Query 000767
Match_columns 1294
No_of_seqs 347 out of 2897
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 15:57:09 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000767.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_539-543//hhsearch_pdb/000767hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qnt_A Niemann-PICK C1-like pr 1.0 1 1 556.1 13.8 235 44-285 5-263 (265)
2 3gkj_A Niemann-PICK C1 protein 1.0 1 1 532.5 8.2 214 50-268 2-231 (232)
3 2v50_A Multidrug resistance pr 1.0 1 1 332.1 36.9 607 605-1277 317-1031(1052)
4 4dx5_A Acriflavine resistance 1.0 1 1 328.1 46.6 604 606-1277 318-1033(1057)
5 3ne5_A Cation efflux system pr 1.0 1 1 325.7 31.6 601 606-1276 323-1048(1054)
6 3aqp_A Probable secdf protein- 1.0 1 1 301.8 39.1 471 606-1280 251-730 (741)
7 2v50_A Multidrug resistance pr 1.0 1 1 178.2 18.7 176 606-798 851-1031(1052)
8 4dx5_A Acriflavine resistance 1.0 1 1 172.4 21.8 178 605-799 851-1034(1057)
9 3ne5_A Cation efflux system pr 1.0 1 1 166.2 13.2 178 605-798 857-1049(1054)
10 3aqp_A Probable secdf protein- 1.0 1 1 159.8 19.3 174 607-798 551-727 (741)
No 1
>3qnt_A Niemann-PICK C1-like protein 1; cholesterol transport protein, transport protein; HET: NAG; 2.83A {Homo sapiens}
Probab=1.00 E-value=1 Score=556.08 Aligned_cols=235 Identities=32% Similarity=0.623 Sum_probs=212.1
Q ss_pred CCCCCCCCCEEECCCCCCCCC-------CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC---CC-CCCCHHHHHHHHHHH
Q ss_conf 656887767045445799989-------9845689999999999256889983198998---99-889988899999999
Q 000767 44 GEVKHVEEFCAMYDICGARSD-------RKVLNCPYNIPSVKPDDLLSSKVQSLCPTIT---GN-VCCTEDQFDTLRTQV 112 (1294)
Q Consensus 44 ~~~~~~~~~C~~~g~c~~~~~-------~~~~~c~~~~~~~~~~~~~~~~l~~~Cp~~~---~~-~CC~~~Q~~~l~~~~ 112 (1294)
.+.+|++|+|+|||+||++++ ++++||+||++|++++++++++|+++||+++ +. +|||++|+++|++||
T Consensus 5 ~~~~~~~g~C~~yg~Cg~~~~~~~~~~~~~~l~C~~n~~a~~~~~~~~~~L~~~Cp~~~~~~~~~~CC~~~Ql~~L~~nl 84 (265)
T 3qnt_A 5 YTTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTGPNTQACCSAKQLVSLEASL 84 (265)
T ss_dssp SCCCCCTTBCSEEEEEECCTTSCTTSCCCCCEEEECCCBCEECCHHHHHHHHHHSGGGCCSSSCEESCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 66756788206706668875434454679633589998587989899999998693855579888778999999999988
Q ss_pred HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC--CCCEEEEEEEEECCCCCHHHHHCCCCCCCCCCCHH
Q ss_conf 8532101489258955973010344587888643898612248--87017999999831001378521325866677825
Q 000767 113 QQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVS--NNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTR 190 (1294)
Q Consensus 113 ~~~~~~~~~CpaC~~N~~~~~C~~tCsP~Qs~F~~v~~~~~~~--~~~~V~~~~~~v~~~~~~~~y~SCk~v~~~~~~~~ 190 (1294)
++++++|+|||||++||++|||+||||||||+||+||++.+.+ ++..|+|+||||+++||+++|||||||+||+||++
T Consensus 85 ~~a~~il~rCPaC~~Nf~~lfC~~TCSP~QS~Fl~vt~t~~~~~~~~~~V~eldy~i~~~fa~~~YdSCKdV~~p~tn~~ 164 (265)
T 3qnt_A 85 SITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQLGAGQLPAVVAYEAFYQHSFAEQSYDSCSRVRVPAAATL 164 (265)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHCTTGGGTEEEEEEECCSSSSCCEEEEEEEEEEHHHHHHHHHHHTTCBCTTSSCB
T ss_pred HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 87787757491789999987548778977036264686023578876648999999877886667544207544555642
Q ss_pred HHHHCCC--CCC--CHHHHHHHHCCCCCCCCCCCCEEEEECCCCC---CCCCCCCCCCCCCCCCCC----CCCCCCCCCC
Q ss_conf 7751379--976--8898999620147899999962588427999---998854488877687899----9885566799
Q 000767 191 ALDFIGG--GAQ--NFKDWFAFIGRRAAANLPGSPYTIKFWPSAP---ELSGMIPMNVSAYSCADG----SLGCSCGDCT 259 (1294)
Q Consensus 191 am~~~gg--~a~--~~~~~~~flG~~~~~~~~~~P~~i~f~~~~~---~~~~~~~~~~~~~~C~~~----~~~CsC~dC~ 259 (1294)
|||+||| ||+ ||++||+|||+++ |++|||||||++++. .+.+|+|||..+++|||. .++|||+||+
T Consensus 165 Am~l~cG~~gA~~Cn~~~wl~flG~~~---n~~sPFqInf~~~~~~~~~~~g~~p~n~~~~~C~e~~~~~~~~CSC~DC~ 241 (265)
T 3qnt_A 165 AVGTMCGVYGSALCNAQRWLNFQGDTG---NGLAPLDITFHLLEPGQAVGSGIQPLNEGVARCNESQGDDVATCSCQDCA 241 (265)
T ss_dssp TTGGGSTTSCSSSCCHHHHHHHHTCTT---TTCCSSEEEEEEECHHHHTTSSCCCBCCCCCCTTSCCTTTCCCCCTTTCG
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHCCCC---CCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCH
T ss_conf 666306876767779999999736566---89788678742567776677776478888858888888999988566532
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 99988899999999998547406776
Q 000767 260 SSPVCSSTAPPPHKSSSCSVKMGSLN 285 (1294)
Q Consensus 260 ~~~~C~~~~~~~~~~~~~~~~~~~~~ 285 (1294)
+ +||.+|++|+.+.+ |+|++++
T Consensus 242 ~--sCp~~p~~p~~~~p--~~I~gld 263 (265)
T 3qnt_A 242 A--SCPAIARPQALDST--FYLGQMP 263 (265)
T ss_dssp G--GCCC-------------------
T ss_pred H--HCCCCCCCCCCCCC--CEEEEEE
T ss_conf 2--26999989899997--1787552
No 2
>3gkj_A Niemann-PICK C1 protein; oxysterol, cholesterol, cholesterol transfer, disease mutati endosome, glycoprotein, lysosome, membrane, transmembrane; HET: NAG HC3; 1.60A {Homo sapiens} PDB: 3gkh_A* 3gki_A*
Probab=1.00 E-value=1 Score=532.52 Aligned_cols=214 Identities=34% Similarity=0.688 Sum_probs=195.6
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC---CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 7670454457999899845689999999999256889983198998---9988998889999999985321014892589
Q 000767 50 EEFCAMYDICGARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTIT---GNVCCTEDQFDTLRTQVQQAIPFLVGCPACL 126 (1294)
Q Consensus 50 ~~~C~~~g~c~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~Cp~~~---~~~CC~~~Q~~~l~~~~~~~~~~~~~CpaC~ 126 (1294)
.++|+|||+||++++++++||+||+||++++++++++|+++||+++ +.+|||++|+++|++||++++++|+|||||+
T Consensus 2 ~~~C~~yg~Cg~~~~~~~l~C~~~~~a~~~~~~~~~~L~~~Cp~~~~~~~~~CC~~~Ql~~L~~nl~~a~~il~rCPaC~ 81 (232)
T 3gkj_A 2 AQSCVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQELCPGFFFGQVSLCCDVRQLQTLKDNLQLPLQFLSRCPSCF 81 (232)
T ss_dssp -CCCSEEEEEEEEETTEEEEEECCSCCEECCGGGHHHHHHHCGGGCSTTCEESCCHHHHHHHHHTTHHHHHHHTTCHHHH
T ss_pred CCCCEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 97205657658889996525999986878898999999986918446888877999999999998887887607682799
Q ss_pred HHHHHHCCCCCCCCCCCCCEEEEEECC----C--CCCCEEEEEEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHCC-CCC
