Query 000773
Match_columns 1293
No_of_seqs 675 out of 5038
Neff 8.4
Searched_HMMs 46136
Date Mon Apr 1 23:23:37 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000773.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000773hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 1E-194 3E-199 1772.9 91.6 1211 1-1293 143-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 5E-191 1E-195 1877.8 129.2 1274 1-1293 193-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 8E-168 2E-172 1667.5 122.5 1206 1-1292 89-1393(1394)
4 KOG0061 Transporter, ABC super 100.0 1.1E-93 2.3E-98 881.1 57.5 576 691-1293 22-612 (613)
5 PLN03211 ABC transporter G-25; 100.0 4.4E-93 9.5E-98 885.6 62.8 583 691-1290 36-659 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 2.5E-91 5.4E-96 873.1 60.7 565 718-1293 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 1.1E-88 2.5E-93 907.5 63.2 590 691-1291 26-696 (1394)
8 PLN03140 ABC transporter G fam 100.0 3.9E-88 8.5E-93 896.4 60.8 591 690-1290 127-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 2.2E-82 4.8E-87 781.0 41.0 564 719-1292 127-733 (1391)
10 KOG0061 Transporter, ABC super 100.0 2.4E-74 5.3E-79 709.5 50.9 547 1-597 58-608 (613)
11 TIGR00955 3a01204 The Eye Pigm 100.0 2.7E-73 5.8E-78 710.8 54.6 552 1-596 53-612 (617)
12 PLN03211 ABC transporter G-25; 100.0 8.6E-72 1.9E-76 694.8 55.9 548 1-597 96-658 (659)
13 KOG0054 Multidrug resistance-a 100.0 3.2E-71 6.9E-76 703.0 37.0 740 1-933 549-1358(1381)
14 TIGR01257 rim_protein retinal- 100.0 2.4E-67 5.2E-72 695.7 65.7 222 695-943 1938-2161(2272)
15 KOG0055 Multidrug/pheromone ex 100.0 1.5E-67 3.2E-72 652.6 51.7 215 692-933 985-1209(1228)
16 PLN03130 ABC transporter C fam 100.0 3.5E-63 7.6E-68 668.8 54.5 211 694-933 1237-1457(1622)
17 COG1123 ATPase components of v 100.0 2.1E-63 4.5E-68 578.6 42.3 203 719-932 303-514 (539)
18 PLN03232 ABC transporter C fam 100.0 6E-62 1.3E-66 658.0 54.6 211 694-933 1234-1454(1495)
19 PRK13549 xylose transporter AT 100.0 5.5E-62 1.2E-66 599.2 41.5 208 720-935 275-492 (506)
20 TIGR00957 MRP_assoc_pro multi 100.0 7.2E-61 1.6E-65 648.5 55.6 211 694-933 1284-1504(1522)
21 PRK10762 D-ribose transporter 100.0 9.8E-62 2.1E-66 596.3 42.3 204 722-934 267-481 (501)
22 PRK10261 glutathione transport 100.0 1.6E-61 3.4E-66 605.6 42.7 226 695-933 314-549 (623)
23 PRK09700 D-allose transporter 100.0 1.9E-61 4.1E-66 595.6 40.3 202 722-932 278-493 (510)
24 PRK15439 autoinducer 2 ABC tra 100.0 4.2E-61 9.1E-66 590.7 41.6 204 722-934 278-489 (510)
25 PRK15134 microcin C ABC transp 100.0 4.6E-61 1E-65 594.2 42.1 202 720-932 299-510 (529)
26 TIGR03269 met_CoM_red_A2 methy 100.0 9E-61 1.9E-65 591.1 43.3 200 720-932 297-512 (520)
27 TIGR01271 CFTR_protein cystic 100.0 1.4E-59 3.1E-64 633.6 56.5 210 694-933 1217-1436(1490)
28 PTZ00265 multidrug resistance 100.0 1.3E-59 2.9E-64 628.1 53.4 216 694-932 1165-1447(1466)
29 TIGR02633 xylG D-xylose ABC tr 100.0 2.6E-60 5.7E-65 584.6 42.9 206 720-933 273-488 (500)
30 PRK11288 araG L-arabinose tran 100.0 2.8E-60 6.1E-65 583.3 41.2 205 721-934 267-482 (501)
31 PTZ00243 ABC transporter; Prov 100.0 6.2E-59 1.4E-63 627.1 57.0 211 694-933 1308-1529(1560)
32 PRK10982 galactose/methyl gala 100.0 2.8E-59 6E-64 573.7 39.9 204 721-933 262-476 (491)
33 PRK10938 putative molybdenum t 100.0 4.6E-58 9.9E-63 563.3 36.7 204 718-930 271-485 (490)
34 COG4172 ABC-type uncharacteriz 100.0 8E-57 1.7E-61 488.5 37.8 203 720-933 300-512 (534)
35 PRK11819 putative ABC transpor 100.0 9E-56 2E-60 548.6 39.6 200 695-931 325-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 4.7E-55 1E-59 540.8 43.2 198 694-932 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.5E-55 9.7E-60 542.5 42.9 200 695-931 323-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 1.7E-54 3.6E-59 533.3 36.1 197 722-946 354-554 (590)
39 PRK10636 putative ABC transpor 100.0 9E-53 2E-57 526.6 40.5 196 695-932 313-512 (638)
40 PRK11147 ABC transporter ATPas 100.0 2.4E-52 5.2E-57 524.6 39.9 201 695-932 320-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.8E-51 3.9E-56 476.1 37.9 203 722-933 274-486 (500)
42 COG0488 Uup ATPase components 100.0 1.1E-49 2.3E-54 476.0 38.5 206 2-234 32-239 (530)
43 PLN03073 ABC transporter F fam 100.0 6.3E-49 1.4E-53 491.6 44.1 200 694-932 508-709 (718)
44 COG3845 ABC-type uncharacteriz 100.0 3.1E-47 6.6E-52 429.6 36.6 207 720-934 271-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 5.9E-47 1.3E-51 383.8 20.1 211 711-932 6-220 (240)
46 COG1127 Ttg2A ABC-type transpo 100.0 1.3E-43 2.8E-48 365.3 19.6 222 714-946 15-248 (263)
47 COG1135 AbcC ABC-type metal io 100.0 1.8E-43 4E-48 376.7 19.2 203 719-933 18-227 (339)
48 COG1120 FepC ABC-type cobalami 100.0 1.6E-43 3.6E-48 380.5 18.0 221 713-943 8-236 (258)
49 COG3638 ABC-type phosphate/pho 100.0 3.5E-43 7.7E-48 361.0 17.9 208 718-935 15-235 (258)
50 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.6E-43 1.7E-47 372.9 21.2 217 694-934 4-224 (254)
51 COG1131 CcmA ABC-type multidru 100.0 6.7E-43 1.5E-47 395.1 21.9 209 712-932 9-221 (293)
52 COG1116 TauB ABC-type nitrate/ 100.0 4.2E-43 9.1E-48 368.6 18.3 194 716-922 12-206 (248)
53 COG1125 OpuBA ABC-type proline 100.0 2.8E-43 6.2E-48 363.1 16.4 210 712-933 6-221 (309)
54 COG4555 NatA ABC-type Na+ tran 100.0 5.2E-43 1.1E-47 348.9 15.8 210 712-933 6-218 (245)
55 COG1118 CysA ABC-type sulfate/ 100.0 2.8E-42 6.2E-47 366.3 17.1 213 711-933 6-223 (345)
56 COG1136 SalX ABC-type antimicr 100.0 2.2E-41 4.8E-46 356.8 22.8 193 720-925 18-219 (226)
57 COG1117 PstB ABC-type phosphat 100.0 1.9E-41 4.1E-46 341.4 18.3 212 713-933 13-233 (253)
58 COG3839 MalK ABC-type sugar tr 100.0 8.8E-42 1.9E-46 381.3 17.6 210 712-933 8-219 (338)
59 COG1126 GlnQ ABC-type polar am 100.0 1.4E-41 3E-46 344.8 16.7 205 1-256 30-238 (240)
60 COG1137 YhbG ABC-type (unclass 100.0 3.6E-42 7.7E-47 342.5 10.0 213 711-933 8-224 (243)
61 COG3842 PotA ABC-type spermidi 100.0 1.8E-41 3.9E-46 380.8 16.7 210 713-933 11-222 (352)
62 TIGR01257 rim_protein retinal- 100.0 3.9E-36 8.5E-41 399.7 68.7 215 694-932 928-1144(2272)
63 COG2884 FtsE Predicted ATPase 100.0 2.2E-40 4.7E-45 327.8 20.0 199 720-931 15-220 (223)
64 KOG0927 Predicted transporter 100.0 1.4E-39 3E-44 367.7 27.0 185 721-932 404-591 (614)
65 PRK13537 nodulation ABC transp 100.0 8.9E-40 1.9E-44 373.8 22.3 204 717-932 17-222 (306)
66 COG1124 DppF ABC-type dipeptid 100.0 1.7E-39 3.7E-44 337.3 18.9 199 721-933 21-227 (252)
67 COG4152 ABC-type uncharacteriz 100.0 2.5E-39 5.4E-44 331.7 18.7 210 710-932 5-214 (300)
68 TIGR02314 ABC_MetN D-methionin 100.0 7.5E-39 1.6E-43 368.2 24.8 202 720-933 18-226 (343)
69 PRK11650 ugpC glycerol-3-phosp 100.0 3.6E-39 7.8E-44 374.4 21.9 204 718-933 15-220 (356)
70 COG3840 ThiQ ABC-type thiamine 100.0 3E-39 6.6E-44 316.4 16.4 197 725-933 17-215 (231)
71 PRK13536 nodulation factor exp 100.0 7.5E-39 1.6E-43 369.4 22.7 205 716-932 50-256 (340)
72 TIGR03265 PhnT2 putative 2-ami 100.0 5.8E-39 1.3E-43 372.2 21.8 205 717-933 14-220 (353)
73 cd03261 ABC_Org_Solvent_Resist 100.0 8.2E-39 1.8E-43 354.7 21.8 205 717-932 10-221 (235)
74 COG0411 LivG ABC-type branched 100.0 2E-39 4.4E-44 337.1 15.7 215 710-933 7-235 (250)
75 PRK11432 fbpC ferric transport 100.0 7.9E-39 1.7E-43 370.3 21.7 214 695-933 7-222 (351)
76 TIGR01188 drrA daunorubicin re 100.0 1.1E-38 2.4E-43 365.5 22.1 204 717-932 3-208 (302)
77 TIGR03258 PhnT 2-aminoethylpho 100.0 1.1E-38 2.4E-43 370.2 21.6 214 695-933 6-224 (362)
78 PRK10851 sulfate/thiosulfate t 100.0 1.4E-38 3.1E-43 368.9 21.4 208 717-933 12-222 (353)
79 COG1135 AbcC ABC-type metal io 100.0 6.1E-39 1.3E-43 342.2 16.7 207 1-258 34-246 (339)
80 COG0410 LivF ABC-type branched 100.0 1.1E-38 2.4E-43 329.2 17.3 210 711-933 7-222 (237)
81 cd03259 ABC_Carb_Solutes_like 100.0 2.5E-38 5.5E-43 345.4 21.3 202 717-930 10-213 (213)
82 TIGR01186 proV glycine betaine 100.0 3.9E-38 8.4E-43 364.0 23.0 205 717-933 3-215 (363)
83 COG1122 CbiO ABC-type cobalt t 100.0 2.3E-38 4.9E-43 342.2 19.5 214 695-932 4-223 (235)
84 cd03293 ABC_NrtD_SsuB_transpor 100.0 5E-38 1.1E-42 344.7 22.3 200 720-932 17-218 (220)
85 COG4559 ABC-type hemin transpo 100.0 4.1E-38 8.9E-43 316.4 19.6 227 695-944 2-239 (259)
86 PRK09452 potA putrescine/sperm 100.0 3.5E-38 7.5E-43 367.2 21.9 214 695-933 15-230 (375)
87 TIGR00960 3a0501s02 Type II (G 100.0 5.8E-38 1.3E-42 343.3 22.0 194 720-925 16-215 (216)
88 TIGR01288 nodI ATP-binding ABC 100.0 4.6E-38 9.9E-43 360.6 22.1 204 717-932 14-219 (303)
89 cd03269 ABC_putative_ATPase Th 100.0 5.7E-38 1.2E-42 341.8 21.6 200 718-930 11-210 (210)
90 COG1125 OpuBA ABC-type proline 100.0 1.7E-38 3.7E-43 327.8 16.1 194 1-235 29-225 (309)
91 cd03265 ABC_DrrA DrrA is the A 100.0 5.5E-38 1.2E-42 344.4 21.3 204 717-932 10-216 (220)
92 COG1120 FepC ABC-type cobalami 100.0 1.1E-38 2.3E-43 343.3 14.5 196 1-235 30-228 (258)
93 PRK11607 potG putrescine trans 100.0 6.6E-38 1.4E-42 365.6 21.9 215 694-933 19-235 (377)
94 cd03301 ABC_MalK_N The N-termi 100.0 8.9E-38 1.9E-42 341.3 21.6 201 718-930 11-213 (213)
95 COG3840 ThiQ ABC-type thiamine 100.0 1.9E-38 4.1E-43 310.8 14.4 191 1-234 27-218 (231)
96 TIGR03522 GldA_ABC_ATP gliding 100.0 7.2E-38 1.6E-42 358.3 21.6 204 716-932 11-216 (301)
97 PRK09536 btuD corrinoid ABC tr 100.0 5.7E-38 1.2E-42 367.0 20.9 208 716-933 12-224 (402)
98 cd03296 ABC_CysA_sulfate_impor 100.0 1E-37 2.3E-42 346.6 21.9 206 718-932 13-221 (239)
99 PRK11000 maltose/maltodextrin 100.0 8.6E-38 1.9E-42 365.6 22.2 205 717-933 13-219 (369)
100 cd03219 ABC_Mj1267_LivG_branch 100.0 1.2E-37 2.6E-42 346.0 21.7 207 717-932 10-227 (236)
101 cd03266 ABC_NatA_sodium_export 100.0 1.2E-37 2.6E-42 341.6 21.1 198 721-930 19-218 (218)
102 PRK11153 metN DL-methionine tr 100.0 1.3E-37 2.8E-42 361.4 22.4 202 720-933 18-226 (343)
103 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-37 3.3E-42 344.2 21.5 205 717-933 10-218 (232)
104 cd03260 ABC_PstB_phosphate_tra 100.0 1.3E-37 2.9E-42 343.3 20.9 206 717-933 10-225 (227)
105 cd03268 ABC_BcrA_bacitracin_re 100.0 1.2E-37 2.6E-42 338.8 20.1 197 718-930 11-208 (208)
106 cd03226 ABC_cobalt_CbiO_domain 100.0 9E-38 2E-42 338.7 19.0 196 716-927 8-205 (205)
107 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.6E-37 3.5E-42 350.2 21.7 211 710-932 27-245 (269)
108 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-37 2.8E-42 341.3 20.1 193 720-925 17-217 (218)
109 COG3839 MalK ABC-type sugar tr 100.0 5.5E-38 1.2E-42 350.8 17.1 192 1-235 31-223 (338)
110 cd03234 ABCG_White The White s 100.0 5.6E-37 1.2E-41 337.7 24.8 221 695-930 4-226 (226)
111 COG1118 CysA ABC-type sulfate/ 100.0 5.6E-38 1.2E-42 333.6 15.9 194 1-235 30-227 (345)
112 cd03256 ABC_PhnC_transporter A 100.0 2.1E-37 4.5E-42 345.3 20.7 205 720-933 14-230 (241)
113 COG4525 TauB ABC-type taurine 100.0 2.3E-37 4.9E-42 306.1 18.4 200 721-933 19-220 (259)
114 cd03258 ABC_MetN_methionine_tr 100.0 2.9E-37 6.3E-42 342.0 21.4 200 721-932 19-225 (233)
115 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.1E-37 2.4E-42 333.3 17.1 193 1-235 32-227 (254)
116 cd03263 ABC_subfamily_A The AB 100.0 2.9E-37 6.2E-42 339.0 20.9 200 720-932 15-216 (220)
117 PRK09493 glnQ glutamine ABC tr 100.0 4.3E-37 9.3E-42 342.1 21.8 204 718-932 12-220 (240)
118 PRK11629 lolD lipoprotein tran 100.0 7.3E-37 1.6E-41 338.4 23.4 216 695-932 6-229 (233)
119 PRK11248 tauB taurine transpor 100.0 6.2E-37 1.3E-41 342.3 22.6 202 718-932 12-215 (255)
120 COG1131 CcmA ABC-type multidru 100.0 2.3E-37 5E-42 350.0 19.3 195 1-238 33-229 (293)
121 TIGR02315 ABC_phnC phosphonate 100.0 2.4E-37 5.1E-42 345.1 19.1 206 719-933 14-231 (243)
122 PRK11264 putative amino-acid A 100.0 6E-37 1.3E-41 343.3 22.2 204 718-932 14-228 (250)
123 TIGR02673 FtsE cell division A 100.0 3.9E-37 8.4E-42 336.5 20.1 194 719-924 14-213 (214)
124 COG3842 PotA ABC-type spermidi 100.0 6.7E-38 1.4E-42 352.0 14.3 207 1-257 33-240 (352)
125 COG3638 ABC-type phosphate/pho 100.0 3E-37 6.5E-42 317.4 17.8 201 1-236 32-238 (258)
126 COG1116 TauB ABC-type nitrate/ 100.0 1.9E-37 4E-42 326.1 16.6 177 1-222 31-207 (248)
127 PRK13637 cbiO cobalt transport 100.0 6E-37 1.3E-41 348.3 22.2 218 695-932 3-229 (287)
128 cd03224 ABC_TM1139_LivF_branch 100.0 4.1E-37 8.8E-42 338.5 19.9 202 717-932 10-216 (222)
129 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.7E-37 1.4E-41 340.8 21.5 201 720-932 14-220 (242)
130 PRK11831 putative ABC transpor 100.0 7.2E-37 1.6E-41 345.2 22.0 214 695-932 8-228 (269)
131 cd03292 ABC_FtsE_transporter F 100.0 5.7E-37 1.2E-41 335.3 20.2 194 720-925 14-213 (214)
132 cd03235 ABC_Metallic_Cations A 100.0 3.9E-37 8.5E-42 336.0 18.8 205 714-930 6-213 (213)
133 cd03264 ABC_drug_resistance_li 100.0 6.6E-37 1.4E-41 333.7 20.2 199 718-930 11-211 (211)
134 COG4555 NatA ABC-type Na+ tran 100.0 1.5E-37 3.3E-42 309.9 13.8 191 1-235 30-222 (245)
135 cd03262 ABC_HisP_GlnQ_permease 100.0 5.7E-37 1.2E-41 335.0 19.7 197 718-925 11-212 (213)
136 cd03225 ABC_cobalt_CbiO_domain 100.0 5.6E-37 1.2E-41 334.4 19.5 193 720-924 14-210 (211)
137 PRK10895 lipopolysaccharide AB 100.0 8E-37 1.7E-41 340.1 20.8 205 717-932 13-221 (241)
138 PRK13647 cbiO cobalt transport 100.0 1.1E-36 2.3E-41 344.1 21.6 214 695-932 5-222 (274)
139 COG4181 Predicted ABC-type tra 100.0 8.5E-37 1.8E-41 295.7 17.7 198 718-928 21-226 (228)
140 COG1127 Ttg2A ABC-type transpo 100.0 3.7E-37 8E-42 317.6 15.9 194 1-235 36-235 (263)
141 PRK10908 cell division protein 100.0 1.2E-36 2.7E-41 334.1 21.1 197 719-927 14-216 (222)
142 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-36 2.8E-41 336.1 21.3 199 721-930 19-228 (228)
143 PRK11247 ssuB aliphatic sulfon 100.0 9.7E-37 2.1E-41 339.8 20.4 205 695-932 13-218 (257)
144 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.6E-36 3.6E-41 336.3 21.9 202 718-932 12-216 (236)
145 PRK10070 glycine betaine trans 100.0 1.9E-36 4.2E-41 353.9 23.6 207 715-933 36-250 (400)
146 PRK13634 cbiO cobalt transport 100.0 1.2E-36 2.6E-41 346.3 21.3 217 695-932 3-230 (290)
147 PRK13651 cobalt transporter AT 100.0 1.2E-36 2.6E-41 347.1 21.3 219 695-933 3-250 (305)
148 PRK10619 histidine/lysine/argi 100.0 2E-36 4.4E-41 339.9 22.5 214 695-932 6-236 (257)
149 COG4604 CeuD ABC-type enteroch 100.0 1.3E-37 2.8E-42 308.7 11.3 215 710-934 4-222 (252)
150 PRK15079 oligopeptide ABC tran 100.0 3.4E-36 7.4E-41 346.5 24.7 230 694-933 8-247 (331)
151 TIGR00972 3a0107s01c2 phosphat 100.0 2.1E-36 4.4E-41 337.9 22.1 204 718-932 12-227 (247)
152 PRK13643 cbiO cobalt transport 100.0 3.6E-36 7.9E-41 342.1 24.4 218 695-933 2-229 (288)
153 TIGR03740 galliderm_ABC gallid 100.0 2.3E-36 5.1E-41 332.2 22.1 200 718-934 11-210 (223)
154 PRK11124 artP arginine transpo 100.0 1.9E-36 4E-41 337.4 21.3 203 718-932 13-225 (242)
155 PRK13641 cbiO cobalt transport 100.0 2.1E-36 4.5E-41 344.2 22.0 202 720-933 20-230 (287)
156 TIGR02211 LolD_lipo_ex lipopro 100.0 2.5E-36 5.4E-41 331.8 21.6 195 720-927 18-220 (221)
157 PRK13631 cbiO cobalt transport 100.0 4.2E-36 9.1E-41 344.5 23.9 219 694-933 21-261 (320)
158 COG1136 SalX ABC-type antimicr 100.0 1.1E-36 2.5E-41 321.2 17.4 180 1-224 33-220 (226)
159 PRK11300 livG leucine/isoleuci 100.0 2.2E-36 4.8E-41 339.7 20.8 217 695-933 6-239 (255)
160 KOG0058 Peptide exporter, ABC 100.0 9.7E-37 2.1E-41 359.5 18.5 219 692-933 463-687 (716)
161 PRK14247 phosphate ABC transpo 100.0 4E-36 8.6E-41 336.5 22.5 206 718-932 14-229 (250)
162 PRK13646 cbiO cobalt transport 100.0 2.4E-36 5.3E-41 343.4 20.9 217 695-932 3-230 (286)
163 PRK13650 cbiO cobalt transport 100.0 5.4E-36 1.2E-40 339.4 23.5 215 695-932 5-224 (279)
164 TIGR03415 ABC_choXWV_ATP choli 100.0 3.2E-36 7E-41 349.3 22.1 207 715-933 32-250 (382)
165 PRK13548 hmuV hemin importer A 100.0 3.1E-36 6.8E-41 337.8 21.3 204 718-933 13-226 (258)
166 PRK11614 livF leucine/isoleuci 100.0 2.3E-36 5.1E-41 335.5 20.0 212 695-933 6-222 (237)
167 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.7E-36 5.9E-41 328.9 20.1 194 725-930 16-211 (211)
168 TIGR03005 ectoine_ehuA ectoine 100.0 4E-36 8.6E-41 336.7 21.9 204 718-932 11-231 (252)
