECST
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCC
T ss_conf 9999999999998999860766577---7667787888888189998798579999882124516998898999998999
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHC----CCCCCCCHHHHHHHHHH
Q ss_conf 98599999999517799952699989646888977773021888178877865478713----87988999999999998
Q 000755 1092 GSGKSTLIQTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNL----DPLEEYKDEEIWEALDK 1167 (1300)
Q Consensus 1092 GsGKSTLl~~L~rl~~p~~G~I~Idg~di~~i~l~~lR~~i~iIpQdp~lF~gTiR~NL----dp~~~~sd~ei~~aL~~ 1167 (1300)
|||||||+++|+|+++|++|+|.|||+||+++++++||+++++|||||+||+||||+|+ || ++++|+++|+|+++
T Consensus 1115 GsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~-~~~sd~ei~~Al~~ 1193 (1321)
T 4f4c_A 1115 GCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDP-SSVTMAQVEEAARL 1193 (1321)
T ss_dssp TSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCT-TTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCC-CCCCHHHHHHHHHH
T ss_conf 98199999999568638997899999986549999998545998789973272399997454999-99999999999998
Q ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 39967897210787631236999889469999999998715998899857876989999999999999826992799992
Q 000755 1168 CQLGDEVRNKEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIA 1247 (1300)
Q Consensus 1168 ~~L~~~i~~~~~~Ld~~v~e~g~nlS~GQrQll~LARaLL~~~~ILiLDEaTa~lD~~Td~~Iq~~i~~~f~~~TvI~Ia 1247 (1300)
+++++++.++|+||||.|+|+|.|||+|||||+|||||+||+|+|||||||||++|.+||+.||++|++.+++||+|+||
T Consensus 1194 a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IA 1273 (1321)
T 4f4c_A 1194 ANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIA 1273 (1321)
T ss_dssp TTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEEC
T ss_pred HCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 29849997176789998238891569999999999999971799899968111578999999999999973999899960
Q ss_pred CCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 79024440488999949879786595468721897699999999
Q 000755 1248 HRITSVIDSDMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEY 1291 (1300)
Q Consensus 1248 Hrl~ti~~~D~Vlvl~~G~i~e~g~p~~Ll~~~~s~f~~lv~~~ 1291 (1300)
||++|+++||+|+|||+|+|+|+|+|++|+++ +|.|++|+++-
T Consensus 1274 HRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q 1316 (1321)
T 4f4c_A 1274 HRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQ 1316 (1321)
T ss_dssp SSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C----------
T ss_pred CCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 68999996999999989899998888999849-80999999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1189.85 Aligned_cols=991 Identities=18% Similarity=0.232 Sum_probs=749.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------C----------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 996999999999999999999999999999999742887---------5----------204689999999999999999
Q 000755 296 FSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGER---------E----------FKNEGYVLVSTFFVAKIVECL 356 (1300)
Q Consensus 296 ~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~---------~----------~~~~g~~l~~~l~~~~l~~~l 356 (1300)
+..|..++++.++.++..++..+.|++++.+++.+.... . .......++..++...++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1284)
T 3g5u_A 44 WLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLI 123 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999998613444332222221111100244688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999716990001478998999999999999999997-9367999999998888999
Q 000755 357 AQRHWMFRLQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLIL 435 (1300)
Q Consensus 357 ~~~~~~~~~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~~-~~~~~~~~plqi~i~l~lL 435 (1300)
+.....+...+.+.++...++..+|+|.++++..+++++++|+++|++++|++.+.++.. .+..+....+.++.+++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1284)
T 3g5u_A 124 VAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIG 203 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998699899756887789999998899999999999999999999999999999
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 78-87799999999999999999999999999999999999999999999993299999848279999999999999999
Q 000755 436 YK-NLGLASIAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAG 514 (1300)
Q Consensus 436 ~~-~lG~a~l~gl~~~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~ 514 (1300)
+. .+.+ +++.+++++++..+..++.+...+..++.++..++......|.++||++||.|++|+.+.+++.+.-+.-.+
T Consensus 204 ~~~~~~l-~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~ 282 (1284)
T 3g5u_A 204 FTRGWKL-TLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKR 282 (1284)
T ss_dssp HHTTSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 9998999-999999999999999999999999999999999999999999997879999846539999999999999999
Q ss_pred HHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999979999-99-999989999999999998358768888999999999999999999999999999999999999
Q 000755 515 WLKKFLYTGAMTS-FV-FWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIA 592 (1300)
Q Consensus 515 ~l~~~~~~~~~~~-~~-~~~~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~ 592 (1300)
...+......... +. +......+.+++++.+.+..+.++.|.+++++.+......|+..+...+..+.++..+.+|+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 362 (1284)
T 3g5u_A 283 LGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVF 362 (1284)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999929988999999999999999999999999999999999999999
Q ss_pred HHHCCCCCCCC-CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 97457788863-22479999985309999689983499999930011168738939999847999958999997312658
Q 000755 593 SFLCLDDLQSD-VVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK 671 (1300)
Q Consensus 593 ~fL~~~e~~~~-~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~ 671 (1300)
++++.++..+. .....+.....+.|+++|++|+|+...+.++|+|+||++++|++++|+|++|||||||+++|+|++++
T Consensus 363 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~ 442 (1284)
T 3g5u_A 363 KIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDP 442 (1284)
T ss_dssp HTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 99728986776665677777777718999989976999987101254589759988999899999799999998078899
Q ss_pred CCCEEEECCE-------------EEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCC
Q ss_conf 8637997493-------------899815886888878899842999-99999999999825257886415898642367
Q 000755 672 ISGTLKLCGT-------------KAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGE 737 (1300)
Q Consensus 672 ~~G~I~v~g~-------------iayv~Q~pwi~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe 737 (1300)
.+|+|.++|. ++||+|+||++++||+|||.||.+ .+++++.++++.|+++++++.+|+|++|.+||
T Consensus 443 ~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~ 522 (1284)
T 3g5u_A 443 LDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGE 522 (1284)
T ss_dssp SEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSS
T ss_pred CCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCC
T ss_conf 97389999998775799999865489868875377669999745798999999999999829699997465633450147
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCE
Q ss_conf 88878978999999999980599889981677788998999999999976029957999905988302398899993985
Q 000755 738 RGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGK 817 (1300)
Q Consensus 738 ~G~~LSGGQkqRIaLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~ 817 (1300)
+|.+|||||||||+||||+|++|+|++||||||+||+++++.+ ++++....+++|+|+|||+++++..||+|++|++|+
T Consensus 523 ~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~ 601 (1284)
T 3g5u_A 523 RGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVV-QAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGV 601 (1284)
T ss_dssp SSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHH-HHHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCE
T ss_conf 8786599999999999999529998999798777799999999-999999739998999940778997499899998999
Q ss_pred EEEECCHHHHHHCCCHHHHHHHHHHHHHHHH---------CCCCC---C---CC-------CCCC---CC---CCC-CCC
Q ss_conf 9891386889812861799999889874420---------24679---9---96-------2112---22---334-788
Q 000755 818 ITQAGKYNDILNSGTDFMVLVGAHQQALSAL---------DSIEG---G---PV-------SERI---SM---NKE-NGG 868 (1300)
Q Consensus 818 I~~~G~~~ell~~~~~~~~l~~~~~~~~~~~---------~~~~~---~---~~-------~~~~---~~---~~~-~~~ 868 (1300)
|++.|+|+|+++.++.|..++..+....... ..... . .. .... .. ... ..+
T Consensus 602 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1284)
T 3g5u_A 602 IVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQDRKLSTK 681 (1284)
T ss_dssp CCCEECHHHHHHTTSHHHHHHHHTC-------------------------------------------------------
T ss_pred EEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99978899998678779999997430022111333333222223443333333320003454333445642233211024
Q ss_pred CCCCCC------------------------------------------------------C-------------------
Q ss_conf 655556------------------------------------------------------4-------------------
Q 000755 869 MDTTNG------------------------------------------------------V------------------- 875 (1300)
Q Consensus 869 e~~~~g------------------------------------------------------~------------------- 875 (1300)
++.+.+ .
T Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 761 (1284)
T 3g5u_A 682 EALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGII 761 (1284)
T ss_dssp --CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 55531366258999999845157999999999999999999999999999999855685033677999999999999999
Q ss_pred ------------------------------------------CCCCCC--CCCCCCC-HHHHH-----------------
Q ss_conf ------------------------------------------446765--4322220-33453-----------------
Q 000755 876 ------------------------------------------TMKEGN--EDIQTDK-VDEQY----------------- 893 (1300)
Q Consensus 876 ------------------------------------------~lp~Gr--nr~s~D~-v~~~~----------------- 893 (1300)
..|+|+ ||+++|. .+...
T Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~ 841 (1284)
T 3g5u_A 762 SFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGT 841 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998399888757899889999999999999999999999999999999999
Q ss_pred -----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf -----------------------------058899999998451214889999985013999871636899999999998
Q 000755 894 -----------------------------YIPSARELSRLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLVD 944 (1300)
Q Consensus 894 -----------------------------y~~~~r~l~rl~~~~~spi~~~~~etl~G~~tIraf~~~~~f~~~~~~~~d 944 (1300)
+....+...+......+....++.|+++|+.+||+|+.++++.+++.+..+
T Consensus 842 ~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~ 921 (1284)
T 3g5u_A 842 GIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQ 921 (1284)
T ss_dssp HHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999999699999999999999999999999999999999999999999999999889999984659999999999999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20424899998889999999999999---999999999-88148865688999999999999999999999999998878
Q 000755 945 GYSRPKFHIAGAMEWLCFRLDMLSSL---TFAFSLVLL-ISIPKGVIEPAIAGLAVTYGLNLNMLQAWVIWNLCNLENKI 1020 (1300)
Q Consensus 945 ~~~~~~~~~~~~~~wl~~rl~~l~~~---~~~~~~~~~-~~~~~~~~~~~~~gl~l~y~l~~~~~~~~~i~~~~~le~~~ 1020 (1300)
...+...... .|.+....+...+ ..+.+..+. ..+..+.++.+.+...+.+.......+..+.....++...+
T Consensus 922 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1284)
T 3g5u_A 922 IPYRNAMKKA---HVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKAT 998 (1284)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHH
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999---9999999999999999999999999999990980699999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCHHHHH
Q ss_conf 79999997522889998754468999999997508998424564899-89411311599648939999979998599999
Q 000755 1021 ISVERILQYTCISSEPPLVIEESRPDCSWPTHGEVDILNLQVRYAPH-LPLVLRGLTCTFPGGMKTGIVGRTGSGKSTLI 1099 (1300)
Q Consensus 1021 ~sveRi~~y~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nl~~~Y~~~-~~~vL~~is~~i~~GekigIVGrTGsGKSTLl 1099 (1300)
.+.+|+.++.+.+++.... ...+.+.|+..|.|+++|++++|+.. ..++|+|+||++++||++||||+||||||||+
T Consensus 999 ~a~~ri~~~l~~~~~~~~~--~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~ 1076 (1284)
T 3g5u_A 999 VSASHIIRIIEKTPEIDSY--STQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVV 1076 (1284)
T ss_dssp HHHHHHHHHHHSCCSSSSC--CSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHH
T ss_conf 9999999998388766665--55665456777857999989977999987002030599769988999889999789999
Q ss_pred HHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHCCCCHHHHH
Q ss_conf 999517799952699989646888977773021888178877865478713879---88999999999998399678972
Q 000755 1100 QTLFRIVEPTAGEIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPL---EEYKDEEIWEALDKCQLGDEVRN 1176 (1300)
Q Consensus 1100 ~~L~rl~~p~~G~I~Idg~di~~i~l~~lR~~i~iIpQdp~lF~gTiR~NLdp~---~~~sd~ei~~aL~~~~L~~~i~~ 1176 (1300)
++|+|+++|++|+|.+||+|++.++++++|+++++|||||.+|++|||+|+.+. ...++++++++++++++.+++.+
T Consensus 1077 ~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~ 1156 (1284)
T 3g5u_A 1077 QLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDS 1156 (1284)
T ss_dssp HHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSS
T ss_pred HHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHH
T ss_conf 99946867899779899998000789999702689877874066669999746687789999999999998395999972
Q ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCC
Q ss_conf 10787631236999889469999999998715998899857876989999999999999826992799992790244404
Q 000755 1177 KEGKLDSRVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDS 1256 (1300)
Q Consensus 1177 ~~~~Ld~~v~e~g~nlS~GQrQll~LARaLL~~~~ILiLDEaTa~lD~~Td~~Iq~~i~~~f~~~TvI~IaHrl~ti~~~ 1256 (1300)
+|+|+|+.++|+|.+||||||||+|||||++++|+||+|||||+++|.++++.|++.|++..+++|+|+||||++++.+|
T Consensus 1157 l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~ 1236 (1284)
T 3g5u_A 1157 LPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNA 1236 (1284)
T ss_dssp TTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTGGGSC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCC
T ss_conf 70424561178889338999999999999974999999868755579999999999999867999899995587999809
Q ss_pred CEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 88999949879786595468721897699999999520
Q 000755 1257 DMVLLLSHGIIEEYDSPTKLLENKSSSFAQLVAEYTQR 1294 (1300)
Q Consensus 1257 D~Vlvl~~G~i~e~g~p~~Ll~~~~s~f~~lv~~~~~~ 1294 (1300)
|||+||++|+++|.|+|++|+++ +|.|++|++.....