Q ss_conf 559730103445878886438986122----4--887017999999831001378521325866677825775137-997
Q 000767 127 RNFLNLFCELTCSPNQSLFINVTSVSK----V--SNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIG-GGA 199 (1294)
Q Consensus 127 ~N~~~~~C~~tCsP~Qs~F~~v~~~~~----~--~~~~~V~~~~~~v~~~~~~~~y~SCk~v~~~~~~~~am~~~g-g~a 199 (1294)
+||++|||+|||||+||+||+||++.+ . +++..|+|+||||+++||+++|||||||+||+||++||++|| |||
T Consensus 82 ~Nf~~l~C~~TCSP~QS~Fl~vt~t~~~~d~~~~~~~~~V~ev~y~v~~~fa~~~YdSCkdV~~p~t~~~Am~l~CG~ga 161 (232)
T 3gkj_A 82 YNLLNLFCELTCSPRQSQFLQVTATEDYVDPVTNQTKTNVKELQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGKDA 161 (232)
T ss_dssp HHHHHHHHHHHHCTTHHHHEEEEEEEEEECTTTCCEEEEEEEEEEEECHHHHHHHHHHHTTCBCTTSSSBTHHHHSSSCT
T ss_pred HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
T ss_conf 99999764877897602626368513355655667765389999998778877776653075345566346776437787
Q ss_pred C--CHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCC
Q ss_conf 6--889899962014789999996258842799999885448887768789----99885566799999888999
Q 000767 200 Q--NFKDWFAFIGRRAAANLPGSPYTIKFWPSAPELSGMIPMNVSAYSCAD----GSLGCSCGDCTSSPVCSSTA 268 (1294)
Q Consensus 200 ~--~~~~~~~flG~~~~~~~~~~P~~i~f~~~~~~~~~~~~~~~~~~~C~~----~~~~CsC~dC~~~~~C~~~~ 268 (1294)
+ ||++||+|||+++ ||+|||||||++++...+||+|||..+++||+ +.++|||+||++ +||.+|
T Consensus 162 ~~C~~~~wl~flG~~~---ng~sPfqInf~~~~~~~~g~~p~n~~~~~C~e~~~~~~~~CSC~DC~~--sCp~~p 231 (232)
T 3gkj_A 162 DACQATNWIEYMFNKD---NGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSCQDCSI--VCGPKP 231 (232)
T ss_dssp TTCCHHHHHHHHTCGG---GSSSSSEEEEEECSSCBTTBCCBCCCCCCTTSCSBTTBCCCCGGGCGG--GC----
T ss_pred CCCCHHHHHHHHCCCC---CCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCHH--HCCCCC
T ss_conf 8889999999726566---897985777541688876565898888677888789999877765432--358997
No 3
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=1.00 E-value=1 Score=332.06 Aligned_cols=607 Identities=12% Similarity=0.087 Sum_probs=360.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69986999815101999998520000589999999999999977079888742211222024568999999999999998
Q 000767 605 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGF 684 (1294)
Q Consensus 605 ~~~~~~i~~~~e~si~~ei~~~s~~d~~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~Gl 684 (1294)
-++++++.+.++.+ +.+.+....-...+.++++++++++++.+++++ .++..++++++++++++|+
T Consensus 317 lp~g~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~lv~lvl~~~~~s~~------------~~li~~~~ip~s~~~~~~~ 382 (1052)
T 2v50_A 317 MPQGMKVVYPYDTT--PVVSASIHEVVKTLGEAILLVFLVMYLFLQNFR------------ATLIPTIAVPVVLLGTFGV 382 (1052)
T ss_dssp SCTTEEEEEEEESH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------------HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHH
T ss_conf 89981999971526--999999999999999999999999999985179------------9999999999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 86506421015577887775430227668446899973--2899999999999942013988999999999986205782
Q 000767 685 FSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ--QLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPM 762 (1294)
Q Consensus 685 ~~~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~--~~~~~~~~~i~~~l~~~g~si~ltslt~~~~F~~~~~s~~ 762 (1294)
+.++|++++. ++.+...+++|++|||.+|+++++++. ..+.+..+++.++.++.++|+++|++|++++|+.+++++.
T Consensus 383 l~~~g~~ln~-~s~~gl~~~iGi~vd~aI~~~~~~~~~~~~~g~~~~~A~~~a~~~~~~pil~t~ltt~~~f~pl~~~~~ 461 (1052)
T 2v50_A 383 LAAFGFSINT-LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPREAARKSMGQIQGALVGIAMVLSAVFLPMAFFGG 461 (1052)
T ss_dssp HHHHTCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHTTSSTTHHHHHHHHHTTHHHHTCCH
T ss_pred HHHHCCCHHH-HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9996787789-999999999775505659984599999986599989999999999999999999999999999998557
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH---HHHHHHH
Q ss_conf ---6899999999999999999999999999988542000258652332246888678778878887307---9999986
Q 000767 763 ---PACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGL---LARYMKE 836 (1294)
Q Consensus 763 ---p~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~~~~r~d~~~c~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ 836 (1294)
+.++.||+.+++|+++++++.+++.|+++++..++....+.. .+... .....+.. +.+++++
T Consensus 462 ~~g~~~~~~~~~~~~gl~~s~~~~l~l~P~l~~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~~y~~ 529 (1052)
T 2v50_A 462 STGVIYRQFSITIVSAMALSVIVALILTPALCATMLKPIEKGDHG------EHKGG------FFGWFNRMFLSTTHGYER 529 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------CCCCH------HHHHHHHHHHHHHHHHHH
T ss_conf 177899999999999999999999999999999864567664321------12101------456777899999999999
Q ss_pred HHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC---------CCCCCCCHHHH---HHHHHHHHCCCCCC--E
Q ss_conf 7021012454234447899999999966530458888544---------34789862535---89999853048998--9
Q 000767 837 VHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK---------IVLPRDSYLQG---YFNNISEHLRIGPP--L 902 (1294)
Q Consensus 837 ~ya~~l~~~~~r~~Viiif~~~~~~si~~~~~i~~gld~~---------~~lP~dS~~~~---y~~~i~~~l~~g~p--v 902 (1294)
. ..+.+++ |..+++++++++++++++..+++.++.+. ..+|+++.+.+ ..+.+++++..-|. +
T Consensus 530 ~-l~~~l~~--~~~~l~~~~~l~~~~~~~~~~l~~~f~P~~d~~~~~v~~~~p~g~s~~~t~~~~~~ie~~l~~~p~~~V 606 (1052)
T 2v50_A 530 G-VASILKH--RAPYLLIYVVIVAGMIWMFTRIPTAFLPDEDQGVLFAQVQTPPGSSAERTQVVVDSMREYLLEKESSSV 606 (1052)
T ss_dssp H-HHHHHHH--CSSHHHHHHHHHHHHHHHHHTSCBCSSCCCCTTEEEEEEECSTTCCHHHHHHHHHHHHHHHHHHTTTTE
T ss_pred H-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 9-9999855--799999999999999999997797228888887799999839999999999999999999984887607
Q ss_pred EEEEE--CCCCCCHHHHHHCCCC-CCC-C-------CCCHHHHHHHHHC-CCCCCCCC--C-------------------
Q ss_conf 99996--4789913231000002-333-6-------9301799998710-37888644--6-------------------
Q 000767 903 YFVVK--NYNYSSESRQTNQLCS-ISQ-C-------DSNSLLNEISRAS-LIPQSSYI--A------------------- 949 (1294)
Q Consensus 903 ~~Vv~--~~d~~~~~~~q~~ic~-~~~-c-------~~~sl~~~l~~~~-~~~~~s~i--~------------------- 949 (1294)
.-|.. +........+...+.. ... - +..++.+++.+.. +.|+.... .
