Your job contains 1 sequence.
>000768
MENSEYTKAISGDKIDGPSFNNVHQVNTASLGNFSGNGNVSGNSNVDIQSLLDMEELLDK
ELEEAQEHRRICEIEERKALKAYRKAQRALIEANASCTKLYRQRELCSARFRSFVMDDSN
LLWSSGQHETLGNEFDLSKHVSGNMHLAPTSTHQMQSGYVGYNQGGYDSSMQCINGDLQN
FSHEHENGQNLGSEPCSEQDASTSELLPRKSKNALNGISPQSNELMVSADEEEEACQLDL
ESVQPNFEYQQKDQIAEGRQISTDYRHNNKLSAVSSQDPLLLEATLRSELFARLGMRTFS
KDSGSCFNVEPSVEQRADNDIGSDKMQMSNGSVPSSGEQSQQHDIGGTDKPERRIQEAPF
QIQDKCLVEKGLLEFHSTYHSKGNKFPTTMNHSTSVLLSPPILRGAFGHLKSELCIALSN
QSGNQHNHGRNFEIEEVACVNSDKTQACYLIANSKPDIVKGYVGKEMGSYTCNLAIDPLW
PLCMYELRGKCNNDECPWQHVKYFADRNKNLHDDSDSAGCQIGSTIPQEHCNVGTKLSKG
HDILTPPTYIVGLDILKADSYQYQSVIARRHGLCWQKCLSVSLAISSIYPKDLPADLSLI
GDGRIECIGSWNRQSSFFRSRNGVLNKLKQVELSNEQCVEMALLILNQDANKLEGMKKAL
SLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTP
LNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRL
LIPATGSNDRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEKELFAI
DWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNG
LECSMNLLEKYIKLYPSCLELVLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQCIWN
QYVEYALQNGRHDFAAELMDRWFHSVWKVQYSQVEISDPLVADMSHSSPESTSTSDPEFS
VSNRNQMDVMFGYLNLSLHRLLQNDWNEARLAIDAALKAAASEHFKHCVREHAMLLLINE
SEPKEGAPISWQLKLLNSYLDRARSLPYLKLLPRQFINNIERPRLQQLIDNLLSPVSSDF
SLVNLVLEVCYGPSLLPRNFSKLKDLVDFVEGIMEIVPSNYQLAFSVFKLLNKDHNPNIT
DAVPESVLFWASSSLVSAIFHAVPVAPEYVWVEAAGILGNISSIEEISERFFKRALSVYP
FSIKLWKCYYDLSKTKGDLNTIVKAAREKGIELD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000768
(1294 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039797 - symbol:AT2G39580 "AT2G39580" species... 1527 4.4e-218 3
UNIPROTKB|E1C1R6 - symbol:ZFC3H1 "Uncharacterized protein... 160 1.1e-10 4
UNIPROTKB|O60293 - symbol:ZFC3H1 "Zinc finger C3H1 domain... 131 2.0e-07 6
UNIPROTKB|E1BIV7 - symbol:LOC781886 "Uncharacterized prot... 122 4.9e-07 5
UNIPROTKB|E2QSB0 - symbol:ZFC3H1 "Uncharacterized protein... 123 2.8e-06 5
UNIPROTKB|F6UU41 - symbol:ZFC3H1 "Uncharacterized protein... 123 2.9e-06 5
UNIPROTKB|E9PTM2 - symbol:E9PTM2 "Uncharacterized protein... 107 2.4e-05 4
UNIPROTKB|F1MAP0 - symbol:F1MAP0 "Uncharacterized protein... 107 2.4e-05 4
>TAIR|locus:2039797 [details] [associations]
symbol:AT2G39580 "AT2G39580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 InterPro:IPR019607 Pfam:PF10650
IPI:IPI00544933 RefSeq:NP_181490.5 UniGene:At.43594 PRIDE:F4IVX7
EnsemblPlants:AT2G39580.1 GeneID:818543 KEGG:ath:AT2G39580
OMA:LMYINSR Uniprot:F4IVX7
Length = 1577
Score = 1527 (542.6 bits), Expect = 4.4e-218, Sum P(3) = 4.4e-218
Identities = 322/642 (50%), Positives = 421/642 (65%)
Query: 658 KALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINS 717
+ALSLLS+ LE DPTSEILW YLLI+++ S GKD MFSY VKH+ SY +WLMYINS
Sbjct: 950 QALSLLSQGLEGDPTSEILWAVYLLIYHAYEGSDGKD-MFSYGVKHSSRSYVIWLMYINS 1008
Query: 718 RTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRI 777
R LN +L AYD ALS LC AS S D HASACILD+ LQM C+SGN KAIQRI
Sbjct: 1009 RGQLNDQLIAYDTALSALCNHASGSI-DRNHASACILDVLLQMFNLLCISGNVSKAIQRI 1067
Query: 778 SRLLIPATGSNDRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEKEL 837
S+L PA S+D +S ILTCLT SDK +FWVCCVYLVIYRKLPD++++ LE EKEL
Sbjct: 1068 SKLQAPAAVSDDPDFSLMSHILTCLTYSDKCVFWVCCVYLVIYRKLPDSIIRRLEMEKEL 1127
Query: 838 FAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAV 897
I+WP V L+ D KQ A++L + + SVE + ++K R A FA+N+ M
Sbjct: 1128 LEIEWPTVNLDGDLKQMALRLFDKGMRSVE-HGTNNGIQK----RPAGLFALNYALFMIA 1182
Query: 898 LNGLECSMNLLEKYIKLYPSCLELVLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQC 957