T Consensus 1237 dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~~~ 1273 (1284)
T 3g5u_A 1237 DLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQAGA 1273 (1284)
T ss_dssp SEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC--
T ss_pred CEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 98999989989997789999847-77799999997613
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=661.76 Aligned_cols=544 Identities=17% Similarity=0.212 Sum_probs=412.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69999999999999999999999999999997428875-20468999999999999999999999999999999999999
Q 000755 298 AWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGERE-FKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMRSVL 376 (1300)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~-~~~~g~~l~~~l~~~~l~~~l~~~~~~~~~~~~g~~ir~~L 376 (1300)
+|+.+++..++.++........++++...++....... ....+.++++.+++..++..++.....+...+.+.++...+
T Consensus 750 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~l 829 (1321)
T 4f4c_A 750 HALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDL 829 (1321)
T ss_dssp GHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999987517934556678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCHHHCC--CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999971699000147--899899999999999999999-79367999999998888999788779999999999999
Q 000755 377 VSMVYNKGLTLSCQAKQS--YTSGEIINFMTVDAERIGDFG-WYMHDPWLVILQVSLALLILYKNLGLASIAALFATVLI 453 (1300)
Q Consensus 377 ~~~Iy~K~L~ls~~~~~~--~~~G~Iinlis~D~~~i~~~~-~~~~~~~~~plqi~i~l~lL~~~lG~a~l~gl~~~ii~ 453 (1300)
+..+|+|.++.+...++. +++|+++|+++.|++.+.++. ..+..++...+.++.++++++..-...+++.+++++++
T Consensus 830 r~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~ 909 (1321)
T 4f4c_A 830 RNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIV 909 (1321)
T ss_dssp HHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
T ss_conf 99998887349933321678884888850250599999999999999999865377770221378689999999988899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999932999998482799999999999999999999999979999999999
Q 000755 454 MLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWGA 533 (1300)
Q Consensus 454 ~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~ 533 (1300)
..+.+...+...+.+.+..+...+......|.++|+++||.|++|+.+.+++.+.-+...+...+...............
T Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1321)
T 4f4c_A 910 AFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSV 989 (1321)
T ss_dssp HHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999988898899999962798886141488999999999999999999999999999999999
Q ss_pred HH--HHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 89--9999999999983587--6888899999999999999999999999999999999999997457788863224799
Q 000755 534 PT--FVSVATFGACMLLGIP--LESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHP 609 (1300)
Q Consensus 534 p~--~v~~~tf~~~~~~~~~--Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~ 609 (1300)
.. .+.++.++.+.+..+. +.+..++..+..+.....|+..+...+..+.++..+.+|+.++++.++..++.....+
T Consensus 990 ~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~ 1069 (1321)
T 4f4c_A 990 LYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGE 1069 (1321)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCCSB
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999987578875376542147899999999877889999999999999999999989998607665777667787
Q ss_pred CCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE--------
Q ss_conf 999853099996899834999999300111687389399998479999589999973126588637997493--------
Q 000755 610 RGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------- 681 (1300)
Q Consensus 610 ~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g~-------- 681 (1300)
..+..+.|+|+|++|+|+...+.++|+|+||+|++|+++||||++|||||||+++|+|.++|.+|+|.+||.
T Consensus 1070 ~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~ 1149 (1321)
T 4f4c_A 1070 KKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPE 1149 (1321)
T ss_dssp CCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHH
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHH
T ss_conf 88888818999879857999988212451699889899999899998199999999568638997899999986549999
Q ss_pred -----EEEEECCCCCCCCCHHHHHHCCC---CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf -----89981588688887889984299---9999999999998252578864158986423678887897899999999
Q 000755 682 -----KAYVAQSPWIQSGNIEDNILFGK---PMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 753 (1300)
Q Consensus 682 -----iayv~Q~pwi~~gTIreNIlfG~---~~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQkqRIaLA 753 (1300)
++||||+|++|+|||||||.||. ..++++..++++.|+++++++.+|+|++|.|||+|.||||||||||+||
T Consensus 1150 ~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiA 1229 (1321)
T 4f4c_A 1150 HTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIA 1229 (1321)
T ss_dssp HHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHH
T ss_pred HHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHH
T ss_conf 99854599878997327239999745499999999999999998298499971767899982388915699999999999
Q ss_pred HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCCH
Q ss_conf 99805998899816777889989999999999760299579999059883023988999939859891386889812861
Q 000755 754 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTD 833 (1300)
Q Consensus 754 RAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~ell~~~~~ 833 (1300)
||++++|+|++|||||||||++|++.| ++.+....++||+|+||||++++..||+|+||++|+|+|.|+|+||++.++.
T Consensus 1230 RAllr~~~ILiLDEaTSaLD~~tE~~I-q~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~ 1308 (1321)
T 4f4c_A 1230 RALVRNPKILLLDEATSALDTESEKVV-QEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGA 1308 (1321)
T ss_dssp HHHHSCCSEEEEESCCCSTTSHHHHHH-HHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC--
T ss_pred HHHHHCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCH
T ss_conf 999717998999681115789999999-9999997399989996068999996999999989899998888999849809
Q ss_pred HHHHHHHHH
Q ss_conf 799999889
Q 000755 834 FMVLVGAHQ 842 (1300)
Q Consensus 834 ~~~l~~~~~ 842 (1300)
|.++++.+.
T Consensus 1309 y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1309 YYKLTQKQM 1317 (1321)
T ss_dssp ---------
T ss_pred HHHHHHHHH
T ss_conf 999999998
No 4
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=654.72 Aligned_cols=547 Identities=22% Similarity=0.262 Sum_probs=457.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999699999999999999999999999999999974288752--046----8999999999999999999999999
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREF--KNE----GYVLVSTFFVAKIVECLAQRHWMFR 364 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~--~~~----g~~l~~~l~~~~l~~~l~~~~~~~~ 364 (1300)
++.+++.+++.++...++.++..++..+.|++++.+++.+...... ... .+.+++++++..++..++.....+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (578)
T 4a82_A 5 YLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYL 84 (578)
T ss_dssp HHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999999999999999999999999999998168711467788889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999716990001478998999999999999999997-936799999999888899978877999
Q 000755 365 LQVAGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILYKNLGLAS 443 (1300)
Q Consensus 365 ~~~~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~~-~~~~~~~~plqi~i~l~lL~~~lG~a~ 443 (1300)
..+++.++...++..+|+|.++++...+++.++|+++|++++|++++.++.. .+..+|..++.+++++++++...+..+
T Consensus 85 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~ 164 (578)
T 4a82_A 85 AQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLT 164 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999878999976898699999999999999999999999999999999999999999969999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999993299999848279999999999999999999999997
Q 000755 444 IAALFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTG 523 (1300)
Q Consensus 444 l~gl~~~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~ 523 (1300)
++.+++++++.++...+.++..+..++.++..+++.+.+.|.++||++||.|+||+.+.+++.+..+...+...+.....