T Consensus 607 ~~v~s~~G~~~~~~~~~~~~i~v~l~~~~~r~~~~~~~~~i~~~l~~~l~~~p~~~~~~~~~~~~~~~g~~~~~~i~i~~ 686 (1052)
T 2v50_A 607 SSVFTVTGFNFAGRGQSSGMAFIMLKPWEERPGGENSVFELAKRAQMHFFSFKDAMVFAFAPPSVLELGNATGFDLFLQD 686 (1052)
T ss_dssp EEEEEEESCCSSCCSTTEEEEEEEECCTTSCCSSTTSHHHHHHHHHHHSSSCSSSEEEEECCCSCC-----CCCCEEEEE
T ss_pred EEEEEEECCCCCCCCCCEEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEE
T ss_conf 99999826777889975279999972678656645789999999999862079847998337654577888865899997
Q ss_pred --CCC----CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHH
Q ss_conf --885----443999997515466564345689887899999999999998889988656887544-4687778999965
Q 000767 950 --KPA----ASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCF-HHSDLLKDRPSTI 1022 (1294)
Q Consensus 950 --~~~----~swlddf~~~l~~~~~~ccr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~-~~~~~~~~~P~~~ 1022 (1294)
.+. ..+.++..+.++... ..-... ..+.. ..+ +-..-. +...-..|. +.+
T Consensus 687 ~~g~d~~~L~~~a~~l~~~l~~~~-gv~~v~--~~~~~--~~p-----------------~~~i~id~~~a~~~Gl-s~~ 743 (1052)
T 2v50_A 687 QAGVGHEVLLQARNKFLMLAAQNP-ALQRVR--PNGMS--DEP-----------------QYKLEIDDEKASALGV-SLA 743 (1052)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTSCT-TEEEEE--ESSCC--CEE-----------------CCBCEECHHHHTTTTC-CHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCC-CEEECC--CCCCC--CCE-----------------EEEEEECHHHHHHCCC-CHH
T ss_conf 899999999999999999996099-927424--66667--970-----------------5999988999988699-999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCC-------------------------------CCCCCCEE---------CCCCCCCEE
Q ss_conf 89864999871089852137988-------------------------------86544200---------148878717
Q 000767 1023 QFKEKLPWFLNALPSASCAKGGH-------------------------------GAYTNSVD---------LKGYENGIV 1062 (1294)
Q Consensus 1023 ~f~~~l~~fl~~~p~~~c~~gg~-------------------------------~~y~~~v~---------~~~~~~~~I 1062 (1294)
+..+.+...+...+-.....++. .+.+.-.+ +..++..+
T Consensus 744 ~i~~~l~~~~~g~~~~~~~~~~~~~~v~v~~~~~~r~~~~~l~~l~v~~~~G~~VpL~~va~i~~~~~p~~i~r~n~~~- 822 (1052)
T 2v50_A 744 DINSTVSIAWGSSYVNDFIDRGRVKRVYLQGRPDARMNPDDLSKWYVRNDKGEMVPFNAFATGKWEYGSPKLERYNGVP- 822 (1052)
T ss_dssp HHHHHHHHHHSCEEEEEEEETTEEEEEEEEECGGGSSSGGGGTTCEEECSSSCEEEGGGGEECCCCEECSEECBCSSSB-
T ss_pred HHHHHHHHHHCCCEEEEEEECCEEEEEEEEECHHHCCCHHHHHCCEEECCCCCEEEHHHCEEEEEECCCCEEEECCCEE-
T ss_conf 9999999995892214999789199999996846646999880572488999899953717999945886189608806-
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 97699974146772548999999999999971102696252400020238999999999999999999999999999731
Q 000767 1063 QASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTC 1142 (1294)
Q Consensus 1063 ~~s~f~~~~~~l~~~~d~i~al~~~r~ia~~i~~~~~~~v~~ys~~~v~~eqy~~i~~~~~~~l~lal~~Ifiv~~ll~~ 1142 (1294)
.........+-.+..+..+.++ +..+++ +.|+.+...|.. ++.....++....+++++++|++++++.|+
T Consensus 823 -~i~V~~~~~~~~~~~~~~~~i~---~~~~~l--p~g~~~~~~G~~----~~~~~~~~~~~~~~~~a~~~i~l~l~~~f~ 892 (1052)
T 2v50_A 823 -AMEILGEPAPGLSSGDAMAAVE---EIVKQL--PKGVGYSWTGLS----YEERLSGSQAPALYALSLLVVFLCLAALYE 892 (1052)
T ss_dssp -EEEEEEEECTTCCSCTTTTTHH---HHGGGS--CTTEEEEECTHH----HHTTTTCCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred -EEEEEEEECCCCCHHHHHHHHH---HHHHHC--CCCCEEEECCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -8999998479988899999999---998638--998389955648----999999987999999999999999999980
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCEEEEEHHHHCCC---CCHHHHHHHHHHHHHHH
Q ss_conf 346999999999999999999999842535068899999644125011032112445148---99899999999985589
Q 000767 1143 SFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSS---GDKNQRMKEALGTMGAS 1219 (1294)
Q Consensus 1143 s~~~~lii~l~i~~~iv~~~G~M~l~gI~Ln~vSlv~lvi~iGIsVdf~iHi~~~f~~~~---~~~~er~~~Al~~~G~s 1219 (1294)
|++.++++++++++.+++.++.|+++|+++|..+++.+++.+|++|||++|+++++.+.. .+..+++.+|..++++|
T Consensus 893 s~~~~l~il~~ip~~~~g~~~~~~~~g~~l~~~~~~g~~~l~Gi~vd~~I~lv~~~~~~~~~g~~~~~Ai~~a~~~~~rp 972 (1052)
T 2v50_A 893 SWSIPFSVMLVVPLGVIGALLATSMRGLSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEACRMRLRP 972 (1052)
T ss_dssp CSSTTHHHHTHHHHHHTTHHHHHHHTTCCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 46889999999889999999999997797028999999999999772759995438899876999899999998870777
Q ss_pred HHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999988998998886401474---0379989999999999999999999999986308997
Q 000767 1220 VFSGITLTKLVGVIVLCFSRT---EVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPS 1277 (1294)
Q Consensus 1220 Vl~g~tlT~~~Gi~vLafs~~---~if~~f~frm~~~~vi~g~l~~LilLPvlLs~~gp~~ 1277 (1294)
|++++ +|+++|+++|+|+.+ +..+.+...+ .+.++++++.+|+++|+++.++++..
T Consensus 973 il~t~-~tt~~g~~pl~~~~~~g~~~~~~~~~~~-~~Gl~~s~~~~l~~~P~l~~~~~~~~ 1031 (1052)
T 2v50_A 973 IVMTS-LAFILGVVPLAISTGAGSGSQHAIGTGV-IGGMVTATVLAIFWVPLFYVAVSTLF 1031 (1052)
T ss_dssp HHHHH-HHHHTTSHHHHTCCSTTTTHHHHHHHHH-HHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHH-HHHHHHHHHHHHCCCCCHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999-9999999999853798726542459999-99999999999999999999998610
No 4
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=1.00 E-value=1 Score=328.05 Aligned_cols=604 Identities=13% Similarity=0.096 Sum_probs=362.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99869998151019999985200005899999999999999770798887422112220245689999999999999988
Q 000767 606 SKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFF 685 (1294)
Q Consensus 606 ~~~~~i~~~~e~si~~ei~~~s~~d~~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~Gl~ 685 (1294)
++++++.+.++.+ +.+++....-...+.++.+++++++++.|++++ .++..++.++++++++++++
T Consensus 318 p~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~lv~~vl~~~~~s~~------------~~li~~~~ip~~~~~~~~~l 383 (1057)
T 4dx5_A 318 PSGLKIVYPYDTT--PFVKISIHEVVKTLVEAIILVFLVMYLFLQNFR------------ATLIPTIAVPVVLLGTFAVL 383 (1057)
T ss_dssp CTTEEEEEEEESH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------------HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHH
T ss_conf 9981999970655--999999999999999999999999999986069------------99999999999999999999
Q ss_pred HHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--
Q ss_conf 6506421015577887775430227668446899973-28-9999999999994201398899999999998620578--
Q 000767 686 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ-QL-ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIP-- 761 (1294)
Q Consensus 686 ~~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~-~~-~~~~~~~i~~~l~~~g~si~ltslt~~~~F~~~~~s~-- 761 (1294)
.++|.+++. ++.+...+++|++|||.+++++++++. .+ +.+..+++.++.++.++|+++|++|++++|+.+++++
T Consensus 384 ~~~g~~ln~-~sl~gl~~~iGi~vd~aIv~~~~~~~~~~~~g~~~~~A~~~a~~~~~~pi~~t~ltt~~~f~pl~~~~g~ 462 (1057)
T 4dx5_A 384 AAFGFSINT-LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGS 462 (1057)
T ss_dssp HHTTCCBCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGCCHH
T ss_pred HHHCCCHHH-HHHHHHHHHEECCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 995776899-9999999974000356488589999999865999899999999999999999999999999999971672
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH---HHHHHH
Q ss_conf -2689999999999999999999999999998854200025865233224688867877887888730799---999867
Q 000767 762 -MPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLA---RYMKEV 837 (1294)
Q Consensus 762 -~p~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~~~~r~d~~~c~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~ 837 (1294)
.+.++.||+.+++|++++++..+|+.|+++.+..++....... +.. .+...+.. ..+.+.