169 TIGR01978 sufC FeS assembly AT 100.0 3.9E-36 8.5E-41 335.5 21.7 210 717-932 10-229 (243)
170 PRK13636 cbiO cobalt transport 100.0 3.5E-36 7.5E-41 341.6 21.5 216 694-933 5-227 (283)
171 PRK14273 phosphate ABC transpo 100.0 9.6E-36 2.1E-40 334.0 24.7 215 694-932 7-233 (254)
172 TIGR03411 urea_trans_UrtD urea 100.0 4.2E-36 9.2E-41 334.7 21.5 206 718-933 13-227 (242)
173 PRK11231 fecE iron-dicitrate t 100.0 2.4E-36 5.2E-41 338.9 19.6 207 717-933 12-223 (255)
174 PRK14267 phosphate ABC transpo 100.0 4.9E-36 1.1E-40 336.3 22.0 216 695-932 5-232 (253)
175 PRK14268 phosphate ABC transpo 100.0 5.4E-36 1.2E-40 336.4 22.2 214 694-932 12-237 (258)
176 PRK13644 cbiO cobalt transport 100.0 5.7E-36 1.2E-40 338.2 21.9 202 719-933 14-220 (274)
177 TIGR03410 urea_trans_UrtE urea 100.0 3.8E-36 8.2E-41 332.4 20.0 202 717-933 10-217 (230)
178 PRK13638 cbiO cobalt transport 100.0 5.2E-36 1.1E-40 338.8 21.5 204 717-932 11-220 (271)
179 PRK09984 phosphonate/organopho 100.0 3.9E-36 8.4E-41 338.6 20.3 209 718-933 15-238 (262)
180 TIGR01184 ntrCD nitrate transp 100.0 6.2E-36 1.3E-40 329.7 21.1 198 723-932 1-199 (230)
181 cd03267 ABC_NatA_like Similar 100.0 8.4E-36 1.8E-40 330.0 22.2 203 716-930 30-236 (236)
182 PRK14241 phosphate transporter 100.0 8.2E-36 1.8E-40 335.1 22.4 216 695-932 5-237 (258)
183 PRK13635 cbiO cobalt transport 100.0 6.6E-36 1.4E-40 338.3 21.6 215 695-933 6-225 (279)
184 TIGR03608 L_ocin_972_ABC putat 100.0 7E-36 1.5E-40 324.7 20.8 193 716-920 7-206 (206)
185 PRK13652 cbiO cobalt transport 100.0 8.2E-36 1.8E-40 337.8 22.1 202 720-933 17-223 (277)
186 PRK10575 iron-hydroxamate tran 100.0 4.6E-36 9.9E-41 338.1 19.9 217 695-933 12-233 (265)
187 COG4175 ProV ABC-type proline/ 100.0 1.8E-36 3.9E-41 321.7 15.3 201 721-933 42-250 (386)
188 COG1245 Predicted ATPase, RNas 100.0 6E-35 1.3E-39 322.6 27.9 170 726-921 360-530 (591)
189 PRK13649 cbiO cobalt transport 100.0 8.6E-36 1.9E-40 339.0 21.9 200 720-932 20-229 (280)
190 cd03297 ABC_ModC_molybdenum_tr 100.0 8.8E-36 1.9E-40 325.5 21.0 200 714-930 7-214 (214)
191 TIGR02142 modC_ABC molybdenum 100.0 6.8E-36 1.5E-40 348.9 21.3 201 716-932 8-216 (354)
192 PRK10584 putative ABC transpor 100.0 1.4E-35 3E-40 327.5 22.4 212 695-928 7-226 (228)
193 PRK11022 dppD dipeptide transp 100.0 1.3E-35 2.8E-40 341.8 23.0 221 695-933 4-239 (326)
194 PRK10253 iron-enterobactin tra 100.0 5.7E-36 1.2E-40 337.3 19.6 218 694-933 7-229 (265)
195 TIGR03873 F420-0_ABC_ATP propo 100.0 6.7E-36 1.4E-40 335.5 20.0 207 718-933 12-222 (256)
196 COG4598 HisP ABC-type histidin 100.0 2.9E-36 6.4E-41 293.7 14.6 213 710-933 9-237 (256)
197 PRK11308 dppF dipeptide transp 100.0 1.2E-35 2.5E-40 341.9 22.2 226 694-933 5-240 (327)
198 TIGR02769 nickel_nikE nickel i 100.0 1.2E-35 2.6E-40 334.7 21.9 204 719-933 23-236 (265)
199 PRK13549 xylose transporter AT 100.0 6.9E-36 1.5E-40 367.9 21.6 212 717-935 15-230 (506)
200 PRK10744 pstB phosphate transp 100.0 2.5E-35 5.4E-40 331.4 24.3 216 693-932 12-239 (260)
201 PRK14269 phosphate ABC transpo 100.0 1.4E-35 2.9E-40 330.9 21.7 206 717-932 12-225 (246)
202 PRK14242 phosphate transporter 100.0 3.1E-35 6.8E-40 329.8 24.7 215 694-932 6-232 (253)
203 cd03300 ABC_PotA_N PotA is an 100.0 1.6E-35 3.5E-40 327.2 21.9 203 718-932 11-215 (232)
204 cd03233 ABC_PDR_domain1 The pl 100.0 2.2E-35 4.9E-40 318.2 22.3 196 694-930 3-202 (202)
205 COG1117 PstB ABC-type phosphat 100.0 5.5E-36 1.2E-40 302.0 16.2 206 1-254 35-248 (253)
206 PRK09473 oppD oligopeptide tra 100.0 3.2E-35 7E-40 338.7 25.0 225 694-933 12-247 (330)
207 PRK13639 cbiO cobalt transport 100.0 1.4E-35 3.1E-40 335.5 21.6 202 720-933 15-222 (275)
208 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-35 3.8E-40 322.7 21.5 198 722-931 13-212 (213)
209 PRK14245 phosphate ABC transpo 100.0 1.7E-35 3.7E-40 331.1 21.8 204 718-932 14-229 (250)
210 PRK14235 phosphate transporter 100.0 1.9E-35 4.1E-40 333.3 22.1 216 694-932 19-246 (267)
211 TIGR00968 3a0106s01 sulfate AB 100.0 1.8E-35 3.9E-40 327.8 21.5 203 718-932 11-215 (237)
212 PRK14256 phosphate ABC transpo 100.0 2.8E-35 6.1E-40 329.8 23.2 215 695-932 5-231 (252)
213 PRK11144 modC molybdate transp 100.0 1.2E-35 2.6E-40 346.2 21.0 191 725-933 16-214 (352)
214 PRK13547 hmuV hemin importer A 100.0 1.1E-35 2.3E-40 334.4 19.7 210 717-933 11-240 (272)
215 COG0444 DppD ABC-type dipeptid 100.0 3E-35 6.5E-40 320.2 22.4 209 719-933 17-239 (316)
216 PRK13632 cbiO cobalt transport 100.0 1.7E-35 3.7E-40 334.3 21.2 215 694-932 7-226 (271)
217 PRK15093 antimicrobial peptide 100.0 4.5E-35 9.8E-40 338.7 24.8 222 695-932 4-243 (330)
218 PRK14250 phosphate ABC transpo 100.0 1.2E-35 2.6E-40 330.1 19.1 208 695-932 4-216 (241)
219 cd03232 ABC_PDR_domain2 The pl 100.0 1.8E-35 4E-40 316.4 19.5 189 695-930 4-192 (192)
220 PRK13645 cbiO cobalt transport 100.0 2E-35 4.4E-40 337.0 21.2 219 694-932 6-235 (289)
221 cd03299 ABC_ModC_like Archeal 100.0 3E-35 6.4E-40 325.6 21.8 199 722-932 14-214 (235)
222 PRK14237 phosphate transporter 100.0 7.8E-35 1.7E-39 328.2 25.3 221 692-932 18-246 (267)
223 PRK14244 phosphate ABC transpo 100.0 3.3E-35 7.1E-40 329.1 21.8 209 718-932 16-232 (251)
224 COG4161 ArtP ABC-type arginine 100.0 1.8E-35 3.8E-40 283.0 16.6 212 711-933 6-226 (242)
225 PRK10771 thiQ thiamine transpo 100.0 2.3E-35 5E-40 326.2 20.2 196 725-932 17-214 (232)
226 PRK13633 cobalt transporter AT 100.0 2.5E-35 5.4E-40 334.4 20.9 219 695-933 5-229 (280)
227 COG4988 CydD ABC-type transpor 100.0 2.1E-35 4.6E-40 342.4 20.3 214 691-933 317-539 (559)
228 PRK14270 phosphate ABC transpo 100.0 3.9E-35 8.5E-40 328.4 21.8 215 694-932 4-230 (251)
229 PRK15112 antimicrobial peptide 100.0 3E-35 6.4E-40 331.7 20.9 223 695-932 5-234 (267)
230 PRK14274 phosphate ABC transpo 100.0 3.9E-35 8.5E-40 329.8 21.9 214 695-932 13-238 (259)
231 PRK00349 uvrA excinuclease ABC 100.0 5.6E-34 1.2E-38 360.9 34.6 123 794-932 791-922 (943)
232 PRK14259 phosphate ABC transpo 100.0 3.1E-35 6.8E-40 331.6 20.5 214 694-932 13-248 (269)
233 PRK13648 cbiO cobalt transport 100.0 4.3E-35 9.4E-40 330.9 21.6 216 694-933 7-227 (269)
234 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.5E-35 1.2E-39 320.5 21.8 200 710-930 25-224 (224)
235 PRK13640 cbiO cobalt transport 100.0 4.2E-35 9E-40 332.6 21.5 216 695-932 6-227 (282)
236 PRK14239 phosphate transporter 100.0 5.1E-35 1.1E-39 328.1 21.9 214 695-932 6-231 (252)
237 PRK14240 phosphate transporter 100.0 5.7E-35 1.2E-39 327.1 22.2 214 695-932 4-229 (250)
238 PRK10762 D-ribose transporter 100.0 2.6E-35 5.6E-40 362.3 21.3 210 717-935 14-228 (501)
239 TIGR02770 nickel_nikD nickel i 100.0 5E-35 1.1E-39 322.9 21.4 201 722-932 1-210 (230)
240 COG1137 YhbG ABC-type (unclass 100.0 2.9E-36 6.4E-41 300.4 9.9 193 1-235 32-228 (243)
241 cd03213 ABCG_EPDR ABCG transpo 100.0 5.6E-35 1.2E-39 313.0 20.3 190 694-930 3-194 (194)
242 COG2274 SunT ABC-type bacterio 100.0 9.9E-36 2.1E-40 367.5 16.2 215 691-933 468-692 (709)
243 PRK14253 phosphate ABC transpo 100.0 7.4E-35 1.6E-39 326.0 21.7 204 718-932 14-228 (249)
244 PRK14272 phosphate ABC transpo 100.0 8.9E-35 1.9E-39 326.1 22.4 205 718-932 15-231 (252)
245 PRK14260 phosphate ABC transpo 100.0 7.6E-35 1.7E-39 327.3 21.9 215 695-932 8-238 (259)
246 PRK09700 D-allose transporter 100.0 3.5E-35 7.6E-40 362.3 20.9 209 717-934 15-231 (510)
247 PRK14262 phosphate ABC transpo 100.0 8.1E-35 1.8E-39 325.9 21.8 203 719-932 15-229 (250)
248 PRK00635 excinuclease ABC subu 100.0 1.1E-33 2.3E-38 370.8 35.4 135 791-933 759-902 (1809)
249 PRK11701 phnK phosphonate C-P 100.0 8.1E-35 1.8E-39 327.1 21.4 214 695-932 7-236 (258)
250 TIGR01166 cbiO cobalt transpor 100.0 9.7E-35 2.1E-39 311.0 20.9 180 718-907 3-188 (190)
251 TIGR02982 heterocyst_DevA ABC 100.0 1E-34 2.2E-39 318.3 21.4 195 720-926 18-219 (220)
252 PRK13642 cbiO cobalt transport 100.0 1.9E-34 4.1E-39 326.7 24.0 215 695-932 5-224 (277)
253 PRK13543 cytochrome c biogenes 100.0 7.8E-35 1.7E-39 317.5 20.1 201 694-921 11-211 (214)
254 KOG0057 Mitochondrial Fe/S clu 100.0 3.4E-35 7.3E-40 334.1 17.8 211 693-933 350-570 (591)
255 PRK14254 phosphate ABC transpo 100.0 3.4E-34 7.4E-39 325.1 25.9 214 694-932 39-264 (285)
256 PRK13538 cytochrome c biogenes 100.0 5.5E-35 1.2E-39 316.4 18.4 177 718-907 12-190 (204)
257 PRK14257 phosphate ABC transpo 100.0 2.5E-34 5.4E-39 330.8 24.7 221 694-933 80-309 (329)
258 PRK14271 phosphate ABC transpo 100.0 1.4E-34 2.9E-39 327.1 22.1 219 694-932 21-246 (276)
259 cd03231 ABC_CcmA_heme_exporter 100.0 6.7E-35 1.5E-39 314.7 18.7 187 717-920 10-198 (201)
260 PRK14236 phosphate transporter 100.0 3.4E-34 7.4E-39 323.9 25.2 215 694-932 25-251 (272)
261 PRK14275 phosphate ABC transpo 100.0 1.4E-34 3E-39 328.8 21.8 215 694-932 39-265 (286)
262 PRK14261 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 324.2 21.7 214 695-932 7-232 (253)
263 TIGR02633 xylG D-xylose ABC tr 100.0 9.6E-35 2.1E-39 357.9 22.2 211 717-934 11-227 (500)
264 PRK14251 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 323.8 21.8 214 695-932 5-230 (251)
265 PRK10982 galactose/methyl gala 100.0 7.9E-35 1.7E-39 357.5 21.3 211 715-934 6-220 (491)
266 COG1129 MglA ABC-type sugar tr 100.0 1.1E-34 2.5E-39 336.5 21.3 224 711-943 12-242 (500)
267 PRK14249 phosphate ABC transpo 100.0 1.7E-34 3.6E-39 323.4 21.9 204 718-932 15-230 (251)
268 PRK14248 phosphate ABC transpo 100.0 1.4E-34 3E-39 326.9 21.2 214 695-932 22-247 (268)
269 PRK15056 manganese/iron transp 100.0 1.7E-34 3.7E-39 326.4 21.9 218 694-933 6-226 (272)
270 COG4148 ModC ABC-type molybdat 100.0 2.2E-35 4.7E-40 308.0 13.3 186 1-235 26-218 (352)
271 PRK11650 ugpC glycerol-3-phosp 100.0 7.4E-35 1.6E-39 338.4 19.2 191 1-234 32-223 (356)
272 PRK15439 autoinducer 2 ABC tra 100.0 8.6E-35 1.9E-39 357.8 20.7 211 695-934 12-226 (510)
273 PRK14258 phosphate ABC transpo 100.0 2E-34 4.3E-39 324.1 21.9 221 694-932 7-240 (261)
274 PRK14263 phosphate ABC transpo 100.0 2E-34 4.4E-39 323.2 21.9 208 717-932 18-240 (261)
275 PRK10418 nikD nickel transport 100.0 3.9E-34 8.4E-39 320.6 24.1 213 694-932 4-225 (254)
276 KOG0055 Multidrug/pheromone ex 100.0 4.6E-34 9.9E-39 355.4 26.9 216 691-933 347-572 (1228)
277 PRK11432 fbpC ferric transport 100.0 8.4E-35 1.8E-39 336.8 19.0 191 1-234 34-225 (351)
278 PRK10419 nikE nickel transport 100.0 1.7E-34 3.7E-39 325.4 21.0 203 720-933 25-237 (268)
279 COG1124 DppF ABC-type dipeptid 100.0 9.3E-35 2E-39 302.0 16.9 189 2-235 36-231 (252)
280 PRK10247 putative ABC transpor 100.0 1.2E-34 2.5E-39 318.7 18.6 209 695-931 8-221 (225)
281 TIGR02314 ABC_MetN D-methionin 100.0 1.1E-34 2.4E-39 333.8 19.1 191 1-234 33-229 (343)
282 PRK14255 phosphate ABC transpo 100.0 3.1E-34 6.7E-39 321.6 22.3 214 695-932 6-231 (252)
283 COG1122 CbiO ABC-type cobalt t 100.0 9E-35 2E-39 314.2 17.3 191 2-235 33-228 (235)
284 PRK14246 phosphate ABC transpo 100.0 3.6E-34 7.8E-39 320.4 22.5 207 716-932 19-236 (257)
285 CHL00131 ycf16 sulfate ABC tra 100.0 3.2E-34 6.8E-39 321.7 22.0 220 695-933 8-237 (252)
286 PRK14238 phosphate transporter 100.0 2.7E-34 5.8E-39 324.3 21.4 215 694-932 24-250 (271)
287 PRK03695 vitamin B12-transport 100.0 2.9E-34 6.2E-39 320.0 21.3 198 722-933 11-218 (248)
288 PRK11288 araG L-arabinose tran 100.0 1.6E-34 3.4E-39 355.5 21.1 216 695-932 5-224 (501)
289 TIGR03265 PhnT2 putative 2-ami 100.0 1.3E-34 2.8E-39 335.9 19.3 192 1-235 32-224 (353)
290 TIGR01186 proV glycine betaine 100.0 1.4E-34 3.1E-39 334.4 19.3 192 1-235 21-219 (363)
291 cd03252 ABCC_Hemolysin The ABC 100.0 1.3E-34 2.8E-39 321.7 17.9 196 720-932 15-220 (237)
292 PRK13539 cytochrome c biogenes 100.0 1.8E-34 3.8E-39 312.9 18.4 187 717-920 12-198 (207)
293 PRK14265 phosphate ABC transpo 100.0 3.3E-34 7.1E-39 323.9 21.1 214 694-932 20-253 (274)
294 COG0411 LivG ABC-type branched 100.0 4.7E-35 1E-39 304.7 12.8 204 1-235 32-239 (250)
295 cd03230 ABC_DR_subfamily_A Thi 100.0 1.6E-34 3.4E-39 304.0 17.0 159 719-925 12-172 (173)
296 TIGR02323 CP_lyasePhnK phospho 100.0 3.9E-34 8.4E-39 321.0 21.1 204 718-932 14-233 (253)
297 PRK14243 phosphate transporter 100.0 3.5E-34 7.5E-39 322.4 20.7 213 695-932 11-243 (264)
298 PRK13537 nodulation ABC transp 100.0 2E-34 4.3E-39 329.7 18.6 191 1-235 35-227 (306)
299 COG4987 CydC ABC-type transpor 100.0 1.2E-34 2.6E-39 329.6 16.2 212 694-933 336-557 (573)
300 TIGR03258 PhnT 2-aminoethylpho 100.0 2.4E-34 5.1E-39 334.0 19.1 192 1-235 33-228 (362)
301 PRK13546 teichoic acids export 100.0 1.3E-33 2.8E-38 315.7 24.1 194 718-933 35-228 (264)
302 PRK09452 potA putrescine/sperm 100.0 2.3E-34 5E-39 335.1 18.8 191 1-234 42-233 (375)
303 PRK11174 cysteine/glutathione 100.0 2.9E-34 6.4E-39 361.3 21.2 210 694-933 349-568 (588)
304 TIGR00630 uvra excinuclease AB 100.0 1.2E-32 2.6E-37 348.2 35.6 123 794-932 789-920 (924)
305 PRK14264 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 327.0 21.0 221 694-932 45-284 (305)
306 COG0410 LivF ABC-type branched 100.0 3.4E-34 7.4E-39 295.9 17.5 191 1-235 31-226 (237)
307 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-34 2.5E-39 321.6 15.1 195 721-932 16-220 (234)
308 COG4148 ModC ABC-type molybdat 100.0 7E-35 1.5E-39 304.2 12.4 190 725-932 16-213 (352)
309 PRK13545 tagH teichoic acids e 100.0 9.7E-34 2.1E-38 332.2 23.3 192 720-933 37-228 (549)
310 COG1123 ATPase components of v 100.0 1.1E-33 2.4E-38 330.3 23.6 224 694-933 5-240 (539)
311 TIGR01189 ccmA heme ABC export 100.0 5.6E-34 1.2E-38 307.1 19.7 177 717-907 10-188 (198)
312 cd03245 ABCC_bacteriocin_expor 100.0 2.9E-34 6.2E-39 315.2 17.7 195 720-930 17-220 (220)
313 PRK14266 phosphate ABC transpo 100.0 6.9E-34 1.5E-38 318.4 21.1 208 718-932 14-229 (250)
314 PRK09580 sufC cysteine desulfu 100.0 7.6E-34 1.7E-38 317.9 21.3 209 718-932 12-230 (248)
315 COG0396 sufC Cysteine desulfur 100.0 3.1E-33 6.6E-38 286.8 23.7 228 695-946 4-238 (251)
316 PRK13540 cytochrome c biogenes 100.0 6.3E-34 1.4E-38 307.0 19.4 184 718-918 12-197 (200)
317 COG4175 ProV ABC-type proline/ 100.0 1.4E-34 3E-39 307.4 13.3 192 1-235 56-254 (386)
318 TIGR02324 CP_lyasePhnL phospho 100.0 9.1E-34 2E-38 312.0 20.2 191 720-921 21-223 (224)
319 cd03229 ABC_Class3 This class 100.0 3.2E-34 6.9E-39 303.1 15.8 160 718-922 11-176 (178)
320 COG2884 FtsE Predicted ATPase 100.0 5.3E-34 1.1E-38 282.5 16.1 185 1-229 30-220 (223)
321 PRK14252 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 318.3 21.7 215 694-932 16-244 (265)
322 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.4E-34 5.2E-39 319.7 15.4 196 720-932 16-221 (238)
323 COG3845 ABC-type uncharacteriz 100.0 1.2E-33 2.5E-38 319.8 20.8 247 712-967 9-262 (501)
324 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.1E-33 2.3E-38 317.2 20.3 210 695-933 3-221 (275)
325 TIGR01188 drrA daunorubicin re 100.0 5.4E-34 1.2E-38 326.8 18.3 192 1-236 21-214 (302)
326 cd03261 ABC_Org_Solvent_Resist 100.0 6.9E-34 1.5E-38 315.3 18.5 192 1-234 28-225 (235)
327 KOG0062 ATPase component of AB 100.0 1.6E-33 3.6E-38 317.0 21.4 180 721-927 378-558 (582)
328 TIGR03269 met_CoM_red_A2 methy 100.0 1.2E-33 2.7E-38 349.4 22.3 206 717-932 10-253 (520)
329 cd03254 ABCC_Glucan_exporter_l 100.0 7.1E-34 1.5E-38 314.2 17.8 197 720-932 16-221 (229)
330 TIGR03771 anch_rpt_ABC anchore 100.0 1.5E-33 3.3E-38 309.1 20.3 194 728-933 1-197 (223)
331 PRK11607 potG putrescine trans 100.0 9.8E-34 2.1E-38 330.6 19.6 191 1-234 47-238 (377)
332 PRK10851 sulfate/thiosulfate t 100.0 1.2E-33 2.5E-38 328.0 19.9 195 1-234 30-225 (353)
333 PRK09544 znuC high-affinity zi 100.0 1.2E-33 2.6E-38 314.5 18.8 197 695-932 5-204 (251)
334 COG4619 ABC-type uncharacteriz 100.0 2E-34 4.2E-39 278.5 10.7 200 712-926 8-212 (223)
335 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-33 2.3E-38 361.5 21.0 209 694-933 451-669 (686)
336 PRK15134 microcin C ABC transp 100.0 1.9E-33 4.2E-38 348.1 22.3 204 720-932 22-241 (529)
337 cd03215 ABC_Carb_Monos_II This 100.0 9.7E-34 2.1E-38 300.6 16.8 160 722-925 15-181 (182)
338 PRK10261 glutathione transport 100.0 2.5E-33 5.4E-38 351.5 23.3 219 695-933 13-254 (623)
339 PRK13536 nodulation factor exp 100.0 1.5E-33 3.2E-38 325.4 19.5 191 1-235 69-261 (340)
340 PRK11000 maltose/maltodextrin 100.0 1.3E-33 2.9E-38 330.4 19.3 191 1-234 31-222 (369)