T Consensus 165 l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (578)
T 4a82_A 165 LAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWN 244 (578)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999982499999816649999999999999999999999999
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999999999--89999999999998358768888999999999999999999999999999999999999974577888
Q 000755 524 AMTSFVFWGA--PTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQ 601 (1300)
Q Consensus 524 ~~~~~~~~~~--p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~ 601 (1300)
.......... ...+.++.++.+.+..+.++.|.+++++.++..+..|+..++..+..+.++.+|++||.++++.++..
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~ 324 (578)
T 4a82_A 245 AYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDI 324 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999859958999999999999999999999999999999999999999997689766
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-
Q ss_conf 6322479999985309999689983499999930011168738939999847999958999997312658863799749-
Q 000755 602 SDVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG- 680 (1300)
Q Consensus 602 ~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g- 680 (1300)
++.....+.......++++|++|+|+. .+.++|+|+||++++|+.++|+||+|||||||+++|+|+++|.+|+|.++|
T Consensus 325 ~~~~~~~~~~~~~~~i~~~~v~~~y~~-~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 403 (578)
T 4a82_A 325 KNGVGAQPIEIKQGRIDIDHVSFQYND-NEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGH 403 (578)
T ss_dssp CCCTTCCCCCCCSCCEEEEEEEECSCS-SSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTE
T ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 678776666777880799999997589-9974134337998799999998999985999999984678899967999999
Q ss_pred ------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ------------3899815886888878899842999-999999999998252578864158986423678887897899
Q 000755 681 ------------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQK 747 (1300)
Q Consensus 681 ------------~iayv~Q~pwi~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQk 747 (1300)
.++||+|+||++++||+|||.||.+ .++++..++++.++++++++.+|+|++|.+||+|.+||||||
T Consensus 404 ~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~LSgGq~ 483 (578)
T 4a82_A 404 NIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQK 483 (578)
T ss_dssp EGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHH
T ss_pred EHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHH
T ss_conf 84427899996006899289834764599998527999889999999988095999975733010253068896799999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999805998899816777889989999999999760299579999059883023988999939859891386889
Q 000755 748 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDI 827 (1300)
Q Consensus 748 qRIaLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~el 827 (1300)
||++||||++++|++++||||||+||+++++.+. +++..+.+++|+|+|||+++.+..||+|++|++|+|++.|+++|+
T Consensus 484 Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~el 562 (578)
T 4a82_A 484 QRLSIARIFLNNPPILILDEATSALDLESESIIQ-EALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHREL 562 (578)
T ss_dssp HHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHH-HHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHH
T ss_conf 9999999997499999997865457999999999-999998089979998317899971998999989989998889999
Q ss_pred HHCCCHHHHHHH
Q ss_conf 812861799999
Q 000755 828 LNSGTDFMVLVG 839 (1300)
Q Consensus 828 l~~~~~~~~l~~ 839 (1300)
++.++.|.+++.
T Consensus 563 ~~~~~~~~~~~~ 574 (578)
T 4a82_A 563 IAKQGAYEHLYS 574 (578)
T ss_dssp HHTTSHHHHHHT
T ss_pred HHCCCHHHHHHH
T ss_conf 858838999998
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=644.81 Aligned_cols=549 Identities=18% Similarity=0.231 Sum_probs=442.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 03699999996999999999999999999999999999999742887520468999999999999999999999999999
Q 000755 288 FKLTKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQV 367 (1300)
Q Consensus 288 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~l~~~l~~~~~~~~~~~ 367 (1300)
.+.++.+++.+|+.+++..++.++..++..+.|++++.+++........ ...+.++..+++..++..++.....+...+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (587)
T 3qf4_A 11 SKTLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDF-SLVLKTGILMLIVALIGAVGGIGCTVFASY 89 (587)
T ss_dssp CCCGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999998736987-999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999997169900014789989999999999999999979-36799999999888899978877999999
Q 000755 368 AGIKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFGWY-MHDPWLVILQVSLALLILYKNLGLASIAA 446 (1300)
Q Consensus 368 ~g~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~~~-~~~~~~~plqi~i~l~lL~~~lG~a~l~g 446 (1300)
.+.++...++..+|+|.++++...++++++|+++|++++|++++.++... +..++..++.++.++++++..-...+++.