T Consensus 463 ~~~~~~~~a~~~~~gl~~s~~~~l~~~P~l~~~~~~~~~~~~~~--------~~~--------~~~~~~~~~~~~~~~~~ 526 (1057)
T 4dx5_A 463 TGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHG--------EGK--------KGFFGWFNRMFEKSTHH 526 (1057)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCTTCCS--------TTC--------CSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------CCC--------HHHHHHHHHHHHHHHHH
T ss_conf 88999999999999999999999999999999864566654443--------321--------05778787899999999
Q ss_pred HHCC---CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC---------CCCCCCCHHHH---HHHHHHHHCC--CCC
Q ss_conf 0210---12454234447899999999966530458888544---------34789862535---8999985304--899
Q 000767 838 HATI---LSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK---------IVLPRDSYLQG---YFNNISEHLR--IGP 900 (1294)
Q Consensus 838 ya~~---l~~~~~r~~Viiif~~~~~~si~~~~~i~~gld~~---------~~lP~dS~~~~---y~~~i~~~l~--~g~ 900 (1294)
|.++ .+++ |..+++++++++++++++..+++.++-+. ..+|.++.+.+ ..+.+++.+. .-|
T Consensus 527 y~~~l~~~lr~--~~~~~~~~~~~l~~~~~~~~~l~~~f~P~~d~~~i~v~v~~p~gtsle~t~~~~~~ie~~l~~~~~p 604 (1057)
T 4dx5_A 527 YTDSVGGILRS--TGRYLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKN 604 (1057)
T ss_dssp HHHHHHHHHHS--CTHHHHHHHHHHHHHHHHHHHSCBCSSCCCCCSEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999843--7999999999999999999967961588888887999998699999999999999999998645898
Q ss_pred CEEEEEE--CCCCCCHHHHHHCCCC-CCC--------CCCCHHHHHHHHHC-CCCCCCCC--------------------
Q ss_conf 8999996--4789913231000002-333--------69301799998710-37888644--------------------
Q 000767 901 PLYFVVK--NYNYSSESRQTNQLCS-ISQ--------CDSNSLLNEISRAS-LIPQSSYI-------------------- 948 (1294)
Q Consensus 901 pv~~Vv~--~~d~~~~~~~q~~ic~-~~~--------c~~~sl~~~l~~~~-~~~~~s~i-------------------- 948 (1294)
.+.-|.. +.+......+...+-. ... -+..++.+++.+.. +.|+....
T Consensus 605 ~V~~v~s~~G~~~~~~~~n~~~i~V~L~~~~~r~~~~~s~~~i~~~lr~~l~~~p~~~~~~~~~~~~~~~g~~~~~~i~l 684 (1057)
T 4dx5_A 605 NVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFEL 684 (1057)
T ss_dssp TEEEEEEEESCSTTCCCTTEEEEEEEECCGGGSCSGGGSHHHHHHHHHHHHTTSTTCEEEEECCCSCGGGCCSSEEEEEE
T ss_pred CEEEEEEEECCCCCCCCCCEEEEEEEEECHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 71799999645678899744899999716887677679999999999998720898089973377656778888856999
Q ss_pred ---CCCC----CCHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf ---6885----4439999975154665643-45689887899999999999998889988656887544-4687778999
Q 000767 949 ---AKPA----ASWLDDFLVWISPEAFGCC-RKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCF-HHSDLLKDRP 1019 (1294)
Q Consensus 949 ---~~~~----~swlddf~~~l~~~~~~cc-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~-~~~~~~~~~P 1019 (1294)
..+. ..+.++..+.+....+ -- . -...+. ...+ +-..-. +......+.
T Consensus 685 ~~~~g~d~~~L~~~a~~l~~~l~~~~g-v~~~--v~~~~~--~~~~-----------------~l~i~id~~~a~~~Gl- 741 (1057)
T 4dx5_A 685 IDQAGLGHEKLTQARNQLLAEAAKHPD-MLTS--VRPNGL--EDTP-----------------QFKIDIDQEKAQALGV- 741 (1057)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHTTCTT-TEEE--EEESSC--CCEE-----------------EEEEEECHHHHHHHTC-
T ss_pred EECCCCCHHHHHHHHHHHHHHHHCCCC-CEEC--CCCCCC--CCCC-----------------EEEEEECHHHHHHCCC-
T ss_conf 957898999999999999999970999-2541--654666--8971-----------------4999988999987699-
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEC----------------CCCCC-----------------CEE----
Q ss_conf 96589864999871089852137988865442001----------------48878-----------------717----
Q 000767 1020 STIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDL----------------KGYEN-----------------GIV---- 1062 (1294)
Q Consensus 1020 ~~~~f~~~l~~fl~~~p~~~c~~gg~~~y~~~v~~----------------~~~~~-----------------~~I---- 1062 (1294)
+.++..+.+...+...+-.....++. .|...+.. ...++ ..|
T Consensus 742 s~~~v~~~l~~~~~g~~~~~~~~~~~-~~~v~v~~~~~~r~~~~~l~~l~v~~~~G~~v~L~~va~~~~~~~~~~i~~~~ 820 (1057)
T 4dx5_A 742 SINDINTTLGAAWGGSYVNDFIDRGR-VKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYN 820 (1057)
T ss_dssp CHHHHHHHHHHHHHCEEEEEEEETTE-EEEEEEEECGGGSSSGGGGGGCEEECTTSCEEEGGGTEEEEEEEECSEEEEET
T ss_pred CHHHHHHHHHHHHCCCEEEEEEECCE-EEEEEEECCHHHCCCHHHHCCEEEECCCCCEEEHHHCEEEEEECCCCEEEEEC
T ss_conf 99999999999958925379966998-99999845943449999870229789999899954718999835886389737
Q ss_pred --EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --976999741467725489999999999999711026962524000202389999999999999999999999999997
Q 000767 1063 --QASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLIT 1140 (1294)
Q Consensus 1063 --~~s~f~~~~~~l~~~~d~i~al~~~r~ia~~i~~~~~~~v~~ys~~~v~~eqy~~i~~~~~~~l~lal~~Ifiv~~ll 1140 (1294)
..........+-.+..+..+.++ ++.+.+ +.|+++...|. +++......+....+.+++++|++++++.
T Consensus 821 ~~~~v~v~~~~~~~~~~~~~~~~~~---~~~~~l--p~g~~~~~~G~----~~~~~~~~~~~~~~~~~a~~~i~l~L~~~ 891 (1057)
T 4dx5_A 821 GLPSMEILGQAAPGKSTGEAMELME---QLASKL--PTGVGYDWTGM----SYQERLSGNQAPSLYAISLIVVFLCLAAL 891 (1057)
T ss_dssp TEEEEEEEEEECTTCCHHHHHHHHH---HHHHTS--CTTEEEEECHH----HHSSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCHHHHHHHHH---HHHHHC--CCCCEEEECCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9189999997489999899999999---877429--89877985572----89999999889999999999999999999
Q ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCEEEEEHHHHCC----CCCHHHHHHHHHHHH
Q ss_conf 3134699999999999999999999984253506889999964412501103211244514----899899999999985
Q 000767 1141 TCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVS----SGDKNQRMKEALGTM 1216 (1294)
Q Consensus 1141 ~~s~~~~lii~l~i~~~iv~~~G~M~l~gI~Ln~vSlv~lvi~iGIsVdf~iHi~~~f~~~----~~~~~er~~~Al~~~ 1216 (1294)
|+|++.++++++++++.+++.+|.|+++|+++|..+++.+++.+|++|||+||++.++.+. +.+..+++.+|...+
T Consensus 892 f~s~~~~l~~l~~i~~~~~~~~~~l~~~g~~l~~~~~~g~i~l~Gi~vd~~I~lv~~~~~~~~~~g~~~~~Ai~~a~~~~ 971 (1057)
T 4dx5_A 892 YESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMR 971 (1057)
T ss_dssp HTCSSTHHHHHTTHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 96289899999998899999999999977985199999999999998717089835976998875999999999999886
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 58999998899899888640147---40379989999999999999999999999986308997
Q 000767 1217 GASVFSGITLTKLVGVIVLCFSR---TEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPS 1277 (1294)
Q Consensus 1217 G~sVl~g~tlT~~~Gi~vLafs~---~~if~~f~frm~~~~vi~g~l~~LilLPvlLs~~gp~~ 1277 (1294)
++||++++ +|+++|+++|+|+. ++.++.+...+ .+.++++++.+|+++|+++.+++++.
