BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000767
(1294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56941|NPC1_PIG Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1
Length = 1277
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/1287 (36%), Positives = 712/1287 (55%), Gaps = 109/1287 (8%)
Query: 46 VKHVEEFCAMYDICGARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTIT-GNV--CCTE 102
V+ + C Y CG S K NC Y+ P + VQ LCP GNV CC
Sbjct: 18 VQVFSQSCVWYGECGIASGDKRYNCRYSGPPKPLPEDGYDLVQELCPGFFFGNVSLCCDV 77
Query: 103 DQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL 158
Q TL+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V V+N
Sbjct: 78 QQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQFLNVTATEDYVDPVTNQT 137
Query: 159 --TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG---GAQNFKDWFAFIGRRA 213
V ++YY+ +TF +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 138 KTNVKELEYYVGETFANAMYNACRDVEAPSSNEKALGLLCGREAQACNATNWIEYMFNKD 197
Query: 214 AANLPGSPYTIKFWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAP 269
+P+TI S GM PMN + C D G CSC DC S VC
Sbjct: 198 NGQ---APFTITPIFSDLPTHGMEPMNNATKGCDESVDEVTGPCSCQDC--SIVCGPKPQ 252
Query: 270 PPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAM 329
PP + L + + Y+ + +FFG FF R R F + +
Sbjct: 253 PPPPPVPWRI----LGLDAMYVIMWSSYMAFLIVFFG-AFFAVWCYRKRYFVSE--YTPI 305
Query: 330 DGSELHSVER-QKEENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVLS 388
DG+ SV K + LG R + + ++G + R+P V+
Sbjct: 306 DGNIAFSVNSSDKGQAFCCDPLGAAFERG----------LRRLFAQWGAFCVRHPGCVVF 355
Query: 389 LSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPD 448
S+A ++ GL+ V T P LW PGS+A EK +FD+H PF+R+E+LI+ +
Sbjct: 356 FSLAFIVACSSGLVFIRVTTDPVDLWSAPGSQARREKEYFDTHFGPFFRMEQLIIRATNN 415
Query: 449 TTHGNLP----------SIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPL--- 495
+H P ++ + + ++Q I+ + A+Y+ ++L DIC+ PL
Sbjct: 416 QSHIYHPYPAGADVPFGPPLSRDILHQVLDLQTAIENITASYNNETVTLQDICLAPLSPY 475
Query: 496 GQDCATQSVLQYFKMDPKNFD----DFGGV-----EHVKYCFQHYTS-------TESCMS 539
++C SVL YF+ D DF V H YC + S + C+
Sbjct: 476 NKNCTILSVLNYFQNSHSVLDHQVGDFFFVYADYHTHFLYCVRAPASLNDASLLHDPCLG 535
Query: 540 AFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDE 599
F GP+ P LGG+ NY+ A+A V+T+PVNN + + + ++A AWE F+ K+
Sbjct: 536 TFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYN-DTEKLQRAQAWESEFINFVKN- 593
Query: 600 LLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFY 659
++ NLT++F +E SIE+EL RES +D TI+ISY +MF YIS+ LG S
Sbjct: 594 ----YKNPNLTISFMAERSIEDELNRESNSDLFTILISYAIMFLYISIALGHIKSCSRLL 649
Query: 660 ISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAV 719
+ SK+ LG++G+++V+ SV S+G FS IGV TLI++EVIPFLVLAVGVDN+ ILV
Sbjct: 650 VDSKISLGIAGILIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVLAVGVDNIFILVQTY 709
Query: 720 KR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVL 777
+R ++L+ L+ ++ L EV PS+ L+S SE +AF +G +PA FS+FA +AVL
Sbjct: 710 QRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSVVPAVHTFSLFAGMAVL 769
Query: 778 LDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKPGLLARYMKE 836
+DFLLQIT FV+L+ D R E R+D + C++ ++ G G Q L R+ K
Sbjct: 770 IDFLLQITCFVSLLGLDIKRQEKNRLDVVCCVQ------GAEDGAGVQASESCLFRFFKN 823
Query: 837 VHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHL 896
+A +L ++ VI++FV SIA+ ++E GL+Q + +P DSY+ YF ++S +L
Sbjct: 824 SYAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSRYL 883
Query: 897 RIGPPLYFVV-KNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASW 955
GPP+YFVV + +NY+S Q N +C C+++SL+ +I A+ + + I +SW
Sbjct: 884 HAGPPVYFVVEEGHNYTSLKGQ-NMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPSSW 942
Query: 956 LDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCFHHSDLL 1015
+DD+ WI P++ CCR + S C ++ V C C +
Sbjct: 943 IDDYFDWIKPQS-SCCRVYN---------------STDQFCNASVVDPTCIRCRPLTSEG 986
Query: 1016 KDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLN 1075
K RP F LP FL+ P+ C KGGH AY+++V++ G +G V A+ F TYHT L
Sbjct: 987 KQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSG-VGATYFMTYHTVLQ 1045
Query: 1076 RQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAI 1130
D++++M+ AR +S ++ ++ +E +FPYSVFY+++EQYL + + NL +++
Sbjct: 1046 ASADFIDAMQKARLIASNITRTMGLEASSYRVFPYSVFYVFYEQYLTVIDDTIFNLGVSL 1105
Query: 1131 GAVFVVCLI-TTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVE 1189
GA+F+V ++ C W++ I+ + + MI+V++ GVM + I LNAVS+VNLVM+ GI+VE
Sbjct: 1106 GAIFLVTVVLMGCELWATVIMCVTIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVE 1165
Query: 1190 FCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYF 1248
FC HIT AF++S+ G + R +EAL MG+SVFSGITLTK G++VL F+++++F ++YF
Sbjct: 1166 FCSHITRAFTLSTKGSRVDRAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYF 1225
Query: 1249 QMYLALVLLGFLHGLVFLPVVLSVFGP 1275
+MYLA+VLLG HGL+FLPV+LS GP
Sbjct: 1226 RMYLAIVLLGATHGLIFLPVLLSYIGP 1252
>sp|O35604|NPC1_MOUSE Niemann-Pick C1 protein OS=Mus musculus GN=Npc1 PE=1 SV=2
Length = 1277
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/1287 (35%), Positives = 708/1287 (55%), Gaps = 123/1287 (9%)
Query: 53 CAMYDICGARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTI---TGNVCCTEDQFDTLR 109
C Y CG + K NC Y+ P VQ LCP + ++CC Q TL+
Sbjct: 25 CVWYGECGIATGDKRYNCKYSGPPKPLPKDGYDLVQELCPGLFFDNVSLCCDIQQLQTLK 84
Query: 110 TQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKV------SNNLTVDGI 163
+ +Q + FL CP+C N + LFCELTCSP+QS F+NVT+ N V +
Sbjct: 85 SNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQFLNVTATEDYFDPKTQENKTNVKEL 144
Query: 164 DYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGG---AQNFKDWFAFIGRRAAANLPGS 220
+Y++ +F +Y +C+DV+ + N +AL + G A N +W ++ + +
Sbjct: 145 EYFVGQSFANAMYNACRDVEAPSSNEKALGLLCGRDARACNATNWIEYMFNKDNGQ---A 201
Query: 221 PYTIKFWPSAPELS--GMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKS 274
P+TI P +LS GM PM + C D G CSC DC S VC
Sbjct: 202 PFTII--PVFSDLSILGMEPMRNATKGCNESVDEVTGPCSCQDC--SIVCGPKPQ--PPP 255
Query: 275 SSCSVKMGSLNAKCVDFALAILYIILVSLFFG-----WGFFHRKRERSRSFRMKPLVNAM 329
++ L+A V + + Y+ + +FFG W HR+R + +
Sbjct: 256 PPMPWRIWGLDAMYV--IMWVTYVAFLFVFFGALLAVWC--HRRRYFVSEY------TPI 305
Query: 330 DGSELHSVER-QKEENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVLS 388
D + SV K E LG + + + K+G + RNPT ++
Sbjct: 306 DSNIAFSVNSSDKGEASCCDPLG----------AAFDDCLRRMFTKWGAFCVRNPTCIIF 355
Query: 389 LSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPD 448
S+A + + GL+ +V T P +LW P S+A EK +FD H PF+R E+LI+
Sbjct: 356 FSLAFITVCSSGLVFVQVTTNPVELWSAPHSQARLEKEYFDKHFGPFFRTEQLIIQAPNT 415
Query: 449 TTH--------GNLP--SIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPL--- 495
+ H ++P + + + + ++Q I+ + A+Y+ ++L DIC+ PL
Sbjct: 416 SVHIYEPYPAGADVPFGPPLNKEILHQVLDLQIAIESITASYNNETVTLQDICVAPLSPY 475
Query: 496 GQDCATQSVLQYFK-----MDPKNFDDF----GGVEHVKYCFQHYTSTES-------CMS 539
++C SVL YF+ +D + DDF H YC + S C+
Sbjct: 476 NKNCTIMSVLNYFQNSHAVLDSQVGDDFYIYADYHTHFLYCVRAPASLNDTSLLHGPCLG 535
Query: 540 AFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDE 599
F GP+ P LGG+ NY+ A+A V+T+PVNN + + ++A AWEK F+ K+
Sbjct: 536 TFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYN-DTERLQRAWAWEKEFISFVKN- 593
Query: 600 LLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFY 659
++ NLT++F++E SIE+EL RES +D T++ISY+VMF YISL LG S
Sbjct: 594 ----YKNPNLTISFTAERSIEDELNRESNSDVFTVIISYVVMFLYISLALGHIQSCSRLL 649
Query: 660 ISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAV 719
+ SK+ LG++G+++V+ SV S+G FS +G+ TLI++EVIPFLVLAVGVDN+ ILV
Sbjct: 650 VDSKISLGIAGILIVLSSVACSLGIFSYMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTY 709
Query: 720 KRQQL--ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVL 777
+R + E L+ ++ L EV P++ L+S SE AF G+ MPA FS+FA +AVL
Sbjct: 710 QRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVHTFSLFAGMAVL 769
Query: 778 LDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQR-KPGLLARYMKE 836
+DFLLQIT FV+L+ D R E +D + C++ +D G G L R+ K
Sbjct: 770 IDFLLQITCFVSLLGLDIKRQEKNHLDILCCVR------GADDGQGSHASESYLFRFFKN 823
Query: 837 VHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHL 896
A +L ++ V+++FV S+A+ +++ GL+Q + +P DSY+ YF +++++L
Sbjct: 824 YFAPLLLKDWLRPIVVAVFVGVLSFSVAVVNKVDIGLDQSLSMPNDSYVIDYFKSLAQYL 883
Query: 897 RIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASW 955
GPP+YFV++ YNYSS Q N +C CD++SL+ +I A+ + + + +SW
Sbjct: 884 HSGPPVYFVLEEGYNYSSRKGQ-NMVCGGMGCDNDSLVQQIFNAAELDTYTRVGFAPSSW 942
Query: 956 LDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCFHHSDLL 1015
+DD+ W+SP++ CCR + C ++ + C C +
Sbjct: 943 IDDYFDWVSPQS-SCCRLYN---------------VTHQFCNASVMDPTCVRCRPLTPEG 986
Query: 1016 KDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLN 1075
K RP +F + LP FL+ P+ C KGGH AY ++V++ G ++ + A+ F TYHT L
Sbjct: 987 KQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYGSAVNIVG-DDTYIGATYFMTYHTILK 1045
Query: 1076 RQIDYVNSMRAAREFSSRVSDSLQ-----MEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1130
DY ++M+ AR +S ++++++ +FPYSVFY+++EQYL I + NL++++
Sbjct: 1046 TSADYTDAMKKARLIASNITETMRSKGSDYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSL 1105
Query: 1131 GAVFVVCLIT-TCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVE 1189
G++F+V L+ C WS+ I+ + + MI+V++ GVM + I LNAVS+VNLVM+ GI+VE
Sbjct: 1106 GSIFLVTLVVLGCELWSAVIMCITIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVE 1165
Query: 1190 FCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYF 1248
FC HIT AF++S+ G + R +EAL MG+SVFSGITLTK G++VL F+++++F ++YF
Sbjct: 1166 FCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFEIFYF 1225
Query: 1249 QMYLALVLLGFLHGLVFLPVVLSVFGP 1275
+MYLA+VLLG HGL+FLPV+LS GP
Sbjct: 1226 RMYLAMVLLGATHGLIFLPVLLSYIGP 1252
>sp|O15118|NPC1_HUMAN Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2
Length = 1278
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1305 (36%), Positives = 699/1305 (53%), Gaps = 132/1305 (10%)
Query: 53 CAMYDICGARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTLR 109
C Y CG K NC Y+ P VQ LCP GNV CC Q TL+
Sbjct: 25 CVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVRQLQTLK 84
Query: 110 TQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDGI 163
+Q + FL CP+C N LNLFCELTCSP QS F+NVT+ V V+N V +
Sbjct: 85 DNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKEL 144
Query: 164 DYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG---GAQNFKDWFAFIGRRAAANLPGS 220
YY+ +F +Y +C+DV+ + N +AL + G A N +W ++ + +
Sbjct: 145 QYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGKDADACNATNWIEYMFNKDNGQ---A 201
Query: 221 PYTIKFWPSAPELSGMIPMNVSAYSCADG----SLGCSCGDCTSSPVCSSTAPPPHKSSS 276
P+TI S + GM PMN + C + + CSC DC S VC PP +
Sbjct: 202 PFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSCQDC--SIVCGPKPQPPPPPAP 259
Query: 277 CSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSF--RMKPL-------VN 327
++ L + + I Y+ + +FFG FF R R F P+ VN
Sbjct: 260 WTI----LGLDAMYVIMWITYMAFLLVFFG-AFFAVWCYRKRYFVSEYTPIDSNIAFSVN 314
Query: 328 AMDGSELHSVERQKEENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVL 387
A D E + P+ + +G + + ++G + RNP V+
Sbjct: 315 ASDKGEASCCD-------PVS-------------AAFEGCLRRLFTRWGSFCVRNPGCVI 354
Query: 388 SLSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIP 447
S+ + GL+ V T P LW P S+A EK +FD H PF+R E+LI+
Sbjct: 355 FFSLVFITACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDQHFGPFFRTEQLIIRAPL 414
Query: 448 DTTHGNLPSIVTES-------NIKLLFEI---QKKIDGLRANYSGSMISLTDICMKPL-- 495
H P +I++L ++ Q I+ + A+Y ++L DIC+ PL
Sbjct: 415 TDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYDNETVTLQDICLAPLSP 474
Query: 496 -GQDCATQSVLQYFK-----MDPKNFDDF----GGVEHVKYCFQHYTS-------TESCM 538
+C SVL YF+ +D K DDF H YC + S + C+
Sbjct: 475 YNTNCTILSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCL 534
Query: 539 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 598
F GP+ P LGG+ NY+ A+A V+T+PVNN + + + ++A AWEK F+ K+
Sbjct: 535 GTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYN-DTEKLQRAQAWEKEFINFVKN 593
Query: 599 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 658
++ NLT++F++E SIE+EL RES +D T+VISY +MF YISL LG
Sbjct: 594 -----YKNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRL 648
Query: 659 YISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 718
+ SKV LG++G+++V+ SV S+G FS IG+ TLI++EVIPFLVLAVGVDN+ ILV A
Sbjct: 649 LVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQA 708
Query: 719 VKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAV 776
+R ++L+ L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+FA LAV
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAV 768
Query: 777 LLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKE 836
+DFLLQIT FV+L+ D R E R+D C++ D Q L R+ K
Sbjct: 769 FIDFLLQITCFVSLLGLDIKRQEKNRLDIFCCVR-----GAEDGTSVQASESCLFRFFKN 823
Query: 837 VHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHL 896
++ +L ++ VI++FV SIA+ +++ GL+Q + +P DSY+ YF +IS++L
Sbjct: 824 SYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYL 883
Query: 897 RIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWL 956
GPP+YFV++ + + S+ N +C C+++SL+ +I A+ + + I +SW+
Sbjct: 884 HAGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWI 943
Query: 957 DDFLVWISPEAFGCCR------KFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCFH 1010
DD+ W+ P++ CCR +F N S P C C
Sbjct: 944 DDYFDWVKPQS-SCCRVDNITDQFCNASVVDP---------------------ACVRCRP 981
Query: 1011 HSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTY 1070
+ K RP F LP FL+ P+ C KGGH AY+++V++ V A+ F TY
Sbjct: 982 LTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTY 1041
Query: 1071 HTPLNRQIDYVNSMRAAREFSSRVSDSLQM-----EIFPYSVFYMYFEQYLDIWRTALIN 1125
HT L D++++++ AR +S V++++ + +FPYSVFY+++EQYL I + N
Sbjct: 1042 HTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFN 1101
Query: 1126 LAIAIGAVFVVCLI-TTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAV 1184
L +++GA+F+V ++ C WS+ I+ + M++V++ GVM + I LNAVS+VNLVM+
Sbjct: 1102 LGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSC 1161
Query: 1185 GIAVEFCVHITHAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVF 1243
GI+VEFC HIT AF+VS G + +R +EAL MG+SVFSGITLTK G++VL F+++++F
Sbjct: 1162 GISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIF 1221
Query: 1244 VVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPSRCMLVERQEER 1288
++YF+MYLA+VLLG HGL+FLPV+LS GP EER
Sbjct: 1222 QIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKSCATEER 1266
>sp|Q6T3U3|NPCL1_RAT Niemann-Pick C1-like protein 1 OS=Rattus norvegicus GN=Npc1l1 PE=1
SV=1
Length = 1331
Score = 613 bits (1581), Expect = e-174, Method: Compositional matrix adjust.