T Consensus 90 ~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~ 169 (587)
T 3qf4_A 90 ASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVL 169 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999788979976588899999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999999999329999984827999999999999----999999999999
Q 000755 447 LFATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRK----IEAGWLKKFLYT 522 (1300)
Q Consensus 447 l~~~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~----~E~~~l~~~~~~ 522 (1300)
+++++++.++..++.++..+..++.++..+++.+.+.|.++||++||.|+||+.+.+++.+..+ .+.+..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (587)
T 3qf4_A 170 IFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFA 249 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999985599999862149999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 79999999999899999999999983587688889999999999999999999999999999999999999745778886
Q 000755 523 GAMTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQS 602 (1300)
Q Consensus 523 ~~~~~~~~~~~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 602 (1300)
... ..+......+.+++++.+.+..+.++.|.+++++.++..+..|+..++..+..+.++.+|.+|+.++++.++..+
T Consensus 250 ~~~--~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 250 LPL--FIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHH--HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999--999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC--
Q ss_conf 322479999985309999689983499999930011168738939999847999958999997312658863799749--
Q 000755 603 DVVEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-- 680 (1300)
Q Consensus 603 ~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g-- 680 (1300)
+.....+.......|+++|++|+|+. .++++|+|+||++++|+.++|+|++|||||||+++|+|.+++.+|+|.++|
T Consensus 328 ~~~~~~~~~~~~~~i~~~~v~~~y~~-~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~ 406 (587)
T 3qf4_A 328 EADNALALPNVEGSVSFENVEFRYFE-NTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELD 406 (587)
T ss_dssp CCTTCBCCSCCCCCEEEEEEEECSSS-SSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSB
T ss_pred CCCCCCCCCCCCCCEEEEEEEEECCC-CCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 88776566888880799788998489-99764211179986998899989999979999999927866998679899998
Q ss_pred -----------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf -----------3899815886888878899842999-9999999999982525788641589864236788878978999
Q 000755 681 -----------TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 681 -----------~iayv~Q~pwi~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQkq 748 (1300)
.++||+|+|+++++||+|||.||.+ .+++++.++++.|+++++++.+|+|++|.+||+|.+|||||||
T Consensus 407 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQ 486 (587)
T 3qf4_A 407 VRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQ 486 (587)
T ss_dssp GGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHH
T ss_pred CCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHH
T ss_conf 34078999984138977898676755999985248899999999999996849999756531212751898992999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998059988998167778899899999999997602995799990598830239889999398598913868898
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 749 RIaLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~ell 828 (1300)
|++||||++++|+|++||||||+||+++++.+++ .+..+.+++|+|+|||+++.+..||+|++|++|+|++.|+++|++
T Consensus 487 rv~lARal~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 487 RLSIARALVKKPKVLILDDCTSSVDPITEKRILD-GLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHH-HHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 9999999972999999979754479999999999-999867999899982276889819989999899899978899998
Q ss_pred HCCCHHHHHHHHH
Q ss_conf 1286179999988
Q 000755 829 NSGTDFMVLVGAH 841 (1300)
Q Consensus 829 ~~~~~~~~l~~~~ 841 (1300)
+.++.|.+++..+
T Consensus 566 ~~~~~~~~~~~~~ 578 (587)
T 3qf4_A 566 EHCKPYREIYESQ 578 (587)
T ss_dssp HHCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHH
T ss_conf 6783999999998
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=643.99 Aligned_cols=544 Identities=19% Similarity=0.250 Sum_probs=457.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99996999999999999999999999999999999742887520468999999999999999999999999999999999
Q 000755 294 LFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIKMR 373 (1300)
Q Consensus 294 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~l~~~l~~~~~~~~~~~~g~~ir 373 (1300)
+++.+++.++...++.++..++..+.|++++.+++.+....... ..+.++.++++..++..++.....+...+++.++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (598)
T 3qf4_B 31 YLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFD-LLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVV 109 (598)
T ss_dssp GTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999997368889-99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999971699000147899899999999999999999-7936799999999888899978877999999999999
Q 000755 374 SVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFG-WYMHDPWLVILQVSLALLILYKNLGLASIAALFATVL 452 (1300)
Q Consensus 374 ~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~-~~~~~~~~~plqi~i~l~lL~~~lG~a~l~gl~~~ii 452 (1300)
..++..+|+|.++++...+++.++|+++|++++|++.+.+++ ..+..++..++.++.++++++....+.+++.++++++
T Consensus 110 ~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l 189 (598)
T 3qf4_B 110 FRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPL 189 (598)
T ss_dssp HHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999779999976888899999999999999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999993299999848279999999999999999999999997999999999
Q 000755 453 IMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTSFVFWG 532 (1300)
Q Consensus 453 ~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 532 (1300)
.+++...+.++..+..++..+..+++.+.+.|.++|+++||.|+||+.+.+++.+..+...+...+..............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (598)
T 3qf4_B 190 TVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNM 269 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999973799999748709999999999999999999999999999999999
Q ss_pred --HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf --989999999999998358768888999999999999999999999999999999999999974577888632247999
Q 000755 533 --APTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVVEKHPR 610 (1300)
Q Consensus 533 --~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~ 610 (1300)
....+.+++++.+.+..+.++.|.+++++.+...+..|+..++..+..+.++.++++|+.++++.++..+... ..+.
T Consensus 270 ~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~-~~~~ 348 (598)
T 3qf4_B 270 VNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPD-AVEL 348 (598)
T ss_dssp HHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCSS-CCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCC
T ss_conf 999999999999999998599789999999999999999999999999999999999999999976887777777-7777
Q ss_pred CCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC----------
Q ss_conf 9985309999689983499999930011168738939999847999958999997312658863799749----------
Q 000755 611 GSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------- 680 (1300)
Q Consensus 611 ~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g---------- 680 (1300)
......|+++|++|+|+. +.++|+|+||++++|+.++|+|++|||||||+++|+|.++|.+|+|.++|
T Consensus 349 ~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 426 (598)
T 3qf4_B 349 REVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSS 426 (598)
T ss_dssp CSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHHH
T ss_pred CCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHH
T ss_conf 777771899998997799--986012227998699889998999996999999994585799808999999830188999
Q ss_pred ---EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---3899815886888878899842999-999999999998252578864158986423678887897899999999998
Q 000755 681 ---TKAYVAQSPWIQSGNIEDNILFGKP-MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 756 (1300)
Q Consensus 681 ---~iayv~Q~pwi~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQkqRIaLARAl 756 (1300)
.++||+|+|+++++||+|||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+|||||||||+||||+
T Consensus 427 ~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAral 506 (598)
T 3qf4_B 427 LRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAF 506 (598)
T ss_dssp HHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98410899079823246399997447999999999999999697888974645323642278898799999999999999
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCCHHHH
Q ss_conf 05998899816777889989999999999760299579999059883023988999939859891386889812861799
Q 000755 757 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNSGTDFMV 836 (1300)
Q Consensus 757 y~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~ell~~~~~~~~ 836 (1300)
+++|+|++||||||+||++++..+. +++..+.+++|+|+|||+++.+..||+|++|++|+|++.|+++|+++.++.|.+
T Consensus 507 ~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 585 (598)
T 3qf4_B 507 LANPKILILDEATSNVDTKTEKSIQ-AAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYE 585 (598)
T ss_dssp HTCCSEEEECCCCTTCCHHHHHHHH-HHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHTTCHHHH
T ss_pred HCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHH
T ss_conf 6499999998976679999999999-999998089989999427789971998999989999987789999867877999
Q ss_pred HHHHHH
Q ss_conf 999889
Q 000755 837 LVGAHQ 842 (1300)
Q Consensus 837 l~~~~~ 842 (1300)
++..+.
T Consensus 586 ~~~~~~ 591 (598)
T 3qf4_B 586 LFTSQY 591 (598)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999976
No 7
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=618.40 Aligned_cols=543 Identities=17% Similarity=0.208 Sum_probs=443.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999996999999999999999999999999999999742887520468999999999999999999999999999999
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGI 370 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~l~~~l~~~~~~~~~~~~g~ 370 (1300)
++.+.+.+++.++...++.++..++..+.|++++.+++.+..... ....+.+++++++..++..++.....+...+.+.