T Consensus 972 ~rpil~t~-ltt~~g~~pl~~~~g~g~~~~~~~g~~~-~~Gl~~s~~~tl~~~P~l~~~~~~~~ 1033 (1057)
T 4dx5_A 972 LRPILMTS-LAFILGVMPLVISTGAGSGAQNAVGTGV-MGGMVTATVLAIFFVPVFFVVVRRRF 1033 (1057)
T ss_dssp HHHHHHHH-HHHHHHTHHHHTCCSTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HHHHHHHHHHHHHCCCCHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76899999-9999999999984589626651549999-99999999999999999999998742
No 5
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=1.00 E-value=1 Score=325.68 Aligned_cols=601 Identities=10% Similarity=0.064 Sum_probs=358.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99869998151019999985200005899999999999999770798887422112220245689999999999999988
Q 000767 606 SKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFF 685 (1294)
Q Consensus 606 ~~~~~i~~~~e~si~~ei~~~s~~d~~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~Gl~ 685 (1294)
++++++.+.++.+ +.+++....-...+.++.+++++++++.++++ ..++..++.++++++++++++
T Consensus 323 p~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~lv~~vl~~~~~s~------------~~~li~~~~ip~~~~~~~~~l 388 (1054)
T 3ne5_A 323 PEGVEIVTTYDRS--QLIDRAIDNLSGKLLEEFIVVAVVCALFLWHV------------RSALVAIISLPLGLCIAFIVM 388 (1054)
T ss_dssp CTTEEEEEEEETH--HHHHHHHHHHHHHHHHHHHHHHHHTTTSSCSH------------HHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCEEEEEEECCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH------------HHHHHHHHHHHHHHHHHHHHH
T ss_conf 9983999985465--99999999999999999999999999984555------------889999999999999999999
Q ss_pred HHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHC-C-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65064210155778877754302276684468999732-8-----------99999999999942013988999999999
Q 000767 686 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ-L-----------ELPLETRISNALVEVGPSITLASLSEVLA 753 (1294)
Q Consensus 686 ~~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~~-~-----------~~~~~~~i~~~l~~~g~si~ltslt~~~~ 753 (1294)
.++|.+++. ++.....+++|++|||.+++++++++.. . +.+..+++.++.++++++++++++|++++
T Consensus 389 ~~~g~~ln~-~sl~gl~l~iGi~vd~aIvvve~~~~~~~~~~~~~~~~~~~g~~~~~a~~~a~~~~~~~i~~s~ltt~~~ 467 (1054)
T 3ne5_A 389 HFQGLNANI-MSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLS 467 (1054)
T ss_dssp HHHTCCBCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHSCSSCCCTTHHHHHHHTTTTTHHHHHHHHHHHHHHT
T ss_pred HHHCCCHHH-HHHHHHHHHHHHEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 981877889-9999999985620317398731899998611344444444567889999999999999999999999999
Q ss_pred HHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 98620578---268999999999999999999999999999885420002586523322468886787788788873079
Q 000767 754 FAVGSFIP---MPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLL 830 (1294)
Q Consensus 754 F~~~~~s~---~p~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~~~~r~d~~~c~~~~~~~~~~~~~~~~~~~~~l 830 (1294)
|+.+++++ .+..+.||+..++|+++++++.+|+.|+++.+..++....+.+ .....++
T Consensus 468 f~pl~~~~g~~~~~~~~~~~~~~~gl~~s~~~~l~~~P~l~~~~~~~~~~~~~~-------------------~~~~~~~ 528 (1054)
T 3ne5_A 468 FIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGKIPPESS-------------------NPLNRFL 528 (1054)
T ss_dssp TGGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHC-------------------------------CHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------------------CHHHHHH
T ss_conf 998887065488999988999999999999999999999999971366653223-------------------3789999
Q ss_pred HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC---------CCCCCCCHHHH---HHHHHHHHCCC
Q ss_conf 9999867021012454234447899999999966530458888544---------34789862535---89999853048
Q 000767 831 ARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK---------IVLPRDSYLQG---YFNNISEHLRI 898 (1294)
Q Consensus 831 ~~~~~~~ya~~l~~~~~r~~Viiif~~~~~~si~~~~~i~~gld~~---------~~lP~dS~~~~---y~~~i~~~l~~ 898 (1294)
.+++++. ..+.++++ ..+++++++++++++++..+++.++-+. ..+|+++.+.+ ..+.+++.+..
T Consensus 529 ~~~y~~~-~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~f~P~~d~g~~~v~~~~p~Gtsle~t~~~~~~ie~~l~~ 605 (1054)
T 3ne5_A 529 IRVYHPL-LLKVLHWP--KTTLLVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMS 605 (1054)
T ss_dssp HHHHHHH-HHHHTSST--HHHHHHHHHHHHHTHHHHTTCCBCSSCCCCCSEEEECCBCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9999999-99998527--99999999999999999976794589887887599999439999999999999999999851
Q ss_pred CCCEEEEEE--CCC--CCCHH-HHHHCCC-CCC-------CCCCCHHHHHHHHHCCCCCCCCC-----------------
Q ss_conf 998999996--478--99132-3100000-233-------36930179999871037888644-----------------
Q 000767 899 GPPLYFVVK--NYN--YSSES-RQTNQLC-SIS-------QCDSNSLLNEISRASLIPQSSYI----------------- 948 (1294)
Q Consensus 899 g~pv~~Vv~--~~d--~~~~~-~~q~~ic-~~~-------~c~~~sl~~~l~~~~~~~~~s~i----------------- 948 (1294)
-|.+.-+.. +.. ..++. .....+. ... +-+..++.+++.+..+.|+....
T Consensus 606 ~p~V~~v~s~~G~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~l~~~lr~~~~~p~~~~~~~~~~~~~~~~~~~g~~ 685 (1054)
T 3ne5_A 606 VPEVARVFGKTGKAETATDSAPLEMVETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIK 685 (1054)
T ss_dssp STTEEEEEEEEECCSSTTCCCCTTCBCEEEEECCTTTSCSSCCHHHHHHHHHHHSCCTTCBCCEECHHHHHHHHHHTSCS
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 98918999971577777888886438999996345653556899999999999718998434203553111000367888
Q ss_pred -------CCCC----CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf -------6885----443999997515466564345689887899999999999998889988656887544-4687778
Q 000767 949 -------AKPA----ASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCF-HHSDLLK 1016 (1294)
Q Consensus 949 -------~~~~----~swlddf~~~l~~~~~~ccr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~-~~~~~~~ 1016 (1294)
..+. ....++..+.+....+ --.. ...+.. ..+ +-..-. +......