Identities = 451/1318 (34%), Positives = 675/1318 (51%), Gaps = 140/1318 (10%)
Query: 47 KHVEEFCAMYDICGARSDRK-------VLNCPYNIPSVKPDDLLSSKVQSLCPTI----- 94
KH C Y+ CG + ++C N P+ + +Q +CP +
Sbjct: 26 KHEAGVCTFYEECGKNPELSGGLTSLSNVSCLSNTPARHVTGEHLALLQRICPRLYNGPN 85
Query: 95 TGNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSK- 153
T CC+ Q +L + + L CPAC NF++L C TCSP+QSLFINVT V +
Sbjct: 86 TTFACCSTKQLLSLESSMSITKALLTRCPACSDNFVSLHCHNTCSPDQSLFINVTRVVER 145
Query: 154 -VSNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFI----GGGAQNFKDWFAF 208
V + + +F + YESC V+ + A+ + G N + W F
Sbjct: 146 GAGEPPAVVAYEAFYQRSFAEKAYESCSQVRIPAAASLAVGSMCGVYGSALCNAQRWLNF 205
Query: 209 IGRRAAANLPGSPYTIKFW---PSAPELSGMIPMNVSAYSC----ADGSLGCSCGDCTSS 261
G +P I F P G+ P+N C D S CSC DC +S
Sbjct: 206 QGDTGNGL---APLDITFHLLEPGQALPDGIQPLNGKIAPCNESQGDDSAVCSCQDCAAS 262
Query: 262 -PVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSF 320
PV PP ++ S MG + AL I++ + L R R S
Sbjct: 263 CPVI-----PPPEALRPSFYMGRMPGW---LALIIIFTAVFVLLSAV----LVRLRVVSN 310
Query: 321 RMKPLVNAMDGSELHSVERQKEENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVA 380
R K N +G Q+ LP + +P T + F++ +G VA
Sbjct: 311 RNK---NKAEGP-------QEAPKLPHKHKLSPHT-----------ILGRFFQNWGTRVA 349
Query: 381 RNPTLVLSLSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEE 440
P VL+LS +V+ L GL E+ T P +LW P S+A +EK F D H PF+R +
Sbjct: 350 SWPLTVLALSFIVVIALAAGLTFIELTTDPVELWSAPKSQARKEKSFHDEHFGPFFRTNQ 409
Query: 441 LILATIPDTTHG---------NLPSIVTESNIKLLFEIQKKIDGLR--ANYSGSMISLTD 489
+ + +++ N I++ + L E+Q+++ L+ + + ISL D
Sbjct: 410 IFVTARNRSSYKYDSLLLGSKNFSGILSLDFLLELLELQERLRHLQVWSPEAERNISLQD 469
Query: 490 ICMKPLG------QDCATQSVLQYFK------MDPKNFDDFGGV------EHVKYC---- 527
IC PL DC S+LQYF+ M N G +H YC
Sbjct: 470 ICYAPLNPYNTSLSDCCVNSLLQYFQNNRTLLMLTANQTLNGQTSLVDWKDHFLYCANAP 529
Query: 528 --FQHYTSTE-SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKK 584
F+ TS SCM+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +
Sbjct: 530 LTFKDGTSLALSCMADYGAPVFPFLAVGGYQGTDYSEAEALIITFSLNN-YPADDPRMAQ 588
Query: 585 AVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAY 644
A WE+AF L + E S +AFS+E S+E+E+ R + D +SY+++F Y
Sbjct: 589 AKLWEEAF--LKEMESFQRNTSDKFQVAFSAERSLEDEINRTTIQDLPVFAVSYIIVFLY 646
Query: 645 ISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLV 704
ISL LG S + SK LGL GV++V+ +VL ++GF+S +GV S+L+I++V+PFLV
Sbjct: 647 ISLALGSYSRCSRVAVESKATLGLGGVIVVLGAVLAAMGFYSYLGVPSSLVIIQVVPFLV 706
Query: 705 LAVGVDNMCILVHAVKRQQLELPLETR---ISNALVEVGPSITLASLSEVLAFAVGSFIP 761
LAVG DN+ I V +R +P E R I L V PS+ L SLSE + F +G+ P
Sbjct: 707 LAVGADNIFIFVLEYQRLP-RMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGALTP 765
Query: 762 MPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKG 821
MPA R F++ + LA++LDFLLQ+TAFVAL+ D R E R D + C ++
Sbjct: 766 MPAVRTFALTSGLAIILDFLLQMTAFVALLSLDSKRQEASRPDVLCC------FSTRKLP 819
Query: 822 IGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 881
+ K GLL R+ ++++A L ++ V+ LF+ A++ L I GL+Q++ LP+
Sbjct: 820 PPKEKEGLLLRFFRKIYAPFLLHRFIRPVVMLLFLTLFGANLYLMCNINVGLDQELALPK 879
Query: 882 DSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRAS 940
DSYL YF ++ +L +GPP+YFV + +N+SSE+ N CS + C S SL +I AS
Sbjct: 880 DSYLIDYFLFLNRYLEVGPPVYFVTTSGFNFSSEA-GMNATCSSAGCKSFSLTQKIQYAS 938
Query: 941 LIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAG 1000
P SY+A A+SW+DDF+ W++P + CCR + G P D+ CPS +S
Sbjct: 939 EFPDQSYVAIAASSWVDDFIDWLTPSS-SCCRLYIRG---PHKDE--FCPSTDTSFNCLK 992
Query: 1001 VCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENG 1060
C + T L RP+ QF + LPWFLN P+ C KGG AY SV+L +G
Sbjct: 993 NCMNRT-------LGPVRPTAEQFHKYLPWFLNDPPNIRCPKGGLAAYRTSVNLS--SDG 1043
Query: 1061 IVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYF 1112
V AS F YH PL D+ ++RA+R ++ ++ L+ E+FPY++ +++
Sbjct: 1044 QVIASQFMAYHKPLRNSQDFTEALRASRLLAANITADLRKVPGTDPNFEVFPYTISNVFY 1103
Query: 1113 EQYLDIWRTALINLAIAIGAVFVVC-LITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQ 1171
+QYL + + LA+ FVVC L+ S + LL + MI+VD +G+MA+ I
Sbjct: 1104 QQYLTVLPEGIFTLALCFVPTFVVCYLLLGLDMCSGILNLLSIIMILVDTIGLMAVWGIS 1163
Query: 1172 LNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKN-QRMKEALGTMGASVFSGITLTKLV 1230
NAVS++NLV AVG++VEF HIT +F+VS+ +R K+A MG++VF+G+ +T
Sbjct: 1164 YNAVSLINLVTAVGMSVEFVSHITRSFAVSTKPTRLERAKDATVFMGSAVFAGVAMTNFP 1223
Query: 1231 GVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPSRCMLVERQEER 1288
G+++L F++ ++ +++F++ L + LLG LHGLVFLPVVLS GP LV QEE+
Sbjct: 1224 GILILGFAQAQLIQIFFFRLNLLITLLGLLHGLVFLPVVLSYLGPDVNQALV--QEEK 1279
>sp|Q9UHC9|NPCL1_HUMAN Niemann-Pick C1-like protein 1 OS=Homo sapiens GN=NPC1L1 PE=1 SV=2
Length = 1359
Score = 589 bits (1519), Expect = e-167, Method: Compositional matrix adjust.
Identities = 456/1344 (33%), Positives = 688/1344 (51%), Gaps = 166/1344 (12%)
Query: 48 HVEEFCAMYDICGARSDRK-------VLNCPYNIPSVK--PDDLLSSKVQSLCPTI-TG- 96
H +CA YD CG + ++C N P+ K D L+ +Q +CP + TG
Sbjct: 28 HQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLI--LLQKICPRLYTGP 85
Query: 97 --NVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKV 154
CC+ Q +L + L CPAC NF+NL C TCSPNQSLFINVT V+++
Sbjct: 86 NTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQL 145
Query: 155 SNNL--TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFI----GGGAQNFKDWFAF 208
V + + +F + Y+SC V+ T A+ + G N + W F
Sbjct: 146 GAGQLPAVVAYEAFYQHSFAEQSYDSCSRVRVPAAATLAVGTMCGVYGSALCNAQRWLNF 205
Query: 209 IGRRAAANLPGSPYTIKFW---PSAPELSGMIPMNVSAYSC----ADGSLGCSCGDCTSS 261
G +P I F P SG+ P+N C D CSC DC +S
Sbjct: 206 QGDTGNGL---APLDITFHLLEPGQAVGSGIQPLNEGVARCNESQGDDVATCSCQDCAAS 262
Query: 262 PVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFR 321
C + A P ++ + +G + V L IIL S+F FR
Sbjct: 263 --CPAIARP--QALDSTFYLGQMPGSLV------LIIILCSVFAVVTILLV------GFR 306
Query: 322 MKPLVNAMDGSELHSVERQKEENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVAR 381
+ P A D S++ V+ +K +L ++ + T + F++ +G WVA
Sbjct: 307 VAP---ARDKSKM--VDPKKGTSLSDKLSFSTHT-----------LLGQFFQGWGTWVAS 350
Query: 382 NPTLVLSLSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEEL 441
P +L LS+ V+ L GL+ E+ T P +LW P S+A EK F D H PF+R ++
Sbjct: 351 WPLTILVLSVIPVVALAAGLVFTELTTDPVELWSAPNSQARSEKAFHDQHFGPFFRTNQV 410
Query: 442 ILATIPDTTH----------GNLPSIVTESNIKLLFEIQKKIDGLR--ANYSGSMISLTD 489
IL T P+ + N I+ + L E+Q+++ L+ + + ISL D
Sbjct: 411 IL-TAPNRSSYRYDSLLLGPKNFSGILDLDLLLELLELQERLRHLQVWSPEAQRNISLQD 469
Query: 490 ICMKPLGQD------CATQSVLQYFKMD------PKNFDDFGGV------EHVKYC---- 527
IC PL D C S+LQYF+ + N G +H YC
Sbjct: 470 ICYAPLNPDNTSLYDCCINSLLQYFQNNRTLLLLTANQTLMGQTSQVDWKDHFLYCANAP 529
Query: 528 --FQHYTSTE-SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKK 584
F+ T+ SCM+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +
Sbjct: 530 LTFKDGTALALSCMADYGAPVFPFLAIGGYKGKDYSEAEALIMTFSLNNYPAGD-PRLAQ 588
Query: 585 AVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAY 644
A WE+AF++ + M +T F +E S+E+E+ R + D SY+V+F Y
Sbjct: 589 AKLWEEAFLEEMRAFQRRMAGMFQVT--FMAERSLEDEINRTTAEDLPIFATSYIVIFLY 646
Query: 645 ISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLV 704
ISL LG S + SK LGL GV +V+ +V+ ++GFFS +G++S+L+I++V+PFLV
Sbjct: 647 ISLALGSYSSWSRVMVDSKATLGLGGVAVVLGAVMAAMGFFSYLGIRSSLVILQVVPFLV 706
Query: 705 LAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPM 762
L+VG DN+ I V +R ++ P E I AL V PS+ L SLSE + F +G+ PM
Sbjct: 707 LSVGADNIFIFVLEYQRLPRRPGEPREVHIGRALGRVAPSMLLCSLSEAICFFLGALTPM 766
Query: 763 PACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGI 822
PA R F++ + LAV+LDFLLQ++AFVAL+ D R E R+D C+K G
Sbjct: 767 PAVRTFALTSGLAVILDFLLQMSAFVALLSLDSKRQEASRLDVCCCVKPQEL---PPPGQ 823
Query: 823 GQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRD 882
G+ GLL + ++ +A L W + V+ LF+A S+ I GL+Q++ LP+D
Sbjct: 824 GE---GLLLGFFQKAYAPFLLHWITRGVVLLLFLALFGVSLYSMCHISVGLDQELALPKD 880
Query: 883 SYLQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASL 941
SYL YF ++ + +G P+YFV YN+SSE+ N +CS + C++ S +I A+
Sbjct: 881 SYLLDYFLFLNRYFEVGAPVYFVTTLGYNFSSEAGM-NAICSSAGCNNFSFTQKIQYATE 939
Query: 942 IPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGV 1001
P+ SY+A PA+SW+DDF+ W++P + CCR + +G P D+ CP S+ S
Sbjct: 940 FPEQSYLAIPASSWVDDFIDWLTPSS--CCRLYISG---PNKDK--FCP---STVNSLNC 989
Query: 1002 CKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKG----- 1056
K+C + S RPS QF + LPWFLN P+ C KGG AY+ SV+L
Sbjct: 990 LKNCMSITMGS----VRPSVEQFHKYLPWFLNDRPNIKCPKGGLAAYSTSVNLTSDGQVL 1045
Query: 1057 ----------YENGIVQA----------SSFRTYHTPLNRQIDYVNSMRAAREFSSRVSD 1096
+G + A S F YH PL DY ++RAARE ++ ++
Sbjct: 1046 DTVAILSPRLEYSGTISAHCNLYLLDSTSRFMAYHKPLKNSQDYTEALRAARELAANITA 1105
Query: 1097 SLQ--------MEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVV-CLITTCSFWSS 1147
L+ E+FPY++ +++EQYL I L L++ + F V CL+ S
Sbjct: 1106 DLRKVPGTDPAFEVFPYTITNVFYEQYLTILPEGLFMLSLCLVPTFAVSCLLLGLDLRSG 1165
Query: 1148 AIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKN- 1206
+ LL + MI+VD +G MA+ I NAVS++NLV AVG++VEF HIT +F++S+
Sbjct: 1166 LLNLLSIVMILVDTVGFMALWGISYNAVSLINLVSAVGMSVEFVSHITRSFAISTKPTWL 1225
Query: 1207 QRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFL 1266
+R KEA +MG++VF+G+ +T L G++VL ++ ++ +++F++ L + LLG LHGLVFL
Sbjct: 1226 ERAKEATISMGSAVFAGVAMTNLPGILVLGLAKAQLIQIFFFRLNLLITLLGLLHGLVFL 1285
Query: 1267 PVVLSVFGP---PSRCMLVERQEE 1287
PV+LS GP P+ + +R EE
Sbjct: 1286 PVILSYVGPDVNPALALEQKRAEE 1309
>sp|Q6T3U4|NPCL1_MOUSE Niemann-Pick C1-like protein 1 OS=Mus musculus GN=Npc1l1 PE=2 SV=1
Length = 1333
Score = 577 bits (1487), Expect = e-163, Method: Compositional matrix adjust.