++ LE ++L+ ++LYP+CLEL L+ R+Q ++ D+ S GFEE L + K IQC
Sbjct: 1183 VDELESRRDILKASVQLYPTCLELKLLAVRMQSNELKDMFSSGFEELLKQEAKEASCIQC 1242
Query: 958 IWNQYVEYALQNGRHDFAAELMDRWFHSVWKV---QYSQVEISDPLVADMXXXXXXXXXX 1014
IWNQY EYAL+ G +D A ELM RW+ SVW V +Y V ++ D
Sbjct: 1243 IWNQYAEYALEGGSYDLARELMSRWYGSVWDVLSHKYKTVRGNEEEGDD------NMLES 1296
Query: 1015 XXXXXXVSNRNQMDVMFGYLNLSLHRLLQNDWNEXXXXXXXXXXXXXSEHFKHCVREHAM 1074
V++ +Q+DVMFGYLNLSLH LLQ++W E EHF HC+REHA+
Sbjct: 1297 ALSDLNVAS-DQVDVMFGYLNLSLHNLLQSNWTEARLAIDQALKATAPEHFMHCLREHAV 1355
Query: 1075 LLLINESEPKEGAPISWQLKLLNSYLDRARSLPYLKLLPRQFINN-IERPRLQQLIDNLL 1133
LINE + I+ Q++LLNSYLDRA SLP + L +FI+N E+PR+++L+ NLL
Sbjct: 1356 FQLINELQATGEFSINLQMRLLNSYLDRASSLPVKEPLSWKFISNSAEKPRVRKLVTNLL 1415
Query: 1134 SPVSSDFSLVNLVLEVCYGPSLLPRNFSKLKDLVDFVEGIMEIVPSNYQLAFSVFKLLNK 1193
+PVSS+ +VN+VLE +GPSL+P SK K+LVDFVE I+ +VPSNY LA SV KLL K
Sbjct: 1416 APVSSELFVVNVVLEAWHGPSLVPEKLSKQKELVDFVETILGLVPSNYPLALSVSKLLRK 1475
Query: 1194 DHNPNITDAVPESVLFWASSSLVSAIFHAVPVAPEYVWVEAAGILGNISSIEEISERFFK 1253
+ + + + + FWA +L S I A+PVAPEY+WVEA I+ +I+ + +ERF K
Sbjct: 1476 EEKQSDSGS-SSGIHFWAGLNLASTISCAIPVAPEYIWVEAGEIVSDINGFKTRAERFLK 1534
Query: 1254 RALSVYPFSIKLWKCYYDLSKTKGDLN--TIVKAAREKGIEL 1293
+ALSVYP S+KLW+CY+ L K+ + I +AAR+KGI L
Sbjct: 1535 KALSVYPMSVKLWRCYWSLCKSIEERRGIEIEEAARKKGITL 1576
Score = 369 (135.0 bits), Expect = 4.4e-218, Sum P(3) = 4.4e-218
Identities = 110/363 (30%), Positives = 181/363 (49%)
Query: 354 RIQEAPFQIQ-DKCLVEKGLLEFHSTYHSKGNKFPTTMNHSTSVLLSPPILRGAFGHLKS 412
++Q +P + ++ +E+ L + + + ++ +SV LS P+ R HLK
Sbjct: 693 KLQGSPSEAPVERRSIEENSLNYQLSIDMESHRSSPENALLSSVALSGPLFRSTIYHLK- 751
Query: 413 ELCIALSNQSGNQHNHGRNFEIE-EVACVNSDKTQACYLIANSKPDIVKGYVGKEMGSYT 471
+ S+ + + G + ++ + + SDK Q C + + IV Y K++G YT
Sbjct: 752 ---VPGSSIT----SLGPEYILQNKTYSLYSDKRQ-CRSLTET---IV--YE-KKIGFYT 797
Query: 472 CNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDDSDSAGCQIGSTIPQEHC 531
CNL +DP WPLCMYELRG+CNNDEC WQH K F+D +LH ++GS+ Q+
Sbjct: 798 CNLKVDPSWPLCMYELRGRCNNDECSWQHFKDFSD--DSLHQSLHDPDGRVGSSSHQKTH 855
Query: 532 NVGTKLSKGHDILTPPTYIVGLDILKADSYQYQSVIARRHGLCWQKCLSVSLAISSIYPK 591
N +K S+ D + PTY+V LD +K DS+ Y+SV+A+RHG W K S LA S+ +
Sbjct: 856 N-SSKGSQILDSVFSPTYLVSLDTMKVDSWSYESVLAQRHGQIWCKHFSACLASSNSLYR 914
Query: 592 DLPADLSLIGDGRIECIGSWNRQSSFFRSRNGVLNKLKQV------ELSNEQCVEMALLI 645
++PA + +GRI +G+ SS+FR ++ ++ + Q L + E+ +
Sbjct: 915 NVPAKEN---EGRIVVLGNSKTYSSYFRIKHSLMWHIFQALSLLSQGLEGDPTSEILWAV 971
Query: 646 LNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYS-NTNSVGKDDMFSYSVKHN 704
+ EG + S ++ S ++W+ Y+ N + D S H
Sbjct: 972 YLLIYHAYEG-SDGKDMFSYGVKHSSRSYVIWLMYINSRGQLNDQLIAYDTALSALCNHA 1030
Query: 705 EGS 707
GS
Sbjct: 1031 SGS 1033
Score = 250 (93.1 bits), Expect = 4.4e-218, Sum P(3) = 4.4e-218
Identities = 71/189 (37%), Positives = 105/189 (55%)
Query: 65 AQEHRRICEIEERKALKAYRKAQRALIEANASCTKLYRQRELCSARFRSFVMDDSNLLWS 124
AQE +R+ EIEER ALK YRKAQR+LIEANA C +LY +RE+ SA + S ++ DS LLW
Sbjct: 437 AQERKRLFEIEERNALKVYRKAQRSLIEANARCAELYSKREILSAHYGSLIVRDSRLLWP 496
Query: 125 SGQHETLGNEFDLSKHVSGNMHLAPTSTHQMQSGYVGYNQGGYDSSMQCINGDLQNFSHE 184
S E F + +G++ LA T T Q + N Y+S + + S
Sbjct: 497 SIHGENPETGFHFLNNSTGSIDLA-TKTDIAQHSQLESNHK-YNS--EYVGSHPPPHSR- 551
Query: 185 HENGQNLGSEPCSEQDASTSELLPRKSKNALNGISPQSNELMVSADEEEEACQLDLESVQ 244
+GQNLG S+ ASTS+ LP +K + + S++ + D+E + +D ES +
Sbjct: 552 --SGQNLGY---SDLGASTSDGLPCGNKQTASRLCSPSSDANILPDDE--SFPVDHESTE 604
Query: 245 PNFEYQQKD 253
N +Q+++
Sbjct: 605 GNPGHQKEN 613
Score = 170 (64.9 bits), Expect = 4.5e-197, Sum P(3) = 4.5e-197