T Consensus 686 ~~i~i~l~G~d~~~L~~~a~~l~~~l~~~~g-v~~v--~~~~~~--~~~-----------------~l~i~id~~~a~~~ 743 (1054)
T 3ne5_A 686 SPIGIKVSGTVLADIDAMAEQIEEVARTVPG-VASA--LAERLE--GGR-----------------YINVEINREKAARY 743 (1054)
T ss_dssp SSEEEEEECSCHHHHHHHHHHHHHHHHHSTT-CSEE--EECCSS--CEE-----------------EEEEEECHHHHHTT
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCC-CEEE--ECCCCC--CCE-----------------EEEEEECHHHHHHC
T ss_conf 7679999688999999999999999856999-2673--446667--980-----------------59999899999884
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCC-------------------------------CCCCCCCCCEECC-CCCCCEE--
Q ss_conf 99996589864999871089852137-------------------------------9888654420014-8878717--
Q 000767 1017 DRPSTIQFKEKLPWFLNALPSASCAK-------------------------------GGHGAYTNSVDLK-GYENGIV-- 1062 (1294)
Q Consensus 1017 ~~P~~~~f~~~l~~fl~~~p~~~c~~-------------------------------gg~~~y~~~v~~~-~~~~~~I-- 1062 (1294)
|. +.++..+.+...+...+-..... |...+.+.-.+.. ......|
T Consensus 744 Gl-s~~~v~~~l~~~~~g~~~~~~~~~~~~~~v~vr~~~~~r~~~~~l~~l~v~~~~G~~v~L~~va~~~~~~~~~~i~~ 822 (1054)
T 3ne5_A 744 GM-TVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITLADVADIKVSTGPSMLKT 822 (1054)
T ss_dssp TC-CHHHHHHHHHTTTSCCEEEEEEETTEEEEEEEECCGGGSSSHHHHTTCEEECTTCCEEEGGGTEEEEEEEECSCEEE
T ss_pred CC-CHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEECHHHCCCHHHHHCCEEECCCCCEEEHHHCEEEEEECCCCEEEE
T ss_conf 98-99999999999838951058987998999999967354489898712276889998999548089998358761898
Q ss_pred ----EEEEEEEECCCCCCHHHHHHHHHHHHHHHH-HHHCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----976999741467725489999999999999-711026962524000202389999999999999999999999999
Q 000767 1063 ----QASSFRTYHTPLNRQIDYVNSMRAAREFSS-RVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVC 1137 (1294)
Q Consensus 1063 ----~~s~f~~~~~~l~~~~d~i~al~~~r~ia~-~i~~~~~~~v~~ys~~~v~~eqy~~i~~~~~~~l~lal~~Ifiv~ 1137 (1294)
......... . ..+..+..+++++..+ +...+.|+++...|. +++.....+.....+++++++|++++
T Consensus 823 ~~~~~~~~v~~~~-~---~~~~~~~~~~i~~~~~~~~~~p~g~~~~~~G~----~~~~~~~~~~~~~~~~~al~li~l~L 894 (1054)
T 3ne5_A 823 ENARPTSWIYIDA-R---DRDMVSVVHDLQKAIAEKVQLKPGTSVAFSGQ----FELLERANHKLKLMVPMTLMIIFVLL 894 (1054)
T ss_dssp ETTEEEEEEEEEC-C---SSCHHHHHHHHHHHHHHHCCCCTTCEEEEEEH----HHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ECCEEEEEEEEEE-C---CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7791799999981-8---99989999999999984289989838996745----89999999999999999999999999
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCEEEEEHHHHCC--------------CC
Q ss_conf 9973134699999999999999999999984253506889999964412501103211244514--------------89
Q 000767 1138 LITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVS--------------SG 1203 (1294)
Q Consensus 1138 ~ll~~s~~~~lii~l~i~~~iv~~~G~M~l~gI~Ln~vSlv~lvi~iGIsVdf~iHi~~~f~~~--------------~~ 1203 (1294)
++.|+|++.++++++++++.+++.+|.|+++|+++|..+++.+++.+|++|||++|++.++.+. +.
T Consensus 895 ~~~f~S~~~~l~il~~ip~~~~g~~~~l~l~g~~l~~~~~~g~i~l~Gi~vd~~I~lv~~~~~~~~~~~~~~~~~~~~g~ 974 (1054)
T 3ne5_A 895 YLAFRRVGEALLIISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQ 974 (1054)
T ss_dssp HHHTCCHHHHHHHHTTSHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHHHHTTTSCCHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99980799999999999899999999999987983099999999999999953236899999999864321002355899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9899999999985589999988998998886401474---037998999999999999999999999998630899
Q 000767 1204 DKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRT---EVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPP 1276 (1294)
Q Consensus 1204 ~~~er~~~Al~~~G~sVl~g~tlT~~~Gi~vLafs~~---~if~~f~frm~~~~vi~g~l~~LilLPvlLs~~gp~ 1276 (1294)
+..+++.+|...+++||++++ +|+++|+++|+|+.+ +.++.+...+ .+.++++++.+|+++|+++.+++.+
T Consensus 975 ~~~~Ai~~a~~~~~rpil~t~-ltti~g~~pl~~~~g~g~~~~~~l~~~~-~~Gl~~s~~~tl~v~P~l~~~~~~~ 1048 (1054)
T 3ne5_A 975 KLDEALYHGAVLRVRPKAMTV-AVIIAGLLPILWGTGAGSEVMSRIAAPM-IGGMITAPLLSLFIIPAAYKLMWLH 1048 (1054)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHSCCSTTHHHHHHTTHHH-HHHHHHHHHHHHHHTHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999887474899999-9999999999962589757755579999-9699999999999999999999973
No 6
>3aqp_A Probable secdf protein-export membrane protein; translocon, cell membrane, MEM protein transport, translocation, transmembrane, transport; 3.30A {Thermus thermophilus} PDB: 2rrn_A
Probab=1.00 E-value=1 Score=301.77 Aligned_cols=471 Identities=13% Similarity=0.152 Sum_probs=320.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9986999815101999998520-000589999999999999977079888742211222024568999999999999998
Q 000767 606 SKNLTLAFSSESSIEEELKRES-TADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGF 684 (1294)
Q Consensus 606 ~~~~~i~~~~e~si~~ei~~~s-~~d~~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~Gl 684 (1294)
+.++++.+.. ++..++.+.+ +.-....+++++++++++.+.++ + ..++.+++.+++++++++|+
T Consensus 251 P~~~~~~~~~--~vg~~l~~~~~~~~~~a~~i~~~lv~l~l~l~~r-~------------~~~li~~~~l~~~i~~~~~~ 315 (741)
T 3aqp_A 251 PVPLKVAEIR--AIGPTLGQDAIQAGIRSALIGTLAIFLLIFAYYG-P------------HLGLVASLGLLYTSALILGL 315 (741)
T ss_dssp CCCCEEEEEE--EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-H------------HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H------------HHHHHHHHHHHHHHHHHHHH
T ss_conf 8862688754--0687899999999999999999999999999981-3------------78999999999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 86506421015577887775430227668446899973-28999999999999420139889999999999862057826
Q 000767 685 FSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ-QLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 763 (1294)
Q Consensus 685 ~~~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~-~~~~~~~~~i~~~l~~~g~si~ltslt~~~~F~~~~~s~~p 763 (1294)
++++|.++|+ ++...+.+++|++|||.++++++++++ ..+.+.++++.+++++++++++.+++|++++|+.+.+.+.+
T Consensus 316 l~l~g~~l~l-~~i~glil~iGi~VD~~I~i~eri~e~~~~g~~~~~Ai~~~~~~~~~~Il~s~lTt~i~f~~L~~~~~~ 394 (741)
T 3aqp_A 316 LSGLGATLTL-PGIAGLVLTLGAAVDGNVLSFERIKEELRAGKKLRQAIPEGFRHSTLTIMDVNIAHLLAAAALYQYATG 394 (741)
T ss_dssp HHHHCCBCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHHCCCCCH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9998778159-999999999999983420458999999985999999999999999999999999999999999997056
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 89999999999999999999999999998854200025865233224688867877887888730799999867021012
Q 000767 764 ACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILS 843 (1294)
Q Consensus 764 ~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~~~~r~d~~~c~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ya~~l~ 843 (1294)
.+|.||+..++|++++++..+++.|+++.+..++...++. . . +.+...+++.
T Consensus 395 ~~~~fa~~~~~gi~~s~~~al~~~P~l~~~~~~~~~~~~~----~-------------------~-----~~~~~~~~l~ 446 (741)
T 3aqp_A 395 PVRGFAVILAIGVVASVFSNLVFSRHLLERLADRGEIRPP----M-------------------W-----LVDPRFNFMG 446 (741)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC----C-------------------C-----CCCCCCSTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----C-------------------C-----CCCCHHHHHH
T ss_conf 6326999999999999999999999999998416777886----4-------------------2-----1020206975
Q ss_pred CCCEEEEHHHHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 45423444789999999996653--0458888544347898625358999985304899899999647899132310000
Q 000767 844 LWGVKIAVISLFVAFTLASIALC--TRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQL 921 (1294)
Q Consensus 844 ~~~~r~~Viiif~~~~~~si~~~--~~i~~gld~~~~lP~dS~~~~y~~~i~~~l~~g~pv~~Vv~~~d~~~~~~~q~~i 921 (1294)
++ ..+++++++++++++++. +.++.+ . .+.+|.++.+.+++ +. +.