Identities = 443/1327 (33%), Positives = 677/1327 (51%), Gaps = 143/1327 (10%)
Query: 40 NSVAGEV---KHVEEFCAMYDICGARSDRK-------VLNCPYNIPS--VKPDDLLSSKV 87
NS GE+ H FC Y+ CG + ++C N P+ V D L + +
Sbjct: 16 NSAQGELYTPTHKAGFCTFYEECGKNPELSGGLTSLSNISCLSNTPARHVTGDHL--ALL 73
Query: 88 QSLCPTITGN-----VCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQ 142
Q +CP + CC+ Q +L + + L CPAC NF+++ C TCSP+Q
Sbjct: 74 QRVCPRLYNGPNDTYACCSTKQLVSLDSSLSITKALLTRCPACSENFVSIHCHNTCSPDQ 133
Query: 143 SLFINVTSVSKVSNNL--TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFI----G 196
SLFINVT V + V + + +F + YESC V+ + A+ + G
Sbjct: 134 SLFINVTRVVQRDPGQLPAVVAYEAFYQRSFAEKAYESCSRVRIPAAASLAVGSMCGVYG 193
Query: 197 GGAQNFKDWFAFIGRRAAANLPGSPYTIKFW---PSAPELSGMIPMNVSAYSC----ADG 249
N + W F G +P I F P GM P++ C +
Sbjct: 194 SALCNAQRWLNFQGDTGNG---LAPLDITFHLLEPGQALADGMKPLDGKITPCNESQGED 250
Query: 250 SLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGF 309
S CSC DC +S C PPP S MG + + II+ + F
Sbjct: 251 SAACSCQDCAAS--CPVIPPPPALRPS--FYMGRMPGW-------LALIIIFTAVFVLLS 299
Query: 310 FHRKRERSRSFRMKPLVNAMDGSELHSVERQKEENLPMQMLGTPRTRNRIQLSIVQGYMS 369
R S R K N GS Q+ NLP + +P T +
Sbjct: 300 VVLVYLRVASNRNK---NKTAGS-------QEAPNLPRKRRFSPHT-----------VLG 338
Query: 370 NFYRKYGKWVARNPTLVLSLSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFD 429
F+ +G VA P VL+LS +V+ L +GL E+ T P +LW P S+A +EK F D
Sbjct: 339 RFFESWGTRVASWPLTVLALSFIVVIALSVGLTFIELTTDPVELWSAPKSQARKEKAFHD 398
Query: 430 SHLAPFYRIEELILATIPDTTHG---------NLPSIVTESNIKLLFEIQKKIDGLR--A 478
H PF+R ++ + +++ N I++ ++ L E+Q+++ L+ +
Sbjct: 399 EHFGPFFRTNQIFVTAKNRSSYKYDSLLLGPKNFSGILSLDLLQELLELQERLRHLQVWS 458
Query: 479 NYSGSMISLTDICMKPLG------QDCATQSVLQYFKMD------PKNFDDFGGV----- 521
+ + ISL DIC PL DC S+LQYF+ + N G
Sbjct: 459 HEAQRNISLQDICYAPLNPHNTSLTDCCVNSLLQYFQNNHTLLLLTANQTLNGQTSLVDW 518
Query: 522 -EHVKYC------FQHYTSTE-SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNN 573
+H YC ++ T+ SC++ + P+ P A+GG+ G +YSEA A ++T+ +NN
Sbjct: 519 KDHFLYCANAPLTYKDGTALALSCIADYGAPVFPFLAVGGYQGTDYSEAEALIITFSINN 578
Query: 574 AVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAIT 633
+ A WE+AF L + + + +AFS+E S+E+E+ R + D
Sbjct: 579 -YPADDPRMAHAKLWEEAF--LKEMQSFQRSTADKFQIAFSAERSLEDEINRTTIQDLPV 635
Query: 634 IVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKST 693
ISYL++F YISL LG S + SK LGL GV +V+ +V+ ++GF+S +GV S+
Sbjct: 636 FAISYLIVFLYISLALGSYSRWSRVAVDSKATLGLGGVAVVLGAVVAAMGFYSYLGVPSS 695
Query: 694 LIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETR---ISNALVEVGPSITLASLSE 750
L+I++V+PFLVLAVG DN+ I V +R +P E R I L V PS+ L SLSE
Sbjct: 696 LVIIQVVPFLVLAVGADNIFIFVLEYQRLP-RMPGEQREAHIGRTLGSVAPSMLLCSLSE 754
Query: 751 VLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLK 810
+ F +G+ MPA R F++ + LA++ DFLLQ+TAFVAL+ D R E R D + C
Sbjct: 755 AICFFLGALTSMPAVRTFALTSGLAIIFDFLLQMTAFVALLSLDSKRQEASRPDVVCC-- 812
Query: 811 LSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIE 870
++ + ++K GLL + ++++ L ++ V+ LF+ A++ L I
Sbjct: 813 ----FSSRNLPPPKQKEGLLLCFFRKIYTPFLLHRFIRPVVLLLFLVLFGANLYLMCNIS 868
Query: 871 PGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYF-VVKNYNYSSESRQTNQLCSISQCDS 929
GL+Q + LP+DSYL YF ++ +L +GPP+YF YN+S+E+ N +CS + C+S
Sbjct: 869 VGLDQDLALPKDSYLIDYFLFLNRYLEVGPPVYFDTTSGYNFSTEAGM-NAICSSAGCES 927
Query: 930 NSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCC 989
SL +I AS P SY+A A+SW+DDF+ W++P + CCR +T G P D+ C
Sbjct: 928 FSLTQKIQYASEFPNQSYVAIAASSWVDDFIDWLTPSS-SCCRIYTRG---PHKDE--FC 981
Query: 990 PSGQSSCGSAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYT 1049
PS +S C + T L RP+T QF + LPWFLN P+ C KGG AY
Sbjct: 982 PSTDTSFNCLKNCMNRT-------LGPVRPTTEQFHKYLPWFLNDTPNIRCPKGGLAAYR 1034
Query: 1050 NSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ--------ME 1101
SV+L +G + AS F YH PL D+ ++RA+R ++ ++ L+ E
Sbjct: 1035 TSVNLS--SDGQIIASQFMAYHKPLRNSQDFTEALRASRLLAANITAELRKVPGTDPNFE 1092
Query: 1102 IFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVC-LITTCSFWSSAIILLVLTMIVVD 1160
+FPY++ ++++QYL + + LA+ FVVC L+ S + LL + MI+VD
Sbjct: 1093 VFPYTISNVFYQQYLTVLPEGIFTLALCFVPTFVVCYLLLGLDIRSGILNLLSIIMILVD 1152
Query: 1161 LMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSG-DKNQRMKEALGTMGAS 1219
+G+MA+ I NAVS++NLV AVG++VEF HIT +F+VS+ + +R K+A MG++
Sbjct: 1153 TIGLMAVWGISYNAVSLINLVTAVGMSVEFVSHITRSFAVSTKPTRLERAKDATIFMGSA 1212
Query: 1220 VFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPSRC 1279
VF+G+ +T G+++L F++ ++ +++F++ L + LLG LHGLVFLPVVLS GP
Sbjct: 1213 VFAGVAMTNFPGILILGFAQAQLIQIFFFRLNLLITLLGLLHGLVFLPVVLSYLGPDVNQ 1272
Query: 1280 MLVERQE 1286
LV ++
Sbjct: 1273 ALVLEEK 1279
>sp|Q12200|NPC1_YEAST Niemann-Pick type C-related protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NCR1 PE=1 SV=1
Length = 1170
Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust.
Identities = 375/1232 (30%), Positives = 610/1232 (49%), Gaps = 141/1232 (11%)
Query: 53 CAMYDICGARSD-RKVLNCPYNIPSVKPDDLLSSKVQSLCPTITGN-------VCCTEDQ 104
CAMY CG +S L CP +P +LS + L + G CCT+DQ
Sbjct: 23 CAMYGNCGKKSVFGNELPCP--VPRSFEPPVLSDETSKLLVEVCGEEWKEVRYACCTKDQ 80
Query: 105 FDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNNLT-VDGI 163
LR +Q+A P + CPACL+NF NLFC TC+ +Q F+N+T V K + V +
Sbjct: 81 VVALRDNLQKAQPLISSCPACLKNFNNLFCHFTCAADQGRFVNITKVEKSKEDKDIVAEL 140
Query: 164 DYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQNFKDWFAFIGRRAAANLPGSPYT 223
D ++ ++ Y+SCK++KF N A+D IGGGA+N+ + F+G A L GSP+
Sbjct: 141 DVFMNSSWASEFYDSCKNIKFSATNGYAMDLIGGGAKNYSQFLKFLGD-AKPMLGGSPFQ 199
Query: 224 IKF-WPSAPELSGMIPMNVSAYSCADGSLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMG 282
I + + A E N Y+C D C+C DC S C P K C K+G
Sbjct: 200 INYKYDLANEEKEWQEFNDEVYACDDAQYKCACSDCQES--CPHLKP--LKDGVC--KVG 253
Query: 283 SLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSF---RMKPLVNAMDGSELHSVER 339
L C ++ I Y I F W + ++++ + P ++D SE + E
Sbjct: 254 PL--PCFSLSVLIFYTICALFAFMWYYLCKRKKNGAMIVDDDIVPESGSLDESETNVFES 311
Query: 340 QKEENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVLSLSMALVLLLCL 399
E + G ++N + K G++ NP +L ++ + +
Sbjct: 312 FNNET-----------------NFFNGKLANLFTKVGQFSVENPYKILITTVFSIFVFSF 354
Query: 400 GLIRF-EVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIV 458
+ ++ +ET P LWV S +EK +FD + PFYR E++ + ++
Sbjct: 355 IIFQYATLETDPINLWVSKNSEKFKEKEYFDDNFGPFYRTEQIFVV-------NETGPVL 407
Query: 459 TESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQD-CATQSVLQYFKMDPKNFDD 517
+ + F+++ I S I D+C +P C +S QYF+ N D
Sbjct: 408 SYETLHWWFDVENFIT--EELQSSENIGYQDLCFRPTEDSTCVIESFTQYFQGALPNKDS 465
Query: 518 FGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDR 577
+ ++ C + + C+ F+ PL + FS ++ A AFVVT + N
Sbjct: 466 WK--RELQECGKFPVN---CLPTFQQPLKTNLL---FSDDDILNAHAFVVTLLLTN---- 513
Query: 578 EGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVIS 637
T+ A WE+ + D +P + L ++F++E S+E+EL + D T+ IS
Sbjct: 514 ---HTQSANRWEERLEEYLLDLKVP----EGLRISFNTEISLEKELNNNN--DISTVAIS 564
Query: 638 YLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIM 697
YL+MF Y + L +++LLG+SG+++V+ S++ + GF + G+KSTLII
Sbjct: 565 YLMMFLYATWALRRKDG------KTRLLLGISGLLIVLASIVCAAGFLTLFGLKSTLIIA 618
Query: 698 EVIPFLVLAVGVDNMCILVHAVKR---QQLELPLETRISNALVEVGPSITLASLSEVLAF 754
EVIPFL+LA+G+DN+ ++ H R Q+ E ++ +I +A+ + PSI ++ L + F
Sbjct: 619 EVIPFLILAIGIDNIFLITHEYDRNCEQKPEYSIDQKIISAIGRMSPSILMSLLCQTGCF 678
Query: 755 AVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSS 814
+ +F+ MPA F++++ ++V+ + +LQ+TA+V+++ R+ K++
Sbjct: 679 LIAAFVTMPAVHNFAIYSTVSVIFNGVLQLTAYVSILSLYEKRSNYKQI----------- 727
Query: 815 YADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLE 874
G + K L + + K +I +F A+ S+ I+ GL+
Sbjct: 728 -----TGNEETKESFLKTFY-------FKMLTQKRLIIIIFSAWFFTSLVFLPEIQFGLD 775
Query: 875 QKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLN 934
Q + +P+DSYL YF ++ L +GPP+Y VVKN + + Q + C+ +SL N
Sbjct: 776 QTLAVPQDSYLVDYFKDVYSFLNVGPPVYMVVKNLDLTKRQNQQKICGKFTTCERDSLAN 835
Query: 935 EISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCR-KFTNGSYCPPDDQPPCCPSGQ 993
+ + S I +P A+WLDD+ ++++P+ CCR K CPP PS
Sbjct: 836 VLEQER---HRSTITEPLANWLDDYFMFLNPQNDQCCRLKKGTDEVCPPS-----FPS-- 885
Query: 994 SSCGSAGVCKDCTTCFHHSDL---LKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTN 1050
+ C TCF + P F E L ++NA PS C GG Y+
Sbjct: 886 ---------RRCETCFQQGSWNYNMSGFPEGKDFMEYLSIWINA-PSDPCPLGGRAPYST 935
Query: 1051 SVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSL-QMEIFPYSVFY 1109
++ Y V AS FRT H PL Q D++ + R+S S ++++F YS FY
Sbjct: 936 AL---VYNETSVSASVFRTAHHPLRSQKDFIQAYSDG----VRISSSFPELDMFAYSPFY 988
Query: 1110 MYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILK 1169
++F QY + L + AI +F + + + SS ++ LV+TMI+VD+ +MA+L
Sbjct: 989 IFFVQYQTLGPLTLKLIGSAIILIFFISSVFLQNIRSSFLLALVVTMIIVDIGALMALLG 1048
Query: 1170 IQLNAVSVVNLVMAVGIAVEFCVHITHAFSV----SSGDKNQRMKEALGTMGASVFSGIT 1225
I LNAVS+VNL++ VG+ VEFCVHI +F+V + D N R+ +L T+G SV GIT
Sbjct: 1049 ISLNAVSLVNLIICVGLGVEFCVHIVRSFTVVPSETKKDANSRVLYSLNTIGESVIKGIT 1108
Query: 1226 LTKLVGVIVLCFSRTEVFVVYYFQMYLALVLL 1257
LTK +GV VL F+++++F V+YF+M+ L+++
Sbjct: 1109 LTKFIGVCVLAFAQSKIFDVFYFRMWFTLIIV 1140
>sp|Q19127|NPC1_CAEEL Niemann-Pick C1 protein homolog 1 OS=Caenorhabditis elegans GN=ncr-1
PE=1 SV=2
Length = 1383
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 324/1315 (24%), Positives = 578/1315 (43%), Gaps = 133/1315 (10%)
Query: 47 KHVEEFCAMYDICGARSDRKVLNCPYNIPSVKPDDLLSS-----KVQSLCPTI-TGN--V 98
H + C M +C ++ C N +V+P + K+ CP + TG+ +
Sbjct: 16 HHGDAGCIMRGLCQKHTENAYGPCVTNDTNVEPTAFDKTHPAYEKMVEFCPHLLTGDNKL 75
Query: 99 CCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNN- 157
CCT Q + L Q+ QA L CP+C NF L+CE TCSPNQ F++++ + +
Sbjct: 76 CCTPSQAEGLTKQIAQARHILGRCPSCFDNFAKLWCEFTCSPNQQDFVSISEMKPIEKKE 135
Query: 158 ----------LTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQ-NFKDWF 206
V+ ++Y ++ F +G++ SCKDV FG AL + +W
Sbjct: 136 GFTPEYQPAEAYVNTVEYRLSTDFAEGMFSSCKDVTFG--GQPALRVMCTSTPCTLTNWL 193
Query: 207 AFIG-RRAAANLPGSPYTIKFWP-SAPELSGMIPMNVSAYSCAD----GSLGCSCGDCTS 260
FIG + N+P + + P P MNV+ C G CS +C
Sbjct: 194 EFIGTQNLDLNIPIHTKFLLYDPIKTPPSDRSTYMNVNFTGCDKSARVGWPACSTSECNK 253
Query: 261 SPVCSSTAPPPHKSS--SCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSR 318
+ K+S +C+V C++ + + +I +++ GF +
Sbjct: 254 EEYANLIDLDDGKTSGQTCNVH----GIACLNIFVMLAFIGSLAVLLCVGFVFTSYDE-- 307
Query: 319 SFRMKPLVNAMDGSELHSVERQKEENLPMQMLGTPRTRNRIQLS--IVQGYMSNFYRKYG 376
D + L + +E +P+ RNRI+ + + +M N R G
Sbjct: 308 -----------DYTNLRQTQSGEE---------SPK-RNRIKRTGAWIHNFMENNARDIG 346
Query: 377 KWVARNPTLVLSLSMALVLLLCL-GLIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPF 435
RNP + A VL+ CL G+I + T +W P SRA +E++ F+++
Sbjct: 347 MMAGRNPKSHFFIGCA-VLIFCLPGMIYHKESTNVVDMWSSPRSRARQEEMVFNANFGRP 405
Query: 436 YRIEELILATIPD-TTHGNLPSIVTESNI-KLLFEIQKKIDGLRANYS-GSMISLTDICM 492
R ++++L + D + G L V +I + LF+I I + S G I+L D+C
Sbjct: 406 QRYQQIMLLSHRDFQSSGKLYGPVFHKDIFEELFDILNAIKNISTQDSDGRTITLDDVCY 465
Query: 493 KPL--GQDCATQSVLQYFK-----------------MDPKNFDDFGG-------VEHVKY 526
+P+ G DC S YF+ D FD F + H+
Sbjct: 466 RPMGPGYDCLIMSPTNYFQGNKEHLDMKSNKEETVSEDDDAFDYFSSEATTDEWMNHMAA 525
Query: 527 CF-----QHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNE 581
C Q S SCM + GP P+ G + N+ A++ ++T V R E
Sbjct: 526 CIDQPMSQKTKSGLSCMGTYGGPSAPNMVFGK-NSTNHQAANSIMMTILVTQ---RTEPE 581
Query: 582 TKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVM 641
+KA WEK F++ K+ +S + +F +E SI +E++ ++ + +T+VI+ +
Sbjct: 582 IQKAELWEKEFLKFCKEY---REKSPKVIFSFMAERSITDEIENDAKDEIVTVVIALAFL 638
Query: 642 FAYISLTLGD----TPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIM 697
Y++ +LG L S + S++ LG+ V++ +LS S G FS G+ +
Sbjct: 639 IGYVTFSLGRYFVCENQLWSILVHSRICLGMLSVIINLLSSFCSWGIFSMFGIHPVKNAL 698
Query: 698 EVIPFLVLAVGVDNMCILVHAVKRQQLELPLETR------ISNALVEVGPSITLASLSEV 751
V F+V +GV ++V +Q++ +P + + + P++ +SL
Sbjct: 699 VVQFFVVTLLGVCRTFMVVKYYAQQRVSMPYMSPDQCPEIVGMVMAGTMPAMFSSSLGCA 758
Query: 752 LAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKL 811
+F +G F +PA R F ++A LAVL+D +L T F+AL V+D R + + + ++
Sbjct: 759 FSFFIGGFTDLPAIRTFCLYAGLAVLIDVVLHCTIFLALFVWDTQRELNGKPEFFFPYQI 818
Query: 812 SSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEP 871
G + + ++ A L +I +F+A + ++ L ++I
Sbjct: 819 KDLLGAYLIGRQRATDTFMTQFFHFQVAPFLMHRMTRIITGIIFIASFITTVILSSKISV 878
Query: 872 GLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNS 931
G +Q + SY+ +F + + +GPP++F V N+ C+ C S
Sbjct: 879 GFDQSMAFTEKSYISTHFRYLDKFFDVGPPVFFTVDGELDWHRPDVQNKFCTFPGCSDTS 938
Query: 932 LLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPS 991
N ++ A + +Y++ +W+D++L WIS ++ CC+ + + D C +
Sbjct: 939 FGNIMNYAVGHTEQTYLSGEMYNWIDNYLEWISRKS-PCCKVYVH------DPNTFCSTN 991
Query: 992 GQSSCGSAGVCKDC------TTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGH 1045
S C+ C + S ++ RPS F L FL P++ C GG
Sbjct: 992 RNKSALDDKACRTCMDFDYVANSYPKSSIMYHRPSIEVFYRHLRHFLEDTPNSECVFGGR 1051
Query: 1046 GAYTNSVDLKGYENGIVQASSFRTYHTPL--NRQIDYVNSMRAAREFSSRVSDSLQ--ME 1101
++ +++ G +QAS F T+H L + D++ +M AR S R+ S+