Identities = 49/156 (31%), Positives = 79/156 (50%)
Query: 257 EGRQISTDYRHNNKLSAVSSQDPLLLEATLRSELFARLGMRTFSKDSGSCFNVEPSVEQR 316
E + + ++ N + +Q+ LLLEA+LRS+LF RLGMR S+ G+CFN E +++
Sbjct: 601 ESTEGNPGHQKENIDQTLGNQNALLLEASLRSKLFDRLGMRAESR-GGTCFNEETVIDRG 659
Query: 317 ADNDIGSDKMQMSNGSVPSSGEQSQQHDIG-GTDKPERRIQEAPFQIQDKCLVEKGLLEF 375
+ D GS+ Q NGS P S + G +K + EAP + + +E+ L +
Sbjct: 660 DERDFGSEGTQRDNGS-PFSEIYLHNDSLEPGANKLQGSPSEAPVERRS---IEENSLNY 715
Query: 376 HSTYHSKGNKFPTTMNHSTSVLLSPPILRGAFGHLK 411
+ + ++ +SV LS P+ R HLK
Sbjct: 716 QLSIDMESHRSSPENALLSSVALSGPLFRSTIYHLK 751
Score = 43 (20.2 bits), Expect = 9.1e-28, Sum P(3) = 9.1e-28
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 638 CVEMALLILNQDANKLEGMKKA--LSLLSRALEADPTSEILWITY 680
C+E+ LL + +N+L+ M + LL + + + +W Y
Sbjct: 1203 CLELKLLAVRMQSNELKDMFSSGFEELLKQEAKEASCIQCIWNQY 1247
Score = 38 (18.4 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 645 ILNQDANKLEGMKKALSLLSRALE 668
I+ ++NKL+ +K+ ++L L+
Sbjct: 206 IVESNSNKLQDLKQQIALRESELK 229
>UNIPROTKB|E1C1R6 [details] [associations]
symbol:ZFC3H1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650 OMA:PKTLNFE
GeneTree:ENSGT00390000001116 EMBL:AADN02009847 IPI:IPI00583825
Ensembl:ENSGALT00000016545 Uniprot:E1C1R6
Length = 1696
Score = 160 (61.4 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 79/322 (24%), Positives = 143/322 (44%)
Query: 617 FFRSRNGVLNKLK---QVELSNEQC-VEMALLILNQ-DANKLEGMKKALSLLSRALEADP 671
+F S ++ L+ Q N Q +++A LNQ + + E + L++L+RALE +
Sbjct: 1045 YFTSETDDISNLEASVQENPCNVQLWIKLAYKYLNQNEGSSSECLDSTLNVLARALENNK 1104
Query: 672 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 731
+ +W YL +F +M +V++ SY +W ++N L D D
Sbjct: 1105 ENPEIWCHYLRLFSKRGTKEEIQEMCETAVEY-AASYQIWWTFLN----LESSFDGKDYV 1159
Query: 732 LS-VLCRCASASDGDEMHA--SACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSN 788
+L ++G+E + S +L+ L + +G + A+ + L A N
Sbjct: 1160 CGRILQFLMEVTEGEENPSLLSFQLLETLLYRVHLSLFTGRYQNALLLLQNALKSA---N 1216
Query: 789 DRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLEC------EKELFAIDW 842
++ +S+ LT +SD+ + W+ ++L+ + LP KE F I W
Sbjct: 1217 EK---IISERLT---LSDRCLAWLSYIHLIEFNTLPVKFYDPANVGPSRIMNKEPFLIPW 1270
Query: 843 PPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAV--NHIWCMAVLNG 900
VQ D K L+ M ++V+ ++ E+LE + R A CF + N I + +L
Sbjct: 1271 QTVQ---DVKTDPDTLLAMFEDAVKTCTD-ENLEADK--RIAVCFPLYRNMIALLKLLER 1324
Query: 901 LECSMNLLEKYIKLYPS-CLEL 921
E ++ L ++L P+ CL L
Sbjct: 1325 WESAVELCRSLLELCPNNCLLL 1346
Score = 98 (39.6 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 467 MGSYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 514
+ S T + I+P C ++L G CN+D+C WQH+K K L D
Sbjct: 878 LSSVTYSNMIEPKQCFCRFDLTGTCNDDDCQWQHMKDCTLSRKQLFQD 925
Score = 51 (23.0 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 1252 FKRALSVYPFSIKLWK--CYYDLS---KTKGDLNTIVKAAREKGIELD 1294
++RAL P LWK ++ S KT +L +V +E G+ LD
Sbjct: 1635 YQRALHKLPLCATLWKDQLLFEASGGGKTD-NLRKLVSKCQEVGVSLD 1681
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1162 KLKDLVDFVEGIMEIVPSNYQLAFS 1186
+ K D V + VP+ Y + FS
Sbjct: 1512 EFKVFTDLVNRCLVTVPTRYPIPFS 1536
>UNIPROTKB|O60293 [details] [associations]
symbol:ZFC3H1 "Zinc finger C3H1 domain-containing protein"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003107 InterPro:IPR013026
PROSITE:PS50005 PROSITE:PS50103 PROSITE:PS50293 SMART:SM00386
GO:GO:0046872 GO:GO:0005622 GO:GO:0006396 eggNOG:NOG274922
InterPro:IPR019607 Pfam:PF10650 EMBL:AB011118 EMBL:BC064336