T Consensus 447 ~r---~~~~~i~~vl~~~~~~~~~~~~~~~~----------------~-----~f~Gg~~i~v~~~~-~~-~~------- 493 (741)
T 3aqp_A 447 PA---RYVTAATLLLAALAAGVVFAKGFNYS----------------I-----DFTGGTAYTLRAEP-NV-EV------- 493 (741)
T ss_dssp TH---HHHHHHHHHHHHHHHHHHHHHTCCCC----------------H-----HHHCEEEEEEEECT-TC-CH-------
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHCCCCCC----------------E-----ECCCCCEEEEEECC-CC-CH-------
T ss_conf 40---79999999999999999865247752----------------2-----62898579999789-99-99-------
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02333693017999987103788864468854439999975154665643456898878999999999999988899886
Q 000767 922 CSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGV 1001 (1294)
Q Consensus 922 c~~~~c~~~sl~~~l~~~~~~~~~s~i~~~~~swlddf~~~l~~~~~~ccr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1294)
+++.+.+++. . . +.+...
T Consensus 494 --------~~l~~~l~~~------------------------g--~-------------~~~~~~--------------- 511 (741)
T 3aqp_A 494 --------ETLRRFLEEK------------------------G--F-------------PGKEAV--------------- 511 (741)
T ss_dssp --------HHHHHHHHTT------------------------T--S-------------CSSSCE---------------
T ss_pred --------HHHHHHHHHC------------------------C--C-------------CCCCHH---------------
T ss_conf --------9999999865------------------------9--9-------------998423---------------
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCCCCCHHHHH
Q ss_conf 56887544468777899996589864999871089852137988865442001488787179769997414677254899
Q 000767 1002 CKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYV 1081 (1294)
Q Consensus 1002 ~~~c~~c~~~~~~~~~~P~~~~f~~~l~~fl~~~p~~~c~~gg~~~y~~~v~~~~~~~~~I~~s~f~~~~~~l~~~~d~i 1081 (1294)
.. .. +.+ .+ + +. ++...... .+.++..
T Consensus 512 -------v~--~~------g~~-------------~~----~---------------~~-----~~~v~~~~-~~~~~~~ 538 (741)
T 3aqp_A 512 -------IT--QV------QAP-------------TA----A---------------YR-----EFLVKLPP-LSDERRL 538 (741)
T ss_dssp -------EE--EC--------------------------------------------CE-----EEEEEESC-CCHHHHH
T ss_pred -------HH--HC------CCC-------------CC----C---------------CE-----EEEEEECC-CCHHHHH
T ss_conf -------41--10------678-------------76----7---------------55-----89998079-9999999
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999711026962524000202389999999999999999999999999997313469999999999999999
Q 000767 1082 NSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDL 1161 (1294)
Q Consensus 1082 ~al~~~r~ia~~i~~~~~~~v~~ys~~~v~~eqy~~i~~~~~~~l~lal~~Ifiv~~ll~~s~~~~lii~l~i~~~iv~~ 1161 (1294)
+..+..+ +.+.. .+.++...| -+....+.+.....+.++++++++++++.| |++.++++++++++.++.+
T Consensus 539 ~l~~~l~---~~~~~-~~~~~~~vG-----~~~~~~~~~~~~~al~lali~i~l~l~~~F-s~~~~l~~l~~l~~~~~~~ 608 (741)
T 3aqp_A 539 ELERLFA---SELKA-TVLASETVG-----PAIGEELRRNAVMAVLVGLGLILLYVAFRF-DWTFGVASILAVAHDVAIV 608 (741)
T ss_dssp HHHHHHH---HHSSS-CCCEEEEEC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHCCC-CCEEEEEEC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999---76587-760799735-----889999999899999999999999999999-8999899999999999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHEEECCEEEEEHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999842535068899999644125011032112445148-----9989999999998558999998899899888640
Q 000767 1162 MGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSS-----GDKNQRMKEALGTMGASVFSGITLTKLVGVIVLC 1236 (1294)
Q Consensus 1162 ~G~M~l~gI~Ln~vSlv~lvi~iGIsVdf~iHi~~~f~~~~-----~~~~er~~~Al~~~G~sVl~g~tlT~~~Gi~vLa 1236 (1294)
+|+|+++|+++|..+++.+++.+|++|||++|+.++++++. .+.++++.+|+.++|+|+++++ +|+++|+++|+
T Consensus 609 ~g~l~l~g~~l~~~~i~~~l~liGisvd~~I~l~~r~re~~~~~~g~~~~eav~~a~~~~~~~il~Ts-ltt~~g~~~L~ 687 (741)
T 3aqp_A 609 AGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTS-LTTLLPILALL 687 (741)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf 99999991671699999999999996466388449999999744799999999999999999999999-99999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14740379989999999999999999999999986308997541
Q 000767 1237 FSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPSRCM 1280 (1294)
Q Consensus 1237 fs~~~if~~f~frm~~~~vi~g~l~~LilLPvlLs~~gp~~~~~ 1280 (1294)
++..+.++.|.+.+. ..++++++++|+++|+++.+++++.++.
T Consensus 688 ~~g~~~~~~~g~~~~-~Gl~~~~~~sl~l~Pal~~~~~~~~~~~ 730 (741)
T 3aqp_A 688 FLGGSVLRDFALAIF-VGIFVGTYSSIYVVSALVVAWKNRRKAQ 730 (741)
T ss_dssp HHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 954587899999999-9999999999999999999960123456
No 7
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=1.00 E-value=1 Score=178.18 Aligned_cols=176 Identities=15% Similarity=0.098 Sum_probs=148.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99869998151019999985200005-89999999999999977079888742211222024568999999999999998
Q 000767 606 SKNLTLAFSSESSIEEELKRESTADA-ITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGF 684 (1294)
Q Consensus 606 ~~~~~i~~~~e~si~~ei~~~s~~d~-~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~Gl 684 (1294)
++++++.+.|+.. +..+. ..+. ..+.++++++++++.+.+++++ ..+..++.++++++++++.
T Consensus 851 p~g~~~~~~G~~~---~~~~~-~~~~~~~~~~a~~~i~l~l~~~f~s~~------------~~l~il~~ip~~~~g~~~~ 914 (1052)
T 2v50_A 851 PKGVGYSWTGLSY---EERLS-GSQAPALYALSLLVVFLCLAALYESWS------------IPFSVMLVVPLGVIGALLA 914 (1052)
T ss_dssp CTTEEEEECTHHH---HTTTT-CCCSHHHHHHHHHHHHHHHHHHTTCSS------------TTHHHHTHHHHHHTTHHHH
T ss_pred CCCCEEEECCHHH---HHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHH------------HHHHHHHHHHHHHHHHHHH
T ss_conf 9983899556489---99999-987999999999999999999980468------------8999999988999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-
Q ss_conf 86506421015577887775430227668446899973-2899999999999942013988999999999986205782-
Q 000767 685 FSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ-QLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPM- 762 (1294)
Q Consensus 685 ~~~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~-~~~~~~~~~i~~~l~~~g~si~ltslt~~~~F~~~~~s~~- 762 (1294)
+.++|.+++. .+.+...+++|++|||.+|+++++++. .++.+..+++.++..+.+.|+++|++|+++||+.++++..
T Consensus 915 ~~~~g~~l~~-~~~~g~~~l~Gi~vd~~I~lv~~~~~~~~~g~~~~~Ai~~a~~~~~rpil~t~~tt~~g~~pl~~~~~~ 993 (1052)
T 2v50_A 915 TSMRGLSNDV-FFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEACRMRLRPIVMTSLAFILGVVPLAISTGA 993 (1052)
T ss_dssp HHHTTCCBSH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHTCCST
T ss_pred HHHHCCCCCH-HHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9997797028-999999999999772759995438899876999899999998870777999999999999999853798
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf --689999999999999999999999999998854200
Q 000767 763 --PACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRA 798 (1294)
Q Consensus 763 --p~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~ 798 (1294)
+..+.||+..++|++++.++.+++.|+++.+..++.