Sbjct: 1052 ASFKDAISFTS--RGRIQASQFMTFHKKLSISNSSDFIKAMDTARMVSRRLERSIDDTAH 1109
Query: 1102 IFPYSVFYMYFEQYLDIWRTALINLAIAIGAVF-VVCLITTCSFWSSAIILLVLTMIVVD 1160
+F YS + ++EQY I L I + VF ++C+ +A ++
Sbjct: 1110 VFAYSKIFPFYEQYSTIMPILTTQLFITVVGVFGIICVTLGIDVKGAACAVICQVSNYFH 1169
Query: 1161 LMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDK-NQRMKEALGTMGAS 1219
++ M I I +NA+S NLVM+ GI +EF V++ ++ S + R + +G++G
Sbjct: 1170 IVAFMYIFNIPVNALSATNLVMSSGILIEFSVNVLKGYACSLRQRAKDRAESTVGSIGPI 1229
Query: 1220 VFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFG 1274
+ SG +T + L + ++ VY+F+++L ++ +H L+ LP++L+ G
Sbjct: 1230 ILSGPVVTMAGSTMFLSGAHLQIITVYFFKLFLITIVSSAVHALIILPILLAFGG 1284
>sp|P34389|NPC2_CAEEL Niemann-Pick C1 protein homolog 2 OS=Caenorhabditis elegans GN=ncr-2
PE=3 SV=2
Length = 1274
Score = 348 bits (892), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 326/1240 (26%), Positives = 542/1240 (43%), Gaps = 147/1240 (11%)
Query: 96 GNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVS 155
VCCTE Q + ++ A L CP+C NF L+C+ TCSP+QS F+ V +
Sbjct: 83 AQVCCTELQLKGMTDRISNAATILGSCPSCFDNFAKLWCQFTCSPDQSKFMKVMETTGPK 142
Query: 156 NNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIG-GGAQNFKDWFAFIGRRAA 214
N V +++ + F +GLYESC+ F N AL + GG +F++++ F+G +
Sbjct: 143 N--VVVKMEFKVNRDFVEGLYESCRHTWFA--NGLALRLMSLGGKVSFENFYGFMGTK-- 196
Query: 215 ANLPGS-PYTIKFWPSAPELSGMIPMNVSAYSCADGSLGCSCGDCTSSPVCSSTAPPPHK 273
NL S P +F S + + IP S C DC P + K
Sbjct: 197 -NLAQSIPINTEFQFSRMKNAMNIPTTPCHKSAGPKVPACGAIDC---PTNAHQLVDISK 252
Query: 274 SSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSE 333
K+ + ++ L I + +++ + + RS A +G +
Sbjct: 253 VEHLGTKVFHPHFPDFEWLLKICGCLALTVLLVFILKYSCHRRS----------APNGED 302
Query: 334 LHSVERQKEENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVLSLSMAL 393
V+ K NL +Q G +Y V ++P + +SL + +
Sbjct: 303 GCYVDLGKG-NLEVQFEG-------------------LCARYANAVIKHPLIFVSLGLIV 342
Query: 394 VLLLCLGLIRFEVETRP-EKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHG 452
C G +F T +++ G EK F S P +RIE+ I +P TT
Sbjct: 343 AAACCSGNFKFHSLTHSVDQVSAADGETRRNEKKFIHS-FGPNHRIEQ-IFINLPPTTKS 400
Query: 453 --NLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQD--CATQSVLQYF 508
N+P + +F++ I L A Y S + L DIC KP+G++ CA S YF
Sbjct: 401 MFNMPLF------EEMFQLVGNIQNLTACYGNSSVKLDDICYKPIGKNHGCAIMSPTNYF 454
Query: 509 KMDPKNFDDFG------------GVEHVKYCFQH-----YTSTESCMSAFKGPLDPSTAL 551
+ NF++ G EH+KYC ++ S SC F GP+DP
Sbjct: 455 QNKWTNFENAGPPTIDDEIFDDQHWEHLKYCIRNPLTVSTYSEMSCFGEFSGPIDPILVF 514
Query: 552 GGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTL 611
GG S + A + + V G E +A+AWE AF+ + + + K+
Sbjct: 515 GG-SNESIKGAEMYYTARTIMITVLIRGPE-DQAIAWETAFLNM-----MSRYEMKHANF 567
Query: 612 AFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLG--DTPHLS--SFYISSKVLLG 667
F +E+S+ EE+ D I VI+ + ++ LG P S S + K+L+
Sbjct: 568 TFMTETSVAEEIHTAVETDKIVSVIACAAVLIWVITMLGINHWPESSILSALVHHKLLIS 627
Query: 668 LSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ--LE 725
+S V++ ++SV S+G FS GV +T + V+ F++ +G++ + +++ +
Sbjct: 628 ISAVMISVISVWCSIGMFSLFGVHATDNAIVVLFFVITCLGINRIFVIIRTFQANGHCYG 687
Query: 726 LP------LETRISNALVEVGPSITLASL-SEVLAFAVGSFIP-----MPACRVFSMFAA 773
LP + RISN + P + SL F G +P MPA VF+ A
Sbjct: 688 LPNISYREMNHRISNVMRRSIPIVLTNSLICSTCLFLAGGVLPYVSVSMPAVEVFARHAG 747
Query: 774 LAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYA-----DSDKGIGQRKPG 828
LA+L+D + + L +D R + + P +LS+ ++ G R P
Sbjct: 748 LAILMDTAFYLLVMLPLFQYDARREMSGKCEIWPWYELSNESKINLCMEAVDG-NLRSP- 805
Query: 829 LLARYMKEVHATIL-----SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 883
+ K A +L +W +SL +A LC +E G Q + S
Sbjct: 806 --VDWFKLAIAPLLLKKICRIWIATFFFVSLIIA---CYCTLC--LEFGFNQVMAFSETS 858
Query: 884 YLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIP 943
YL +F N++E+L IGPPL+FVV+ + + N+ C+++ CD NS+ N+I +
Sbjct: 859 YLTKHFQNMNENLNIGPPLWFVVEGDVKWHDPKMQNKFCTLAGCDDNSMGNKIRSLAYAE 918
Query: 944 --QSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGV 1001
+ +Y+ WLD +L ++ P G C K +C P + + S S+
Sbjct: 919 NYKGNYLHGDVNIWLDSYLQFMHPR--GSCCKMDGKQFCDPSN------ATHCSSCSSSS 970
Query: 1002 CKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI 1061
TT + +F L FL PS CA GG +++L NG
Sbjct: 971 VASLTT------------TEYEFYRNLHHFLETPPSIQCAHGGMALAKPAINLT--RNGK 1016
Query: 1062 VQASSFRTYHTPLN--RQIDYVNSMRAAREFSSRVSDSLQM---EIFPYSVFYMYFEQYL 1116
+Q++ F T+ LN I ++ R A+ + + L++ +++ YS F+ Y+EQYL
Sbjct: 1017 IQSAYFSTFFKKLNLSDSIQLYDAWRFAKYLADDIERELEIPGVKVYVYSTFFPYYEQYL 1076
Query: 1117 DI-WRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAV 1175
+ + + + A + L + S + + VL + LM M +L I +N V
Sbjct: 1077 TLSTTVYTLVVLVLFVAFVTISLFLRVNLAGSLVTVFVLLSSYLHLMEWMYLLGITVNVV 1136
Query: 1176 SVVNLVMAVGIAVEFCVHITHAFSVSSGDK-NQRMKEALGTMGASVFSGITLTKLVGVIV 1234
SV+N+ M++GIAVEF + H F S K +R AL + G++ SGI ++
Sbjct: 1137 SVINMAMSLGIAVEFFGQMLHGFYNSKKPKREERAFAALVSNGSTTLSGIFPAIMITAGC 1196
Query: 1235 LCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFG 1274
L F+ + V + Y+ + + L+ +HG+V++P +L++FG
Sbjct: 1197 LSFADSRVLITYFCNQLVGIGLVCAVHGVVYMPTLLAIFG 1236
>sp|Q61115|PTC1_MOUSE Protein patched homolog 1 OS=Mus musculus GN=Ptch1 PE=2 SV=1
Length = 1434
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 13/235 (5%)
Query: 580 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 636
NE + A AW++ +V++ + P S L F++ +++++ LK S I +
Sbjct: 374 NEDRAAAILEAWQRTYVEVVHQSVAP--NSTQKVLPFTT-TTLDDILKSFSDVSVIRVAS 430
Query: 637 SYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLII 696
YL+M AY LT+ L S+ +GL+GV+LV LSV +G S IG+
Sbjct: 431 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 485
Query: 697 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 754
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 486 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 545
Query: 755 AVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCL 809
+ + IP+PA R FS+ AA+ V+ +F + + F A++ D R ED+R+D C
Sbjct: 546 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCF 600
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 1062 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1121
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 955 IEYAQFPFYLNGLRDTSDFVEAIEKVRVICNNYT-SLGLSSYPNGYPFLFWEQYISLRHW 1013
Query: 1122 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 1181
L+++++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1014 LLLSISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILI 1073
Query: 1182 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 1241
+VGI VEF VH+ AF + GDKN R AL M A V G ++ L+GV++L S +
Sbjct: 1074 ASVGIGVEFTVHVALAFLTAIGDKNHRAMLALEHMFAPVLDG-AVSTLLGVLMLAGSEFD 1132
Query: 1242 VFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGP 1275
V Y+F + L +LG L+GLV LPV+LS FGP
Sbjct: 1133 FIVRYFFAVLAILTVLGVLNGLVLLPVLLSFFGP 1166
>sp|Q13635|PTC1_HUMAN Protein patched homolog 1 OS=Homo sapiens GN=PTCH1 PE=1 SV=2
Length = 1447
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 13/235 (5%)
Query: 580 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 636
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 388 NEDKAAAILEAWQRTYVEVVHQSV--AQNSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 444
Query: 637 SYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLII 696
YL+M AY LT+ L S+ +GL+GV+LV LSV +G S IG+
Sbjct: 445 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 499
Query: 697 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 754
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 500 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 559
Query: 755 AVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCL 809
+ + IP+PA R FS+ AA+ V+ +F + + F A++ D R ED+R+D C
Sbjct: 560 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCF 614
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 1062 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1121
++ + F Y L D+V ++ R S + SL + +P ++++EQY+ +
Sbjct: 969 IEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 1027
Query: 1122 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 1181
L+ +++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1028 LLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILI 1087
Query: 1182 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 1241
+VGI VEF VH+ AF + GDKN+R AL M A V G ++ L+GV++L S +
Sbjct: 1088 ASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDG-AVSTLLGVLMLAGSEFD 1146
Query: 1242 VFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGP 1275
V Y+F + L +LG L+GLV LPV+LS FGP
Sbjct: 1147 FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1180
>sp|Q90693|PTC1_CHICK Protein patched homolog 1 OS=Gallus gallus GN=PTCH1 PE=1 SV=1
Length = 1442
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 13/235 (5%)
Query: 580 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 636
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 388 NEDKAAAILEAWQRMYVEVVHQSV--AQNSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 444
Query: 637 SYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLII 696
YL+M AY LT+ L S+ +GL+GV+LV LSV +G S IG+
Sbjct: 445 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 499
Query: 697 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 754
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 500 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 559
Query: 755 AVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCL 809
+ + IP+PA R FS+ AA+ V+ +F + + F A++ D R ED+R+D C
Sbjct: 560 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCF 614
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 129/214 (60%), Gaps = 2/214 (0%)
Query: 1062 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1121
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 968 IEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYT-SLGIASYPNGYPFLFWEQYIGLRHW 1026
Query: 1122 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 1181
L+++++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1027 LLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAVPVVILI 1086
Query: 1182 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 1241
+VGI VEF VHI AF + GDKN+R AL M A V G ++ L+GV++L S +
Sbjct: 1087 ASVGIGVEFTVHIALAFLTAIGDKNRRAVLALEHMFAPVLDG-AVSTLLGVLMLAGSEFD 1145
Query: 1242 VFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGP 1275
V Y+F + L +LG L+GLV LPV+LS FGP
Sbjct: 1146 FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1179
>sp|Q09614|PTC1_CAEEL Protein patched homolog 1 OS=Caenorhabditis elegans GN=ptc-1 PE=1
SV=2
Length = 1408
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 121/208 (58%), Gaps = 6/208 (2%)
Query: 1070 YHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1129
Y T L V++++ R R +D + FP + + ++EQYL + T + AI+
Sbjct: 1132 YLTGLTDTAVIVDAIKDIRSVCERFTDQ-GLPNFPQGIAFTFWEQYL--FLTGNLMQAIS 1188
Query: 1130 IGAVFVVCLITTCSF--WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIA 1187
I + V C+I+ F W++ +++ +L ++ +L G M ++ I+LN VS V L+ AVGI
Sbjct: 1189 IITISVFCVISVLLFNPWAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIG 1248
Query: 1188 VEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYY 1247
VEF VH+ +F + G ++QR A+ + V G + + L+G+++L FS E V Y+
Sbjct: 1249 VEFTVHVVVSFLTALGTRSQRTSSAVDRVFVPVIHG-SFSTLLGILMLGFSEFEFVVKYF 1307
Query: 1248 FQMYLALVLLGFLHGLVFLPVVLSVFGP 1275
F + AL+ +G ++GL+ LPV+LS FGP
Sbjct: 1308 FIVMTALICIGIINGLILLPVLLSWFGP 1335
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 162/371 (43%), Gaps = 39/371 (10%)
Query: 587 AWEKAFVQLAKDELLPMVQSKN--LTLAFSSESSIEEELKRESTADAITIVISYLVMFAY 644
AW++ F + + + + N TL + +SI + L+ + I+ Y +M AY
Sbjct: 609 AWQRNFTKSLYNHKANVDEDGNERRTLHPLASTSIADMLEEFCQFNYTIILAGYALMLAY 668
Query: 645 ISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLV 704
+T + S + L L+GV++V + + +G + G++ +++PFL
Sbjct: 669 AIVTQARFDNCLP-ATESSMGLALAGVLVVTFASVAGLGLATWFGIEFNAATTQIVPFLT 727
Query: 705 LAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPA 764
L +GVDNM +L+H + ++ + E G SI S++ +L+F G+ +P+PA
Sbjct: 728 LGIGVDNMFMLLHNYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPA 787
Query: 765 CRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCL--------------- 809
R F +++ + +F+ +T + A+I D R + +R D + CL
Sbjct: 788 LRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLVCCLYGDTREESYSMISKP 847
Query: 810 KLSSSY---ADSDKGIGQRKPGL---------------LARYMKEVHATILSLWGVKIAV 851
K+ S A S+ I Q+ G+ L +++ + +S K+A+
Sbjct: 848 KIQSKRIIGAPSEASIMQQFDGITQAQMASSDDPAPWSLHSFIRYYYIPFISKPASKVAI 907
Query: 852 ISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVK--NY 909
I A AS + GLE VLP + + ++ P++ V+K N
Sbjct: 908 IVGCCALLGASFIGMRQSTLGLELGDVLPEHTAPAQFLRARDKYFSFY-PMFAVIKGPNI 966
Query: 910 NYSSESRQTNQ 920
+Y+ + RQ +
Sbjct: 967 DYAHQQRQIDN 977
>sp|O35595|PTC2_MOUSE Protein patched homolog 2 OS=Mus musculus GN=Ptch2 PE=2 SV=2
Length = 1182
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 125/222 (56%), Gaps = 8/222 (3%)
Query: 587 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 646