EMBL:BC073843 EMBL:AK125035 IPI:IPI00059925 IPI:IPI00175146
IPI:IPI00743894 PIR:T00325 RefSeq:NP_659419.3 UniGene:Hs.527874
ProteinModelPortal:O60293 IntAct:O60293 MINT:MINT-1481977
STRING:O60293 PhosphoSite:O60293 PaxDb:O60293 PRIDE:O60293
DNASU:196441 Ensembl:ENST00000378743 Ensembl:ENST00000548100
Ensembl:ENST00000552994 GeneID:196441 KEGG:hsa:196441
UCSC:uc001swo.2 UCSC:uc001swp.3 CTD:196441 GeneCards:GC12M072003
H-InvDB:HIX0010820 HGNC:HGNC:28328 HPA:HPA007072 HPA:HPA007151
neXtProt:NX_O60293 PharmGKB:PA164727644 HOGENOM:HOG000060198
HOVERGEN:HBG095534 InParanoid:O60293 OMA:PKTLNFE OrthoDB:EOG4CNQQ7
GenomeRNAi:196441 NextBio:89476 ArrayExpress:O60293 Bgee:O60293
CleanEx:HS_ZFC3H1 Genevestigator:O60293 Uniprot:O60293
Length = 1989
Score = 131 (51.2 bits), Expect = 2.0e-07, Sum P(6) = 2.0e-07
Identities = 71/331 (21%), Positives = 135/331 (40%)
Query: 617 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 671
+F + + L+ L N V++ L + LNQ+ + E + AL++L+RALE +
Sbjct: 1339 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGECSESLDSALNVLARALENNK 1398
Query: 672 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 731
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1399 DNPEIWCHYLRLFSKRGTKDEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1457
Query: 732 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 791
L L A + + S +L+ L +Q +G + A+ + L A ND
Sbjct: 1458 LEFLMGAAKQETSNIL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKSA---ND-- 1510
Query: 792 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLE------CEKELFAIDWPPV 845
+ L SD+ + W+ ++L+ + LP E F + W V
Sbjct: 1511 ----GIVAEYLKTSDRCLAWLAYIHLIEFNILPSKFYDPSNDNPSRIVNTESFVMPWQAV 1566
Query: 846 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 905
Q D K L+ + ++V+ ++ ESL E + + N I +L E +M
Sbjct: 1567 Q---DVKTNPDMLLAVFEDAVKACTD-ESLAVEERIEACLPLYTNMIALHQLLERYEAAM 1622
Query: 906 NLLEKYIKLYP-SC--LE-LVLMKARLQKHD 932
L + ++ P +C LE LV + + +HD
Sbjct: 1623 ELCKSLLESCPINCQLLEALVALYLQTNQHD 1653
Score = 96 (38.9 bits), Expect = 2.0e-07, Sum P(6) = 2.0e-07
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 469 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 514
SY+ N+ I+P C ++L G CN+D+C WQH++ + K L D
Sbjct: 1174 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHIQDYTLSRKQLFQD 1217
Score = 54 (24.1 bits), Expect = 2.0e-07, Sum P(6) = 2.0e-07
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1250 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1294
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1926 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1974
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(6) = 2.0e-07
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 177 DLQNFSHEHENGQNL-GSEPCSEQDASTSEL---LPRKSKNALNGISPQSNELMVSADEE 232
DL N ++ L G + S +S +L L ++ ++ GI N V+ D +
Sbjct: 477 DLSNQEEQYNRFMKLVGGKRRSRSKSSDPDLRRSLDKQPTDSGGGIYQYDNYEEVAMDTD 536
Query: 233 EEACQLDLESVQPNF 247
E VQP F
Sbjct: 537 SETSSPAPSPVQPPF 551
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(6) = 2.0e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 124 SSGQHETLGNEFDLSKHVSGNMHLAPTSTHQ 154
SS + L N F S+H S HL S+++
Sbjct: 76 SSSSQQQLRN-FSRSRHASERGHLRGPSSYR 105
Score = 41 (19.5 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 65 AQEHRRICEIEERKALKAYR-KAQRAL 90
A E RR+ ++E ALK + K RAL
Sbjct: 963 AMEKRRLQKLEYEYALKIQKLKEARAL 989
Score = 39 (18.8 bits), Expect = 2.0e-07, Sum P(6) = 2.0e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1158 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1186