341 PRK11176 lipid transporter ATP 100.0 1.1E-33 2.4E-38 355.9 20.0 212 694-932 341-562 (582)
342 COG1132 MdlB ABC-type multidru 100.0 7.3E-34 1.6E-38 355.5 17.3 211 694-933 328-548 (567)
343 PRK11160 cysteine/glutathione 100.0 1.2E-33 2.5E-38 352.8 18.7 211 694-932 338-557 (574)
344 cd03253 ABCC_ATM1_transporter 100.0 9E-34 2E-38 314.8 15.8 196 720-932 14-219 (236)
345 cd03244 ABCC_MRP_domain2 Domai 100.0 2.6E-33 5.5E-38 307.9 19.1 209 695-931 3-220 (221)
346 COG4674 Uncharacterized ABC-ty 100.0 2E-34 4.4E-39 285.6 9.2 211 712-933 10-231 (249)
347 PRK10790 putative multidrug tr 100.0 2E-33 4.4E-38 353.6 20.8 210 694-933 340-559 (592)
348 cd03217 ABC_FeS_Assembly ABC-t 100.0 2.2E-33 4.8E-38 302.4 17.9 174 718-932 11-189 (200)
349 cd03246 ABCC_Protease_Secretio 100.0 1.9E-33 4.1E-38 295.7 16.6 155 720-925 15-172 (173)
350 COG1119 ModF ABC-type molybden 100.0 5.7E-34 1.2E-38 296.2 12.2 215 694-931 31-256 (257)
351 cd03265 ABC_DrrA DrrA is the A 100.0 2.5E-33 5.4E-38 307.5 18.0 190 1-233 28-219 (220)
352 PRK11153 metN DL-methionine tr 100.0 2.7E-33 5.9E-38 325.2 19.3 191 1-234 33-229 (343)
353 cd03247 ABCC_cytochrome_bd The 100.0 2.2E-33 4.8E-38 296.9 16.7 161 721-930 16-178 (178)
354 COG4618 ArpD ABC-type protease 100.0 1.1E-33 2.3E-38 318.4 15.0 224 685-933 325-556 (580)
355 cd03248 ABCC_TAP TAP, the Tran 100.0 6.6E-34 1.4E-38 313.6 13.0 206 695-925 12-225 (226)
356 cd03259 ABC_Carb_Solutes_like 100.0 3E-33 6.6E-38 305.4 17.6 185 1-228 28-213 (213)
357 COG4525 TauB ABC-type taurine 100.0 6.3E-33 1.4E-37 274.7 18.0 190 1-235 33-224 (259)
358 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.6E-33 9.9E-38 357.5 21.8 209 694-932 477-695 (710)
359 cd03214 ABC_Iron-Siderophores_ 100.0 1.5E-33 3.2E-38 298.7 14.3 167 718-930 10-180 (180)
360 COG2274 SunT ABC-type bacterio 100.0 1.4E-33 3E-38 348.5 15.9 194 1-236 501-697 (709)
361 PRK10070 glycine betaine trans 100.0 4.3E-33 9.4E-38 325.7 19.1 191 1-234 56-253 (400)
362 TIGR01193 bacteriocin_ABC ABC- 100.0 4.2E-33 9.2E-38 357.3 20.3 210 694-932 473-692 (708)
363 KOG0066 eIF2-interacting prote 100.0 3.6E-32 7.7E-37 296.6 24.0 179 718-924 598-778 (807)
364 TIGR00958 3a01208 Conjugate Tr 100.0 6.6E-33 1.4E-37 353.7 21.6 210 694-932 478-697 (711)
365 cd03296 ABC_CysA_sulfate_impor 100.0 6.3E-33 1.4E-37 308.2 18.7 195 1-234 30-225 (239)
366 PRK10938 putative molybdenum t 100.0 3.2E-33 7E-38 343.5 18.0 197 717-933 13-220 (490)
367 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.2E-33 1.6E-37 312.4 19.3 191 1-234 52-249 (269)
368 TIGR03375 type_I_sec_LssB type 100.0 1.1E-32 2.3E-37 352.8 22.6 211 694-932 463-683 (694)
369 COG4988 CydD ABC-type transpor 100.0 4.3E-33 9.4E-38 323.3 16.9 192 1-235 349-543 (559)
370 PRK13637 cbiO cobalt transport 100.0 1E-32 2.2E-37 313.6 19.7 192 1-235 35-234 (287)
371 TIGR01288 nodI ATP-binding ABC 100.0 8.7E-33 1.9E-37 317.0 19.2 191 1-235 32-224 (303)
372 cd03219 ABC_Mj1267_LivG_branch 100.0 8.1E-33 1.8E-37 307.2 18.4 200 1-234 28-231 (236)
373 PRK13541 cytochrome c biogenes 100.0 1.2E-32 2.7E-37 295.8 19.1 178 720-916 14-191 (195)
374 PRK11144 modC molybdate transp 100.0 8.2E-33 1.8E-37 322.4 19.1 186 1-235 26-218 (352)
375 cd03293 ABC_NrtD_SsuB_transpor 100.0 9.9E-33 2.1E-37 302.8 18.5 185 1-230 32-218 (220)
376 KOG0058 Peptide exporter, ABC 100.0 2.1E-33 4.6E-38 331.3 14.0 193 1-235 496-691 (716)
377 TIGR01842 type_I_sec_PrtD type 100.0 8.5E-33 1.8E-37 343.9 19.8 212 694-932 316-537 (544)
378 cd03258 ABC_MetN_methionine_tr 100.0 9.8E-33 2.1E-37 305.8 18.2 191 1-234 33-229 (233)
379 COG4586 ABC-type uncharacteriz 100.0 6E-33 1.3E-37 289.7 15.1 202 720-933 37-242 (325)
380 TIGR03522 GldA_ABC_ATP gliding 100.0 1E-32 2.3E-37 315.7 18.6 190 1-235 30-221 (301)
381 TIGR02142 modC_ABC molybdenum 100.0 1.3E-32 2.8E-37 321.3 19.1 190 1-235 25-221 (354)
382 cd03256 ABC_PhnC_transporter A 100.0 1.6E-32 3.4E-37 306.1 18.8 199 1-234 29-233 (241)
383 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.3E-32 2.8E-37 298.8 17.7 198 694-931 6-206 (207)
384 KOG0059 Lipid exporter ABCA1 a 100.0 9.6E-31 2.1E-35 337.4 38.0 216 713-944 570-790 (885)
385 TIGR03415 ABC_choXWV_ATP choli 100.0 1.4E-32 3.1E-37 318.9 19.0 191 1-234 52-253 (382)
386 cd03218 ABC_YhbG The ABC trans 100.0 1.7E-32 3.7E-37 303.8 18.6 189 1-233 28-220 (232)
387 cd03288 ABCC_SUR2 The SUR doma 100.0 3.8E-33 8.2E-38 313.0 13.5 210 694-932 19-238 (257)
388 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-32 3.7E-37 299.6 18.2 185 1-228 28-213 (213)
389 cd03223 ABCD_peroxisomal_ALDP 100.0 2.9E-32 6.2E-37 284.2 19.0 152 720-925 14-165 (166)
390 TIGR00960 3a0501s02 Type II (G 100.0 9.2E-33 2E-37 302.3 16.0 180 1-224 31-216 (216)
391 TIGR01187 potA spermidine/putr 100.0 2.1E-32 4.5E-37 315.8 19.5 184 738-933 1-186 (325)
392 TIGR01187 potA spermidine/putr 100.0 1.5E-32 3.4E-37 316.9 18.3 188 4-234 1-189 (325)
393 PRK09536 btuD corrinoid ABC tr 100.0 1E-32 2.2E-37 322.8 17.0 194 1-234 31-227 (402)
394 cd03269 ABC_putative_ATPase Th 100.0 1.5E-32 3.3E-37 299.2 17.1 183 1-228 28-210 (210)
395 cd03216 ABC_Carb_Monos_I This 100.0 1.7E-32 3.7E-37 285.0 16.6 148 718-928 11-162 (163)
396 cd03268 ABC_BcrA_bacitracin_re 100.0 2E-32 4.4E-37 297.7 17.5 180 1-228 28-208 (208)
397 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.4E-32 5.3E-37 304.1 18.5 191 1-234 29-224 (242)
398 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.4E-32 3.1E-37 301.4 16.2 180 1-224 32-218 (218)
399 PRK13657 cyclic beta-1,2-gluca 100.0 5.1E-32 1.1E-36 340.4 23.3 210 694-932 334-553 (588)
400 cd03250 ABCC_MRP_domain1 Domai 100.0 1.7E-32 3.7E-37 297.2 16.5 177 721-924 19-203 (204)
401 PRK11831 putative ABC transpor 100.0 2.5E-32 5.4E-37 308.3 18.5 192 1-234 35-232 (269)
402 PRK13634 cbiO cobalt transport 100.0 2.8E-32 6.1E-37 310.5 19.0 190 1-234 35-234 (290)
403 PRK13643 cbiO cobalt transport 100.0 2.1E-32 4.5E-37 311.2 17.9 202 1-247 34-248 (288)
404 TIGR02315 ABC_phnC phosphonate 100.0 1.8E-32 4E-37 305.8 17.0 198 1-233 30-233 (243)
405 cd03224 ABC_TM1139_LivF_branch 100.0 2.5E-32 5.4E-37 300.4 17.8 188 1-234 28-220 (222)
406 COG4559 ABC-type hemin transpo 100.0 1.6E-32 3.4E-37 276.3 14.6 193 1-235 29-230 (259)
407 PRK11629 lolD lipoprotein tran 100.0 3.4E-32 7.5E-37 301.1 18.8 186 1-230 37-229 (233)
408 TIGR01846 type_I_sec_HlyB type 100.0 3.5E-32 7.5E-37 347.8 21.6 211 694-932 455-675 (694)
409 cd03228 ABCC_MRP_Like The MRP 100.0 1.8E-32 3.9E-37 287.8 15.7 151 721-922 16-169 (171)
410 cd03237 ABC_RNaseL_inhibitor_d 100.0 6.8E-32 1.5E-36 298.9 21.1 200 722-946 9-216 (246)
411 cd03226 ABC_cobalt_CbiO_domain 100.0 2E-32 4.3E-37 296.9 16.4 177 1-225 28-205 (205)
412 TIGR02203 MsbA_lipidA lipid A 100.0 2.8E-32 6.1E-37 342.9 20.2 212 694-932 330-551 (571)
413 PRK15079 oligopeptide ABC tran 100.0 3.1E-32 6.8E-37 313.6 18.7 193 1-234 49-250 (331)
414 cd03290 ABCC_SUR1_N The SUR do 100.0 4.8E-32 1E-36 296.9 18.9 187 720-922 14-216 (218)
415 cd03264 ABC_drug_resistance_li 100.0 3.1E-32 6.8E-37 296.9 17.1 183 1-228 27-211 (211)
416 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.2E-32 7E-37 296.8 17.1 185 1-228 26-211 (211)
417 TIGR02868 CydC thiol reductant 100.0 3.6E-32 7.9E-37 337.9 20.0 187 694-906 334-529 (529)
418 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.3E-32 1.1E-36 300.2 19.1 191 1-235 29-221 (236)
419 cd03266 ABC_NatA_sodium_export 100.0 2.6E-32 5.5E-37 299.4 16.3 184 1-228 33-218 (218)
420 TIGR01184 ntrCD nitrate transp 100.0 3.2E-32 6.9E-37 300.2 17.2 190 1-233 13-202 (230)
421 cd03263 ABC_subfamily_A The AB 100.0 3E-32 6.5E-37 299.2 16.8 188 1-233 30-219 (220)
422 KOG0056 Heavy metal exporter H 100.0 7.5E-33 1.6E-37 306.2 12.0 217 691-932 534-756 (790)
423 cd03234 ABCG_White The White s 100.0 6.3E-32 1.4E-36 297.5 19.3 188 1-228 35-226 (226)
424 cd03260 ABC_PstB_phosphate_tra 100.0 2.6E-32 5.7E-37 301.1 16.2 189 1-232 28-226 (227)
425 PRK13650 cbiO cobalt transport 100.0 5.3E-32 1.1E-36 306.8 18.9 190 1-234 35-228 (279)
426 PRK13647 cbiO cobalt transport 100.0 5.3E-32 1.1E-36 305.9 18.7 189 1-233 33-225 (274)
427 PRK10789 putative multidrug tr 100.0 7.5E-32 1.6E-36 336.5 21.6 211 694-932 313-533 (569)
428 cd03297 ABC_ModC_molybdenum_tr 100.0 5.8E-32 1.3E-36 295.3 17.8 183 1-228 25-214 (214)
429 PRK09493 glnQ glutamine ABC tr 100.0 5.5E-32 1.2E-36 301.1 17.6 190 1-234 29-224 (240)
430 KOG0057 Mitochondrial Fe/S clu 100.0 1.6E-32 3.6E-37 312.3 13.5 191 2-235 381-574 (591)
431 PRK11264 putative amino-acid A 100.0 6.6E-32 1.4E-36 302.5 18.0 191 1-234 31-232 (250)
432 PRK13646 cbiO cobalt transport 100.0 4.9E-32 1.1E-36 308.2 17.2 191 1-235 35-235 (286)
433 PRK13651 cobalt transporter AT 100.0 3.9E-32 8.5E-37 310.0 16.4 190 1-234 35-253 (305)
434 PRK11247 ssuB aliphatic sulfon 100.0 6.4E-32 1.4E-36 301.2 17.6 180 1-231 40-219 (257)
435 PRK13631 cbiO cobalt transport 100.0 7.3E-32 1.6E-36 309.5 18.4 189 1-234 54-264 (320)
436 PRK10771 thiQ thiamine transpo 100.0 8.6E-32 1.9E-36 297.7 18.2 191 1-234 27-218 (232)
437 COG0444 DppD ABC-type dipeptid 100.0 1.2E-31 2.6E-36 292.1 18.8 215 1-258 33-258 (316)
438 TIGR01192 chvA glucan exporter 100.0 4.2E-32 9.1E-37 339.2 17.3 210 694-932 334-553 (585)
439 TIGR02770 nickel_nikD nickel i 100.0 9.8E-32 2.1E-36 296.7 18.2 191 1-234 14-214 (230)
440 COG4604 CeuD ABC-type enteroch 100.0 1.2E-32 2.6E-37 273.5 9.5 194 1-235 29-225 (252)
441 TIGR02211 LolD_lipo_ex lipopro 100.0 7.1E-32 1.5E-36 296.5 16.8 181 1-225 33-220 (221)
442 cd03257 ABC_NikE_OppD_transpor 100.0 1.2E-31 2.6E-36 296.4 18.6 187 1-228 33-228 (228)
443 cd03291 ABCC_CFTR1 The CFTR su 100.0 4.3E-31 9.4E-36 297.3 23.2 198 692-932 37-242 (282)
444 PRK11248 tauB taurine transpor 100.0 1.2E-31 2.6E-36 299.7 18.5 186 1-231 29-216 (255)
445 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-31 2.3E-36 296.9 17.6 187 1-233 28-219 (230)
446 TIGR02204 MsbA_rel ABC transpo 100.0 1.7E-31 3.7E-36 335.9 21.7 212 694-932 337-558 (576)
447 PRK10535 macrolide transporter 100.0 5.5E-31 1.2E-35 331.4 26.1 218 695-934 5-229 (648)
448 PRK15177 Vi polysaccharide exp 100.0 2.3E-31 4.9E-36 289.2 19.6 186 722-933 2-188 (213)
449 PRK09473 oppD oligopeptide tra 100.0 1.3E-31 2.8E-36 308.9 18.6 199 1-235 44-251 (330)
450 PRK10895 lipopolysaccharide AB 100.0 1.1E-31 2.4E-36 298.8 17.5 191 1-234 31-225 (241)
451 PRK13635 cbiO cobalt transport 100.0 1E-31 2.2E-36 304.2 17.5 190 1-234 35-228 (279)
452 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-31 3.6E-36 291.4 18.5 186 1-229 26-212 (213)
453 PRK13636 cbiO cobalt transport 100.0 9.3E-32 2E-36 305.4 17.0 192 1-235 34-231 (283)
454 TIGR02857 CydD thiol reductant 100.0 1.6E-31 3.5E-36 332.2 20.8 200 694-920 320-529 (529)
455 COG4181 Predicted ABC-type tra 100.0 1.2E-31 2.6E-36 260.1 15.1 181 2-226 39-226 (228)
456 PRK11308 dppF dipeptide transp 100.0 1.6E-31 3.4E-36 307.7 18.8 193 1-235 43-244 (327)
457 COG4152 ABC-type uncharacteriz 100.0 7.3E-32 1.6E-36 277.0 14.0 193 1-238 30-222 (300)
458 PRK13641 cbiO cobalt transport 100.0 1.2E-31 2.6E-36 305.1 17.4 190 1-234 35-233 (287)
459 PRK11174 cysteine/glutathione 100.0 6E-32 1.3E-36 340.3 16.1 192 1-235 378-572 (588)
460 cd03292 ABC_FtsE_transporter F 100.0 1.2E-31 2.7E-36 293.2 16.5 180 1-224 29-214 (214)
461 PRK13652 cbiO cobalt transport 100.0 1.6E-31 3.5E-36 302.7 18.0 191 1-234 32-226 (277)
462 PRK11300 livG leucine/isoleuci 100.0 1.8E-31 3.8E-36 300.0 18.0 206 1-234 33-242 (255)
463 PRK13548 hmuV hemin importer A 100.0 2E-31 4.3E-36 299.0 18.3 191 1-234 30-229 (258)
464 TIGR02769 nickel_nikE nickel i 100.0 2.2E-31 4.9E-36 300.0 18.6 192 1-234 39-239 (265)
465 TIGR03005 ectoine_ehuA ectoine 100.0 2.1E-31 4.5E-36 298.6 18.1 191 1-234 28-235 (252)
466 TIGR02673 FtsE cell division A 100.0 1.6E-31 3.5E-36 292.1 16.8 179 1-223 30-214 (214)
467 PRK10619 histidine/lysine/argi 100.0 2.2E-31 4.8E-36 299.0 18.2 190 1-234 33-240 (257)
468 PRK11614 livF leucine/isoleuci 100.0 1.7E-31 3.6E-36 296.6 17.0 188 1-234 33-225 (237)
469 COG4598 HisP ABC-type histidin 100.0 7.7E-32 1.7E-36 262.9 12.3 191 1-234 34-240 (256)
470 PRK13648 cbiO cobalt transport 100.0 3.5E-31 7.6E-36 299.1 19.6 190 1-234 37-230 (269)
471 PRK14250 phosphate ABC transpo 100.0 2.4E-31 5.2E-36 295.6 17.6 186 1-234 31-220 (241)
472 TIGR03740 galliderm_ABC gallid 100.0 3.8E-31 8.2E-36 290.9 18.9 183 1-232 28-210 (223)
473 PRK10584 putative ABC transpor 100.0 2.8E-31 6E-36 293.2 17.7 182 1-226 38-226 (228)
474 PRK13632 cbiO cobalt transport 100.0 2.5E-31 5.4E-36 300.4 17.7 190 1-234 37-230 (271)
475 cd03299 ABC_ModC_like Archeal 100.0 3.9E-31 8.4E-36 292.8 18.7 191 1-234 27-218 (235)
476 TIGR00972 3a0107s01c2 phosphat 100.0 4E-31 8.8E-36 295.3 18.7 192 1-234 29-231 (247)
477 TIGR03411 urea_trans_UrtD urea 100.0 3.7E-31 8.1E-36 294.9 18.4 196 1-233 30-229 (242)
478 PRK15064 ABC transporter ATP-b 100.0 2.9E-31 6.3E-36 328.8 19.4 196 717-932 11-237 (530)
479 PRK11022 dppD dipeptide transp 100.0 3.2E-31 6.9E-36 305.4 18.3 196 1-235 35-243 (326)
480 cd03233 ABC_PDR_domain1 The pl 100.0 3.7E-31 8.1E-36 285.4 17.5 166 1-228 35-202 (202)
481 PRK13644 cbiO cobalt transport 100.0 2.9E-31 6.3E-36 299.9 17.3 189 1-234 30-223 (274)
482 PRK09984 phosphonate/organopho 100.0 3E-31 6.5E-36 298.9 17.3 201 1-233 32-240 (262)
483 cd03267 ABC_NatA_like Similar 100.0 4.2E-31 9E-36 292.5 18.0 185 1-228 49-236 (236)
484 PRK13638 cbiO cobalt transport 100.0 4.1E-31 8.8E-36 298.9 18.3 190 1-234 29-224 (271)
485 PRK10908 cell division protein 100.0 3.6E-31 7.8E-36 290.8 17.2 181 1-225 30-216 (222)
486 PRK11819 putative ABC transpor 100.0 4.5E-31 9.7E-36 328.0 20.2 193 719-932 19-245 (556)
487 cd03225 ABC_cobalt_CbiO_domain 100.0 2.5E-31 5.3E-36 290.0 15.7 179 1-223 29-211 (211)
488 PRK13640 cbiO cobalt transport 100.0 3.2E-31 7E-36 300.8 17.2 194 1-235 35-232 (282)
489 PRK10253 iron-enterobactin tra 100.0 3.4E-31 7.4E-36 298.5 17.2 195 1-234 35-232 (265)
490 cd03300 ABC_PotA_N PotA is an 100.0 6.6E-31 1.4E-35 290.5 19.1 191 1-234 28-219 (232)
491 PRK15112 antimicrobial peptide 100.0 3.9E-31 8.6E-36 298.1 17.7 192 1-234 41-238 (267)
492 cd03235 ABC_Metallic_Cations A 100.0 2.3E-31 5E-36 290.6 15.2 185 1-228 27-213 (213)
493 PRK13633 cobalt transporter AT 100.0 3.4E-31 7.4E-36 300.5 17.2 191 1-235 38-233 (280)
494 PRK10522 multidrug transporter 100.0 6.3E-31 1.4E-35 327.0 21.1 206 694-930 322-531 (547)
495 PRK11124 artP arginine transpo 100.0 3.6E-31 7.8E-36 294.9 17.0 189 1-233 30-228 (242)
496 cd03236 ABC_RNaseL_inhibitor_d 100.0 3.5E-31 7.7E-36 294.2 16.5 191 721-931 15-221 (255)
497 PRK10575 iron-hydroxamate tran 100.0 3.8E-31 8.3E-36 298.1 16.9 195 1-234 39-236 (265)
498 PRK13645 cbiO cobalt transport 100.0 4E-31 8.6E-36 301.7 17.0 191 1-234 39-239 (289)
499 PRK13649 cbiO cobalt transport 100.0 4.8E-31 1E-35 300.0 17.7 189 1-234 35-233 (280)
500 PRK14268 phosphate ABC transpo 100.0 6.1E-31 1.3E-35 295.5 18.1 191 1-234 40-241 (258)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-194 Score=1772.90 Aligned_cols=1211 Identities=56% Similarity=0.928 Sum_probs=1107.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
|+.++||+||||||||++|+|..+......|+|++||.+.++...++.++|++|+|.|+|.+||||+|.|+++|+++..|
T Consensus 143 m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r 222 (1391)
T KOG0065|consen 143 MTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSR 222 (1391)
T ss_pred eEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccc
Confidence 58899999999999999999999876566889999999998887788999999999999999999999999999999887
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
++ +..+.+++ .+.+|.+++.+||.+|+||+||+++.||+||||||||++|++++
T Consensus 223 ~~---~~~R~e~~-----------------------~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v 276 (1391)
T KOG0065|consen 223 YD---EVSRREKL-----------------------AAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLV 276 (1391)
T ss_pred cc---cccHHHHH-----------------------HHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeee
Confidence 75 22222221 12578899999999999999999999999999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHHhC
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFESC 240 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~~~ 240 (1293)
.+++++++||+|+|||+.++.+++++|+++++..+.|.+++++||+++++++||+|++|++|+++|+||.+++++||+++
T Consensus 277 ~~~~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~ 356 (1391)
T KOG0065|consen 277 GPASILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDM 356 (1391)
T ss_pred cCcceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCCcchhhhhhcCCCCCCCCCHHHHHHHHHhcccchhhHhhccCCCCCCcCcccccccccCCC
Q 000773 241 GFCCPERKGTADFLQEVTSRKDQEQYWADRSKPYRYISVTEFANRFKSFHIGMHLENQLSVPFDKSQGHRAAIVFKKYTV 320 (1293)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1293)
||.||++++++||++++++..++.++|.....++...+.+++.+.|.+++.+..+.++++.+.++.+.++.+...+.|..
T Consensus 357 Gf~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v 436 (1391)
T KOG0065|consen 357 GFKCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSV 436 (1391)
T ss_pred CccCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceec
Confidence 99999999999999999998888888888888888888899999999999999999999999998888888888999999
Q ss_pred CHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhhcccCCCCCcCcchhhhHHHHHHHHHHHHHHHHHHHHh
Q 000773 321 PKMELLKACWDKEWLLIKRNSFVYVSKTVQLIIVAIIASTVFLRTRMHTRNENDGALFIGALLFSMIINMFNGFAELAMT 400 (1293)
Q Consensus 321 ~~~~~~~~l~~r~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 400 (1293)
++|.|++.|+.|.|..++||..++....++.+++++++|++|++++. .+..+...+.|++||++++.+++++++++..
T Consensus 437 ~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~ 514 (1391)
T KOG0065|consen 437 PYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALT 514 (1391)
T ss_pred cHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999883 4555677889999999999999999999999
Q ss_pred hhhhhhhHhhhcCCCccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000773 401 IQRFPVFYKQRDLMFHPVWTFTLPTFLLRIPISIFESVVWVVVTYYTIGFAPEASRFFKNFLLVFLIQQMAAAMFRLIAG 480 (1293)
Q Consensus 401 ~~~~~~~~~~~~~~~y~~~~y~la~~l~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~l~~~~~~~~~~~~~~ 480 (1293)
++++|+++|||+..+|++|++.++.++.++|+.++.+++|.+|.||++|+.++|.+||.+++++++.+.+++++++++++
T Consensus 515 ~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~ 594 (1391)
T KOG0065|consen 515 FQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIAS 594 (1391)
T ss_pred HhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchHHHHHHHHHHHHHHHHhcccccCCCCCCcchhhhhhhCHHHHHHHHHHHhhcCCCccccccC----------CC-
Q 000773 481 VCRTMIIANTGGALTLLVVFLLGGFIVPKGQIPNWWEWGYWVSPLAYGYNAFAVNEMYAPRWMNRLA----------SD- 549 (1293)
Q Consensus 481 ~~~s~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~al~~ne~~~~~~~~~~~----------~~- 549 (1293)
+++++..|+..+++..+++.+++||+||...||+||+|++|++|+.|++++++.|||.+.+|.|... ..
T Consensus 595 l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~ 674 (1391)
T KOG0065|consen 595 LSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKV 674 (1391)
T ss_pred hcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998711 11
Q ss_pred ---cccccchhhhhccCcc-----cCCcchhHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccchHhHHHHHHHhhhhc
Q 000773 550 ---NVTKLGAAVLNNFDIP-----AHRDWYWIGAAALSGFIVLFNVLFTFTLMYLNPPGKPQAVLSEEAAAEMVAEQEES 621 (1293)
Q Consensus 550 ---~~~~~g~~~l~~~~~~-----~~~~~~~~~~~~l~~~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (1293)
.....|.+++...++. ....|+|+++++++++.++|++++.+++.|.++....+.....+...+...
T Consensus 675 c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~----- 749 (1391)
T KOG0065|consen 675 CAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKK----- 749 (1391)
T ss_pred chhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhc-----
Confidence 1256788888877776 777899999999999999999999999999998776665544222111000
Q ss_pred cccccccCCCCcCCCCCCCCCCCCcCchhHHHHHhhcCCCCCCCCCCCCCchhhhhcCCCCCCCccccccceeEEEeeeE
Q 000773 622 KEEPRLVRPQSKKDSYPRSLSSSDANNSREMAIRRMCSRSNPNELSRNDDSNLEAAKGVAPKRGMVLPFTPLAMSFDSVY 701 (1293)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1293)
...+.... ..+ ......+.+.+++..|..+..++++||.
T Consensus 750 ---------------~~~~~~~~------------------~~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~V~ 788 (1391)
T KOG0065|consen 750 ---------------VKSAGSSS------------------EIE--------KLDDSSHQEKNKMVLPFTPLSLTFKDVF 788 (1391)
T ss_pred ---------------chhccccc------------------ccc--------ccccccccccccccCCCccccccccceE
Confidence 00000000 000 0000011135567778888899999999
Q ss_pred EEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccce
Q 000773 702 YYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARI 781 (1293)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~ 781 (1293)
|.++++-.++..+ +++++|+|||+.++||.++||||+||||||||||+|+||.+.|.++|+|.+||.|.++..++|.
T Consensus 789 ~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~ 865 (1391)
T KOG0065|consen 789 YWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARV 865 (1391)
T ss_pred EEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccc
Confidence 9999887766555 6789999999999999999999999999999999999999999999999999999988889999
Q ss_pred EEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000773 782 SGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVEL 861 (1293)
Q Consensus 782 ~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL 861 (1293)
+|||.|+|.|.|.+||||.|.|+|.+|++...+.+++.+.|+++++.++|.+++|.+||.++ +|||.+||||++||.+|
T Consensus 866 ~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVEL 944 (1391)
T KOG0065|consen 866 SGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVEL 944 (1391)
T ss_pred cceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred hhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCChhHHH
Q 000773 862 VANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKVI 940 (1293)
Q Consensus 862 ~~~p-~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~~~~~~ 940 (1293)
+.|| .||||||||||||+.++..|++.+|+++++|+||+||+|||+.++++.||++++|++||+++|.||.+++++.++
T Consensus 945 vA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li 1024 (1391)
T KOG0065|consen 945 VANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLI 1024 (1391)
T ss_pred ecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHH
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCcccchhhccchHHHhhhchhHHHHHhhcHHHHHHHHHHhhhcCCCCC-CCCccccccCCchhH
Q 000773 941 EYYEAIPGVPKIKEKYNPATWMLEVSSAAAEVRLGMDFADAYKSSSLCQRNKALVNELSTPPRG-AKDLYFATQYSQSTW 1019 (1293)
Q Consensus 941 ~~~~~~~~~~~~~~~~n~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 1019 (1293)
+||+++++.+ |+...|||||++|+++...+.....||++.|+.|++++++++++++++.+++. ..+..++++|++|+|
T Consensus 1025 ~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~ 1103 (1391)
T KOG0065|consen 1025 EYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLW 1103 (1391)
T ss_pred HHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHH
Confidence 9999998874 67667999999999998777777889999999999999999999999988777 677778888999999
Q ss_pred HHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHh
Q 000773 1020 GQFKSCLWKQWWTYWRSPDYNLVRCCFTLACALMIGTVFWKVGTKREDTTDLTMIIGAMYAAILFVGISNCSTVQPVVAV 1099 (1293)
Q Consensus 1020 ~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~ 1099 (1293)
.|++.++||+++.+||+|.++.+|++..++.|+++|+.||++|. +.+++++.+|++|.++++.+..++....+.+..
T Consensus 1104 ~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~ 1180 (1391)
T KOG0065|consen 1104 YQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVAT 1180 (1391)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhh
Confidence 99999999999999999999999999999999999999999985 689999999999999999988777777788888
Q ss_pred hhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhceeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000773 1100 ERTVFYRERAAGMYSALPYAIAQVIVEIPYVLFQTTYYTLIVYAMVSFEWTAAKFWWFFFVTFFSFLYFTYYGMMTVSIT 1179 (1293)
Q Consensus 1100 er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1293)
||.+++||+++|+||+.+|++|++++|+|+.++++++|.+|+|+++||.+++.+|+||++.+++..++.+.+|+|+.+++
T Consensus 1181 e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~t 1260 (1391)
T KOG0065|consen 1181 ERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLT 1260 (1391)
T ss_pred hhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhccccCcc----hhhhHhhhCHHHHHHHHHHHHhhCCCcccccccC-----CCCCCCHHH
Q 000773 1180 PNHQVAAIFAAAFYALFNLFSGFFIPRP----WWIWYYWICPVAWTVYGLIVSQYGDVEDSISVPG-----MAQKPTIKA 1250 (1293)
Q Consensus 1180 ~~~~~a~~~~~~~~~~~~lf~G~~i~~~----~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~~~~-----~~~~~~~~~ 1250 (1293)
||.++|+.+.++++.++.+|||+++|++ ||+|+||+||+.|.++|++..+++|.+..|...+ +++.++|++
T Consensus 1261 Pn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge 1340 (1391)
T KOG0065|consen 1261 PNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGE 1340 (1391)
T ss_pred CChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHH
Confidence 9999999999999999999999999987 9999999999999999999999999887774322 234579999
Q ss_pred HHHhhcC----CCCCCchhHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000773 1251 YIEDHFG----YEPDFMGPVAAVLVAFTVFFAFMFAFCIKTLNFQTR 1293 (1293)
Q Consensus 1251 ~~~~~~~----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1293 (1293)
|+.+.+| +.++.......+.++|.+++.+++.++.++.++++|
T Consensus 1341 ~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1341 FMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 9999999 777766666777888999999999999999999886
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.9e-191 Score=1877.81 Aligned_cols=1274 Identities=86% Similarity=1.380 Sum_probs=1091.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+||||||||||||+|+|+++|+..++|+|.+||+++++...++.++||+|+|.|++.+||+||+.|++++++...+
T Consensus 193 ~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~ 272 (1470)
T PLN03140 193 MTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTR 272 (1470)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999886667999999999887655567899999999999999999999999988765444
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
++...+..+.+++.+..++.+++.+++....++.+.+..++.+++.+||++|+||.||++..++|||||||||+||++|+
T Consensus 273 ~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~ 352 (1470)
T PLN03140 273 YDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIV 352 (1470)
T ss_pred ccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhc
Confidence 43333333334333334445555566665555565667789999999999999999999999999999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHHhC
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFESC 240 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~~~ 240 (1293)
++|++++|||||+|||+.++.++++.|+++++..|+|+|+++|||+++++++||+|++|++|+++|+|+.+++.+||+++
T Consensus 353 ~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~l 432 (1470)
T PLN03140 353 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESC 432 (1470)
T ss_pred CCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHc
Confidence 99999999999999999999999999999988778999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCCcchhhhhhcCCCCCCCCCHHHHHHHHHhcccchhhHhhccCCCCCCcCcccccccccCCC
Q 000773 241 GFCCPERKGTADFLQEVTSRKDQEQYWADRSKPYRYISVTEFANRFKSFHIGMHLENQLSVPFDKSQGHRAAIVFKKYTV 320 (1293)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1293)
||.||++.+++||++++++..+++++|.....|++..+.+++.+.|+++..++...+++..+.++...++.....+.|..
T Consensus 433 Gf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 512 (1470)
T PLN03140 433 GFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSV 512 (1470)
T ss_pred CCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcC
Confidence 99999999999999999987666555554445555678899999999988776666655544433333333333456889
Q ss_pred CHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhhcccCCCCCcCcchhhhHHHHHHHHHHHHHHHHHHHHh
Q 000773 321 PKMELLKACWDKEWLLIKRNSFVYVSKTVQLIIVAIIASTVFLRTRMHTRNENDGALFIGALLFSMIINMFNGFAELAMT 400 (1293)
Q Consensus 321 ~~~~~~~~l~~r~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 400 (1293)
+++.|++.|++|.|+.++||+..+..+.++.+++|+++|++|++++.+.....+...+.|++||.+++.+++++.++..+
T Consensus 513 s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~ 592 (1470)
T PLN03140 513 PKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALM 592 (1470)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876544444556678999999999999999999999
Q ss_pred hhhhhhhHhhhcCCCccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000773 401 IQRFPVFYKQRDLMFHPVWTFTLPTFLLRIPISIFESVVWVVVTYYTIGFAPEASRFFKNFLLVFLIQQMAAAMFRLIAG 480 (1293)
Q Consensus 401 ~~~~~~~~~~~~~~~y~~~~y~la~~l~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~l~~~~~~~~~~~~~~ 480 (1293)
+.++|+++|||+..+|++++|++++++.++|+.++.+++|++|+|||+|+.+++.+||.|++++++...++.++++++++
T Consensus 593 ~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a 672 (1470)
T PLN03140 593 IQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIAS 672 (1470)
T ss_pred HhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchHHHHHHHHHHHHHHHHhcccccCCCCCCcchhhhhhhCHHHHHHHHHHHhhcCCCccccccCCCcccccchhhhh
Q 000773 481 VCRTMIIANTGGALTLLVVFLLGGFIVPKGQIPNWWEWGYWVSPLAYGYNAFAVNEMYAPRWMNRLASDNVTKLGAAVLN 560 (1293)
Q Consensus 481 ~~~s~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~al~~ne~~~~~~~~~~~~~~~~~~g~~~l~ 560 (1293)
+++++..|+..+++..+++++++||++|.+.||+||+|++|+||+.|++++++.|||.+.+|.+....+.....|..+|.
T Consensus 673 ~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~ 752 (1470)
T PLN03140 673 VCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLN 752 (1470)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988877543222233568999999
Q ss_pred ccCcccCCcchhHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccchHhHHHHHHHhhhhccccccccCCCCcCCCCCCC
Q 000773 561 NFDIPAHRDWYWIGAAALSGFIVLFNVLFTFTLMYLNPPGKPQAVLSEEAAAEMVAEQEESKEEPRLVRPQSKKDSYPRS 640 (1293)
Q Consensus 561 ~~~~~~~~~~~~~~~~~l~~~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1293)
.+++...+.|+|++++++++++++|++++++++.+.+.....+.........+...+ .... +. .......
T Consensus 753 ~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~--~~~~~~~ 822 (1470)
T PLN03140 753 IFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGE-EDSI-------PR--SLSSADG 822 (1470)
T ss_pred hcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcc-cccc-------cc--ccccccc
Confidence 999998888999999999999999999999999998755444333221110000000 0000 00 0000000
Q ss_pred CCCCCcCchhHHHHHhhcCCCCCCCCCCCCCchhhhhcCCCCCCCccccccceeEEEeeeEEEEECCccccccccccccc
Q 000773 641 LSSSDANNSREMAIRRMCSRSNPNELSRNDDSNLEAAKGVAPKRGMVLPFTPLAMSFDSVYYYVDMPPEMKEQGVAEDKL 720 (1293)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (1293)
... +. . ...................+......+++++.+|..|..++|+|++|.++.+...++.+...+++
T Consensus 823 -----~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~ 893 (1470)
T PLN03140 823 -----NNT-RE--V-AIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRL 893 (1470)
T ss_pred -----ccc-cc--c-cccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCc
Confidence 000 00 0 00000000000000000000001122345667788899999999999998876655555556677
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKES 800 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~ 800 (1293)
++|+|||++++|||++||+||||||||||||+|+|+.++|+.+|+|.+||.+.+...+++.+|||+|+|.+++.+||+||
T Consensus 894 ~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~ 973 (1470)
T PLN03140 894 QLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRES 973 (1470)
T ss_pred eEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHH
Confidence 89999999999999999999999999999999999987667889999999887654566779999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000773 801 LIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 880 (1293)
Q Consensus 801 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~ 880 (1293)
|.|++.++.+...+.+++.++++++++.+||.+++|+.+|.+.+++|||||||||+||++|+.+|++|||||||+|||+.