AW++ FVQLA+ E LP S+ + AFSS +++++ L+ S +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPANASQQIH-AFSS-TTLDDILRAFSEVSTTRVVGGYLLMLAYAC 410
Query: 647 LTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 706
+T+ L S+ +GL+GV+LV L+V +G + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 465
Query: 707 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 766
+GVD++ +L HA + + PL R+ L G S+ L S++ ++AF + + +P+PA R
Sbjct: 466 IGVDDIFLLAHAFTKAPPDTPLPERMGECLRSTGTSVALTSVNNMVAFFMAALVPIPALR 525
Query: 767 VFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPC 808
FS+ AA+ V +F + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAILSLDLRRRHRQRLDVLCC 567
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 2/215 (0%)
Query: 1074 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAV 1133
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACTEAGQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILLVCT 975
Query: 1134 FVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVH 1193
F+VC + S W++ +I+LVL M+ V+L G+M L I+L+A+ VV LV ++GI VEF VH
Sbjct: 976 FLVCALLLLSPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASIGIGVEFTVH 1035
Query: 1194 ITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLA 1253
+ F S G +N R AL A V G ++ L+G+++L S + + Y+F +
Sbjct: 1036 VALGFLTSHGSRNLRAASALEQTFAPVTDG-AVSTLLGLLMLAGSNFDFIIRYFFVVLTV 1094
Query: 1254 LVLLGFLHGLVFLPVVLSVFGPPSRCMLVERQEER 1288
L LLG LHGL+ LPV+LS+ GPP + + V ++ +
Sbjct: 1095 LTLLGLLHGLLLLPVLLSILGPPPQVVQVYKESPQ 1129
>sp|Q9Y6C5|PTC2_HUMAN Protein patched homolog 2 OS=Homo sapiens GN=PTCH2 PE=2 SV=2
Length = 1203
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 8/222 (3%)
Query: 587 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 646
AW++ FVQLA+ E LP S+ + AFSS +++++ L S A +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPENASQQIH-AFSS-TTLDDILHAFSEVSAARVVGGYLLMLAYAC 410
Query: 647 LTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 706
+T+ L S+ +GL+GV+LV L+V +G + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGSVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 465
Query: 707 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 766
+GVD++ +L HA PL+ R+ L G S+ L S++ + AF + + +P+PA R
Sbjct: 466 IGVDDVFLLAHAFTEALPGTPLQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALR 525
Query: 767 VFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPC 808
FS+ AA+ V F+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCTFVAVMLVFPAILSLDLRRRHCQRLDVLCC 567
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 4/220 (1%)
Query: 1074 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAV 1133
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACAEAGQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILLVCT 975
Query: 1134 FVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVH 1193
F+VC + + W++ +I+LVL M+ V+L G+M L I+L+A+ VV LV +VGI VEF VH
Sbjct: 976 FLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASVGIGVEFTVH 1035
Query: 1194 ITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLA 1253
+ F + G +N R AL A V G ++ L+G+++L S + V Y+F
Sbjct: 1036 VALGFLTTQGSRNLRAAHALEHTFAPVTDG-AISTLLGLLMLAGSHFDFIVRYFFAALTV 1094
Query: 1254 LVLLGFLHGLVFLPVVLSVFGPPSRCMLVERQEERPSVSS 1293
L LLG LHGLV LPV+LS+ GPP +++ +E P + S
Sbjct: 1095 LTLLGLLHGLVLLPVLLSILGPPPE--VIQMYKESPEILS 1132
>sp|Q98864|PTC1_DANRE Protein patched homolog 1 OS=Danio rerio GN=ptch1 PE=2 SV=1
Length = 1220
Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 130/224 (58%), Gaps = 15/224 (6%)
Query: 1057 YENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYL 1116
Y NG+ QAS F I+ + S+R E R ++ +P ++++EQY+
Sbjct: 966 YLNGLRQASDF----------IEAIESVRTICEEFMRQG----IKNYPNGYPFLFWEQYI 1011
Query: 1117 DIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVS 1176
+ L+++++ + F+VC I + W++ +I+ +L M+ V+L G+M ++ I+L+A+
Sbjct: 1012 GLRHWFLLSISVVLACTFLVCAILLLNPWTAGVIVFILPMMTVELFGIMGLIGIKLSAIP 1071
Query: 1177 VVNLVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLC 1236
VV L+ +VGI VEF VHI F + GD+N R A+ M A V G ++ L+GV++L
Sbjct: 1072 VVILIASVGIGVEFTVHIALGFLTAIGDRNTRSAVAMEHMFAPVIDG-AISTLLGVLMLA 1130
Query: 1237 FSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPSRCM 1280
S + + Y+F + L LLG L+GLV LPV+LS+ GPP+ +
Sbjct: 1131 GSEFDFIMRYFFAVLAILTLLGILNGLVLLPVLLSLMGPPAEVV 1174
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 131/245 (53%), Gaps = 8/245 (3%)
Query: 565 FVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELK 624
F Y +++ E T +W++ FV++ + P S N+ AFS+ +++ + +K
Sbjct: 359 FKDDYEIHDINWNEDKATAILESWQRKFVEVVHGSI-PQNSSSNV-YAFST-TTLNDIMK 415
Query: 625 RESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGF 684
S I + YL+M AY +T+ L S+ +GL+GV+LV LSV +G
Sbjct: 416 SFSDVSVIRVAGGYLLMLAYACVTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGL 470
Query: 685 FSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSIT 744
S +G+ +V+P L L +GVD+M +L H+ + +P + R + L G S+
Sbjct: 471 CSLLGLSFNAATTQVLPSLALGIGVDDMFLLGHSFTETRSNIPFKERTGDCLRRTGTSVA 530
Query: 745 LASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVD 804
L S++ ++AF + + +P+PA R FS+ AA+ V+ +F + + F A++ D R EDKR+D
Sbjct: 531 LTSVNNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMALLIFPAILSLDLHRREDKRLD 590
Query: 805 CIPCL 809
+ C
Sbjct: 591 ILCCF 595
>sp|Q0EEE2|PTHD3_MOUSE Patched domain-containing protein 3 OS=Mus musculus GN=Ptchd3 PE=1
SV=1
Length = 906
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 143/634 (22%), Positives = 267/634 (42%), Gaps = 83/634 (13%)
Query: 343 ENLPMQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVLSLSMALVLLLCLGLI 402
E LP P R R + ++ +S ++++G V NP L L L L GLI
Sbjct: 56 ERLPPLGQEAPPPR-RCHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTGLI 114
Query: 403 RFEVETRP-EKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSI--VT 459
E E+ + GS A E+ F H F + + ++ N SI V+
Sbjct: 115 FLPKEKENLEEQYTPIGSPAKAERRFVQGH---FSTNDTYRFSASRTSSETNFASILVVS 171
Query: 460 ESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKM--DPKNFDD 517
+N L EI K++ L + ++ G Q V +K P N
Sbjct: 172 LANSLLEPEIFKEVSKLDQAVQALKV------VQENGTQILYQEVCAKYKTLCVPPN--- 222
Query: 518 FGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTA--LGGFSGNN-----------YSEASA 564
+ + +QH +S F P+ L GF G N E+ A
Sbjct: 223 -----PLLFSWQHNSSLNLSDLTFPIHNTPTQLIYLAGFFGGNVLGQMTGKSQRLVESRA 277
Query: 565 FVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELK 624
+ Y + + +++++ AW F+ D + + + FSS + +L+
Sbjct: 278 MRLLYYLKT---EDPEDSERSQAWLTHFLDHFNDMKSSLTLEEIEVVYFSS---LSRQLE 331
Query: 625 RESTADAITIV--ISYL--VMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLG 680
E+T+ + + ++Y+ ++FA +S + D I +K+ + + GV V +SV+
Sbjct: 332 FEATSKTVIPLFHLAYILIILFAVVSCSRLDC-------IRNKMCVAVFGVFSVAMSVVS 384
Query: 681 SVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVG 740
G +GV +I+ PFL+L VGVD+M I++ A ++ L + R+SN+ +V
Sbjct: 385 GFGLMLHLGVPFVIIVANS-PFLILGVGVDDMFIMISAWQKTSLSESIRERLSNSYSKVA 443
Query: 741 PSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFD------ 794
SIT+ +++ VLAF G + + F ++ +L + IT F A++ D
Sbjct: 444 VSITITTITNVLAFYTGITSSFRSVQYFCIYTGTTLLFCYFYSITCFGAVMALDGKREVA 503
Query: 795 ---FLRAEDKRVD------CIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLW 845
+L D++ C+P L + + + + + ++ L+
Sbjct: 504 WSRWLEKPDQKYSSLKKSCCVPFGSLIDKHGEDNHPMN--------LFFRDYFGPFLTTS 555
Query: 846 GVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLR-IGPPLYF 904
K V+ L++ + ++SI C +++ GL+ + + DSY+ YFN ++ GP +
Sbjct: 556 KAKFIVVLLYIFYIISSIYGCFQVQEGLDLRNLASDDSYITPYFNVEEDYFSDYGPRVMV 615
Query: 905 VVK---NYNYSSESRQTNQLCSISQCDSNSLLNE 935
+V NY + ++ RQ C ++Q + N +++
Sbjct: 616 IVTESVNY-WDNDVRQKLDKC-MTQFEENEYVDK 647
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 105/185 (56%), Gaps = 11/185 (5%)
Query: 1094 VSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLI----TTCSFWSSAI 1149
++++ ++ + Y+ ++YF+QY I + N+ IA A+F+V L+ CS W
Sbjct: 728 IAENCEVPLMVYNQAFIYFDQYAAIIENTVRNVMIASTAMFIVSLLLIPHPVCSLW---- 783
Query: 1150 ILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAF-SVSSGDKNQR 1208
+ + ++V + G MA + L+++S++NLV+ +G + +F HI++AF S + N++
Sbjct: 784 VTFAIASVIVGVTGFMAFWNVNLDSISMINLVICIGFSFDFSAHISYAFVSSTEPSVNKK 843
Query: 1209 MKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPV 1268
EAL +G V ++ ++GV VL ++ +F ++ M+L + G HGL+F+PV
Sbjct: 844 SIEALYLLGYPVLQS-AISTIIGVCVLSAAKAYIFRTFFKIMFLVM-FFGAAHGLIFIPV 901
Query: 1269 VLSVF 1273
L+ F
Sbjct: 902 FLTFF 906
>sp|Q6GQT6|SCAP_MOUSE Sterol regulatory element-binding protein cleavage-activating
protein OS=Mus musculus GN=Scap PE=1 SV=1
Length = 1276
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 15/231 (6%)
Query: 588 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYIS 646
+ F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI
Sbjct: 243 YHAKFLSSLRARLMLLHPSPNCSL--RAENLVHVHFKEEIGIAELIPLVTTYIILFAYIY 300
Query: 647 LTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 706
+ + SK L L+ VV V+ S+L SVG + G+ TL E+ P+LV+
Sbjct: 301 FSTRKID-----MVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVV 355
Query: 707 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 766
+G++N+ +L +V ++L ++ RI+ L SI + +E+ +G F +PA +
Sbjct: 356 IGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNAATELGIILIGYFTLVPAIQ 415
Query: 767 VFSMFAALAVLLDFLLQITAFVALIVFDFLRAE----DKRV---DCIPCLK 810
F +FA + ++ DF LQ+ F ++ D R E +KR+ C+P K
Sbjct: 416 EFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPESCLPSAK 466
>sp|Q12770|SCAP_HUMAN Sterol regulatory element-binding protein cleavage-activating
protein OS=Homo sapiens GN=SCAP PE=1 SV=4
Length = 1279
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 120/242 (49%), Gaps = 19/242 (7%)
Query: 588 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYIS 646
+ F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI
Sbjct: 243 YHAKFLGSLRARLMLLHPSPNCSL--RAESLVHVHFKEEIGVAELIPLVTTYIILFAYIY 300
Query: 647 LTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 706
+ + SK L L+ VV V+ S+L SVG + G+ TL E+ P+LV+
Sbjct: 301 FSTRKID-----MVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVV 355
Query: 707 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 766
+G++N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA +
Sbjct: 356 IGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQ 415
Query: 767 VFSMFAALAVLLDFLLQITAFVALIVFDFLRAE----DKRVDCIPCLKLSSSYADSDKGI 822
F +FA + ++ DF LQ+ F ++ D R E +KR+ CL S K +
Sbjct: 416 EFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACLP-------SAKPV 468
Query: 823 GQ 824
GQ
Sbjct: 469 GQ 470
>sp|Q5MNU5|SCAP_PIG Sterol regulatory element-binding protein cleavage-activating
protein OS=Sus scrofa GN=SCAP PE=2 SV=2
Length = 1279
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 588 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYIS 646
+ F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI
Sbjct: 243 YHAKFLGSLRARLMLLHPSPNCSL--RAESLVHVHFKEEIGIAELIPLVTTYIILFAYIY 300
Query: 647 LTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 706
+ + SK L L+ VV V+ S+L SVG + G+ TL E+ P+LV+
Sbjct: 301 FSTRKID-----MVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVV 355
Query: 707 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 766
+G++N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA +
Sbjct: 356 IGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQ 415
Query: 767 VFSMFAALAVLLDFLLQITAFVALIVFDFLRAE----DKRVDCIPCL 809
F +FA + ++ DF LQ+ F ++ D R E +KR+ CL
Sbjct: 416 EFCLFAVVGLVSDFFLQMPFFTTVLSIDIRRMELADLNKRLPPEACL 462
>sp|A2RRU4|SCAP_RAT Sterol regulatory element-binding protein cleavage-activating
protein OS=Rattus norvegicus GN=Scap PE=2 SV=1
Length = 1276
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 588 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYIS 646
+ F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI
Sbjct: 243 YHAKFLSSLRARLMLLHPSPNCSL--RAENLVHVHFKEEIGIAELIPLVTTYIILFAYIY 300
Query: 647 LTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 706
+ + SK L L+ VV V+ S+L SVG + G+ TL E+ P+LV+
Sbjct: 301 FSTRKID-----MVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVV 355
Query: 707 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 766
+G++N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA +
Sbjct: 356 IGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFTLVPAIQ 415
Query: 767 VFSMFAALAVLLDFLLQITAFVALIVFDFLRAE----DKRV---DCIPCLKLSSSYADSD 819
F +FA + ++ DF LQ+ F ++ D R E +KR+ C+P K A +
Sbjct: 416 EFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPESCLPSAKPVGRPARYE 475
Query: 820 KGIGQR 825
+ + R
Sbjct: 476 RQLAVR 481
>sp|A6QM06|SCAP_BOVIN Sterol regulatory element-binding protein cleavage-activating
protein OS=Bos taurus GN=SCAP PE=2 SV=1
Length = 1278
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 172/397 (43%), Gaps = 42/397 (10%)
Query: 433 APFYRIEELILATIPDTTHGNLPSI-VTESNIKLLFEIQKKIDGLRANYSGSMISLTDIC 491
AP I+++ + + H NL ++ V S + F++ ++I S SL D+C
Sbjct: 88 APVAYIQQIFVKSSVSPWHKNLLAVDVFRSPLSRAFQLVEEIRNHVLKDSSGTRSLEDVC 147
Query: 492 MKPLG--------------QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESC 537