RN + K D V + VP+ Y + FS
Sbjct: 1800 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1829
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(6) = 2.5e-07
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1029 VMFGYLNLSLHRLLQNDWNE 1048
VM L+L RLLQ++W E
Sbjct: 1866 VMPANSGLAL-RLLQHEWEE 1884
>UNIPROTKB|E1BIV7 [details] [associations]
symbol:LOC781886 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006396 "RNA processing" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR003107 InterPro:IPR013026
PROSITE:PS50293 SMART:SM00386 GO:GO:0005622 GO:GO:0006396
InterPro:IPR019607 Pfam:PF10650 OMA:PKTLNFE EMBL:DAAA02012288
IPI:IPI00710308 RefSeq:XP_003586079.1 Ensembl:ENSBTAT00000030417
GeneID:781886 KEGG:bta:781886 GeneTree:ENSGT00390000001116
Uniprot:E1BIV7
Length = 1988
Score = 122 (48.0 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 79/395 (20%), Positives = 156/395 (39%)
Query: 617 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 671
+F + + L+ L N V++ L + LNQ+ E + AL++L+RALE +
Sbjct: 1338 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGLCSESLDSALNVLARALENNK 1397
Query: 672 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 731
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1398 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1456
Query: 732 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 791
+ L A D + S +L+ L +Q +G + A+ + L AT
Sbjct: 1457 VEFLMGAAKREASDTL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKLATDGR--- 1511
Query: 792 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 845
+ L SD+ + W+ ++L+ + LP E F + W V
Sbjct: 1512 ------VAEYLKTSDRCLAWLAYIHLIEFNILPSKFYDPSNANPSRIVNIEPFVMPWQAV 1565
Query: 846 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 905
Q D K L + ++V+ ++ ESL E + + N I +L E ++
Sbjct: 1566 Q---DVKTNPDMLFAVFEDAVKACTD-ESLTVEERVETCVPLYTNMIVLHQLLERYEAAV 1621
Query: 906 NLLEKYIKLYP-SCLELVLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQCIWNQYVE 964
L + ++ P +C L + A K + D + + A K P+ + ++
Sbjct: 1622 ELCKCLLESCPMNCQLLESLAALYLKMNQQDKARAVWVTAFEKSPQNA---EVFYHTCKF 1678
Query: 965 YALQNGRHDFAAELMDRWFHSVWKV---QYSQVEI 996
+ LQN R D + ++ S +K +YS +++
Sbjct: 1679 FILQN-RGDNLLPFLRKFIASFFKPGFEKYSNLDL 1712
Score = 100 (40.3 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 469 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDDSDS-----AGCQIG 523
SY+ N+ I+P C ++L G CN+D+C WQH + + K L D S GC G
Sbjct: 1173 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHTQDYTLSRKQLFQDVLSYNLSLIGCSEG 1230
Query: 524 ST 525
ST
Sbjct: 1231 ST 1232
Score = 54 (24.1 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1250 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1294
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1925 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1973
Score = 43 (20.2 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 177 DLQNFSHEHENGQNL-GSEPCSEQDASTSEL---LPRKSKNALNGISPQSNELMVSADEE 232
DL N ++ L G + S +S +L L +++ ++ GI N V+ D +
Sbjct: 476 DLSNQEEQYNRFMKLVGGKRRSRSKSSDPDLRRSLDKQATDSGGGIYQYDNYEEVAMDTD 535
Query: 233 EEACQLDLESVQPNF 247
E VQP F
Sbjct: 536 SETNSPAPSPVQPPF 550
Score = 41 (19.5 bits), Expect = 7.7e-07, Sum P(5) = 7.7e-07
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 65 AQEHRRICEIEERKALKAYR-KAQRAL 90
A E RR+ ++E ALK + K RAL
Sbjct: 962 AMEKRRLQKLEYEYALKIQKLKEARAL 988