T Consensus 974 L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~ 1053 (1470)
T PLN03140 974 LIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1053 (1470)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Confidence 99998888766566666777899999999999999999998877899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCChhHHHHHHHhCCCCCCCCCCCCccc
Q 000773 881 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKVIEYYEAIPGVPKIKEKYNPAT 960 (1293)
Q Consensus 881 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~a~ 960 (1293)
++..+++.|++++++|+|||+++|||+.++++.||++++|.+||+++|+|+.+++.+++.+||++++|.++||+.+||||
T Consensus 1054 ~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd 1133 (1470)
T PLN03140 1054 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPAT 1133 (1470)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchh
Confidence 99999999999998899999999999977889999999998779999999998777789999999877777999999999
Q ss_pred chhhccchHHHhhhchhHHHHHhhcHHHHHHHHHHhhhcCCCCCCCCccccccCCchhHHHHHHHHHHHHHHHhcChhhH
Q 000773 961 WMLEVSSAAAEVRLGMDFADAYKSSSLCQRNKALVNELSTPPRGAKDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYN 1040 (1293)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~ 1040 (1293)
|++|+.+...+.....|+++.|+.|+.+++..+.++++..+++...+..+..+|+.++|+|+++|++|+++++||||.++
T Consensus 1134 ~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~ 1213 (1470)
T PLN03140 1134 WMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYN 1213 (1470)
T ss_pred hhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHH
Confidence 99999876554445568999999999998887777766655544444445567889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHhhhHHHHHHhcCCCCChHHHHH
Q 000773 1041 LVRCCFTLACALMIGTVFWKVGTKREDTTDLTMIIGAMYAAILFVGISNCSTVQPVVAVERTVFYRERAAGMYSALPYAI 1120 (1293)
Q Consensus 1041 ~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~ 1120 (1293)
.+|+++++++|+++|++||+++++..+.+++++++|++|++++++++.++++++|.+..||++|+|||++|+|++++|++
T Consensus 1214 ~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~l 1293 (1470)
T PLN03140 1214 LVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAI 1293 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHH
Confidence 99999999999999999999998777788999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhceeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhh
Q 000773 1121 AQVIVEIPYVLFQTTYYTLIVYAMVSFEWTAAKFWWFFFVTFFSFLYFTYYGMMTVSITPNHQVAAIFAAAFYALFNLFS 1200 (1293)
Q Consensus 1121 a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~ 1200 (1293)
|++++|+|+.++.+++|.+|+|||+||++++++||+|+++++++.++++++|+++++++|+.++|..+++++++++++|+
T Consensus 1294 a~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~ 1373 (1470)
T PLN03140 1294 AQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFS 1373 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcc----hhhhHhhhCHHHHHHHHHHHHhhCCCcccccccCCCCCCCHHHHHHhhcCCCCCCchhHHHHHHHHHHH
Q 000773 1201 GFFIPRP----WWIWYYWICPVAWTVYGLIVSQYGDVEDSISVPGMAQKPTIKAYIEDHFGYEPDFMGPVAAVLVAFTVF 1276 (1293)
Q Consensus 1201 G~~i~~~----~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 1276 (1293)
||++|++ ||+|++|+||++|+++|+++|||++.+.+|.+|+..+..++.+|+++.|||+++++|++++|+++|.++
T Consensus 1374 Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~ 1453 (1470)
T PLN03140 1374 GFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVF 1453 (1470)
T ss_pred eeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHH
Confidence 9999986 999999999999999999999999988777777633335789999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccC
Q 000773 1277 FAFMFAFCIKTLNFQTR 1293 (1293)
Q Consensus 1277 f~~~~~~~l~~~~~~~r 1293 (1293)
|+++++++++++|||||
T Consensus 1454 f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1454 FAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHHHHHHHhhcccC
Confidence 99999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=8.3e-168 Score=1667.53 Aligned_cols=1206 Identities=34% Similarity=0.548 Sum_probs=980.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC-CceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRD-LKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~-~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||||+|+|+.++. ...+|+|.+||.++++. ..++.++||+|+|.+++.+||+||+.|+++++.+
T Consensus 89 ~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~ 168 (1394)
T TIGR00956 89 LTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTP 168 (1394)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCC
Confidence 58999999999999999999997421 12499999999887532 2345689999999999999999999999876542
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
..+... ..+ .+ ..++.++.+++.+||++++||.||++..++|||||||||+||+
T Consensus 169 ~~~~~~---~~~----------~~-------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~ 222 (1394)
T TIGR00956 169 QNRPDG---VSR----------EE-------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAE 222 (1394)
T ss_pred CCCCCC---CCH----------HH-------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHH
Confidence 111000 000 00 0012346689999999999999999999999999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFF 237 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f 237 (1293)
+|+.+|++++|||||+|||+.++.++++.|++++++.|+|+|+++|||+++++++||++++|++|+++++|+++++.+||
T Consensus 223 aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF 302 (1394)
T TIGR00956 223 ASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYF 302 (1394)
T ss_pred HHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999987678999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCChhhHHHHhcCCcchhhhhhcCCCCCCCCCHHHHHHHHHhcccchhhHhhccCCCCCC-----------
Q 000773 238 ESCGFCCPERKGTADFLQEVTSRKDQEQYWADRSKPYRYISVTEFANRFKSFHIGMHLENQLSVPFDKS----------- 306 (1293)
Q Consensus 238 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~----------- 306 (1293)
+++||.||++.+++||+.+++++.++.. +... ......+.+++.+.|+++..++....+.+...++.
T Consensus 303 ~~lG~~~p~~~n~aDfl~~~~~~~~~~~-~~~~-e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (1394)
T TIGR00956 303 EKMGFKCPDRQTTADFLTSLTSPAERQI-KPGY-EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRE 380 (1394)
T ss_pred HHcCCCCCCCCChHHHHHhccChhhhhc-cccc-cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHH
Confidence 9999999999999999999987653221 1110 11123467889999998876554444332211100
Q ss_pred ----cCcccccccccCCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhhcccCCCCCcCcchhhhHHH
Q 000773 307 ----QGHRAAIVFKKYTVPKMELLKACWDKEWLLIKRNSFVYVSKTVQLIIVAIIASTVFLRTRMHTRNENDGALFIGAL 382 (1293)
Q Consensus 307 ----~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~l 382 (1293)
...+.....+.|..++++|++.+++|.++..+||+..+..++++.+++|+++|++|++++.+.. +...+.|++
T Consensus 381 ~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~~~~r~g~l 457 (1394)
T TIGR00956 381 SHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---DFYSRGGAL 457 (1394)
T ss_pred HHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---hHHHHHHHH
Confidence 0000111234577899999999999999999999999999999999999999999999875443 346678999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCCCccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcCccHHHHHHHHH
Q 000773 383 LFSMIINMFNGFAELAMTIQRFPVFYKQRDLMFHPVWTFTLPTFLLRIPISIFESVVWVVVTYYTIGFAPEASRFFKNFL 462 (1293)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~la~~l~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l 462 (1293)
|+++++..+.++.++...+.+|++++|||..++|++++|++|++++++|+.++.+++|++|+|||+|+.+++.+|+.|++
T Consensus 458 f~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l 537 (1394)
T TIGR00956 458 FFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLL 537 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHH
Confidence 99999989988888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCcchhhhhhhCHHHHHHHHHHHhhcCCCcc
Q 000773 463 LVFLIQQMAAAMFRLIAGVCRTMIIANTGGALTLLVVFLLGGFIVPKGQIPNWWEWGYWVSPLAYGYNAFAVNEMYAPRW 542 (1293)
Q Consensus 463 ~~~l~~~~~~~~~~~~~~~~~s~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~al~~ne~~~~~~ 542 (1293)
++++...++.+++++++++++++..|+.++++..+++++++||++|.++||+||+|++|+||+.|+|++++.|||.+..+
T Consensus 538 ~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~ 617 (1394)
T TIGR00956 538 ILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRF 617 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cccc--CC----------C-c----------ccccchhhhhc-cCcccCCcchhHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 000773 543 MNRL--AS----------D-N----------VTKLGAAVLNN-FDIPAHRDWYWIGAAALSGFIVLFNVLFTFTLMYLNP 598 (1293)
Q Consensus 543 ~~~~--~~----------~-~----------~~~~g~~~l~~-~~~~~~~~~~~~~~~~l~~~~v~f~~~~~~~l~~~~~ 598 (1293)
.|.. +. + . ....|+++|.. +++ ...|.|++++++++++++|.+++++++.+.+.
T Consensus 618 ~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~--~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 618 ECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQY--YNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred cccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCc--ccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7741 11 0 0 12467778874 454 45689999999999999999999999999875
Q ss_pred CCCCCccchHhHHHHHHHhhhhccccccccCCCCcCCCCCCCCCCCCcCchhHHHHHhhcCC-C--CCCCCCCCCCchhh
Q 000773 599 PGKPQAVLSEEAAAEMVAEQEESKEEPRLVRPQSKKDSYPRSLSSSDANNSREMAIRRMCSR-S--NPNELSRNDDSNLE 675 (1293)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~ 675 (1293)
....+.............. ... .+ .+.. . ...++.... . .+.+.. .... +
T Consensus 696 ~~~~~~~~~~~~~~~~~~~-~~~-~~---------~~~~------~-------~~~e~~~~~~~~~~~~~~~-~~~~--~ 748 (1394)
T TIGR00956 696 AKQKGEILVFRRGSLKRAK-KAG-ET---------SASN------K-------NDIEAGEVLGSTDLTDESD-DVND--E 748 (1394)
T ss_pred cCCCCceEeeccccccchh-hcc-cc---------cccc------c-------ccccccccCCCCccccccc-cccc--c
Confidence 5443332221110000000 000 00 0000 0 000000000 0 000000 0000 0
Q ss_pred hhcCCCCCCCccccccceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhC
Q 000773 676 AAKGVAPKRGMVLPFTPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAG 755 (1293)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g 755 (1293)
.. .+. ......++|+|++|.++.+ .+++.+|+|||++++|||++||+||||||||||||+|+|
T Consensus 749 ~~---~~~-----~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag 811 (1394)
T TIGR00956 749 KD---MEK-----ESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAE 811 (1394)
T ss_pred cc---ccc-----cCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 00 000 0112357899999876421 134679999999999999999999999999999999999
Q ss_pred CCCCC-ceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000773 756 RKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL 834 (1293)
Q Consensus 756 ~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~ 834 (1293)
+.+++ +.+|+|.+||++... .+++.+|||+|+|.+++.+||+||+.|++.++.+...+++++.++++++++.+||.++
T Consensus 812 ~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~ 890 (1394)
T TIGR00956 812 RVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESY 890 (1394)
T ss_pred CCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 87644 356999999998753 4567899999999999999999999999988876556666777789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH
Q 000773 835 KDAIVGLPGVTGLSIEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 913 (1293)
Q Consensus 835 ~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~-illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~ 913 (1293)
+|+.++.++ .+|||||||||+||+||+.+|+ ||||||||+|||+.++..+++.|++++++|+|||+++|||+..+++.
T Consensus 891 ~d~~v~~~~-~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~ 969 (1394)
T TIGR00956 891 ADAVVGVPG-EGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEE 969 (1394)
T ss_pred CCCeeCCCC-CCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHh
Confidence 999998654 3899999999999999999997 99999999999999999999999999888999999999999667788
Q ss_pred HhHhheeecCcEEEEeCCCCCChhHHHHHHHhCCCCCCCCCCCCcccchhhccchHHHhhhchhHHHHHhhcHHHHHHHH
Q 000773 914 FDELLLLKRGGQVIYSGPLGRNSHKVIEYYEAIPGVPKIKEKYNPATWMLEVSSAAAEVRLGMDFADAYKSSSLCQRNKA 993 (1293)
Q Consensus 914 ~d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 993 (1293)
||++++|++||+++|.|+.++..+++.+||+.. |.++||+++|||||++|+.+...+.....++.+.|+.|+.+++..+
T Consensus 970 ~D~vl~L~~GG~iv~~G~~~~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 970 FDRLLLLQKGGQTVYFGDLGENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred cCEEEEEcCCCEEEEECCcccccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHH
Confidence 999999998779999999987777899999987 6557999999999999998754333334578999999988776655
Q ss_pred HHhhhcCCCCCC---CCccccccCCchhHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCCCCCChhh
Q 000773 994 LVNELSTPPRGA---KDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRCCFTLACALMIGTVFWKVGTKREDTTD 1070 (1293)
Q Consensus 994 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~ 1070 (1293)
.++....+.... .+.....+++.|+|+|+++|++|+++++||||.++++|+++++++|+++|++||++++ ++++
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHH
Confidence 544433221111 1111124578999999999999999999999999999999999999999999999987 4678
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhHhhhHHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhceeeccccccc
Q 000773 1071 LTMIIGAMYAAILFVGISNCSTVQPVVAVERTVF-YRERAAGMYSALPYAIAQVIVEIPYVLFQTTYYTLIVYAMVSFEW 1149 (1293)
Q Consensus 1071 ~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~-~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~ 1149 (1293)
+++++|++|+.+++.++. +..++|.|+.||.+| +||+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+||++
T Consensus 1126 i~~~~g~~f~~~~~~~~~-~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~ 1204 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPL-IQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYW 1204 (1394)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccC
Confidence 999999999988877765 345567788888886 899999999999999999999999999999999999999999998
Q ss_pred chhH-------HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCcc----hhhhHhhhCHH
Q 000773 1150 TAAK-------FWWFFFVTFFSFLYFTYYGMMTVSITPNHQVAAIFAAAFYALFNLFSGFFIPRP----WWIWYYWICPV 1218 (1293)
Q Consensus 1150 ~~~~-------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~----~~~w~~~isp~ 1218 (1293)
++.. |++|+++++++.++++++|+++++++|+..+|+.+++++++++++||||+++++ ||+|++|+||+
T Consensus 1205 ~~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~ 1284 (1394)
T TIGR00956 1205 NASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPF 1284 (1394)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHH
Confidence 8866 999999999999999999999999999999999999999999999999999976 99999999999
Q ss_pred HHHHHHHHHHhhCCCcccccc--------c-CCC------------------------C----CCCHHHHHHhhcCCCCC
Q 000773 1219 AWTVYGLIVSQYGDVEDSISV--------P-GMA------------------------Q----KPTIKAYIEDHFGYEPD 1261 (1293)
Q Consensus 1219 ~y~~~~l~~ne~~~~~~~~~~--------~-~~~------------------------~----~~~~~~~~~~~~~~~~~ 1261 (1293)
+|+++|++.|||++.+.+|.. | +.+ | ..++.+++. .+|++.+
T Consensus 1285 ~y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~ 1363 (1394)
T TIGR00956 1285 TYLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYS 1363 (1394)
T ss_pred HHHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCccc
Confidence 999999999999988765421 1 111 1 114455554 7899999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000773 1262 FMGPVAAVLVAFTVFFAFMFAFCIKTLNFQT 1292 (1293)
Q Consensus 1262 ~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1292 (1293)
+.|+|++|+++|++++ ++++++|.+..+.+
T Consensus 1364 ~~w~~~~i~~~~~~~~-~~~~~~l~~~~r~~ 1393 (1394)
T TIGR00956 1364 GRWRNFGIFIAFIFFN-IIATVFFYWLARVP 1393 (1394)
T ss_pred ccccchhhhhHHHHHH-HHHHHhhheEEEcC
Confidence 9999999999999888 77788888765544
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-93 Score=881.08 Aligned_cols=576 Identities=32% Similarity=0.567 Sum_probs=499.8
Q ss_pred cceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-ceeEEEEEc
Q 000773 691 TPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIRIS 769 (1293)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~-~~~G~i~~~ 769 (1293)
.++.+.|+|+++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3567899999988765321 3578999999999999999999999999999999999998764 689999999
Q ss_pred CccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 770 GFPKKQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 770 g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
|++...+.+++.+|||.|+|.++|++||+|+|.|+|.+|++...+++++.++|+++++.+||.+++|+++|+++.|++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98887778899999999999999999999999999999999988999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||||+||.+|++||+||+|||||||||+.++.++++.|+++|++|+|||+|+|||+.++++.||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 899999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCCCCCCCcccchhhccchH--HHhhhchhHHHHHhh------cHHHHHHHH-HHhhhcC
Q 000773 930 GPLGRNSHKVIEYYEAIPGVPKIKEKYNPATWMLEVSSAA--AEVRLGMDFADAYKS------SSLCQRNKA-LVNELST 1000 (1293)
Q Consensus 930 g~~~~~~~~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~~~--~~~~~~~~~~~~~~~------s~~~~~~~~-~~~~~~~ 1000 (1293)
|++ +++.+||++. |. +||++.||+||++|+.+.+ .+.. .+..+.++. .....+... .......
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTREL--EEAVRIAKLINKFSQTDNLKKTLEALEKSLST 324 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhH--HhHHHHHHHhhhccccchhhhhHHHHhhhccc
Confidence 997 5789999999 55 4999999999999988742 1100 011111111 111111100 0000100
Q ss_pred CCCCCCCccccccCCchhHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHH
Q 000773 1001 PPRGAKDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRCCFTLACALMIGTVFWKVGTKREDTTDLTMIIGAMYA 1080 (1293)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~ 1080 (1293)
.. ..+....++||.|+..|++|.+++.+|||.+...|+++.+++|+++|++||+++++ ..+++++.|++|+
T Consensus 325 ~~------~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~ 395 (613)
T KOG0061|consen 325 SK------KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFF 395 (613)
T ss_pred cc------ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHH
Confidence 00 01111168999999999999999999999999999999999999999999999764 4556689999999
Q ss_pred HHHHHHHHhhhhhhhhhHhhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhceeecccccccchhHHHHHHHH
Q 000773 1081 AILFVGISNCSTVQPVVAVERTVFYRERAAGMYSALPYAIAQVIVEIPYVLFQTTYYTLIVYAMVSFEWTAAKFWWFFFV 1160 (1293)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~ 1160 (1293)
.+.++.+.++.+.++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|++|+|||+|++++..+|++|+++
T Consensus 396 ~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~ 475 (613)
T KOG0061|consen 396 ILSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLI 475 (613)
T ss_pred HHHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHH
Confidence 99999898988888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCcc----hhhhHhhhCHHHHHHHHHHHHhhCCCccc
Q 000773 1161 TFFSFLYFTYYGMMTVSITPNHQVAAIFAAAFYALFNLFSGFFIPRP----WWIWYYWICPVAWTVYGLIVSQYGDVEDS 1236 (1293)
Q Consensus 1161 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~----~~~w~~~isp~~y~~~~l~~ne~~~~~~~ 1236 (1293)
+++..++++++|++++++.||...|..++++++++|++|+||+++.+ ||+|++|+|+++|++||+++|||++....
T Consensus 476 ~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~ 555 (613)
T KOG0061|consen 476 ILLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSR 555 (613)
T ss_pred HHHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccc
Confidence 99999999999999999999999999999999999999999999976 99999999999999999999999973333
Q ss_pred ccccC-CCCCCCHHHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000773 1237 ISVPG-MAQKPTIKAYIEDHFGYEPDFMGPVAAVLVAFTVFFAFMFAFCIKTLNFQTR 1293 (1293)
Q Consensus 1237 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1293 (1293)
|...+ ..+..+. +.++..++++..+.|.++.+++++.++|+++++++|++..+.+|
T Consensus 556 ~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~~ 612 (613)
T KOG0061|consen 556 CFLSGNLCCESTG-EDVLKQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRKR 612 (613)
T ss_pred cccCcCCcccccH-HHHHHhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 31111 2232344 44555899999999999999999999999999999999777654
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.4e-93 Score=885.63 Aligned_cols=583 Identities=25% Similarity=0.449 Sum_probs=482.2
Q ss_pred cceeEEEeeeEEEEECCc----------------ccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHh
Q 000773 691 TPLAMSFDSVYYYVDMPP----------------EMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLA 754 (1293)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~ 754 (1293)
.++++.|.+++|+++... ..+++.++++++.+|+|||+++++||++||+||||||||||||+|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999986442 2233455677788999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000773 755 GRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL 834 (1293)
Q Consensus 755 g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~ 834 (1293)
|+.+++..+|+|.+||++.... .++.+|||+|++.+++.+||+||+.+.+.++.+...+++++.++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999886533 345689999999999999999999998877765555566666778999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHH
Q 000773 835 KDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 914 (1293)
Q Consensus 835 ~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 914 (1293)
+|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++.+.+
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999987788999
Q ss_pred hHhheeecCcEEEEeCCCCCChhHHHHHHHhCCCCCCCCCCCCcccchhhccchHHHh------h---hchhHHHHHhhc
Q 000773 915 DELLLLKRGGQVIYSGPLGRNSHKVIEYYEAIPGVPKIKEKYNPATWMLEVSSAAAEV------R---LGMDFADAYKSS 985 (1293)
Q Consensus 915 d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~~~~~~------~---~~~~~~~~~~~s 985 (1293)
|++++|.+ |++++.|+. +++.+||+++ |+ +||+++|||||++|+.+...+. . ......+.|+..