T Consensus 16 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (582)
T 3b60_A 16 LWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTD-RSVLLWMPLVVIGLMILRGITSYISSYCISWVSG 94 (582)
T ss_dssp HHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTT-HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999998843686-5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999971699000147899899999999999999999-7936799999999888899978877999999999
Q 000755 371 KMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFG-WYMHDPWLVILQVSLALLILYKNLGLASIAALFA 449 (1300)
Q Consensus 371 ~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~-~~~~~~~~~plqi~i~l~lL~~~lG~a~l~gl~~ 449 (1300)
++...++..+|+|.++++...++++++|+++|++++|++.+.++. ..+..++..++.+++++++++..-.+.+++.+++
T Consensus 95 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 174 (582)
T 3b60_A 95 KVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVL 174 (582)
T ss_dssp HHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999809999978898658999999879999999999999999999999999999999809999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999993299999848279999999999----99999999999999799
Q 000755 450 TVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIEL----RKIEAGWLKKFLYTGAM 525 (1300)
Q Consensus 450 ~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~----R~~E~~~l~~~~~~~~~ 525 (1300)
+++..++...+.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+. ++.+.+..+........
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (582)
T 3b60_A 175 APIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPI 254 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999996199999837689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999999899999999999983587688889999999999999999999999999999999999999745778886322
Q 000755 526 TSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVV 605 (1300)
Q Consensus 526 ~~~~~~~~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 605 (1300)
..++... ..+.++.++.+.+..+.++.|.+++++.++..+..|+..++..+..+.++.++++|+.++++.++..++..
T Consensus 255 ~~~~~~~--~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~ 332 (582)
T 3b60_A 255 IQLIASL--ALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGK 332 (582)
T ss_dssp HHHHHHH--HHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCCCC
T ss_pred HHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9999999--99999999999998499989999999999999999999999999999999999999999975998766777
Q ss_pred CCCCCCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-----
Q ss_conf 479999985309999689983499999930011168738939999847999958999997312658863799749-----
Q 000755 606 EKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----- 680 (1300)
Q Consensus 606 ~~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g----- 680 (1300)
. +.......++++|++|+|+.+ ++++|+|+||++++|+.++|+|++|||||||+++|+|.++|.+|+|.++|
T Consensus 333 ~--~~~~~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~ 409 (582)
T 3b60_A 333 R--VIDRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLRE 409 (582)
T ss_dssp B--CCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTT
T ss_pred C--CCCCCCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCC
T ss_conf 7--777888847999889973999-9744156159976999899989999989999999861068989769799998230
Q ss_pred --------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf --------389981588688887889984299--9999999999998252578864158986423678887897899999
Q 000755 681 --------TKAYVAQSPWIQSGNIEDNILFGK--PMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 681 --------~iayv~Q~pwi~~gTIreNIlfG~--~~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQkqRI 750 (1300)
.++||+|+|+++++|++|||.||. ..++++++++++.++++++++.+|+|++|.+||+|.+||||||||+
T Consensus 410 ~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~qrl 489 (582)
T 3b60_A 410 YTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRI 489 (582)
T ss_dssp BCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHH
T ss_pred CCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 69999996080880687477878999985459999899999999998497999984504114511479887899999999
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHC
Q ss_conf 99999805998899816777889989999999999760299579999059883023988999939859891386889812
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 751 aLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~ell~~ 830 (1300)
+||||++++|++++||||||+||+++++.+. +.+..+.+++|+|++||+++.+..||+|++|++|++++.|+++|+++.
T Consensus 490 ~iAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 568 (582)
T 3b60_A 490 AIARALLRDSPILILDEATSALDTESERAIQ-AALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQ 568 (582)
T ss_dssp HHHHHHHHCCSEEEEETTTSSCCHHHHHHHH-HHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCCCCHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHC
T ss_conf 9999997289989997865557989999999-999999679979999454778985998999978889884589999876
Q ss_pred CCHHHHHHHH
Q ss_conf 8617999998
Q 000755 831 GTDFMVLVGA 840 (1300)
Q Consensus 831 ~~~~~~l~~~ 840 (1300)
++.|.+++..
T Consensus 569 ~~~~~~~~~~ 578 (582)
T 3b60_A 569 HGVYAQLHKM 578 (582)
T ss_dssp TSSHHHHHHH
T ss_pred CCHHHHHHHH
T ss_conf 9889999997
No 8
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=617.71 Aligned_cols=544 Identities=18% Similarity=0.220 Sum_probs=445.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999996999999999999999999999999999999742887520468999999999999999999999999999999
Q 000755 291 TKALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREFKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGI 370 (1300)
Q Consensus 291 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~~g~~l~~~l~~~~l~~~l~~~~~~~~~~~~g~ 370 (1300)
++.+.+.+++.+++..++.++..++..+.|++++.+++.+...... ...+.++.++++..++..++.....+...+.+.
T Consensus 16 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (582)
T 3b5x_A 16 LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAES-NFLRILPFMILGLMFVRGLSGFASSYCLSWVSG 94 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999889999999999999999999999999999999998646866-799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999971699000147899899999999999999999-7936799999999888899978877999999999
Q 000755 371 KMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFG-WYMHDPWLVILQVSLALLILYKNLGLASIAALFA 449 (1300)
Q Consensus 371 ~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~-~~~~~~~~~plqi~i~l~lL~~~lG~a~l~gl~~ 449 (1300)
++...++..+|+|.++++...++++++|+++|++++|++.+.++. ..+..++..++.+++++++++..-.+.+++.+++
T Consensus 95 ~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 174 (582)
T 3b5x_A 95 NVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVV 174 (582)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999869999977898789999999889999999999999999999999999999999829999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999993299999848279999999999----99999999999999799
Q 000755 450 TVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIEL----RKIEAGWLKKFLYTGAM 525 (1300)
Q Consensus 450 ~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~----R~~E~~~l~~~~~~~~~ 525 (1300)
+++.+++...+.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+. ++.+.+..+........
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (582)
T 3b5x_A 175 APVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPV 254 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999995199999708759999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999999899999999999983587688889999999999999999999999999999999999999745778886322
Q 000755 526 TSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDVV 605 (1300)
Q Consensus 526 ~~~~~~~~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 605 (1300)
..++... ..+.++.++.+.+..+.++.|.+++++.++..+..|+..++..+..+.++.++++|+.++++.++..++..