++ C S +++ D + F + ++ QH T
Sbjct: 148 LQVTDLLPGLRKLRNLLPEHGCLLLSPGNFWQNDRERF--HADPDIIRTIHQHEPKTLQT 205
Query: 538 MSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAK 597
+ K L G G YS S + V+ + T + F+ +
Sbjct: 206 SATLK------DLLFGVPGK-YSGVSLYTRKRLVSYTI------TLVFQHYHAKFLGSLR 252
Query: 598 DELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLGDTPHLS 656
L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 253 ARLMLLHPSPNCSL--RAESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTRKID--- 307
Query: 657 SFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 716
+ SK L L+ VV V+ S+L SVG + G+ TL E+ P+LV+ +G++N+ +L
Sbjct: 308 --MVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLT 365
Query: 717 HAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAV 776
+V ++L ++ RI+ L SI +E+ +G F +PA + F +FA + +
Sbjct: 366 KSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIVLIGYFTLVPAIQEFCLFAVVGL 425
Query: 777 LLDFLLQITAFVALIVFDFLRAE----DKRVDCIPCL 809
+ DF LQ+ F ++ D R E +KR+ CL
Sbjct: 426 VSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACL 462
>sp|P97260|SCAP_CRIGR Sterol regulatory element-binding protein cleavage-activating
protein OS=Cricetulus griseus GN=SCAP PE=1 SV=1
Length = 1276
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 588 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYIS 646
+ F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI
Sbjct: 243 YHAKFLSSLRARLMLLHPSPNCSL--RAENLVHVHFKEEIGIAELIPLVTTYIILFAYIY 300
Query: 647 LTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 706
+ + SK L L+ VV V+ S+L SVG + G+ TL E+ P+LV+
Sbjct: 301 FSTRKID-----MVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVV 355
Query: 707 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 766
+G++N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA +
Sbjct: 356 IGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFTLVPAIQ 415
Query: 767 VFSMFAALAVLLDFLLQITAFVALIVFDFLRAE----DKRV---DCIPCLKLSSSYADSD 819
F +FA + ++ DF LQ+ F ++ D R E +KR+ C+P K A +
Sbjct: 416 EFCLFAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNKRLPPESCLPSAKPVGRPARYE 475
Query: 820 KGIGQR 825
+ + R
Sbjct: 476 RQLAVR 481
>sp|P18502|PTC_DROME Protein patched OS=Drosophila melanogaster GN=ptc PE=2 SV=2
Length = 1286
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 162/367 (44%), Gaps = 71/367 (19%)
Query: 572 NNAVDREGNETKKAV----AWEKAFVQLAKDELLPMVQSK---NLTLAFSSESSIEEELK 624
N V G +KA AW++ F + + E L QS+ N + S +++++ L
Sbjct: 365 NYKVHHLGWTQEKAAEVLNAWQRNFSR--EVEQLLRKQSRIATNYDIYVFSSAALDDILA 422
Query: 625 RESTADAITIVI--SYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSV 682
+ S A++IVI + V++A+ +L P + + +G++GV+L+ S +
Sbjct: 423 KFSHPSALSIVIGVAVTVLYAFCTLLRWRDP------VRGQSSVGVAGVLLMCFSTAAGL 476
Query: 683 GFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAV----KRQQLELPLETRISNALVE 738
G + +G+ +V+PFL L +GVD++ +L A +R+Q +L L+ +
Sbjct: 477 GLSALLGIVFNAASTQVVPFLALGLGVDHIFMLTAAYAESNRREQTKLILK--------K 528
Query: 739 VGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRA 798
VGPSI ++ S +F +FIP+PA +VF + AA+ + + + F A+I D R
Sbjct: 529 VGPSILFSACSTAGSFFAAAFIPVPALKVFCLQAAIVMCSNLAAALLVFPAMISLDLRRR 588
Query: 799 EDKRVD----CIPCLKLSSSYA------DSDKGIGQRKPG-------------------- 828
R D C P K A +++ G G R P
Sbjct: 589 TAGRADIFCCCFPVWKEQPKVAPPVLPLNNNNGRGARHPKSCNNNRVPLPAQNPLLEQRA 648
Query: 829 ------------LLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK 876
LA + + + L VK + F+A ++S+ TR++ GL+
Sbjct: 649 DIPGSSHSLASFSLATFAFQHYTPFLMRSWVKFLTVMGFLAALISSLYASTRLQDGLDII 708
Query: 877 IVLPRDS 883
++P+DS
Sbjct: 709 DLVPKDS 715
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Query: 1103 FPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLM 1162
+P + ++++EQY+ + + + LA + A V+ + S W++ +++L + + +
Sbjct: 937 YPSGIPFIFWEQYMTLRSSLAMILACVLLAALVLVSLLLLSVWAAVLVILSVLASLAQIF 996
Query: 1163 GVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFS 1222
G M +L I+L+A+ V L+++VG+ + F V I+ F S G++ +R++ ++ +
Sbjct: 997 GAMTLLGIKLSAIPAVILILSVGMMLCFNVLISLGFMTSVGNRQRRVQLSMQMSLGPLVH 1056
Query: 1223 GITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPSRCMLV 1282
G+ LT V V +L S E + ++ + L ++ +G + L+ P++LS+ GP + + +
Sbjct: 1057 GM-LTSGVAVFMLSTSPFEFVIRHFCWLLLVVLCVGACNSLLVFPILLSMVGPEAELVPL 1115
Query: 1283 ERQEERPSVSSL 1294
E + + S L
Sbjct: 1116 EHPDRISTPSPL 1127
>sp|A0JPH4|SCAP_XENLA Sterol regulatory element-binding protein cleavage-activating
protein OS=Xenopus laevis GN=scap PE=2 SV=1
Length = 1311
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 13/221 (5%)
Query: 605 QSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLGDTPHLSSFYISSK 663
Q + + +S+ + K E A+ I +V +Y+++FAYI + + SK
Sbjct: 256 QHPSTNSSAASQHIVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTRKID-----LVKSK 310
Query: 664 VLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ 723
L L+ VV V+ S+L SVG + G+ TL E+ P+LV+ +G++N+ +L +V
Sbjct: 311 WGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTP 370
Query: 724 LELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQ 783
++L ++ RI+ L I +E+ +G F +PA + F +FA + ++ DF LQ
Sbjct: 371 VDLEVKLRIAQGLRNESWFIMKNMATELGIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQ 430
Query: 784 ITAFVALIVFDFLRAE----DKRVD---CIPCLKLSSSYAD 817
+ F ++ D R E +KR+ CIP K + D
Sbjct: 431 MFFFTTVLSIDIRRMELADLNKRIPAEACIPPPKPGAKRYD 471
>sp|Q3KNS1|PTHD3_HUMAN Patched domain-containing protein 3 OS=Homo sapiens GN=PTCHD3 PE=1
SV=3
Length = 767
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 134/607 (22%), Positives = 232/607 (38%), Gaps = 72/607 (11%)
Query: 354 RTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVLSLSMALVLLLCLGLIRF--EVETRPE 411
R R+R ++G +S ++ G V +P + L + L L G + + E E
Sbjct: 109 RHRHRCHTDCLEGLLSRTFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLE 168
Query: 412 KLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLL----- 466
+ + GS A E+ F H F + + +T N S++ S L
Sbjct: 169 EHYTPVGSPAKAERRFVQGH---FTTNDSYRFSASRRSTEANFVSLLVVSYSDSLLDPAT 225
Query: 467 FEIQKKIDG----LR-ANYSGSMISLTDICMK------PLGQDCATQSVLQYFKMDPKNF 515
F K+DG LR A GS I +C + P V + + +F
Sbjct: 226 FAEVSKLDGAVQDLRVAREKGSQIQYQQVCARYRALCVPPNPILYAWQVNKTLNLSSISF 285
Query: 516 DDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAV 575
+ H Y ++ F G +LG G A A + Y +
Sbjct: 286 PAYNHGRHPLY-----------LTGFFGGYILGGSLG--MGQLLLRAKAMRLLYYLKTE- 331
Query: 576 DREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIV 635
D E + K Q L KN+ E L R+ +A ++
Sbjct: 332 DPEYDVQSK---------QWLTHLLDQFTNIKNILALKKIEVVHFTSLSRQLEFEATSVT 382
Query: 636 ISYLVMFAYISLTLGDTPHLSSFY-ISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTL 694
+ + AYI + L F I +K+ + GV+ L+V+ G IGV +
Sbjct: 383 VIPVFHLAYILIILFAVTSCFRFDCIRNKMCVAAFGVISAFLAVVSGFGLLLHIGVPFVI 442
Query: 695 IIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAF 754
I+ PFL+L VGVD+M I++ A + L + R+SN + SIT+ +++ +LA
Sbjct: 443 IVANS-PFLILGVGVDDMFIMISAWHKTNLADDIRERMSNVYSKAAVSITITTITNILAL 501
Query: 755 AVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFD---------FLRAED----- 800
G + + F ++ + +L + IT F A + D +L+ D
Sbjct: 502 YTGIMSSFRSVQCFCIYTGMTLLFCYFYNITCFGAFMALDGKREVVCLCWLKKADPKWPS 561
Query: 801 -KRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFT 859
K+ C P + + I + + ++ L+ K V+ ++V +
Sbjct: 562 FKKFCCFPFGSVPDEHGTDIHPI--------SLFFRDYFGPFLTRSESKYFVVFIYVLYI 613
Query: 860 LASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLR-IGPPLYFVV-KNYNY-SSESR 916
++SI C ++ GL+ + + DSY+ YFN + GP + +V K +Y + R
Sbjct: 614 ISSIYGCFHVQEGLDLRNLASDDSYITPYFNVEENYFSDYGPRVMVIVTKKVDYWDKDVR 673
Query: 917 QTNQLCS 923
Q + C+
Sbjct: 674 QKLENCT 680
>sp|Q03602|PTR9_CAEEL Patched-related protein 9 OS=Caenorhabditis elegans GN=ptr-9 PE=3
SV=2
Length = 844
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 1089 EFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSA 1148
E+ +V ++ Q F Y ++ +Q + ++++ AI + +C++ S+
Sbjct: 636 EYMRKVMENSQFNGFVYDTSFLLVDQQMTTVYNVIVDVVSAILTMLSICVLMVPRPVSAM 695
Query: 1149 IILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQR 1208
I + + + ++G +A +L+ +S++ +VM+VG +V++ H T F + ++ R
Sbjct: 696 CIAFAILSVNIGVIGALAATNTRLDIISMITIVMSVGFSVDYVTHTTFHFVIQ---RDNR 752
Query: 1209 MKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPV 1268
+++ L M + L+ +GV +L F + + V + +V LG LHGL+FLPV
Sbjct: 753 LEKCLLVMTEPILQS-ALSTAIGVSLLSFVHSYI-VRTFVNTVFFVVGLGILHGLIFLPV 810
Query: 1269 VLSVFGPPSRCML----VERQEERPS 1290
+L P S M+ EE P+
Sbjct: 811 LLDTIVPDSEYMVPYEPQHEDEENPN 836
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 16/196 (8%)
Query: 601 LPMVQSKNLTLAFSSESSIEEELKREST-----ADAITIVISYLVMFAYISLTLGDTPHL 655
+P + N T+ +SS S+ +E++R ++V+ MFA SL +
Sbjct: 235 IPRYKETNSTIFWSSSKSLAKEMERNGELLIPWMPWTSLVLVVFCMFACSSLNI------ 288
Query: 656 SSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCIL 715
+ S+ +G + ++ + S + L ++ ++PFLV+++G DNM ++
Sbjct: 289 ----VKSQPFIGFFAMFNATMATIASTSLLLYLQYP-FLPLVFIMPFLVVSIGTDNMFLM 343
Query: 716 VHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALA 775
+ + + + E R +AL E S+ L SL++ L+FA+GS A RVF + A+A
Sbjct: 344 LKSWRMTKKSSNEEQRYIHALTESAASLFLTSLTDGLSFAIGSISDFHAVRVFCTYCAMA 403
Query: 776 VLLDFLLQITAFVALI 791
+L FL Q+T F A++
Sbjct: 404 ILFMFLFQVTFFNAVM 419
>sp|B9EKX1|PTHD4_MOUSE Patched domain-containing protein 4 OS=Mus musculus GN=Ptchd4 PE=2
SV=2
Length = 904
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 140/656 (21%), Positives = 269/656 (41%), Gaps = 93/656 (14%)
Query: 358 RIQLSIVQGYMSNFYRKYGKWVARNPTLVLSLSMALVLLLCL-GLIRFEVETRPEKLWVG 416
R+ +++ + +F + G V+R+P L++ L + L L RF+ E E+L V
Sbjct: 17 RMLRQVLRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQTEGDLERL-VA 75
Query: 417 PGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTES----NIKL----LFE 468
P A+ + S L P + + + + + T G ++ S NI L + +
Sbjct: 76 PSHSLAKIERSLASSLFPLDQSKSQLYSDL--HTPGRYGRVILLSSPGDNILLQAEGILQ 133
Query: 469 IQKKIDGLRANYSGSMISLTDIC-MKPLGQDCATQ---SVLQYFKMDPKNFDDFGGVEHV 524
+ + ++ N+ G + + +C ++ + C SVL+ + + V+ V
Sbjct: 134 THRAVMEMKVNHKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQAAVSNKTTARVQ-V 192
Query: 525 KYCFQHYTSTESCMSAFKGPLDPSTALGGF------SGNNYSEASAFVVTYPVNNAVDRE 578
+Y T + ++F G LGG A A +TY +
Sbjct: 193 RYP---NTKLKDGRNSFIG-----HQLGGVVEVPNSKDQRVKSARAIQITYYLQTY---- 240
Query: 579 GNETKKAVA--WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 636
G+ T+ + WE F +L + + ++L L + S+ + + S +++
Sbjct: 241 GSATQDLIGEKWENEFCKLMRKL---QEEHQDLQLYSLASFSLWRDFHKTSILTRSKVLV 297
Query: 637 SYLVMF--AYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTL 694
S +++ A +S ++ D + SK LGL GV+ V +S+ + G F K
Sbjct: 298 SLVLILTTATLSSSMKDC-------LRSKPFLGLLGVLTVCISIATAAGIFFITDGKYNS 350
Query: 695 IIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAF 754
++ IPF + G + L+ +R + LP + R+++A +V + T+ S + F
Sbjct: 351 TLLG-IPFFAMGHGTKGVFELLSGWRRTKENLPFKDRVADAYSDVMVTYTMTSSLYFITF 409
Query: 755 AVGS--FIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKL- 811
+G+ F + A ++F +++LL++ + F + +VF + E R I C K+
Sbjct: 410 GMGASPFTNIEAVKIFCQNMCVSILLNYFYIFSFFGSCLVFAG-QLEQNRYHSIFCCKIP 468
Query: 812 SSSYAD-----------------SDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISL 854
S+ Y D S + + +++E + ++ VK V+ L
Sbjct: 469 SAEYLDRKPVWFQTVMSDGHQQTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVIL 528
Query: 855 FVAFTLASIALCTRIEPGLEQKIVLPRDS-------YLQGYFNNISEHLRIGPPLYFVVK 907
++ + S C +I G +L DS Q YF+N S IG +Y ++
Sbjct: 529 YLIYASFSFMGCLQISDGASIINLLASDSPSVSYAMVQQKYFSNYSP--VIGFYVYEPLE 586
Query: 908 NYNYSSESRQTNQLCS----ISQCD--------SNSLLNEISRASLIPQSSYIAKP 951
+N SS +LCS +S + SN N + + QSS++ KP
Sbjct: 587 YWN-SSVQEDLQRLCSGFTAVSWVEQYYQFLKTSNISANNKTDFISVLQSSFLKKP 641
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 121/258 (46%), Gaps = 26/258 (10%)
Query: 1031 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAR 1088
F++ L S+ K + N + G EN I+ + + T ++Q + + + R
Sbjct: 629 FISVLQSSFLKKPEFQHFRNDIIFSRAGDENNIIASRLYLVARTSRDKQKEVIEVLDKLR 688
Query: 1089 EFSSRVSDSLQMEIF-PYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLIT------- 1140
S +S S++ +F P VF ++ + + + IA V +V ++T
Sbjct: 689 PLS--LSKSIRFIVFNPSFVFTDHYS------LSVTVPVLIAGFGVLLVLILTFFLVIHP 740
Query: 1141 TCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSV 1200
+FW ++L +T I + ++G+M + + ++ +S++ L+ + A++ C + + F +
Sbjct: 741 LGNFW----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHCAPLLYTFVL 796
Query: 1201 SSGD-KNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGF 1259
++ + Q +K +L G ++ IT + L+G++ L F + + F+ L
Sbjct: 797 ATEHTRTQCIKSSLQEHGTAILQNIT-SFLIGLLPLLFVPSNL-TFTLFKCLLLTGGCTL 854
Query: 1260 LHGLVFLPVVLSVFGPPS 1277
LH V LPV L+ F PPS
Sbjct: 855 LHCFVILPVFLTFF-PPS 871
>sp|Q6ZW05|PTHD4_HUMAN Patched domain-containing protein 4 OS=Homo sapiens GN=PTCHD4 PE=2
SV=3
Length = 846
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 181/436 (41%), Gaps = 68/436 (15%)
Query: 562 ASAFVVTYPVNNAVDREGNETKKAVA--WEKAFVQLAKDELLPMVQSKNLTLAFSSESSI 619
A A +TY + G+ T+ + WE F +L + + + L L + S+
Sbjct: 170 ARAIQITYYLQTY----GSATQDLIGEKWENEFCKLIRKL---QEEHQELQLYSLASFSL 222