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 899999996 5789999999 55 5899999999999998643110 0 001223344321
Q ss_pred HHHHHHHHHHhh--hcC-CCC-----CCCCcc-ccccCCchhHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Q 000773 986 SLCQRNKALVNE--LST-PPR-----GAKDLY-FATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRCCFTLACALMIGT 1056 (1293)
Q Consensus 986 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~ 1056 (1293)
. .++.....+. ... ... ..+... ....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111110 000 000 000000 11224578999999999999998 89999999999999999999999
Q ss_pred HhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHhhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000773 1057 VFWKVGTKREDTTDLTMIIGAMYAAILFVGISNCSTVQPVVAVERTVFYRERAAGMYSALPYAIAQVIVEIPYVLFQTTY 1136 (1293)
Q Consensus 1057 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~ 1136 (1293)
+||+++ ..+++++.|++||+++++++.+++++++.|+.||++|+||+.+|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 457889999999999998888888888999999999999999999999999999999999999999999
Q ss_pred hhceeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCc-c-hhhhHhh
Q 000773 1137 YTLIVYAMVSFEWTAAKFWWFFFVTFFSFLYFTYYGMMTVSITPNHQVAAIFAAAFYALFNLFSGFFIPR-P-WWIWYYW 1214 (1293)
Q Consensus 1137 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~-~-~~~w~~~ 1214 (1293)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++|+..+|+.+++++++++++||||+++. | ||+|++|
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~~ip~~~~W~~y 580 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVHKLPSCMAWIKY 580 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHhhchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999973 2 9999999
Q ss_pred hCHHHHHHHHHHHHhhCCCcc-----cccccCCCCCCCHHHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 000773 1215 ICPVAWTVYGLIVSQYGDVED-----SISVPGMAQKPTIKAYIEDHFGYEPDFMGPVAAVLVAFTVFFAFMFAFCIKTLN 1289 (1293)
Q Consensus 1215 isp~~y~~~~l~~ne~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1289 (1293)
+||++|++||++.|||++.+. +|..+.......+ .+ ....+++....|.++++|++|+++|+++++++|++++
T Consensus 581 lS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 581 ISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASC-KF-VEEDVAGQISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCC-cc-chhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999986542 3322111000011 11 1223444557899999999999999999999999887
Q ss_pred c
Q 000773 1290 F 1290 (1293)
Q Consensus 1290 ~ 1290 (1293)
|
T Consensus 659 ~ 659 (659)
T PLN03211 659 H 659 (659)
T ss_pred C
Confidence 6
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.5e-91 Score=873.13 Aligned_cols=565 Identities=29% Similarity=0.502 Sum_probs=491.7
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-ceeEEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 4577999999999999999999999999999999999986543 357999999998765567788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPG-VTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~-~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
|+||+.|++.++.+...+++++.++++++++.+||.+++|+.+|+++ .++|||||||||+||+||+.+|++++|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999988877666777777889999999999999999999753 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCChhHHHHHHHhCCCCCCCCCC
Q 000773 876 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKVIEYYEAIPGVPKIKEK 955 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1293)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|. +|+++|.|+. +++.+||+++ |. .||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCC
Confidence 9999999999999999988899999999999878999999999998 5899999997 5789999998 54 59999
Q ss_pred CCcccchhhccchHHHh-----hhchhHHHHHhhcHHHHHHHHHHhhhcCCCC---CCCCccccccCCchhHHHHHHHHH
Q 000773 956 YNPATWMLEVSSAAAEV-----RLGMDFADAYKSSSLCQRNKALVNELSTPPR---GAKDLYFATQYSQSTWGQFKSCLW 1027 (1293)
Q Consensus 956 ~n~a~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~q~~~l~~ 1027 (1293)
.|||||++++.+...+. ....++.+.|+.++.+++..........+.. ..........+..+++.|+.+|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 99999999987643221 1123455667766655544333222111110 111111223567899999999999
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHhhhHHHHHH
Q 000773 1028 KQWWTYWRSPDYNLVRCCFTLACALMIGTVFWKVGTKREDTTDLTMIIGAMYAAILFVGISNCSTVQPVVAVERTVFYRE 1107 (1293)
Q Consensus 1028 R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE 1107 (1293)
|++++.||||.++.+|+++.+++|+++|++||+++. +.++++++.|++|++++++++.++....+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999976 45678889999999999999988878888999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHHhhceeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHH
Q 000773 1108 RAAGMYSALPYAIAQVIVEIPYVLFQTTYYTLIVYAMVSFEWTAAKFWWFFFVTFFSFLYFTYYGMMTVSITPNHQVAAI 1187 (1293)
Q Consensus 1108 ~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 1187 (1293)
+.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCcc----hhhhHhhhCHHHHHHHHHHHHhhCCCcc-cccccCC--CCCCCHHHHHHhhcCCCC
Q 000773 1188 FAAAFYALFNLFSGFFIPRP----WWIWYYWICPVAWTVYGLIVSQYGDVED-SISVPGM--AQKPTIKAYIEDHFGYEP 1260 (1293)
Q Consensus 1188 ~~~~~~~~~~lf~G~~i~~~----~~~w~~~isp~~y~~~~l~~ne~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 1260 (1293)
+++++++++++|+||+++.+ ||+|++|+||++|+++|+++|||.+... +|...+. .|..+ ++++++.||++.
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~-g~~~l~~~g~~~ 584 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSS-GEVILETLSFRN 584 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcC-hHHHHHhcCCCc
Confidence 99999999999999999875 9999999999999999999999998764 4421111 12123 467777999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000773 1261 DFMGPVAAVLVAFTVFFAFMFAFCIKTLNFQTR 1293 (1293)
Q Consensus 1261 ~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1293 (1293)
+++|+++++|++|.++|+++++++|++..+++|
T Consensus 585 ~~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 585 ADLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999999877776
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-88 Score=907.46 Aligned_cols=590 Identities=25% Similarity=0.407 Sum_probs=501.4
Q ss_pred cceeEEEeeeEEEEECCcc--c-----------c----cc--cccccccccccceeeeeecCcEEEEECCCCccHHHHHH
Q 000773 691 TPLAMSFDSVYYYVDMPPE--M-----------K----EQ--GVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMD 751 (1293)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~--~-----------~----~~--~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~ 751 (1293)
+.+.+.|+|++........ . . .. +.+..++++|+|||+++++||+++|+||||||||||||
T Consensus 26 ~~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk 105 (1394)
T TIGR00956 26 YKLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLK 105 (1394)
T ss_pred CeeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHH
Confidence 4678999999887632211 0 0 00 12234567999999999999999999999999999999
Q ss_pred HHhCCCCC--CceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCC----CCCHHHHHH-HH
Q 000773 752 VLAGRKTG--GYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAK----EVSKEDKII-FV 822 (1293)
Q Consensus 752 ~l~g~~~~--~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~----~~~~~~~~~-~~ 822 (1293)
+|+|+..+ .+.+|+|.+||.+... ..+++.++|++|+|.+++.+||+||+.|++.++.+. ..+++++.+ .+
T Consensus 106 ~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 185 (1394)
T TIGR00956 106 TIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKHIA 185 (1394)
T ss_pred HHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 99998532 2468999999987643 234567999999999999999999999998877543 234444333 35
Q ss_pred HHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEE
Q 000773 823 EEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVC 901 (1293)
Q Consensus 823 ~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~ 901 (1293)
+++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++++|||||+|||+.++..+++.|++++++ |+|||+
T Consensus 186 ~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii 265 (1394)
T TIGR00956 186 DVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLV 265 (1394)
T ss_pred HHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 6789999999999999998888999999999999999999999999999999999999999999999999875 999999
Q ss_pred EecCCCHHHHHHHhHhheeecCcEEEEeCCCCCChhHHHHHHHhCCCCCCCCCCCCcccchhhccchHHHh---------
Q 000773 902 TIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKVIEYYEAIPGVPKIKEKYNPATWMLEVSSAAAEV--------- 972 (1293)
Q Consensus 902 ~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~a~~~~~~~~~~~~~--------- 972 (1293)
++|||+.++++.||++++|.+ |+++|+|+. +++.+||+++ |+ .||++.|||||++++.+++.+.
T Consensus 266 ~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~l-G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~ 338 (1394)
T TIGR00956 266 AIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKM-GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKV 338 (1394)
T ss_pred EecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHc-CC-CCCCCCChHHHHHhccChhhhhccccccccC
Confidence 999998789999999999985 899999996 5789999999 55 6999999999999998764321
Q ss_pred -hhchhHHHHHhhcHHHHHHHHHHhhhcCCC---------------CCCCCccccccCCchhHHHHHHHHHHHHHHHhcC
Q 000773 973 -RLGMDFADAYKSSSLCQRNKALVNELSTPP---------------RGAKDLYFATQYSQSTWGQFKSCLWKQWWTYWRS 1036 (1293)
Q Consensus 973 -~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~ 1036 (1293)
....++++.|++|+.+++....+++..... ...+.......+..|+|+|+++|++|+++++|||
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd 418 (1394)
T TIGR00956 339 PRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGN 418 (1394)
T ss_pred CCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 123578899999988776555443321110 0000111233577899999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHhhhHHHHHHhcCCCCChH
Q 000773 1037 PDYNLVRCCFTLACALMIGTVFWKVGTKREDTTDLTMIIGAMYAAILFVGISNCSTVQPVVAVERTVFYRERAAGMYSAL 1116 (1293)
Q Consensus 1037 ~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~ 1116 (1293)
|.++++|+++.+++|+++|++||+++. +..+++++.|++|+++++.+++++.++ +.+..||+||+||+.+|+|+++
T Consensus 419 ~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ 494 (1394)
T TIGR00956 419 PSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPS 494 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHH
Confidence 999999999999999999999999986 456788999999999999999887776 4456799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhceeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 000773 1117 PYAIAQVIVEIPYVLFQTTYYTLIVYAMVSFEWTAAKFWWFFFVTFFSFLYFTYYGMMTVSITPNHQVAAIFAAAFYALF 1196 (1293)
Q Consensus 1117 ~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 1196 (1293)
+|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++||..+|+.+++++++++
T Consensus 495 ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~ 574 (1394)
T TIGR00956 495 ADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLAL 574 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccCcc----hhhhHhhhCHHHHHHHHHHHHhhCCCcccccc--cC---C--------CC----------CCCHH
Q 000773 1197 NLFSGFFIPRP----WWIWYYWICPVAWTVYGLIVSQYGDVEDSISV--PG---M--------AQ----------KPTIK 1249 (1293)
Q Consensus 1197 ~lf~G~~i~~~----~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~~--~~---~--------~~----------~~~~~ 1249 (1293)
++|+||++|.+ ||+|++|+||++|+|||+++|||++..++|.. |. + .| ..++.
T Consensus 575 ~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~ 654 (1394)
T TIGR00956 575 SIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGD 654 (1394)
T ss_pred HHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHH
Confidence 99999999986 99999999999999999999999998876631 21 0 11 12456
Q ss_pred HHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000773 1250 AYIEDHFGYEPDFMGPVAAVLVAFTVFFAFMFAFCIKTLNFQ 1291 (1293)
Q Consensus 1250 ~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1291 (1293)
+|+...||++.+|+|+|++||++|+++|+++++++++++++.
T Consensus 655 ~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~~ 696 (1394)
T TIGR00956 655 DYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKGA 696 (1394)
T ss_pred HHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 888878999999999999999999999999999999998743
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.9e-88 Score=896.43 Aligned_cols=591 Identities=23% Similarity=0.409 Sum_probs=493.6
Q ss_pred ccceeEEEeeeEEEEECCc------cc-----------cc-cc---ccccccccccceeeeeecCcEEEEECCCCccHHH
Q 000773 690 FTPLAMSFDSVYYYVDMPP------EM-----------KE-QG---VAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTT 748 (1293)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~------~~-----------~~-~~---~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTT 748 (1293)
.+.+.+.|+|+++..+... .+ .+ .+ .+..++.||+|||+.++|||+++|+|||||||||
T Consensus 127 ~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKST 206 (1470)
T PLN03140 127 LPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTT 206 (1470)
T ss_pred CCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHH
Confidence 3467899999998766211 10 00 01 1123577999999999999999999999999999
Q ss_pred HHHHHhCCCCCC-ceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHH--
Q 000773 749 LMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKE-------VSKEDK-- 818 (1293)
Q Consensus 749 Ll~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~-------~~~~~~-- 818 (1293)
|||+|+|+.++. ..+|+|.+||++..+...++.++||+|+|.+++++||+|||.|++.++.... ...+++
T Consensus 207 LLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~ 286 (1470)
T PLN03140 207 LLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDA 286 (1470)
T ss_pred HHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhc
Confidence 999999986542 3589999999987544446779999999999999999999999987653211 111111
Q ss_pred ----------------------HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 819 ----------------------IIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 819 ----------------------~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
...++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+++||||||+|
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsG 366 (1470)
T PLN03140 287 GIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTG 366 (1470)
T ss_pred cCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcC
Confidence 1235789999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCChhHHHHHHHhCCCCCCCCCC
Q 000773 877 LDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKVIEYYEAIPGVPKIKEK 955 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1293)
||+.++.++++.|+++++ .|+|||+++|||+.++++.||++++|.+ |+++|+||. +++.+||+++ |+ .||++
T Consensus 367 LDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~l-Gf-~cP~~ 439 (1470)
T PLN03140 367 LDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESC-GF-KCPER 439 (1470)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHc-CC-CCCCC
Confidence 999999999999999986 4899999999998889999999999985 899999996 5789999999 55 69999
Q ss_pred CCcccchhhccchHHHh------------hhchhHHHHHhhcHHHHHHHHHHhhhcCCCCCCCCccccccCCchhHHHHH
Q 000773 956 YNPATWMLEVSSAAAEV------------RLGMDFADAYKSSSLCQRNKALVNELSTPPRGAKDLYFATQYSQSTWGQFK 1023 (1293)
Q Consensus 956 ~n~a~~~~~~~~~~~~~------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 1023 (1293)
.|||||++++.+..+.. ....++++.|+.|..+++....++.................|..+++.|++
T Consensus 440 ~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~ 519 (1470)
T PLN03140 440 KGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLK 519 (1470)
T ss_pred CChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHH
Confidence 99999999998754321 113467889999887766544332210000001111122457889999999
Q ss_pred HHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHhhhHH
Q 000773 1024 SCLWKQWWTYWRSPDYNLVRCCFTLACALMIGTVFWKVGTKREDTTDLTMIIGAMYAAILFVGISNCSTVQPVVAVERTV 1103 (1293)
Q Consensus 1024 ~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v 1103 (1293)
.|++|++++++||+.++..|+++.+++|+++|++||+++.+..+..+.+.+.|++||++++.++.++.++ +.++.||+|
T Consensus 520 ~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l-~~~~~~r~v 598 (1470)
T PLN03140 520 ACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAEL-ALMIQRLPV 598 (1470)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccch
Confidence 9999999999999999999999999999999999999987654555566788999999998888776554 677899999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhceeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Q 000773 1104 FYRERAAGMYSALPYAIAQVIVEIPYVLFQTTYYTLIVYAMVSFEWTAAKFWWFFFVTFFSFLYFTYYGMMTVSITPNHQ 1183 (1293)
Q Consensus 1104 ~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1293)
|+|||..++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++|+..
T Consensus 599 f~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~ 678 (1470)
T PLN03140 599 FYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMI 678 (1470)
T ss_pred hHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCcc----hhhhHhhhCHHHHHHHHHHHHhhCCCcccc-cccCCCCCCCHHHHHHhhcCC
Q 000773 1184 VAAIFAAAFYALFNLFSGFFIPRP----WWIWYYWICPVAWTVYGLIVSQYGDVEDSI-SVPGMAQKPTIKAYIEDHFGY 1258 (1293)
Q Consensus 1184 ~a~~~~~~~~~~~~lf~G~~i~~~----~~~w~~~isp~~y~~~~l~~ne~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 1258 (1293)
+|+.+++++++++++|+||++|++ ||+|++|+||++|+++|+++|||.+..+.. .|.+ .+ .+.|+.+++.+|+
T Consensus 679 ~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~-~~-~~~G~~~L~~~g~ 756 (1470)
T PLN03140 679 IANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASD-NS-TRLGTAVLNIFDV 756 (1470)
T ss_pred HHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCC-CC-cccHHHHHHhcCc
Confidence 999999999999999999999986 999999999999999999999997765432 1122 11 2334555578999
Q ss_pred CCC--CchhHHHHHHHHHHHHHHHHHHHHHhccc
Q 000773 1259 EPD--FMGPVAAVLVAFTVFFAFMFAFCIKTLNF 1290 (1293)
Q Consensus 1259 ~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1290 (1293)
..+ |+|+++++|+||+++|+++++++|+++++
T Consensus 757 ~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 757 FTDKNWYWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 754 57999999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-82 Score=781.03 Aligned_cols=564 Identities=25% Similarity=0.474 Sum_probs=496.1
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-ceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
+..+|+|+|+-++|||++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|++|+|.|+|.|||
T Consensus 127 ~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTV 206 (1391)
T KOG0065|consen 127 KIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTV 206 (1391)
T ss_pred cceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEE
Confidence 457999999999999999999999999999999999965432 2357999999988765447889999999999999999
Q ss_pred HHHHHHHHHhcCCCC----CCHHHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 798 KESLIYSAFLRLAKE----VSKEDKII-FVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~----~~~~~~~~-~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+|+|.|+++++.+.. .+++++.+ ..+.+++.+||.+|+|+++|+...||+||||||||++|.+++.+|+++++||
T Consensus 207 reTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De 286 (1391)
T KOG0065|consen 207 RETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDE 286 (1391)
T ss_pred eehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeec
Confidence 999999999988743 23333332 5788999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCChhHHHHHHHhCCCCCC
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKVIEYYEAIPGVPK 951 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~ 951 (1293)
+|+|||+.++.++.+.||++++. +.|++++.|||+.+++++||+|++|.+ |+++|+||. .++.+||+++ |+ .
T Consensus 287 ~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~-Gf-~ 359 (1391)
T KOG0065|consen 287 ITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDM-GF-K 359 (1391)
T ss_pred ccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhc-Cc-c
Confidence 99999999999999999999875 899999999999999999999999996 999999998 4789999998 55 6
Q ss_pred CCCCCCcccchhhccchHHHhh------------hchhHHHHHhhcHHHHHHHHHHhhhcCCCCCCCCccccccCCchhH
Q 000773 952 IKEKYNPATWMLEVSSAAAEVR------------LGMDFADAYKSSSLCQRNKALVNELSTPPRGAKDLYFATQYSQSTW 1019 (1293)
Q Consensus 952 ~~~~~n~a~~~~~~~~~~~~~~------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1293)
||+..++|||+.++++..++.+ ...++.+.|..++.+++....++.........+.......|..++|
T Consensus 360 cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~ 439 (1391)
T KOG0065|consen 360 CPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYW 439 (1391)
T ss_pred CCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHH
Confidence 9999999999999988432211 1257899999999888765444332222222222334457889999
Q ss_pred HHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHh
Q 000773 1020 GQFKSCLWKQWWTYWRSPDYNLVRCCFTLACALMIGTVFWKVGTKREDTTDLTMIIGAMYAAILFVGISNCSTVQPVVAV 1099 (1293)
Q Consensus 1020 ~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~ 1099 (1293)
.|+++|++|.++.+.||..++..++++.+++|+++|++|++.+. .+..+.+.+.|++||++++.++.++.++. ...+
T Consensus 440 ~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~-~~~~ 516 (1391)
T KOG0065|consen 440 EQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIA-LTFQ 516 (1391)
T ss_pred HHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHH-HHHh
Confidence 99999999999999999999999999999999999999999983 46677889999999999999999888874 4557
Q ss_pred hhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhceeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000773 1100 ERTVFYRERAAGMYSALPYAIAQVIVEIPYVLFQTTYYTLIVYAMVSFEWTAAKFWWFFFVTFFSFLYFTYYGMMTVSIT 1179 (1293)
Q Consensus 1100 er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1293)
.||||+|||...+|++++|.++.+++++|+.++.+++|.+|+||++||++++++||.++++++++..|++++++++++++
T Consensus 517 ~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~ 596 (1391)
T KOG0065|consen 517 RLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLS 596 (1391)
T ss_pred hcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhccccCcc----hhhhHhhhCHHHHHHHHHHHHhhCCCccccc--ccCCCC---------
Q 000773 1180 PNHQVAAIFAAAFYALFNLFSGFFIPRP----WWIWYYWICPVAWTVYGLIVSQYGDVEDSIS--VPGMAQ--------- 1244 (1293)
Q Consensus 1180 ~~~~~a~~~~~~~~~~~~lf~G~~i~~~----~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~--~~~~~~--------- 1244 (1293)
++...|+.++++.+++..+++||+||.+ ||+|++|+||+.|++|++++|||++.+.+|. .|++.+
T Consensus 597 ~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~ 676 (1391)
T KOG0065|consen 597 RTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCA 676 (1391)
T ss_pred chHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccch
Confidence 9999999999999999999999999986 9999999999999999999999999998875 122111
Q ss_pred ---------CCCHHHHHHhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000773 1245 ---------KPTIKAYIEDHFGYEPDFMGPVAAVLVAFTVFFAFMFAFCIKTLNFQT 1292 (1293)
Q Consensus 1245 ---------~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1292 (1293)
...+.+|++..|++++.|.|+++||++||.++|.++..+++.|+++.+
T Consensus 677 ~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~ 733 (1391)
T KOG0065|consen 677 ATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLK 733 (1391)
T ss_pred hhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccc
Confidence 012356888888899999999999999999999999999999998643
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-74 Score=709.53 Aligned_cols=547 Identities=28% Similarity=0.478 Sum_probs=457.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
++||+|||||||||||++|+|+.+++..++|+|++||++......++.+|||.|+|.+++++||+|++.|+++++.+.+
T Consensus 58 l~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~- 136 (613)
T KOG0061|consen 58 LLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS- 136 (613)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-
Confidence 5899999999999999999999987667899999999888777788899999999999999999999999999876532
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
+.. .+.++++++++++|||.+|+||+||+...||+||||||||+||..|+
T Consensus 137 ------~~~------------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell 186 (613)
T KOG0061|consen 137 ------LSK------------------------EEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELL 186 (613)
T ss_pred ------CCH------------------------HHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHH
Confidence 111 11245689999999999999999999888999999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHHhC
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFESC 240 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~~~ 240 (1293)
.||+|++|||||||||+.++.++++.|+++|++ |+|||+++|||+.+++++||++++|++|+++|+|+++++.+||+++
T Consensus 187 ~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~ 265 (613)
T KOG0061|consen 187 TDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSL 265 (613)
T ss_pred cCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhC
Confidence 999999999999999999999999999999987 9999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCCc--chhhhhhcCCCCCCCCCHHHHHHHHHhcccchhhHhhccCCCCCCcCcccccccccC
Q 000773 241 GFCCPERKGTADFLQEVTSRK--DQEQYWADRSKPYRYISVTEFANRFKSFHIGMHLENQLSVPFDKSQGHRAAIVFKKY 318 (1293)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (1293)
|++||++.||+||+.++.+.. .+...... ......+.++..+...+............ .......