T Consensus 255 ~~~~~~~--~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~ 332 (582)
T 3b5x_A 255 IQMIASL--ALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGK 332 (582)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9999999--99999999999998599889999999999999999999999999999999999999999975897677777
Q ss_pred CCCCCCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-----
Q ss_conf 479999985309999689983499999930011168738939999847999958999997312658863799749-----
Q 000755 606 EKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----- 680 (1300)
Q Consensus 606 ~~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g----- 680 (1300)
.+.......++++|++|+|+.+ ++++|+|+||++++|+.++|+|++|||||||+++|+|.++|.+|+|.++|
T Consensus 333 --~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~ 409 (582)
T 3b5x_A 333 --YEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRD 409 (582)
T ss_pred --CCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHH
T ss_conf --7777788828999989972899-8654004169987999899989999979999999965778999879899998563
Q ss_pred --------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf --------389981588688887889984299--9999999999998252578864158986423678887897899999
Q 000755 681 --------TKAYVAQSPWIQSGNIEDNILFGK--PMDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 750 (1300)
Q Consensus 681 --------~iayv~Q~pwi~~gTIreNIlfG~--~~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQkqRI 750 (1300)
.++||+|+|+++++|++|||.+|. ..++++++++++.++++++++.+|+|++|.+||+|.+||||||||+
T Consensus 410 ~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~qr~ 489 (582)
T 3b5x_A 410 YKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRV 489 (582)
T ss_pred CCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHH
T ss_conf 88999964858982799053102999985668899999999999998798999984765334510688884799999999
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHC
Q ss_conf 99999805998899816777889989999999999760299579999059883023988999939859891386889812
Q 000755 751 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDILNS 830 (1300)
Q Consensus 751 aLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~ell~~ 830 (1300)
+||||++++|++++||||||+||+++++.+. +.+..+.+++|+|++||+++.+..||+|++|++|++++.|+++|+++.
T Consensus 490 ~iAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 568 (582)
T 3b5x_A 490 AIARALLRDAPVLILDEATSALDTESERAIQ-AALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQ 568 (582)
T ss_pred HHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHC
T ss_conf 9999997499999997854468999999999-999997289989999368899981998999989989997789999848
Q ss_pred CCHHHHHHHHH
Q ss_conf 86179999988
Q 000755 831 GTDFMVLVGAH 841 (1300)
Q Consensus 831 ~~~~~~l~~~~ 841 (1300)
.+.|.+++..+
T Consensus 569 ~~~~~~~~~~q 579 (582)
T 3b5x_A 569 DGAYAQLHRIQ 579 (582)
T ss_pred CCHHHHHHHHH
T ss_conf 85899999986
No 9
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=617.27 Aligned_cols=547 Identities=22% Similarity=0.262 Sum_probs=438.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999969999999999999999999999999999997428875--2046899999999999999999999999999999
Q 000755 292 KALFFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGERE--FKNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAG 369 (1300)
Q Consensus 292 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~--~~~~g~~l~~~l~~~~l~~~l~~~~~~~~~~~~g 369 (1300)
+.+.+.+++.++...++.++..++..+.|++++.+++.+..... .....+.++.++++..++..++.....+...+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (595)
T 2yl4_A 11 LGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSG 90 (595)
T ss_dssp HHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988789999999999999999999999999999999973574026679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999971699000147899899999999999999999-793679999999988889997887799999999
Q 000755 370 IKMRSVLVSMVYNKGLTLSCQAKQSYTSGEIINFMTVDAERIGDFG-WYMHDPWLVILQVSLALLILYKNLGLASIAALF 448 (1300)
Q Consensus 370 ~~ir~~L~~~Iy~K~L~ls~~~~~~~~~G~Iinlis~D~~~i~~~~-~~~~~~~~~plqi~i~l~lL~~~lG~a~l~gl~ 448 (1300)
.++...++..+|+|.++++...++++++|+++|++++|++.+.++. ..+..++..++.+++++++++..-.+.+++.++
T Consensus 91 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 170 (595)
T 2yl4_A 91 QRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLS 170 (595)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999981999997779848899999999999999999999999999999999999999981999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999993299999848279999999999----9999999999999979
Q 000755 449 ATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIEL----RKIEAGWLKKFLYTGA 524 (1300)
Q Consensus 449 ~~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~----R~~E~~~l~~~~~~~~ 524 (1300)
++++..++...+.++..+..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+. ++.+.+..+.......
T Consensus 171 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (595)
T 2yl4_A 171 VVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFG 250 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999998119999983756999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999989999999999998358768888999999999999999999999999999999999999974577888632
Q 000755 525 MTSFVFWGAPTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV 604 (1300)
Q Consensus 525 ~~~~~~~~~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~ 604 (1300)
...+ ......+.++.++.+.+..+.++.|.+++++.+...+..|+..++..+..+.++.++++|+.++++.++..++.
T Consensus 251 ~~~~--~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 328 (595)
T 2yl4_A 251 ATGL--SGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFN 328 (595)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSS
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999--99999999999999999869978999999999999999999999999999999999999999998389766777
Q ss_pred CCCCCCCCCCCE-EEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC---
Q ss_conf 247999998530-9999689983499999930011168738939999847999958999997312658863799749---
Q 000755 605 VEKHPRGSSETA-IEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--- 680 (1300)
Q Consensus 605 ~~~~~~~~~~~~-I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g--- 680 (1300)
....+....... |+++|++|+|+...+.++|+|+||++++|+.++|+|++|||||||+++|+|.++|.+|+|.++|
T Consensus 329 ~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i 408 (595)
T 2yl4_A 329 EGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDI 408 (595)
T ss_dssp CSBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEET
T ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEH
T ss_conf 78777767899838999889985899888120112799849988999899999799999998258578983799999981
Q ss_pred ----------EEEEEECCCCCCCCCHHHHHHCCCC----CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf ----------3899815886888878899842999----99999999999825257886415898642367888789789
Q 000755 681 ----------TKAYVAQSPWIQSGNIEDNILFGKP----MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQ 746 (1300)
Q Consensus 681 ----------~iayv~Q~pwi~~gTIreNIlfG~~----~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQ 746 (1300)
.++||+|+|+++++|++|||.||.+ .++++++++++.++++++++.+|+|++|.+||+|.+|||||
T Consensus 409 ~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq 488 (595)
T 2yl4_A 409 RQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQ 488 (595)
T ss_dssp TTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHH
T ss_pred HHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 11799999732289836883268779999840587766568999999999869799997473201350168878689999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHH
Q ss_conf 99999999980599889981677788998999999999976029957999905988302398899993985989138688
Q 000755 747 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYND 826 (1300)
Q Consensus 747 kqRIaLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~e 826 (1300)
|||++||||++++|++++||||||+||+++++.+. +.+..+.+++|+|++||+++.+..||+|++|++|+|++.|+++|
T Consensus 489 ~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 567 (595)
T 2yl4_A 489 KQRIAIARALLKNPKILLLDEATSALDAENEYLVQ-EALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEE 567 (595)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHH-HHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHH
T ss_conf 99999999997599999998866689989999999-99999965997999946878997599899998998999788999
Q ss_pred HHHC-CCHHHHHHHHH
Q ss_conf 9812-86179999988
Q 000755 827 ILNS-GTDFMVLVGAH 841 (1300)
Q Consensus 827 ll~~-~~~~~~l~~~~ 841 (1300)
+++. +..|.+++..+
T Consensus 568 l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 568 LLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp ------C---------
T ss_pred HHHCCCHHHHHHHHHH
T ss_conf 9747872999999974
No 10
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=570.28 Aligned_cols=546 Identities=19% Similarity=0.229 Sum_probs=414.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999699999999999999999999999999999974288752---04689999999999999999999999999999999
Q 000755 295 FFSAWKEIVFTAILALLYTLANYVGPYLIDTFVQYLNGEREF---KNEGYVLVSTFFVAKIVECLAQRHWMFRLQVAGIK 371 (1300)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~---~~~g~~l~~~l~~~~l~~~l~~~~~~~~~~~~g~~ 371 (1300)
.+..|+.+++..++.++..++..+.|+++..+++........ ......++..+++..++..+......+...+.+.+
T Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~ 779 (1284)
T 3g5u_A 700 NSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEI 779 (1284)
T ss_dssp HHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45157999999999999999999999999999999855685033677999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHC--CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 9999999999997169900014--78998999999999999999997-93679999999988889997-88779999999
Q 000755 372 MRSVLVSMVYNKGLTLSCQAKQ--SYTSGEIINFMTVDAERIGDFGW-YMHDPWLVILQVSLALLILY-KNLGLASIAAL 447 (1300)
Q Consensus 372 ir~~L~~~Iy~K~L~ls~~~~~--~~~~G~Iinlis~D~~~i~~~~~-~~~~~~~~plqi~i~l~lL~-~~lG~a~l~gl 447 (1300)
+...++..+|+|.++.+...++ ++++|+++|++++|++.+.++.. .+..+....+.++.++++++ ..+.+ +++.+
T Consensus 780 ~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l-~lv~l 858 (1284)
T 3g5u_A 780 LTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQL-TLLLL 858 (1284)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSS-HHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf 99999999999998399888757899889999999999999999999999999999999999999999996999-99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999932999998482799999999999999999999999979999
Q 000755 448 FATVLIMLTNFPLGRLQENFQDKLMGSKDKRMKVTSEILRNMRILKLQGWEMKFLSKIIELRKIEAGWLKKFLYTGAMTS 527 (1300)
Q Consensus 448 ~~~ii~~~~~~~~~k~~~~~q~~~~~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 527 (1300)
+++++++.+.....+...+...+..+..++..+...|.++|+++||.+++|+.+.++..+..+...+...+.........
T Consensus 859 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1284)
T 3g5u_A 859 AIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITF 938 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999988999998465999999999999999999999999999999
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf 99999--989999999999998358768888999999999999999999999999999999999999974577888632-
Q 000755 528 FVFWG--APTFVSVATFGACMLLGIPLESGKILSALATFRILQEPIYNLPDTISMIIQTKVSLDRIASFLCLDDLQSDV- 604 (1300)
Q Consensus 528 ~~~~~--~p~~v~~~tf~~~~~~~~~Lt~~~vft~lalf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~- 604 (1300)
.+... ....+...+++.+.+..+.++.+.++.++.++.....|+..+...+..+.++..+.+|+.++++.++..+..
T Consensus 939 ~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~ 1018 (1284)
T 3g5u_A 939 SFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYS 1018 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999999999999999999098069999999999999999999999999999999999999999983887666655
Q ss_pred CCCCCCCCCCCEEEEEEEEEEECCCCCCCCEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC----
Q ss_conf 2479999985309999689983499999930011168738939999847999958999997312658863799749----
Q 000755 605 VEKHPRGSSETAIEIVDGNFAWDISSNNPTLRDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---- 680 (1300)
Q Consensus 605 ~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKSTLL~~ilGe~~~~~G~I~v~g---- 680 (1300)
....+.....+.++++|++|+|+...+.++|+|+||++++||.++|+|++|||||||+++|.|.++|.+|+|.++|
T Consensus 1019 ~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~ 1098 (1284)
T 3g5u_A 1019 TQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIK 1098 (1284)
T ss_dssp SSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTT
T ss_pred CCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECC
T ss_conf 56654567778579999899779999870020305997699889998899997899999994686789977989999800
Q ss_pred ---------EEEEEECCCCCCCCCHHHHHHCCCC---CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ---------3899815886888878899842999---9999999999982525788641589864236788878978999
Q 000755 681 ---------TKAYVAQSPWIQSGNIEDNILFGKP---MDREKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 748 (1300)
Q Consensus 681 ---------~iayv~Q~pwi~~gTIreNIlfG~~---~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGe~G~~LSGGQkq 748 (1300)
.++||||+|.++++||+|||.+|.+ .++++..++++.+.+++.++.+|+|++|.+||+|.+|||||||
T Consensus 1099 ~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Q 1178 (1284)
T 3g5u_A 1099 QLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQ 1178 (1284)
T ss_dssp SSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHH
T ss_pred CCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 07899997026898778740666699997466877899999999999983959999727042456117888933899999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998059988998167778899899999999997602995799990598830239889999398598913868898
Q 000755 749 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDIL 828 (1300)
Q Consensus 749 RIaLARAly~~a~IllLDdp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~l~~l~~aD~Ilvl~~G~I~~~G~~~ell 828 (1300)
||+||||++++|+|++||||||+||..+++.+. +.+....+++|+|+|||+++.+..||+|++|++|+|++.|++++++
T Consensus 1179 rv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~-~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~ 1257 (1284)
T 3g5u_A 1179 RIAIARALVRQPHILLLDEATSALDTESEKVVQ-EALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLL 1257 (1284)
T ss_dssp HHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHH-HHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHH
T ss_conf 999999997499999986875557999999999-9999867999899995587999809989999899899977899998
Q ss_pred HCCCHHHHHHHHHH
Q ss_conf 12861799999889
Q 000755 829 NSGTDFMVLVGAHQ 842 (1300)
Q Consensus 829 ~~~~~~~~l~~~~~ 842 (1300)
+.++.|.+++..+.
T Consensus 1258 ~~~g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1258 AQKGIYFSMVSVQA 1271 (1284)
T ss_dssp HSCSHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHH
T ss_conf 47777999999976
Done!