Score = 39 (18.8 bits), Expect = 4.9e-07, Sum P(5) = 4.9e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1158 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1186
RN + K D V + VP+ Y + FS
Sbjct: 1799 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1828
Score = 37 (18.1 bits), Expect = 7.7e-07, Sum P(5) = 7.7e-07
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 1040 RLLQNDWNE 1048
RLLQ++W E
Sbjct: 1875 RLLQHEWEE 1883
>UNIPROTKB|E2QSB0 [details] [associations]
symbol:ZFC3H1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650
Ensembl:ENSCAFT00000000728 Uniprot:E2QSB0
Length = 1984
Score = 123 (48.4 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 68/331 (20%), Positives = 132/331 (39%)
Query: 617 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQ-DANKLEGMKKALSLLSRALEADP 671
+F + + L+ L N V++ L + LNQ D E + AL++L+RALE +
Sbjct: 1334 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNDGLCSESLDSALNVLARALENNK 1393
Query: 672 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 731
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1394 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1452
Query: 732 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 791
+ L A D + S +L+ L +Q +G + A+ + L A G
Sbjct: 1453 VEFLMGAAKQEASDVL--SFQLLEALLFRVQLHIFTGRCQSALAVLQNALKSANGGI--- 1507
Query: 792 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 845
+ L D+ + W+ ++L+ + LP E F + W V
Sbjct: 1508 ------VAEYLKTGDRCLAWLAYIHLIEFNVLPSKFYDPSNANPSRIVNTESFVMPWQAV 1561
Query: 846 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 905
Q D K L+ + ++V+ ++ E+L E + N I +L E ++
Sbjct: 1562 Q---DVKTNPDMLLAVFEDAVKACTD-ENLTVEERVEVCVPLYTNMIALHQLLERYEAAV 1617
Query: 906 NLLEKYIKLYP-SC--LE-LVLMKARLQKHD 932
L ++ ++ P +C LE LV + + +HD
Sbjct: 1618 ELCKRLLETCPMNCQLLEALVALYLQTDQHD 1648
Score = 93 (37.8 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 469 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 514
SY+ N+ I+P C ++L G CN+D+C WQH + + K L D
Sbjct: 1169 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHTQDYTLSRKQLFQD 1212
Score = 54 (24.1 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1250 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1294
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1921 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1969
Score = 41 (19.5 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 65 AQEHRRICEIEERKALKAYR-KAQRAL 90
A E RR+ ++E ALK + K RAL
Sbjct: 958 AMEKRRLQKLEYEYALKIQKLKEARAL 984
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1158 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1186
RN + K D V + VP+ Y + FS
Sbjct: 1795 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1824
Score = 37 (18.1 bits), Expect = 4.3e-06, Sum P(5) = 4.3e-06
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 1040 RLLQNDWNE 1048
RLLQ++W E
Sbjct: 1871 RLLQHEWEE 1879
>UNIPROTKB|F6UU41 [details] [associations]
symbol:ZFC3H1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650 CTD:196441
OMA:PKTLNFE GeneTree:ENSGT00390000001116 Ensembl:ENSCAFT00000000728
EMBL:AAEX03007066 RefSeq:XP_531679.3 GeneID:474449 KEGG:cfa:474449
Uniprot:F6UU41
Length = 1994
Score = 123 (48.4 bits), Expect = 2.9e-06, Sum P(5) = 2.9e-06
Identities = 68/331 (20%), Positives = 132/331 (39%)
Query: 617 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQ-DANKLEGMKKALSLLSRALEADP 671
+F + + L+ L N V++ L + LNQ D E + AL++L+RALE +
Sbjct: 1344 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNDGLCSESLDSALNVLARALENNK 1403
Query: 672 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 731