T Consensus 266 G~~~P~~~Npadf~l~l~s~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 332 (613)
T KOG0061|consen 266 GFPCPELENPADFLLDLLSVDSGTRELEEAV--------RIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGT 332 (613)
T ss_pred CCCCCCcCChHHHHHHHHccCCCchhHHhHH--------HHHHHhhhccccchhhhhHHHHhhhcccc-----ccccccc
Confidence 999999999999999988743 11100000 00000111100000000000000000000 0000111
Q ss_pred CCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhhcccCCCCCcCcchhhhHHHHHHHHHHHHHHHH-HH
Q 000773 319 TVPKMELLKACWDKEWLLIKRNSFVYVSKTVQLIIVAIIASTVFLRTRMHTRNENDGALFIGALLFSMIINMFNGFA-EL 397 (1293)
Q Consensus 319 ~~~~~~~~~~l~~r~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~-~~ 397 (1293)
..+++.|+..+++|.+.+..|++.....+.++.+++++++|.+|++.+...... ..+.|.+++.+....+..+. .+
T Consensus 333 ~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i 409 (613)
T KOG0061|consen 333 SPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAV 409 (613)
T ss_pred CCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHH
Confidence 678999999999999999999999999999999999999999999986554433 24567777777666665555 57
Q ss_pred HHhhhhhhhhHhhhcCCCccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000773 398 AMTIQRFPVFYKQRDLMFHPVWTFTLPTFLLRIPISIFESVVWVVVTYYTIGFAPEASRFFKNFLLVFLIQQMAAAMFRL 477 (1293)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~y~~~~y~la~~l~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~l~~~~~~~~~~~ 477 (1293)
..+.++++++.||+..++|+.++|+++++++++|+.++.+++|+.++|||+|+.++..+|+.+++++++....+.+++.+
T Consensus 410 ~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~ 489 (613)
T KOG0061|consen 410 PVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLF 489 (613)
T ss_pred HHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCcchhhhhhhCHHHHHHHHHHHhhcCCCccccccCC-Ccccccch
Q 000773 478 IAGVCRTMIIANTGGALTLLVVFLLGGFIVPKGQIPNWWEWGYWVSPLAYGYNAFAVNEMYAPRWMNRLAS-DNVTKLGA 556 (1293)
Q Consensus 478 ~~~~~~s~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~al~~ne~~~~~~~~~~~~-~~~~~~g~ 556 (1293)
+++..++...|.+++++..+++++++||+++.+.||.||+|++|+|+.+|++|+++.|||.+....|.... ..+...+.
T Consensus 490 i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~ 569 (613)
T KOG0061|consen 490 ISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGE 569 (613)
T ss_pred HHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999986322222222 34466788
Q ss_pred hhhhccCcccCCcchhHhHHHHHHHHHHHHHHHHHHHHhcC
Q 000773 557 AVLNNFDIPAHRDWYWIGAAALSGFIVLFNVLFTFTLMYLN 597 (1293)
Q Consensus 557 ~~l~~~~~~~~~~~~~~~~~~l~~~~v~f~~~~~~~l~~~~ 597 (1293)
.++...++...+ .|.++.++++++++|++++++.+++..
T Consensus 570 ~~l~~~~~~~~~--~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 570 DVLKQLGFEDSS--FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred HHHHhcCCcccc--cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 888888876644 578899999999999999999988764
No 11
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.7e-73 Score=710.81 Aligned_cols=552 Identities=24% Similarity=0.410 Sum_probs=458.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++.+||+|||.|+++++.+...
T Consensus 53 ~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 132 (617)
T TIGR00955 53 LLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTVREHLMFQAHLRMPRRV 132 (617)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcHHHHHHHHHhcCCCCCC
Confidence 58999999999999999999998875456899999999876555567899999999999999999999999876543210
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCc-ccccccccchhhHHHHHH
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEM-NRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~-~~~LSGGqrqRv~ia~al 159 (1293)
. +. +.++.++++++.+||.+++||.+|++. .++|||||||||+||++|
T Consensus 133 ~-------~~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL 181 (617)
T TIGR00955 133 T-------KK------------------------EKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASEL 181 (617)
T ss_pred C-------HH------------------------HHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHH
Confidence 0 00 112346789999999999999999753 689999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHHh
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFES 239 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~~ 239 (1293)
+.+|++++|||||+|||+.++.++++.|+++++ +|+|+|+++|||+.++++.||++++|++|+++++|+++++.+||++
T Consensus 182 ~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~ 260 (617)
T TIGR00955 182 LTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSD 260 (617)
T ss_pred HcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999986 5899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHhcCCcchhhhhhcCCCCCCCCCHHHHHHHHHhcccchhhHhhccCCCCCCc---Ccccccccc
Q 000773 240 CGFCCPERKGTADFLQEVTSRKDQEQYWADRSKPYRYISVTEFANRFKSFHIGMHLENQLSVPFDKSQ---GHRAAIVFK 316 (1293)
Q Consensus 240 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 316 (1293)
+|+.||++.|++|++.++.+....... ......+++.+.+++++..++............. .........
T Consensus 261 ~g~~~p~~~n~ad~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (617)
T TIGR00955 261 LGHPCPENYNPADFYVQVLAVIPGSEN-------ESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGI 333 (617)
T ss_pred cCCCCCCCCChHHHHHHHhhcCccccc-------chHHHHHHHHHHHhcchhhHHHHHHhhhhhcccccccccccccccc
Confidence 999999999999999998765322110 0011233455555554433332222111110000 000011223
Q ss_pred cCCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhhcccCCCCCcCcchhhhHHHHHHHHHHHHHHH-H
Q 000773 317 KYTVPKMELLKACWDKEWLLIKRNSFVYVSKTVQLIIVAIIASTVFLRTRMHTRNENDGALFIGALLFSMIINMFNGF-A 395 (1293)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~ 395 (1293)
.+..+++.|+..+.+|.++..+||+..+..+.++.+++++++|++|++.+.+.. +...+.|.+|+......+.+. .
T Consensus 334 ~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~---~~~~~~g~lf~~~~~~~f~~~~~ 410 (617)
T TIGR00955 334 GYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQK---GVQNINGALFLFLTNMTFQNVFP 410 (617)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999875432 334456778887776666654 3
Q ss_pred HHHHhhhhhhhhHhhhcCCCccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcCccHHHHHHHHHHHHHHHHHHHHHH
Q 000773 396 ELAMTIQRFPVFYKQRDLMFHPVWTFTLPTFLLRIPISIFESVVWVVVTYYTIGFAPEASRFFKNFLLVFLIQQMAAAMF 475 (1293)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~y~~~~y~la~~l~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~l~~~~~~~~~ 475 (1293)
.+..+..++++++||+..++|++++|+++++++++|+.++.+++|.+++|||+|+.+++.+|+.+++++++...++.+++
T Consensus 411 ~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~ 490 (617)
T TIGR00955 411 VINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFG 490 (617)
T ss_pred HHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCcchhhhhhhCHHHHHHHHHHHhhcCCCcc-ccccCCC--ccc
Q 000773 476 RLIAGVCRTMIIANTGGALTLLVVFLLGGFIVPKGQIPNWWEWGYWVSPLAYGYNAFAVNEMYAPRW-MNRLASD--NVT 552 (1293)
Q Consensus 476 ~~~~~~~~s~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~al~~ne~~~~~~-~~~~~~~--~~~ 552 (1293)
++++++++++..|..++++..+++++++||+++.++||+||+|++|+||++|++++++.|||.+..+ .|..... .+.
T Consensus 491 ~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~ 570 (617)
T TIGR00955 491 YLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCP 570 (617)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988775 3322111 123
Q ss_pred ccchhhhhccCcccCCcchhHhHHHHHHHHHHHHHHHHHHHHhc
Q 000773 553 KLGAAVLNNFDIPAHRDWYWIGAAALSGFIVLFNVLFTFTLMYL 596 (1293)
Q Consensus 553 ~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~v~f~~~~~~~l~~~ 596 (1293)
..|..++..+++... ++|.++++++++.++|++++++++++.
T Consensus 571 ~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 571 SSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred cChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468889999988764 458899999999999999999998764
No 12
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8.6e-72 Score=694.78 Aligned_cols=548 Identities=22% Similarity=0.357 Sum_probs=433.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+|||||||||||++|+|+.+|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+..
T Consensus 96 ~~aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~- 172 (659)
T PLN03211 96 ILAVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS- 172 (659)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-
Confidence 47999999999999999999998864 3589999999887543 34568999999999999999999999876432110
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
..+. +.++.++++++.+||++++||.+|+...++|||||||||+||++|+
T Consensus 173 ------~~~~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~ 222 (659)
T PLN03211 173 ------LTKQ------------------------EKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEML 222 (659)
T ss_pred ------CCHH------------------------HHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHH
Confidence 0000 0123467789999999999999999889999999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHHhC
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFESC 240 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~~~ 240 (1293)
.+|++++|||||+|||+.++.++++.|+++++ +|+|+|+++|||+.++.+.||++++|++|++++.|+.+++.+||+++
T Consensus 223 ~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~ 301 (659)
T PLN03211 223 INPSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESV 301 (659)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHC
Confidence 99999999999999999999999999999986 58999999999988899999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCCcchhhhhhcCCCCCCCCCHHHHHHHHHhcccchhhHhhccC---CC--CCC---cCcccc
Q 000773 241 GFCCPERKGTADFLQEVTSRKDQEQYWADRSKPYRYISVTEFANRFKSFHIGMHLENQLSV---PF--DKS---QGHRAA 312 (1293)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~---~~--~~~---~~~~~~ 312 (1293)
||+||++.||+||+.++.+.............+ ...+...+.|++... ......... .. .+. ......
T Consensus 302 G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (659)
T PLN03211 302 GFSPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEH 377 (659)
T ss_pred CCCCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhccccccc
Confidence 999999999999999998754321000000000 011223334432110 000000000 00 000 000000
Q ss_pred -cccccCCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhhcccCCCCCcCcchhhhHHHHHHHHHHHH
Q 000773 313 -IVFKKYTVPKMELLKACWDKEWLLIKRNSFVYVSKTVQLIIVAIIASTVFLRTRMHTRNENDGALFIGALLFSMIINMF 391 (1293)
Q Consensus 313 -~~~~~~~~~~~~~~~~l~~r~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 391 (1293)
.....+..+++.|+..+++|.++. +|++.....++++.+++|+++|++|++.+ ..+.+.+.|.+||.+++..+
T Consensus 378 ~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~ 451 (659)
T PLN03211 378 RSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGV 451 (659)
T ss_pred ccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHH
Confidence 001124467999999999999988 78888888999999999999999999874 12345667888888766554
Q ss_pred -HHHHHHHHhhhhhhhhHhhhcCCCccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcCccHHHHHHHHHHHHHHHHH
Q 000773 392 -NGFAELAMTIQRFPVFYKQRDLMFHPVWTFTLPTFLLRIPISIFESVVWVVVTYYTIGFAPEASRFFKNFLLVFLIQQM 470 (1293)
Q Consensus 392 -~~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~la~~l~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~l~~~~ 470 (1293)
..+..+..+..++++++|||..++|++++|++|++++++|+.++.+++|++++|||+|+.+++.+|+.|+++++++..+
T Consensus 452 ~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~ 531 (659)
T PLN03211 452 FPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLV 531 (659)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHH
Confidence 4556777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCcchhhhhhhCHHHHHHHHHHHhhcCCCcc-----ccc
Q 000773 471 AAAMFRLIAGVCRTMIIANTGGALTLLVVFLLGGFIVPKGQIPNWWEWGYWVSPLAYGYNAFAVNEMYAPRW-----MNR 545 (1293)
Q Consensus 471 ~~~~~~~~~~~~~s~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~al~~ne~~~~~~-----~~~ 545 (1293)
+.+++.+++++++++..|+.++++..+++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+. .|.
T Consensus 532 ~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~ 609 (659)
T PLN03211 532 SQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCS 609 (659)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCC
Confidence 99999999999999999999999999999999999997 79999999999999999999999999976542 232
Q ss_pred cCCCcccccchhhhhccCcccCCcchhHhHHHHHHHHHHHHHHHHHHHHhcC
Q 000773 546 LASDNVTKLGAAVLNNFDIPAHRDWYWIGAAALSGFIVLFNVLFTFTLMYLN 597 (1293)
Q Consensus 546 ~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~v~f~~~~~~~l~~~~ 597 (1293)
... +....++.++....+. ....|.++.++++++++|+++.++.++..+
T Consensus 610 ~~~-~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 610 LPH-GSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred Ccc-cCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111 0001112223222222 234688889999999999999999887543
No 13
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-71 Score=703.01 Aligned_cols=740 Identities=21% Similarity=0.303 Sum_probs=440.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
++||+||.||||||||.+|.|+++.. +|+|.++| .++||||++|++.. ||||||.||.... .++
T Consensus 549 lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~ng-TvreNILFG~~~d--~~r 612 (1381)
T KOG0054|consen 549 LVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQNG-TVRENILFGSPYD--EER 612 (1381)
T ss_pred EEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhhCC-cHHHhhhcCcccc--HHH
Confidence 47999999999999999999999865 99999998 48999999998865 9999999998764 478
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
|+.+.+.|.+++|.+.+|.+| .|.||+ ++.+||||||||++||||++
T Consensus 613 Y~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGE-rGinLSGGQKqRIsLARAVY 659 (1381)
T KOG0054|consen 613 YDKVIKACALKKDLEILPFGD--------------------------------LTEIGE-RGINLSGGQKQRISLARAVY 659 (1381)
T ss_pred HHHHHHHccCHhHHhhcCCCC--------------------------------cceecC-CccCCcHhHHHHHHHHHHHh
Confidence 999999999998887777665 588995 56679999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHH-HHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH---H
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVK-CLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE---F 236 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~-~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~---~ 236 (1293)
+++||++||+|+|++|++++.++++ +++.+. +++|+|+++|| -+..+.+|.|++|++|+|...|+++|+.+ .
T Consensus 660 ~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILVTHq--l~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~ 735 (1381)
T KOG0054|consen 660 QDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILVTHQ--LQFLPHADQIIVLKDGKIVESGTYEELLKSGGD 735 (1381)
T ss_pred ccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEEeCc--hhhhhhCCEEEEecCCeEecccCHHHHHhcchh
Confidence 9999999999999999999999995 786664 47899999886 46889999999999999999999999974 2
Q ss_pred HHhCCCCCCCCCChhhHHHHhcCCcchhhhhhcCCCCCCCCCHHHHHHHHHhcccchhh-------HhhccCCCCCCcCc
Q 000773 237 FESCGFCCPERKGTADFLQEVTSRKDQEQYWADRSKPYRYISVTEFANRFKSFHIGMHL-------ENQLSVPFDKSQGH 309 (1293)
Q Consensus 237 f~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~ 309 (1293)
|+++......... .+ ..... ...+......+. +..+..+...+. .......++...+.
T Consensus 736 ~~~l~~~~~~~~~-~~-----~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~ 800 (1381)
T KOG0054|consen 736 FAELAHEEESEQE-EE-----ASEKD-------LESGESSRESES--RSLESLSSEEEKSKDEKEEEDKLVQEEERETGK 800 (1381)
T ss_pred HHHHhhccchhhc-cc-----ccccc-------ccccccccchhh--hhhhhhcccccccccccchhhHHHHHHHHhcCE
Confidence 3322000000000 00 00000 000000000000 000000000000 00000000000011
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHHHHhc-ChhHHHH---HHHHHHHHHHHHHHhhhcccCCCC--Cc---CcchhhhH
Q 000773 310 RAAIVFKKYTVPKMELLKACWDKEWLLIKR-NSFVYVS---KTVQLIIVAIIASTVFLRTRMHTR--NE---NDGALFIG 380 (1293)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~R-~~~~~~~---~~~~~~~~~l~~g~~f~~~~~~~~--~~---~~~~~~~g 380 (1293)
. -|.-.+.+... ..+.... ..........+...+|+....+.. .. .+...+.+
T Consensus 801 v------------------~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~ 862 (1381)
T KOG0054|consen 801 V------------------SWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLG 862 (1381)
T ss_pred e------------------eHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHH
Confidence 1 11111111111 1111111 111111122223333333222111 01 11122211
Q ss_pred HHHH----HHHHHHHHHHH-------------------------------HHHHhhhhhhhhHhhhcCCCccchhHHHHH
Q 000773 381 ALLF----SMIINMFNGFA-------------------------------ELAMTIQRFPVFYKQRDLMFHPVWTFTLPT 425 (1293)
Q Consensus 381 ~l~~----~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~y~~~~y~la~ 425 (1293)
...+ ..+.....++. +.+..++++.......|..+.....+++..
T Consensus 863 vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~ 942 (1381)
T KOG0054|consen 863 VYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQS 942 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHH
Confidence 1110 11111111110 111122222222222222221111111111
Q ss_pred HHHHhhHHHHHHHHHhhhhhhccCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhccc
Q 000773 426 FLLRIPISIFESVVWVVVTYYTIGFAPEASRFFKNFLLVFLIQQMAAAMFRLIAGVCRTMIIANTGGALTLLVVFLLGGF 505 (1293)
Q Consensus 426 ~l~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~l~~~~~~~~~~~~~~~~~s~~~a~~~~~~~~~~~~l~~G~ 505 (1293)
++.-+ . +..++.|...-+.--+..++..+..+...+..++.-...+.+++++|+++|+..++.++.++...|-
T Consensus 943 ~~~~l-----~--~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~ 1015 (1381)
T KOG0054|consen 943 LLNVL-----G--ILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGK 1015 (1381)
T ss_pred HHHHH-----H--HHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccc
Confidence 11100 0 0111111110000001111222222223334455556677899999999999999998777632221
Q ss_pred ccCCCCCCcchhhhhhhCHHHHHHHHHHHhhcCCCccccccCCCcccccchhhhhccCcccCCcchhHhHHHHHHHHHHH
Q 000773 506 IVPKGQIPNWWEWGYWVSPLAYGYNAFAVNEMYAPRWMNRLASDNVTKLGAAVLNNFDIPAHRDWYWIGAAALSGFIVLF 585 (1293)
Q Consensus 506 ~i~~~~ip~~~~w~~~isp~~y~~~al~~ne~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~v~f 585 (1293)
.+....++. .......-..|.+...++|+.+++..++.+++++
T Consensus 1016 -----------------------------~~rf~~~~~--------~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~ 1058 (1381)
T KOG0054|consen 1016 -----------------------------EERFIQEND--------ELIDENSRAFFLSISANRWLAVRLELLGNLVVLI 1058 (1381)
T ss_pred -----------------------------cHHHHHHHH--------HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110000000 0111112223344556789999999999888877
Q ss_pred HHHHHHHHHhc-CCCCCCCccchHhHHHHHHHhh---hhccccccccCCCCcCCCCCCCCCCCCcCchhHHHHHhhcCCC
Q 000773 586 NVLFTFTLMYL-NPPGKPQAVLSEEAAAEMVAEQ---EESKEEPRLVRPQSKKDSYPRSLSSSDANNSREMAIRRMCSRS 661 (1293)
Q Consensus 586 ~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1293)
..+..+...-. ..++..+...++...-.....- ..+..| ....+++|+....