Query: 620 EEELKRESTADAITIVISYLVMF--AYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLS 677
+ + S +++S +++ A +S ++ D + SK LGL GV+ V +S
Sbjct: 223 WRDFHKTSILARSKVLVSLVLILTTATLSSSMKDC-------LRSKPFLGLLGVLTVCIS 275
Query: 678 VLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALV 737
++ + G F K ++ IPF + G + L+ +R + LP + RI++A
Sbjct: 276 IITAAGIFFITDGKYNSTLLG-IPFFAMGHGTKGVFELLSGWRRTKENLPFKDRIADAYS 334
Query: 738 EVGPSITLASLSEVLAFAVGS--FIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDF 795
+V + T+ S + F +G+ F + A +VF +++LL++ + F + +VF
Sbjct: 335 DVMVTYTMTSSLYFITFGMGASPFTNIEAVKVFCQNMCVSILLNYFYIFSFFGSCLVFAG 394
Query: 796 LRAEDKRVDCIPCLKL-SSSYAD-----------------SDKGIGQRKPGLLARYMKEV 837
+ E R I C K+ S+ Y D S + + +++E
Sbjct: 395 -QLEQNRYHSIFCCKIPSAEYLDRKPVWFQTVMSDGHQQTSHHETNPYQHHFIQHFLREH 453
Query: 838 HATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS-------YLQGYFN 890
+ ++ VK V+ L++ + S C +I G +L DS Q YF+
Sbjct: 454 YNEWITNIYVKPFVVILYLIYASFSFMGCLQISDGANIINLLASDSPSVSYAMVQQKYFS 513
Query: 891 NISEHLRIGPPLYFVVKNYNYSSES---------------RQTNQLCSISQCDSNSLLNE 935
N S IG +Y ++ +N S + Q Q +S +N+ +
Sbjct: 514 NYSP--VIGFYVYEPLEYWNSSVQDDLRRLCSGFTAVSWVEQYYQFLKVSNVSANNKSDF 571
Query: 936 ISRASLIPQSSYIAKP 951
IS + QSS++ KP
Sbjct: 572 IS----VLQSSFLKKP 583
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 118/254 (46%), Gaps = 18/254 (7%)
Query: 1031 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAR 1088
F++ L S+ K + N + G E+ I+ + + T ++Q + + R
Sbjct: 571 FISVLQSSFLKKPEFQHFRNDIIFSKAGDESNIIASRLYLVARTSRDKQKEITEVLEKLR 630
Query: 1089 EFSSRVSDSLQMEIFPYSVFYMYFEQY-LDIWRTALI---NLAIAIGAVFVVCLITTCSF 1144
S +S S++ +F S +M + Y L + LI + + + F + + +F
Sbjct: 631 PLS--LSKSIRFIVFNPSFVFM--DHYSLSVTVPVLIAGFGVLLVLILTFFLVIHPLGNF 686
Query: 1145 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD 1204
W ++L +T I + ++G+M + + ++ +S++ L+ + A++ C + F +++
Sbjct: 687 W----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHCAPLLFTFVLATEH 742
Query: 1205 -KNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGL 1263
+ Q +K +L G ++ +T + L+G++ L F + + F+ L LH
Sbjct: 743 TRTQCIKSSLQDHGTAILQNVT-SFLIGLVPLLFVPSNL-TFTLFKCLLLTGGCTLLHCF 800
Query: 1264 VFLPVVLSVFGPPS 1277
V LPV L+ F PPS
Sbjct: 801 VILPVFLTFF-PPS 813
>sp|Q14B62|PTHD1_MOUSE Patched domain-containing protein 1 OS=Mus musculus GN=Ptchd1 PE=2
SV=2
Length = 888
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/443 (19%), Positives = 180/443 (40%), Gaps = 50/443 (11%)
Query: 372 YRKYGKWVARNPTLVLSLSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSH 431
+ + G ++A +P S + + +LL R++VE E L S A E+ +S
Sbjct: 14 FSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNLVNS- 72
Query: 432 LAPFYRIEELILATIPD--------TTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGS 483
L P R + + + + T +++ + + L+ ++ + ++ G
Sbjct: 73 LFPVNRSKHRLYSDLQTPGRYGRVIVTSYQKANMLDQHHTDLILKLHTAVTKIQVPRPGF 132
Query: 484 MISLTDICMKPLGQDCATQSVLQYFK----MDPKNFDDFGGVEHVKYCFQHYTSTESCMS 539
+ IC+ + C ++ + N +F + Y H + +
Sbjct: 133 NYTFAHICVLNNDKTCIVDDIVHVLEELKNARATNRTNFA----ITYPITHLKDGRAVYN 188
Query: 540 AFKGPLDPSTALGG---FSGNNYSEASAFVVTYPVNNAVDREGNETKKAVA--WEKAFVQ 594
+ LGG S + A A +TY + + N VA WE +F
Sbjct: 189 GHQ--------LGGVTVHSKDRVKSAEAIQLTYYLQSI-----NSLNDMVAERWESSFCD 235
Query: 595 LAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYL--VMFAYISLTLGDT 652
K L SK ++S SS+ E+ ++ S +V S + V A + ++ D
Sbjct: 236 TVK--LFQKSNSKVKIYPYTS-SSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDC 292
Query: 653 PHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNM 712
+ SK LGL G+V + L+ L + G + G K + V PF++L G+
Sbjct: 293 -------VRSKPWLGLLGLVTISLATLTAAGIINLTGGKYNSTFLGV-PFVMLGHGLYGT 344
Query: 713 CILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS--FIPMPACRVFSM 770
++ + ++ + + ++ R + + S +L + ++ F +G+ F + A R+F
Sbjct: 345 FEMLSSWRKTREDQHVKERTAEVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCC 404
Query: 771 FAALAVLLDFLLQITAFVALIVF 793
+ +A+L ++L ++ + + +VF
Sbjct: 405 NSCIAILFNYLYVLSFYGSSLVF 427
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 1150 ILLVLTMIVVD--LMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSG-DKN 1206
+ + LT++ V+ ++G M + K++L+ +SV+ L+ + ++ C + F + +
Sbjct: 725 VWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKDFTRT 784
Query: 1207 QRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFL 1266
+ +K AL G ++ L +VG+ L + + + ++L + + F H L
Sbjct: 785 KWVKNALEVHGVAILQSY-LCYIVGLFPLAAVPSNLTCTLFRCLFL-IAFVTFFHCFAIL 842
Query: 1267 PVVLSVFGPPS 1277
PV+L+ F PPS
Sbjct: 843 PVILT-FLPPS 852
>sp|Q5RIV7|PTHD1_DANRE Patched domain-containing protein 1 OS=Danio rerio GN=ptchd1 PE=3
SV=1
Length = 897
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 205/505 (40%), Gaps = 68/505 (13%)
Query: 363 IVQGYMSNFYRKYGKWVARNPTLVLSLSMALVLLL-CLGLIRFEVETRPEKLWVGPGSRA 421
I +G ++FY G +V+R+P L++ L ++ L RF+ ET E L V P
Sbjct: 6 IHRGLKASFYW-LGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPETDLEIL-VAPTHSL 63
Query: 422 AE----------------EKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKL 465
A+ KL+ D H R LIL + GN+ + +
Sbjct: 64 AKIERSLANSLFPIDQSKHKLYSDLHTPG--RYGRLILLA---RSGGNILELAEQ----- 113
Query: 466 LFEIQKKIDGLRANYSGSMISLTDIC-MKPLGQDCATQSVLQYFKMDPKNFDDFGGVEHV 524
+ ++ KK+ +R NY G + +C ++ + C ++ F+ V
Sbjct: 114 VLQVHKKVLDMRVNYKGFNYTFAHLCVLRHRDKRCLLDDIITIFEDIRLAVLSNSTFSKV 173
Query: 525 KYCFQHYTSTESCMSAFKGPLDPSTALGGFS--GNNYSEASAFVVTYPVNNAVDREGNET 582
+ + T + +S F G LGG + NN + F + + G
Sbjct: 174 PVSYPNTTLKDGRVS-FIG-----HQLGGVALPANNRDQQVKFARAIQITYYLRNLGPVV 227
Query: 583 KKAVA--WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKREST--ADAITIVISY 638
+ +A WE F +L S+ L + + S+ + + + + +
Sbjct: 228 QDIIAEKWETEFCKLVHQL---ATDSQELHIQSLTSFSLWRDFHKTGVLAKSEVLVSLVL 284
Query: 639 LVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVG-FFSAIG-VKSTLII 696
+++ A IS ++ D + K LGL GV+ + ++ + + G FF + G STL+
Sbjct: 285 VLLAATISSSMRDC-------LRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLL- 336
Query: 697 MEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAV 756
IPF + G + L+ +R + LP + R+++A +V T+ S ++ F +
Sbjct: 337 --GIPFFAMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGM 394
Query: 757 GS--FIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSS- 813
G+ F + + +VF +AVL+++ + + + +VF + E R + C K+ S
Sbjct: 395 GASPFTNIESVKVFCQSMCVAVLVNYFYVFSFYGSCLVFAG-QLEQNRYHSVFCCKIPSV 453
Query: 814 SYADSDKGIGQRKPGLLARYMKEVH 838
Y D R+P M + H
Sbjct: 454 EYLD-------RQPTWFKTMMSDGH 471
Score = 41.6 bits (96), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 1115 YLDIWRTALINLAIAIGAVFVVCLITTC--------SFWSSAIILLVLTMIVVDLMGVMA 1166
++D + +++I+ + G + LI T +FW ++L +T + + ++G+M
Sbjct: 690 FMDRYSSSIISPILTSGFSVLTILILTFFLVINPLGNFW----LILTVTSVELGVLGLMT 745
Query: 1167 ILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD-KNQRMKEALGTMGASVFSGIT 1225
+ + ++++S++ L+ + A++ C + F +++ + Q +K +L GA++ T
Sbjct: 746 LWNVDMDSISILCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQN-T 804
Query: 1226 LTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPS 1277
++G++ L F + + F+ L LH V LPV L+ F PPS
Sbjct: 805 SCFVIGIMPLLFVPSNL-TYTLFKCSLLTAGCTVLHCFVILPVFLTFF-PPS 854
>sp|Q96NR3|PTHD1_HUMAN Patched domain-containing protein 1 OS=Homo sapiens GN=PTCHD1 PE=2
SV=2
Length = 888
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/443 (19%), Positives = 179/443 (40%), Gaps = 50/443 (11%)
Query: 372 YRKYGKWVARNPTLVLSLSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSH 431
+ + G ++A +P S + + +LL R++VE E L S A E+ +S
Sbjct: 14 FSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNLVNS- 72
Query: 432 LAPFYRIEELILATIPD--------TTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGS 483
L P R + + + + T +++ + + L+ ++ + ++ G
Sbjct: 73 LFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHAAVTKIQVPRPGF 132
Query: 484 MISLTDICMKPLGQDCATQSVLQYFK----MDPKNFDDFGGVEHVKYCFQHYTSTESCMS 539
+ IC+ + C ++ + N +F + Y H + +
Sbjct: 133 NYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFA----ITYPITHLKDGRAVYN 188
Query: 540 AFKGPLDPSTALGG---FSGNNYSEASAFVVTYPVNNAVDREGNETKKAVA--WEKAFVQ 594
+ LGG S + A A +TY + + N VA WE +F
Sbjct: 189 GHQ--------LGGVTVHSKDRVKSAEAIQLTYYLQSI-----NSLNDMVAERWESSFCD 235
Query: 595 LAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYL--VMFAYISLTLGDT 652
+ L SK ++S SS+ E+ ++ S +V S + V A + ++ D
Sbjct: 236 TVR--LFQKSNSKVKMYPYTS-SSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDC 292
Query: 653 PHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNM 712
+ SK LGL G+V + L+ L + G + G K + V PF++L G+
Sbjct: 293 -------VRSKPWLGLLGLVTISLATLTAAGIINLTGGKYNSTFLGV-PFVMLGHGLYGT 344
Query: 713 CILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS--FIPMPACRVFSM 770
++ + ++ + + ++ R + + S +L + ++ F +G+ F + A R+F
Sbjct: 345 FEMLSSWRKTREDQHVKERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCC 404
Query: 771 FAALAVLLDFLLQITAFVALIVF 793
+ +A+ ++L ++ + + +VF
Sbjct: 405 NSCIAIFFNYLYVLSFYGSSLVF 427
Score = 42.0 bits (97), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 1150 ILLVLTMIVVD--LMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSG-DKN 1206
+ + LT++ V+ ++G M + K++L+ +SV+ L+ + ++ C + F + +
Sbjct: 725 VWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPMLSTFVLGKDFTRT 784
Query: 1207 QRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFL 1266
+ +K AL G ++ L +VG+I L + + + ++L + + F H L
Sbjct: 785 KWVKNALEVHGVAILQSY-LCYIVGLIPLAAVPSNLTCTLFRCLFL-IAFVTFFHCFAIL 842
Query: 1267 PVVLSVFGPPS 1277
PV+L+ F PPS
Sbjct: 843 PVILT-FLPPS 852
>sp|Q6R5J2|DISP1_DANRE Protein dispatched homolog 1 OS=Danio rerio GN=disp1 PE=2 SV=1
Length = 1464
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 1069 TYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWR-------T 1121
TYH L Y + RE + + + L+ P + Y +F L+ +
Sbjct: 912 TYHFTL----AYEKMHQFYREVDTWIQEELRDA--PEGLSYGWFVSNLEFYDLQDSLSDG 965
Query: 1122 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 1181
LI +A+++ F V L+TT + S ++ + + +G + +L +LN + V +
Sbjct: 966 TLIAMALSVVVAFSVMLLTTWNIIISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTIS 1025
Query: 1182 MAVGIAVEFCVHITHAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRT 1240
+AVG++V+F VH A+ ++ D+ ++ +L MG+++ T + G +++ +
Sbjct: 1026 VAVGLSVDFAVHYGVAYRLAPEPDREGKVVFSLSRMGSAIAMAALTTFVAGAMMM---PS 1082
Query: 1241 EVFVVYYFQMYLALVL-LGFLHGLVFLPVVLSVFGPPSRC 1279
V +L L++ + + F + + GP C
Sbjct: 1083 TVLAYTQLGTFLMLIMCISWAFATFFFQCMCRLLGPQGTC 1122
>sp|Q3TDN0|DISP1_MOUSE Protein dispatched homolog 1 OS=Mus musculus GN=Disp1 PE=1 SV=2
Length = 1521
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 1123 LINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVM 1182
LI + +++ F V L+TT + S ++ + + +G + +L +LN + V + +
Sbjct: 983 LIAMGLSVAVAFSVMLLTTWNIIISLYAIVSIAGTIFVTVGSLVLLGWELNVLESVTISV 1042
Query: 1183 AVGIAVEFCVHITHAFSVSSG-DKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 1241
AVG++V+F VH A+ ++ D+ ++ +L MG+++ T + G +++ +
Sbjct: 1043 AVGLSVDFAVHYGVAYRLAPDPDREGKVIFSLSRMGSAIAMAALTTFVAGAMMM---PST 1099
Query: 1242 VFVVYYFQMYLALVL-LGFLHGLVFLPVVLSVFGPPSRC 1279
V ++ LV+ + + F + GP C
Sbjct: 1100 VLAYTQLGTFMMLVMCVSWAFATFFFQCLCRCLGPQGTC 1138
>sp|Q9Y7D2|HMDH_ASPTE 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Aspergillus
terreus PE=3 SV=2
Length = 1048
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 166/446 (37%), Gaps = 106/446 (23%)
Query: 614 SSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSS-FYISSKVLLGLSGVV 672
SS S + T D + I +SYL M + HL S F++++ VLL
Sbjct: 206 SSWLSFLHRVHHAETVDLVIIGLSYLAMNMTVVSLFRVMRHLGSRFWLAASVLLS----- 260
Query: 673 LVMLSVLGSVGFFSAIGVKST-------LIIMEVIPFLVLAVGVDNMCILVHAV------ 719
G+ F +G+ +T L++ E IP+LVL VG + L AV
Sbjct: 261 -------GAFAFVLGLGITTTCDVPVDMLLLFEGIPYLVLTVGFEKPIQLTRAVLCVSEE 313
Query: 720 -----------------KRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFI-P 761
RQ +P I A+ G I + L E+ A A+G+ + P
Sbjct: 314 LWGGGQRQVPNGASSDDSRQNQLIP--NIIQLAVDREGWYIVRSYLLEIGALALGAVLRP 371
Query: 762 MPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKG 821
+ F AA +L+D +L T + ++ C+KL + S G
Sbjct: 372 KDSLGHFCFLAAWTLLIDAVLLFTFYATIL----------------CVKLEITRIRSPGG 415
Query: 822 IGQ---RKP-GLLARYMKEVHATILSLWGVKIAVISLFVAFT----------LASIAL-C 866
+GQ + P G+ +K + T L V V+ F+ + +A+ L
Sbjct: 416 LGQVNAKHPSGIFGHKVKSTNITWWKLLTVGGFVLCHFLQLSPFFYRVMGEYMANGTLPP 475
Query: 867 TRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKN--YNYSSESRQT------ 918
T + P E L + YL + + PPL +V+++ +N S+ R T
Sbjct: 476 TAVSPFKEAANGL-NEIYLTARVEGFETRVTVLPPLQYVLESAGFNISATKRSTFDGVLD 534
Query: 919 ------NQLCSISQCDSNSLLN----EISRASLIPQSSYIAKPAASWLDDFLVWISPEAF 968
+LC + + +LN +R PQ+ A P S+L +PE
Sbjct: 535 GLESPLGRLCLMGALVVSLVLNNHLIHAARWHAWPQARESAVPDGSYLSVPCSATAPEV- 593
Query: 969 GCCRKFTNGSYCPPDDQPPCCPSGQS 994
C R PP++ S Q+
Sbjct: 594 -CTR--------PPEETEALLKSNQA 610
>sp|P14773|HMDH_DROME 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Drosophila
melanogaster GN=Hmgcr PE=2 SV=2
Length = 920