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1404 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1462
Query: 732 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 791
+ L A D + S +L+ L +Q +G + A+ + L A G
Sbjct: 1463 VEFLMGAAKQEASDVL--SFQLLEALLFRVQLHIFTGRCQSALAVLQNALKSANGGI--- 1517
Query: 792 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 845
+ L D+ + W+ ++L+ + LP E F + W V
Sbjct: 1518 ------VAEYLKTGDRCLAWLAYIHLIEFNVLPSKFYDPSNANPSRIVNTESFVMPWQAV 1571
Query: 846 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 905
Q D K L+ + ++V+ ++ E+L E + N I +L E ++
Sbjct: 1572 Q---DVKTNPDMLLAVFEDAVKACTD-ENLTVEERVEVCVPLYTNMIALHQLLERYEAAV 1627
Query: 906 NLLEKYIKLYP-SC--LE-LVLMKARLQKHD 932
L ++ ++ P +C LE LV + + +HD
Sbjct: 1628 ELCKRLLETCPMNCQLLEALVALYLQTDQHD 1658
Score = 93 (37.8 bits), Expect = 2.9e-06, Sum P(5) = 2.9e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 469 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 514
SY+ N+ I+P C ++L G CN+D+C WQH + + K L D
Sbjct: 1179 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHTQDYTLSRKQLFQD 1222
Score = 54 (24.1 bits), Expect = 2.9e-06, Sum P(5) = 2.9e-06
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1250 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1294
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1931 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1979
Score = 41 (19.5 bits), Expect = 2.9e-06, Sum P(5) = 2.9e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 65 AQEHRRICEIEERKALKAYR-KAQRAL 90
A E RR+ ++E ALK + K RAL
Sbjct: 968 AMEKRRLQKLEYEYALKIQKLKEARAL 994
Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(5) = 2.9e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1158 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1186
RN + K D V + VP+ Y + FS
Sbjct: 1805 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1834
Score = 37 (18.1 bits), Expect = 4.4e-06, Sum P(5) = 4.4e-06
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 1040 RLLQNDWNE 1048
RLLQ++W E
Sbjct: 1881 RLLQHEWEE 1889
>UNIPROTKB|E9PTM2 [details] [associations]
symbol:E9PTM2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650
GeneTree:ENSGT00390000001116 IPI:IPI00776597
Ensembl:ENSRNOT00000005541 ArrayExpress:E9PTM2 Uniprot:E9PTM2
Length = 1993
Score = 107 (42.7 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 65/320 (20%), Positives = 121/320 (37%)
Query: 617 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 671
+F S + L+ L N V++ L + LNQ+ E + AL++L+RALE +
Sbjct: 1343 YFTSETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGLCSESLDSALNVLARALENNK 1402
Query: 672 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 731
+ +W YL +F +M +V++ Y + +++ + + +
Sbjct: 1403 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAP-DYQSFCTFLHLESTFEEKDYVCERM 1461
Query: 732 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 791
+ L A D + S +L+ L +Q +G + A+ + L A ND
Sbjct: 1462 VEFLMGAAKRETSDIL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKLA---ND-- 1514
Query: 792 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 845
+ + L D+ + W+ ++L+ + LP + E F + W
Sbjct: 1515 ----AIVAEYLRTEDRCLAWLAYIHLIEFNSLPSKLYDPSNANPSRIVNTEPFVMPWQAA 1570
Query: 846 QLEDDEKQRAIKLIEMAVNSV--ELYSNGESLEK----ETNLRSAHCFAVNHI----WCM 895
Q + + E AV + E ++GE E TN+ + H C
Sbjct: 1571 QDVKTNPDLLLAVFEDAVKACTDEALTSGERTEVCLPLYTNMMALHQLLERDEEAVELCK 1630
Query: 896 AVLNGLECSMNLLEKYIKLY 915
++L + LLE LY
Sbjct: 1631 SLLESCPTNCQLLETLAALY 1650