T Consensus 994 g~~~~~~~~~~~~~Gl~~s~~~~l~~~P~l~~~~~~~~ 1031 (1052)
T 2v50_A 994 GSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVSTLF 1031 (1052)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 72654245999999999999999999999999998610
No 8
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=1.00 E-value=1 Score=172.38 Aligned_cols=178 Identities=15% Similarity=0.095 Sum_probs=150.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 699869998151019999985200005-8999999999999997707988874221122202456899999999999999
Q 000767 605 QSKNLTLAFSSESSIEEELKRESTADA-ITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVG 683 (1294)
Q Consensus 605 ~~~~~~i~~~~e~si~~ei~~~s~~d~-~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~G 683 (1294)
.++++++.+.|+ .++..+ +..+. ..+.++++++++++.+.+++++ .++..++.++++++.+++
T Consensus 851 lp~g~~~~~~G~---~~~~~~-~~~~~~~~~~~a~~~i~l~L~~~f~s~~------------~~l~~l~~i~~~~~~~~~ 914 (1057)
T 4dx5_A 851 LPTGVGYDWTGM---SYQERL-SGNQAPSLYAISLIVVFLCLAALYESWS------------IPFSVMLVVPLGVIGALL 914 (1057)
T ss_dssp SCTTEEEEECHH---HHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHTCSS------------THHHHHTTHHHHHHHHHH
T ss_pred CCCCCEEEECCH---HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHH
T ss_conf 989877985572---899999-9988999999999999999999996289------------899999998899999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 886506421015577887775430227668446899973--289999999999994201398899999999998620578
Q 000767 684 FFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ--QLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIP 761 (1294)
Q Consensus 684 l~~~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~--~~~~~~~~~i~~~l~~~g~si~ltslt~~~~F~~~~~s~ 761 (1294)
.+.++|.+++. .+.+...+++|+++||.+++++++++. .++.+..+++.++..+.+.|+++|++|+++||+.++++.
T Consensus 915 ~l~~~g~~l~~-~~~~g~i~l~Gi~vd~~I~lv~~~~~~~~~~g~~~~~Ai~~a~~~~~rpil~t~ltt~~g~~pl~~~~ 993 (1057)
T 4dx5_A 915 AATFRGLTNDV-YFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVIST 993 (1057)
T ss_dssp HHHHHTCCBCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTCC
T ss_pred HHHHHCCCCCH-HHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99997798519-99999999999987170898359769988759999999999998867689999999999999999845
Q ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf ---26899999999999999999999999999988542000
Q 000767 762 ---MPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAE 799 (1294)
Q Consensus 762 ---~p~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~~ 799 (1294)
.+..+.||+.+++|+++++++.+++.|+++.+..++..
T Consensus 994 g~g~~~~~~~g~~~~~Gl~~s~~~tl~~~P~l~~~~~~~~~ 1034 (1057)
T 4dx5_A 994 GAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRRRFS 1034 (1057)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89626651549999999999999999999999999987421
No 9
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=1.00 E-value=1 Score=166.19 Aligned_cols=178 Identities=10% Similarity=0.072 Sum_probs=147.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69986999815101999998520000589999999999999977079888742211222024568999999999999998
Q 000767 605 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGF 684 (1294)
Q Consensus 605 ~~~~~~i~~~~e~si~~ei~~~s~~d~~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~Gl 684 (1294)
.++++++.+.|+.....+.. ..-...+.++.+++++++.+.++++ ..++..++++++++++++|.
T Consensus 857 ~p~g~~~~~~G~~~~~~~~~---~~~~~~~~~al~li~l~L~~~f~S~------------~~~l~il~~ip~~~~g~~~~ 921 (1054)
T 3ne5_A 857 LKPGTSVAFSGQFELLERAN---HKLKLMVPMTLMIIFVLLYLAFRRV------------GEALLIISSVPFALVGGIWL 921 (1054)
T ss_dssp CCTTCEEEEEEHHHHHHHHH---HHHHTHHHHHHHHHHHHHHHHTCCH------------HHHHHHHTTSHHHHHHHHHH
T ss_pred CCCCCEEEECCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCH------------HHHHHHHHHHHHHHHHHHHH
T ss_conf 98983899674589999999---9999999999999999999998079------------99999999998999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCC------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8650642101557788777543022766844689997328------------9999999999994201398899999999
Q 000767 685 FSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL------------ELPLETRISNALVEVGPSITLASLSEVL 752 (1294)
Q Consensus 685 ~~~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~~~------------~~~~~~~i~~~l~~~g~si~ltslt~~~ 752 (1294)
+.++|.+++. .+.+...+++|+++||.+++++++++..+ +.+..+++.++..+.+.|+++|++|+++
T Consensus 922 l~l~g~~l~~-~~~~g~i~l~Gi~vd~~I~lv~~~~~~~~~~~~~~~~~~~~g~~~~~Ai~~a~~~~~rpil~t~ltti~ 1000 (1054)
T 3ne5_A 922 LWWMGFHLSV-ATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIA 1000 (1054)
T ss_dssp HHHHTCCBCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHHHHTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998798309-999999999999995323689999999986432100235589989999999988747489999999999
Q ss_pred HHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99862057---82689999999999999999999999999998854200
Q 000767 753 AFAVGSFI---PMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRA 798 (1294)
Q Consensus 753 ~F~~~~~s---~~p~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~ 798 (1294)
||+.++++ ..+..+.||+.+++|+++++++.+++.|+++.+..++.
T Consensus 1001 g~~pl~~~~g~g~~~~~~l~~~~~~Gl~~s~~~tl~v~P~l~~~~~~~~ 1049 (1054)
T 3ne5_A 1001 GLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFIIPAAYKLMWLHR 1049 (1054)
T ss_dssp HHHHHHSCCSTTHHHHHHTTHHHHHHHHHHHHHHHHHTHHHHHHHTTTC
T ss_pred HHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999996258975775557999996999999999999999999999734
No 10
>3aqp_A Probable secdf protein-export membrane protein; translocon, cell membrane, MEM protein transport, translocation, transmembrane, transport; 3.30A {Thermus thermophilus} PDB: 2rrn_A
Probab=1.00 E-value=1 Score=159.82 Aligned_cols=174 Identities=16% Similarity=0.282 Sum_probs=143.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98699981510199999852000058999999999999997707988874221122202456899999999999999886
Q 000767 607 KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFS 686 (1294)
Q Consensus 607 ~~~~i~~~~e~si~~ei~~~s~~d~~~l~is~llm~i~i~~~l~~~~~~~~~~v~Sk~~l~l~~i~~v~~sv~~s~Gl~~ 686 (1294)
...++.+.|+ ...+++.+ .-...+.++.+++++|+.+.+ + +..++..++.+++++++++|+++
T Consensus 551 ~~~~~~~vG~-~~~~~~~~---~~~~al~lali~i~l~l~~~F-s------------~~~~l~~l~~l~~~~~~~~g~l~ 613 (741)
T 3aqp_A 551 TVLASETVGP-AIGEELRR---NAVMAVLVGLGLILLYVAFRF-D------------WTFGVASILAVAHDVAIVAGMYS 613 (741)
T ss_dssp CCCEEEEECH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHHS-C------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHHH-H------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7607997358-89999999---899999999999999999999-8------------99989999999999999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 5064210155778877754302276684468999732---8999999999999420139889999999999862057826
Q 000767 687 AIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ---LELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 763 (1294)
Q Consensus 687 ~~Gi~~~~i~~~viPfLilaiGvD~~~~l~~~~~~~~---~~~~~~~~i~~~l~~~g~si~ltslt~~~~F~~~~~s~~p 763 (1294)
++|++++. .+.+...+++|+++||.+|+++++++.. ++.+.++++.+++.+.+.++++|++|++++|+.+++++.+
T Consensus 614 l~g~~l~~-~~i~~~l~liGisvd~~I~l~~r~re~~~~~~g~~~~eav~~a~~~~~~~il~Tsltt~~g~~~L~~~g~~ 692 (741)
T 3aqp_A 614 LLGLEFSI-PTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGS 692 (741)
T ss_dssp HHTCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHCCCCH-HHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99167169-99999999999964663884499999997447999999999999999999999999999999999995458
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999999999999999999999998854200
Q 000767 764 ACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRA 798 (1294)
Q Consensus 764 ~vr~F~l~aa~avl~~~l~~lt~~palL~l~~~r~ 798 (1294)
.++.||+..++|++++.+..+++.|+++.+..+|.
T Consensus 693 ~~~~~g~~~~~Gl~~~~~~sl~l~Pal~~~~~~~~ 727 (741)
T 3aqp_A 693 VLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNRR 727 (741)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78999999999999999999999999999960123
Done!