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 627 STADAI--TIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGF 684
+ AD I TIV V++ Y S + SK +LG++G+ V S + +
Sbjct: 103 NAADVILMTIVRCTAVLYCYYQFC-------SLHRLGSKYVLGIAGLFTVFSSFIFTTAI 155
Query: 685 FSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSIT 744
+G + + + + FL+L + + N L + + I+ L +GP+I+
Sbjct: 156 IKFLGSDISEL-KDALFFLLLVIDLSNSGRLAQLALSGSNQAEVTQNIARGLELLGPAIS 214
Query: 745 LASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVAL--IVFDFLRA 798
L ++ EVL VG+ + V MFA L+VL+++++ +T + A ++FD R+
Sbjct: 215 LDTIVEVLLVGVGTLSGVQRLEVLCMFAVLSVLVNYVVFMTFYPACLSLIFDLSRS 270
>sp|O42335|PTC1_CYNPY Protein patched homolog 1 (Fragment) OS=Cynops pyrrhogaster GN=PTC1
PE=2 SV=1
Length = 257
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 580 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 636
NE K A AW++ +V++ + P S L+F++ +++++ LK S I +
Sbjct: 151 NEDKAAAILEAWQRMYVEVVHQSV-PQ-NSTQKVLSFTT-TTLDDILKSFSDISVIRVAS 207
Query: 637 SYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGV 690
YL+M AY LT+ L S+ +GL+GV+LV LSV +G S IG+
Sbjct: 208 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGI 256
>sp|A3KFU9|PTHD2_MOUSE Patched domain-containing protein 2 OS=Mus musculus GN=Ptchd2 PE=2
SV=1
Length = 1347
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 600 LLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFY 659
+L + + + + + E++R D + IS + A + + + LS F
Sbjct: 387 MLAKQSTSKVQVLYGGTDLFDYEVRRTFNNDMLLAFISSSCIAALVYILTSCSVFLSFFG 446
Query: 660 ISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAV 719
I+S +GLS +V + L + G++ I+ V F+++ +GVD++ + ++
Sbjct: 447 IAS---IGLSCLVALFL-------YHVVFGIQYLGILNGVAAFVIVGIGVDDVFVFINTY 496
Query: 720 KR-QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAV 776
++ LE P + R+ + + G + SL+ A+A F +PA F +F +L V
Sbjct: 497 RQATHLEDP-QLRMIHTIQTAGKATFFTSLTTAAAYAANVFSQIPAVHDFGLFMSLIV 553
Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 35/115 (30%)
Query: 1135 VVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHI 1194
+VCL+ T +WS ++ AV ++L + VG +V++CVH+
Sbjct: 1173 IVCLVVTIMYWSG----------------------WEMGAVEAISLSILVGSSVDYCVHL 1210
Query: 1195 THAFSVS------------SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 1237
+ ++ S + R EA+ +G ++ S LT ++ + L F
Sbjct: 1211 VEGYLLAGENLPPQLSQDPSSQRQWRTLEAVRHVGVAIVSS-ALTTVIATVPLFF 1264
>sp|Q96F81|DISP1_HUMAN Protein dispatched homolog 1 OS=Homo sapiens GN=DISP1 PE=2 SV=3
Length = 1524
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 1123 LINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVM 1182
LI + +++ F V L+TT + S ++ + + +G + +L +LN + V + +
Sbjct: 985 LIAMGLSVAVAFSVMLLTTWNIIISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTISV 1044
Query: 1183 AVGIAVEFCVHITHAFSVSSG-DKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 1241
AVG++V+F VH A+ ++ D+ ++ +L +G+++ T + G +++ +
Sbjct: 1045 AVGLSVDFAVHYGVAYRLAPDPDREGKVIFSLSRVGSAMAMAALTTFVAGAMMM---PST 1101
Query: 1242 VFVVYYFQMYLALVL-LGFLHGLVFLPVVLSVFGPPSRC 1279
V ++ L++ + + F + GP C
Sbjct: 1102 VLAYTQLGTFMMLIMCISWAFATFFFQCMCRCLGPQGTC 1140
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 616 ESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLV- 674
S ++ L ++ AI IVI LVM Y S +I+ + + ++V
Sbjct: 493 HSLFQDYLLMDTVYPAIAIVIVLLVMCVYT----------KSMFITLMTMFAIISSLIVS 542
Query: 675 --MLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELP-LETR 731
+ V+ FF + + + +I+ + +G D+ +L + + P ET
Sbjct: 543 YFLYRVVFHFEFFPFMNLTALIIL--------VGIGADDAFVLCDVWNYTKFDKPHAETS 594
Query: 732 --ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVA 789
+S L S+ + S + AF + A R F ++A A+L++++L +T A
Sbjct: 595 ETVSITLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVNYVLMVTWLPA 654
Query: 790 LIVF 793
++V
Sbjct: 655 VVVL 658
>sp|Q9P2K9|PTHD2_HUMAN Patched domain-containing protein 2 OS=Homo sapiens GN=PTCHD2 PE=2
SV=2
Length = 1392
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 622 ELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGS 681
E++R D + IS + A + + + LS F I+S +GLS +V + L
Sbjct: 454 EVRRTFNNDMLLAFISSSCIAALVYILTSCSVFLSFFGIAS---IGLSCLVALFL----- 505
Query: 682 VGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR-QQLELPLETRISNALVEVG 740
+ G++ I+ V F+++ +GVD++ + ++ ++ LE P + R+ + + G
Sbjct: 506 --YHVVFGIQYLGILNGVAAFVIVGIGVDDVFVFINTYRQATHLEDP-QLRMIHTVQTAG 562
Query: 741 PSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAV 776
+ SL+ A+A F +PA F +F +L V
Sbjct: 563 KATFFTSLTTAAAYAANVFSQIPAVHDFGLFMSLIV 598
>sp|A7Z064|HMDH_BOVIN 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Bos taurus
GN=HMGCR PE=2 SV=2
Length = 888
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 628 TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSA 687
++D I + I+ + YI + L S YI LG++G+ + S + FS
Sbjct: 59 SSDIIILTITRCIAILYIYFQFQNLRQLGSKYI-----LGIAGLFTIFSSFV-----FST 108
Query: 688 IGV----KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSI 743
+ + K + E +PF +L V + L + + I+ + +GP+
Sbjct: 109 VVIHFLDKELTGLNEALPFFLLLVDLSRASALAKFALSSNSQDEVRENIARGMAILGPTF 168
Query: 744 TLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALI 791
TL +L E L VG+ + + F ++VL ++ + +T F A +
Sbjct: 169 TLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACV 216
>sp|Q0C8L9|HMDH_ASPTN 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_09965
PE=3 SV=1
Length = 1048
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 166/444 (37%), Gaps = 102/444 (22%)
Query: 614 SSESSIEEELKRESTADAITIVISYLVM-FAYISLTLGDTPHLSSFYISSKVLLGLSGVV 672
SS S +K T D + I +SYL M +SL S F++++ VLL
Sbjct: 206 SSWLSFLHRVKHAETVDLVIIGLSYLAMNMTVVSLFRVMRQLGSRFWLATSVLLS----- 260
Query: 673 LVMLSVLGSVGFFSAIGVKST-------LIIMEVIPFLVLAVGVDNMCILVHAV------ 719
G+ F +G+ +T L++ E IP+LVL VG + L AV
Sbjct: 261 -------GAFAFVLGLGITTTCDVPVDMLLLFEGIPYLVLTVGFEKPIQLTRAVLCVSEE 313
Query: 720 KRQQLELPLETRISN---------------ALVEVGPSITLASLSEVLAFAVGSFI-PMP 763
R + P+ S+ A+ G I + L E+ A A+G+ + P
Sbjct: 314 LRGGWQRPVPNGASSDDSRQSQLIPNIIQLAVDREGWYIVRSYLLEIGALALGAVLRPND 373
Query: 764 ACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 823
+ F AA +L+D +L T + ++ C+KL + S G+G
Sbjct: 374 SLGHFCFLAAWTLLIDAILLFTFYATIL----------------CVKLEITRIRSPGGLG 417
Query: 824 Q---RKP-GLLARYMKEVHATILSLWGVKIAVISLFVAFT----------LASIAL-CTR 868
Q + P G+ +K + T L V V+ F+ + +A+ L T
Sbjct: 418 QVNAKHPSGIFGHKVKSTNITWWKLLTVGGFVLCHFLQLSPFFYRVMGEYMANGTLPPTA 477
Query: 869 IEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKN--YNYSSESRQT-------- 918
+ P E L + YL + + PPL + +++ +N S+ R T
Sbjct: 478 VSPFKEAANGL-NEIYLTARVEGFETRVTVLPPLQYALESAGFNISATKRSTFDGVLDGL 536
Query: 919 ----NQLCSISQCDSNSLLN----EISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGC 970
+LC + + +LN +R PQ+ A P S L +PE C
Sbjct: 537 ESPLGRLCLMGALVVSLVLNNHLIHAARWHAWPQARESAVPDGSSLSVPCSATAPEV--C 594
Query: 971 CRKFTNGSYCPPDDQPPCCPSGQS 994
R PP++ S Q+
Sbjct: 595 TR--------PPEETEALLKSNQA 610
>sp|Q6R5J1|DISP2_DANRE Protein dispatched homolog 2 OS=Danio rerio GN=disp2 PE=2 SV=1
Length = 1476
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 1147 SAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVS-SGDK 1205
S + + + V +G++ +L+ QLN V + + A G++V+F + ++S++ D+
Sbjct: 1022 SVYVSIAVAGSVFATVGLLVLLEWQLNGVEALFISAAAGLSVDFVANYCISYSLAPHSDR 1081
Query: 1206 NQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVF 1265
R+ ++ MG V +G VG+I+L + + F + + V GF F
Sbjct: 1082 LGRVAHSIKRMGCPVATGAGAYFCVGIIMLPATALLFRKLGIFLLLVKCVACGF--ATFF 1139
Query: 1266 LPVVLSVFGPPSRC 1279
+ FGP + C
Sbjct: 1140 FQSLCCFFGPQNNC 1153
>sp|P04035|HMDH_HUMAN 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Homo sapiens
GN=HMGCR PE=1 SV=1
Length = 888
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 628 TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSA 687
++D I + I+ + YI + L S YI LG++G+ + S + FS
Sbjct: 59 SSDIIILTITRCIAILYIYFQFQNLRQLGSKYI-----LGIAGLFTIFSSFV-----FST 108
Query: 688 IGV----KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSI 743
+ + K + E +PF +L + + L + + I+ + +GP+
Sbjct: 109 VVIHFLDKELTGLNEALPFFLLLIDLSRASTLAKFALSSNSQDEVRENIARGMAILGPTF 168
Query: 744 TLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALI 791
TL +L E L VG+ + + F ++VL ++ + +T F A +
Sbjct: 169 TLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACV 216
>sp|O42334|PTC2_CYNPY Protein patched homolog 2 (Fragment) OS=Cynops pyrrhogaster GN=PTC2
PE=2 SV=1
Length = 255
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 588 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISL 647
W++ FV+LA+ S + AFS+ +++ + +K S I + YL+M AY +
Sbjct: 160 WQRKFVELAQQSAPE--NSSQIIHAFST-TTLNDIMKSFSDVSVIRVAGGYLLMLAYACV 216
Query: 648 TLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGV 690
T+ L S+ +GL+GV+LV LSV +G S +G+
Sbjct: 217 TM-----LRWDCTKSQGAVGLAGVLLVALSVASGLGLCSLLGI 254
>sp|Q5R6N3|HMDH_PONAB 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Pongo abelii
GN=HMGCR PE=2 SV=1
Length = 888
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 628 TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSA 687
++D I + I+ + YI + L S YI LG++G+ + S + FS
Sbjct: 59 SSDIIILTITRCIAILYIYFQFQNLRQLGSKYI-----LGIAGLFTIFSSFV-----FST 108
Query: 688 IGV----KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSI 743
+ + K + E +PF +L + + L + + I+ + +GP+
Sbjct: 109 VVIHFLDKELTGLNEALPFFLLLIDLSRASTLAKFALSSNSQDEVRENIARGMAILGPTF 168
Query: 744 TLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALI 791
TL +L E L VG+ + + F ++VL ++ + +T F A +
Sbjct: 169 TLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACV 216
>sp|Q29512|HMDH_RABIT 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Oryctolagus
cuniculus GN=HMGCR PE=3 SV=1
Length = 888
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 628 TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSA 687
++D I + I+ + YI + L S YI LG++G+ + S + FS
Sbjct: 59 SSDIIILTITRCIAILYIYFQFQNLRQLGSKYI-----LGIAGLFTIFSSFV-----FST 108
Query: 688 IGV----KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSI 743
+ + K + E +PF +L + + L + + I+ + +GP+
Sbjct: 109 VVIHFLDKELTGLNEALPFFLLLIDLSRASALAKFALSSNSQDEVRENIARGMAILGPTF 168
Query: 744 TLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALI 791
TL +L E L VG+ + + F ++VL ++ + +T F A +
Sbjct: 169 TLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACV 216
>sp|P09610|HMDH_MESAU 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Mesocricetus
auratus GN=HMGCR PE=1 SV=1
Length = 887
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 628 TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSA 687
++D I + I+ + YI + L S YI LG++G+ + S + FS
Sbjct: 59 SSDIIILTITRCIAILYIYFQFQNLRQLGSKYI-----LGIAGLFTIFSSFV-----FST 108
Query: 688 IGV----KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSI 743
+ + K + E +PF +L + + L + + I+ + +GP+
Sbjct: 109 VVIHFLDKELTGLNEALPFFLLLIDLSRASALAKFALSSNSQDEVRENIARGMAILGPTF 168
Query: 744 TLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALI 791
TL +L E L VG+ + + F ++VL ++ + +T F A +
Sbjct: 169 TLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACV 216
>sp|P00347|HMDH_CRIGR 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Cricetulus
griseus GN=HMGCR PE=1 SV=1
Length = 887
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 628 TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSA 687
++D I + I+ + YI + L S YI LG++G+ + S + FS
Sbjct: 59 SSDIIILTITRCIAILYIYFQFQNLRQLGSKYI-----LGIAGLFTIFSSFV-----FST 108
Query: 688 IGV----KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSI 743
+ + K + E +PF +L + + L + + I+ + +GP+
Sbjct: 109 VVIHFLDKELTGLNEALPFFLLLIDLSRASALAKFALSSNSQDEVRENIARGMAILGPTF 168
Query: 744 TLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALI 791
TL +L E L VG+ + + F ++VL ++ + +T F A +
Sbjct: 169 TLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACV 216
>sp|Q01237|HMDH_MOUSE 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Mus musculus
GN=Hmgcr PE=2 SV=3
Length = 887
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 628 TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSA 687
++D I + I+ + YI + L S YI LG++G+ + S + FS
Sbjct: 59 SSDIIILTITRCIAILYIYFQFQNLRQLGSKYI-----LGIAGLFTIFSSFV-----FST 108
Query: 688 IGV----KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSI 743
+ + K + E +PF +L + + L + + I+ + +GP+
Sbjct: 109 VVIHFLDKELTGLNEALPFFLLLIDLSRASALAKFALSSNSQDEVRENIARGMAILGPTF 168
Query: 744 TLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALI 791
TL +L E L VG+ + + F ++VL ++ + +T F A +
Sbjct: 169 TLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACV 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,269,333
Number of Sequences: 539616
Number of extensions: 18378549
Number of successful extensions: 59540
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 59202
Number of HSP's gapped (non-prelim): 212
length of query: 1294
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1165
effective length of database: 121,958,995
effective search space: 142082229175
effective search space used: 142082229175
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 67 (30.4 bits)