Score = 97 (39.2 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 469 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 514
SY+ N+ I+P C ++L G CN+D+C WQHV+ + K L D
Sbjct: 1178 SYS-NM-IEPDQCFCRFDLAGTCNDDDCQWQHVQDYTLSRKQLFQD 1221
Score = 54 (24.1 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1250 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1294
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1930 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1978
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1158 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1186
RN + K D V + VP+ Y + FS
Sbjct: 1804 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1833
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1029 VMFGYLNLSLHRLLQNDWNE 1048
VM L+L RLLQ++W E
Sbjct: 1870 VMPANSRLAL-RLLQHEWEE 1888
>UNIPROTKB|F1MAP0 [details] [associations]
symbol:F1MAP0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650
GeneTree:ENSGT00390000001116 IPI:IPI00360186
Ensembl:ENSRNOT00000058444 ArrayExpress:F1MAP0 Uniprot:F1MAP0
Length = 1993
Score = 107 (42.7 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 65/320 (20%), Positives = 121/320 (37%)
Query: 617 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 671
+F S + L+ L N V++ L + LNQ+ E + AL++L+RALE +
Sbjct: 1343 YFTSETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGLCSESLDSALNVLARALENNK 1402
Query: 672 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 731
+ +W YL +F +M +V++ Y + +++ + + +
Sbjct: 1403 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAP-DYQSFCTFLHLESTFEEKDYVCERM 1461
Query: 732 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 791
+ L A D + S +L+ L +Q +G + A+ + L A ND
Sbjct: 1462 VEFLMGAAKRETSDIL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKLA---ND-- 1514
Query: 792 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 845
+ + L D+ + W+ ++L+ + LP + E F + W
Sbjct: 1515 ----AIVAEYLRTEDRCLAWLAYIHLIEFNSLPSKLYDPSNANPSRIVNTEPFVMPWQAA 1570
Query: 846 QLEDDEKQRAIKLIEMAVNSV--ELYSNGESLEK----ETNLRSAHCFAVNHI----WCM 895
Q + + E AV + E ++GE E TN+ + H C
Sbjct: 1571 QDVKTNPDLLLAVFEDAVKACTDEALTSGERTEVCLPLYTNMMALHQLLERDEEAVELCK 1630
Query: 896 AVLNGLECSMNLLEKYIKLY 915
++L + LLE LY
Sbjct: 1631 SLLESCPTNCQLLETLAALY 1650
Score = 97 (39.2 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 469 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 514
SY+ N+ I+P C ++L G CN+D+C WQHV+ + K L D
Sbjct: 1178 SYS-NM-IEPDQCFCRFDLAGTCNDDDCQWQHVQDYTLSRKQLFQD 1221
Score = 54 (24.1 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1250 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1294
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1930 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1978
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1158 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1186
RN + K D V + VP+ Y + FS
Sbjct: 1804 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1833
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1029 VMFGYLNLSLHRLLQNDWNE 1048
VM L+L RLLQ++W E
Sbjct: 1870 VMPANSRLAL-RLLQHEWEE 1888
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1294 1235 0.00078 124 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 628 (67 KB)
Total size of DFA: 609 KB (2270 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 109.66u 0.12s 109.78t Elapsed: 00:00:06
Total cpu time: 109.66u 0.12s 109.78t Elapsed: 00:00:06
Start: Tue May 21 08:04:16 2013 End: Tue May 21 08:04:22 2013