T Consensus 1059 ~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elE------------------------n~m~SVERv~eY~ 1114 (1381)
T KOG0054|consen 1059 AALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELE------------------------NNMVSVERVLEYT 1114 (1381)
T ss_pred HHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------hcchhhhHHHHHh
Confidence 76666655443 3355566666655321110000 000000 0011233333222
Q ss_pred C-CCCCCCCCCchhhhhcCCCCCCCccccccceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEEC
Q 000773 662 N-PNELSRNDDSNLEAAKGVAPKRGMVLPFTPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMG 740 (1293)
Q Consensus 662 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G 740 (1293)
+ |+| .+...+... .+..||+.| .++|+|++.+... +...+|||||++|+|||.+||+|
T Consensus 1115 ~~~~E-~p~~~~~~~-pp~~WP~~G--------~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVG 1173 (1381)
T KOG0054|consen 1115 DIPSE-APLEIEESR-PPPSWPSKG--------EIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVG 1173 (1381)
T ss_pred cCCCC-CCCCCcCCC-CCCCCCCCC--------eEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeC
Confidence 2 333 111111111 466788888 4799998765532 33569999999999999999999
Q ss_pred CCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHH
Q 000773 741 VSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKED 817 (1293)
Q Consensus 741 ~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~ 817 (1293)
++|||||||+++|.+...+ .+|+|.|||.++.+ ..+|++++.+||||.+|.. |+|.||.-. ...++++
T Consensus 1174 RTGaGKSSL~~aLFRl~e~--~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NLDPf------~e~sD~~ 1244 (1381)
T KOG0054|consen 1174 RTGAGKSSLILALFRLVEP--AEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNLDPF------DEYSDDE 1244 (1381)
T ss_pred CCCCCHHHHHHHHHHhcCc--cCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC-ccccccCcc------cccCHHH
Confidence 9999999999999997763 57999999998765 4578889999999999865 999998632 1222322
Q ss_pred HHHHHHHHHHHcCCcccc-------cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 000773 818 KIIFVEEVMDLVELESLK-------DAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 890 (1293)
Q Consensus 818 ~~~~~~~~l~~l~l~~~~-------~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~ 890 (1293)
+.++++..+|.+.- |..+. ++..++|-||||.+|+||||+++++||+|||+|+++|++|...|+++||
T Consensus 1245 ----IW~ALe~~~Lk~~v~~~p~~Ld~~v~-egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR 1319 (1381)
T KOG0054|consen 1245 ----IWEALERCQLKDVVSSLPGGLDSEVS-EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIR 1319 (1381)
T ss_pred ----HHHHHHHhChHHHHhhCCcCCCceec-CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHH
Confidence 46667766665433 33333 3456899999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 891 NTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 891 ~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+..+ ++|||++.|+.+ ....+|||+||++ |+++++|+|.
T Consensus 1320 ~~F~-dcTVltIAHRl~--TVmd~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1320 EEFK-DCTVLTIAHRLN--TVMDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred HHhc-CCeEEEEeeccc--hhhhcCeEEEeeC-CeEeecCChH
Confidence 9764 799999999976 5667999999986 9999999874
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.4e-67 Score=695.73 Aligned_cols=222 Identities=25% Similarity=0.395 Sum_probs=187.9
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+..+|++..... +++.+|+|||+.|++||++||+||||||||||+|+|+|...+ .+|+|.++|.+..
T Consensus 1938 L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i~ 2004 (2272)
T TIGR01257 1938 LRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSIL 2004 (2272)
T ss_pred EEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 567777654310 125699999999999999999999999999999999998763 4899999998864
Q ss_pred h--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000773 775 Q--ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 775 ~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 852 (1293)
. ...++.+|||||++.+++.+||+|++.+.+.++. .+.++.++.++++++.+||.+.+|+.++ +||||||
T Consensus 2005 ~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGqK 2076 (2272)
T TIGR01257 2005 TNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGNK 2076 (2272)
T ss_pred chHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHHH
Confidence 2 2245679999999999999999999998776543 2334444567899999999998888876 6999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||+||+||+.+|+||+|||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|.+ |++++.|++
T Consensus 2077 qRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs~ 2154 (2272)
T TIGR01257 2077 RKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGTI 2154 (2272)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999999999999999999878999999999975 67788999999985 899999986
Q ss_pred CCChhHHHHHH
Q 000773 933 GRNSHKVIEYY 943 (1293)
Q Consensus 933 ~~~~~~~~~~~ 943 (1293)
+++...|
T Consensus 2155 ----q~Lk~~~ 2161 (2272)
T TIGR01257 2155 ----QHLKSKF 2161 (2272)
T ss_pred ----HHHHHHh
Confidence 3454444
No 15
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-67 Score=652.63 Aligned_cols=215 Identities=29% Similarity=0.451 Sum_probs=181.9
Q ss_pred ceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCc
Q 000773 692 PLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGF 771 (1293)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~ 771 (1293)
.-+++++||++.++..| +.+||+|+|+++++|+.+||+|||||||||.+.+|-+..+ +..|.|.+||.
T Consensus 985 ~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G~V~IDg~ 1052 (1228)
T KOG0055|consen 985 KGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAGKVKIDGV 1052 (1228)
T ss_pred eeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCc
Confidence 44689999999887654 4679999999999999999999999999999999998765 45899999999
Q ss_pred cCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-------cCCcccccccccC
Q 000773 772 PKKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDL-------VELESLKDAIVGL 841 (1293)
Q Consensus 772 ~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-------l~l~~~~~~~~~~ 841 (1293)
+++. ..+|+++|.|.|+|.||. -|++||+.|+ . . ..+.++ +.++++. .+|.+-.||.+|+
T Consensus 1053 dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG-~---~-~vs~~e----Ii~Aak~ANaH~FI~sLP~GyDT~vGe 1122 (1228)
T KOG0055|consen 1053 DIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYG-S---E-EVSEEE----IIEAAKLANAHNFISSLPQGYDTRVGE 1122 (1228)
T ss_pred ccccCCHHHHHHhcceeccCchhhc-ccHHHHHhcc-C---C-CCCHHH----HHHHHHHhhhHHHHhcCcCcccCccCc
Confidence 8765 346788999999999985 5999999987 1 1 134433 2333333 3566778999996
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
.+ .+||||||||++||||+++||+||||||.||.||+++.+.|++.|.+.. .|+|.|++.|+++ ..+.+|.|.+++
T Consensus 1123 rG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TIqnaD~I~Vi~ 1198 (1228)
T KOG0055|consen 1123 RG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TIQNADVIAVLK 1198 (1228)
T ss_pred cc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hhhcCCEEEEEE
Confidence 54 4899999999999999999999999999999999999999999999864 5899999999975 678899999998
Q ss_pred cCcEEEEeCCCC
Q 000773 922 RGGQVIYSGPLG 933 (1293)
Q Consensus 922 ~~G~~~~~g~~~ 933 (1293)
+ |+|++.|+.+
T Consensus 1199 ~-G~VvE~GtH~ 1209 (1228)
T KOG0055|consen 1199 N-GKVVEQGTHD 1209 (1228)
T ss_pred C-CEEEecccHH
Confidence 5 9999999853
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.5e-63 Score=668.81 Aligned_cols=211 Identities=23% Similarity=0.316 Sum_probs=175.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++|+|++++.+. +.+.+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEec
Confidence 5899999877631 224699999999999999999999999999999999998763 479999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
.+ ..+|+.+++|||++.+++. |+||||.+.. ..++++ +.++++..++.+ -.|+.++. +
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~tdee----i~~Al~~a~l~~~I~~lp~GLdt~Vge-~ 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHNDAD----LWESLERAHLKDVIRRNSLGLDAEVSE-A 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCCHHH----HHHHHHHcCcHHHHHhCccccCccccC-C
Confidence 54 4567889999999999976 9999997531 223332 566677666643 34566664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 4899999999864 5677999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|++++.|+++
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 9999999874
No 17
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-63 Score=578.64 Aligned_cols=203 Identities=27% Similarity=0.375 Sum_probs=171.2
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC--Ch---hcccceEEEEccCC--CC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK--KQ---ETFARISGYCEQND--IH 791 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~--~~---~~~~~~~~~v~q~~--~~ 791 (1293)
...+++||||++++||++||+|+||||||||.++|+|..++ ..|.|.++|.+. +. ...++.+-+++|++ .+
T Consensus 303 ~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SL 380 (539)
T COG1123 303 EVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSL 380 (539)
T ss_pred ceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCccccc
Confidence 35689999999999999999999999999999999998774 579999999762 11 12345566677765 68
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
.|.+||++++.-........ ...++.+++.++++.+||.. ..+++.. +||||||||++|||||+.+|++|++
T Consensus 381 nPr~tV~~~i~epL~~~~~~--~~~~~~~rv~~ll~~VgL~~~~l~ryP~-----elSGGQrQRvaIARALa~~P~lli~ 453 (539)
T COG1123 381 NPRMTVGDILAEPLRIHGGG--SGAERRARVAELLELVGLPPEFLDRYPH-----ELSGGQRQRVAIARALALEPKLLIL 453 (539)
T ss_pred CccccHHHHHHhHHhhhccc--chHHHHHHHHHHHHHcCCCHHHHhcCch-----hcCcchhHHHHHHHHHhcCCCEEEe
Confidence 89999999998765443322 24556678999999999986 5666644 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||.||+..+.++.++|+++.++ |.|.|++|||.+ -+...|||+++|.+ |+++..||.
T Consensus 454 DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 454 DEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred cCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 9999999999999999999999876 999999999975 46678999999985 999999975
No 18
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6e-62 Score=658.05 Aligned_cols=211 Identities=22% Similarity=0.320 Sum_probs=175.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++|+|++++.+. +.+.+|+|+|++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEEh
Confidence 4899999887631 224699999999999999999999999999999999998763 579999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
.+ ..+++.++||||++.+++. |+||||.+. ...++++ +.++++..++.+. .|+.++. +
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~------~~~sdee----i~~al~~a~l~~~I~~lp~GLdt~v~e-~ 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPF------SEHNDAD----LWEALERAHIKDVIDRNPFGLDAEVSE-G 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCC------CCCCHHH----HHHHHHHcCCHHHHHhCcCCCCceecC-C
Confidence 54 4567889999999999975 999999642 1223332 5667777766542 3556664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRL--NTIIDCDKILVLSS- 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCH--HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 489999999986 46677999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|++++.|+++
T Consensus 1445 G~ivE~Gt~~ 1454 (1495)
T PLN03232 1445 GQVLEYDSPQ 1454 (1495)
T ss_pred CEEEEECCHH
Confidence 9999999863
No 19
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-62 Score=599.22 Aligned_cols=208 Identities=21% Similarity=0.361 Sum_probs=171.1
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCC---CCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQND---IHS 792 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~ 792 (1293)
+.+|+|+||++++||++||+||||||||||+|+|+|..++ +.+|+|.++|.++.. ...++.++|++|++ .++
T Consensus 275 ~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 353 (506)
T PRK13549 275 IKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIV 353 (506)
T ss_pred cccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCc
Confidence 4589999999999999999999999999999999997642 147999999987532 12245689999995 478
Q ss_pred CCCCHHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 793 PQVTVKESLIYSAFLRLAK--EVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
+.+||.||+.+........ ....++..++++++++.+++. +..++.++ .|||||||||+||+||+.+|++|+
T Consensus 354 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrv~lA~al~~~p~lll 428 (506)
T PRK13549 354 PVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIA-----RLSGGNQQKAVLAKCLLLNPKILI 428 (506)
T ss_pred CCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccc-----cCCHHHHHHHHHHHHHhhCCCEEE
Confidence 8999999998753211110 012233345678999999996 56677665 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRN 935 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~ 935 (1293)
|||||+|||+.++..+.++|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|+.++.
T Consensus 429 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 492 (506)
T PRK13549 429 LDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHNL 492 (506)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccccC
Confidence 99999999999999999999999888999999999975 57788999999985 899998887643
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.2e-61 Score=648.49 Aligned_cols=211 Identities=21% Similarity=0.293 Sum_probs=176.2
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++|+|++++.+. +...+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCEEc
Confidence 5899999887642 123599999999999999999999999999999999998763 479999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
++ ..+++.+++|||++.+|+. |+||||... ...++++ +.++++..++.+ -.|+.++. +
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~------~~~sdee----i~~al~~a~l~~~I~~lp~GLdt~v~e-~ 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPF------SQYSDEE----VWWALELAHLKTFVSALPDKLDHECAE-G 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCcc------cCCCHHH----HHHHHHHcCcHHHHhhCccCCCceecC-C
Confidence 54 4567889999999999986 999999631 1233333 566777777653 34666664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl--~ti~~~DrIlVld~- 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRL--NTIMDYTRVIVLDK- 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCH--HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 489999999986 46778999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|++++.|+++
T Consensus 1495 G~IvE~G~~~ 1504 (1522)
T TIGR00957 1495 GEVAEFGAPS 1504 (1522)
T ss_pred CEEEEECCHH
Confidence 9999999864
No 21
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=9.8e-62 Score=596.29 Aligned_cols=204 Identities=21% Similarity=0.351 Sum_probs=169.8
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCC---CCCCC
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQND---IHSPQ 794 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~~ 794 (1293)
+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++ .+++.
T Consensus 267 ~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 344 (501)
T PRK10762 267 GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLG 344 (501)
T ss_pred CcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCC
Confidence 79999999999999999999999999999999998763 47999999977532 12345699999996 57889
Q ss_pred CCHHHHHHHHHHhcCC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 795 VTVKESLIYSAFLRLA---KEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+||.||+.+....... .....++..+.++++++.+|+. +..++.++ .|||||||||+||+||+.+|++|+|
T Consensus 345 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGekqrv~lA~al~~~p~lllL 419 (501)
T PRK10762 345 MSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIG-----LLSGGNQQKVAIARGLMTRPKVLIL 419 (501)
T ss_pred CcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999874321110 0112233345678999999995 56777665 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|+.++
T Consensus 420 DEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 420 DEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 9999999999999999999999878999999999975 57788999999985 89999888754
No 22
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-61 Score=605.58 Aligned_cols=226 Identities=19% Similarity=0.225 Sum_probs=180.3
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++........ .....+.+.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 314 L~~~~l~~~y~~~~~~--~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~ 389 (623)
T PRK10261 314 LQVRNLVTRFPLRSGL--LNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRID 389 (623)
T ss_pred EEEeeeEEEEcCCCcc--ccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECC
Confidence 6778887655311000 00000124699999999999999999999999999999999998763 4799999998653
Q ss_pred h------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000773 775 Q------ETFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVT 845 (1293)
Q Consensus 775 ~------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 845 (1293)
. ..+++.++|++|++ .+++.+||.|++.+....+. ....++..+++.++++.+||. +..++.++
T Consensus 390 ~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~----- 462 (623)
T PRK10261 390 TLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYPH----- 462 (623)
T ss_pred cCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCcc-----
Confidence 2 12356799999997 58899999999987643321 112334445688999999995 56666654
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
+|||||||||+|||||+.+|++|||||||+|||+.++..++++|++++++ |.|||++||+++ .+...+|++++|.+ |
T Consensus 463 ~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G 540 (623)
T PRK10261 463 EFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-G 540 (623)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999975 56778999999985 8
Q ss_pred EEEEeCCCC
Q 000773 925 QVIYSGPLG 933 (1293)
Q Consensus 925 ~~~~~g~~~ 933 (1293)
++++.|+.+
T Consensus 541 ~iv~~g~~~ 549 (623)
T PRK10261 541 QIVEIGPRR 549 (623)
T ss_pred EEEEecCHH
Confidence 999999864
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-61 Score=595.61 Aligned_cols=202 Identities=20% Similarity=0.344 Sum_probs=167.9
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccC---CCCCCC
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQN---DIHSPQ 794 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~---~~~~~~ 794 (1293)
+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|+ ..+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 355 (510)
T PRK09700 278 KVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPN 355 (510)
T ss_pred cccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCC
Confidence 89999999999999999999999999999999998653 47999999987532 1234568999998 468889
Q ss_pred CCHHHHHHHHHHhc---CC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 795 VTVKESLIYSAFLR---LA---KEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 795 lTv~e~l~~~~~~~---~~---~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+||+||+.+....+ .. .....++....++++++.+|+. +..++.++ .|||||||||+|||+|+.+|++
T Consensus 356 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~lAral~~~p~l 430 (510)
T PRK09700 356 FSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNIT-----ELSGGNQQKVLISKWLCCCPEV 430 (510)
T ss_pred CcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccc-----cCChHHHHHHHHHHHHhcCCCE
Confidence 99999998653211 00 0011222234578999999996 67777765 6999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||||+|||+.++..+++.|++++++|+|||++||+++ .+...+|++++|.+ |+++..++.
T Consensus 431 LlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 431 IIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred EEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 9999999999999999999999999878999999999975 57788999999985 899888765
No 24
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.2e-61 Score=590.70 Aligned_cols=204 Identities=20% Similarity=0.246 Sum_probs=167.3
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCC---CCCCC
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQND---IHSPQ 794 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 794 (1293)
+|+|||+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|++ .+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~ 355 (510)
T PRK15439 278 GFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLD 355 (510)
T ss_pred CccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCC
Confidence 59999999999999999999999999999999998653 479999999865321 1235689999984 47889
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
+|+.||+......+........+..+.++++++.+|+. +..++.++ .|||||||||+||+||+.+|++||||||
T Consensus 356 ~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrl~la~al~~~p~lLlLDEP 430 (510)
T PRK15439 356 APLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAAR-----TLSGGNQQKVLIAKCLEASPQLLIVDEP 430 (510)
T ss_pred CcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCccc-----cCCcHHHHHHHHHHHHhhCCCEEEECCC
Confidence 99999986421111110011222234578999999997 66777655 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
|+|||+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|.+ |+++..|.++.
T Consensus 431 t~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 431 TRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred CcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 9999999999999999999888999999999986 57788999999974 89998887654
No 25
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.6e-61 Score=594.24 Aligned_cols=202 Identities=23% Similarity=0.317 Sum_probs=169.0
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCC--CC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQND--IH 791 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~--~~ 791 (1293)
+.+|+||||++++||++||+||||||||||+|+|+|..+ .+|+|.++|.++... .+++.+||++|++ .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999763 379999999865321 1245689999997 47
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
++.+||.||+.+....+.. .....+..++++++++.+|+. +..++.++ +|||||||||+||+||+.+|++|+|
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYPA-----EFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCCc-----cCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 8899999999886432211 122333445678999999997 45666654 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||||+|||+.++..+++.|++++++ |+|||++||+++ .+.+.+|++++|.+ |+++..|+.
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999999999999865 899999999975 56778999999985 899998875
No 26
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=9e-61 Score=591.05 Aligned_cols=200 Identities=23% Similarity=0.359 Sum_probs=166.2
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEc-Ccc---CCh------hcccceEEEEccCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRIS-GFP---KKQ------ETFARISGYCEQND 789 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~-g~~---~~~------~~~~~~~~~v~q~~ 789 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++ |.+ ... ...++.+||++|++
T Consensus 297 ~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~ 374 (520)
T TIGR03269 297 VKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEY 374 (520)
T ss_pred ceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCccccccccchhhHHHHhhhEEEEccCc
Confidence 4699999999999999999999999999999999998653 47999996 532 111 12245689999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-----LKDAIVGLPGVTGLSIEQRKRLTIAVELVAN 864 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-----~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~ 864 (1293)
.+++.+||+||+.+...+. ...++...+++++++.+|+.+ ..++.++ +|||||||||+||+||+.+
T Consensus 375 ~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----~LSgGq~qrv~laral~~~ 445 (520)
T TIGR03269 375 DLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYPD-----ELSEGERHRVALAQVLIKE 445 (520)
T ss_pred ccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCChh-----hCCHHHHHHHHHHHHHhcC
Confidence 9999999999998753221 122333456788999999975 3455544 7999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 865 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 865 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|++|+|||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.+|++++|.+ |+++..|++
T Consensus 446 p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 446 PRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGDP 512 (520)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999999765 899999999975 57778999999975 899988875
No 27
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.4e-59 Score=633.60 Aligned_cols=210 Identities=21% Similarity=0.309 Sum_probs=175.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++|+||+++.+. +.+.+|+||||+|+|||.+||+|+||||||||+++|.|..+ .+|+|.+||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 5899999987642 23569999999999999999999999999999999999864 379999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
.. ..+++.++||||++.+|+. |+||||... ...+++ .+.++++..++.+. .|+.++. +
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~------~~~tde----ei~~aL~~~~L~~~i~~lp~GLdt~v~e-~ 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPY------EQWSDE----EIWKVAEEVGLKSVIEQFPDKLDFVLVD-G 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCcc------cCCCHH----HHHHHHHHCCCHHHHHhCcccccccccc-C
Confidence 54 4567889999999999975 999999532 122332 35678888877542 4566664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl--~ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRV--EALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCH--HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 479999999986 46678999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|+++..|++.
T Consensus 1427 G~ivE~g~p~ 1436 (1490)
T TIGR01271 1427 SSVKQYDSIQ 1436 (1490)
T ss_pred CEEEEeCCHH
Confidence 8999999863
No 28
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.3e-59 Score=628.13 Aligned_cols=216 Identities=20% Similarity=0.330 Sum_probs=176.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-------------
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG------------- 760 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~------------- 760 (1293)
.++|+||++..+.. +++++|+|+||+++||+.+||+||||||||||+++|.|..++.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 58999999876421 1346999999999999999999999999999999999976541
Q ss_pred ---------------------------------------ceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHH
Q 000773 761 ---------------------------------------YIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVTVK 798 (1293)
Q Consensus 761 ---------------------------------------~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~ 798 (1293)
+.+|+|.+||.++.+ ..+++.+|||+|++.+| ..|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHH
Confidence 147999999998754 45678899999999998 57999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 799 ESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-------SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 799 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-------~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
|||.++. ...+.++ ++++++..++. +-.|+.+|. +..+||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~-----~~at~ee----I~~A~k~A~l~~fI~~LP~GydT~VGe-~G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK-----EDATRED----VKRACKFAAIDEFIESLPNKYDTNVGP-YGKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC-----CCCCHHH----HHHHHHHcCCHHHHHhCccccCCccCC-CCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9998751 1233333 45666665543 345788884 34579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHHhHhheeecC---cE-EEEeCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRG---GQ-VIYSGPL 932 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~---G~-~~~~g~~ 932 (1293)
||||+||+.+.+.|++.|+++. .+++|+|+++|++ +..+.+|+|++|+++ |+ +++.|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 3589999999986 467889999999862 67 5578885
No 29
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.6e-60 Score=584.62 Aligned_cols=206 Identities=18% Similarity=0.336 Sum_probs=169.6
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCC---CCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQND---IHS 792 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~ 792 (1293)
+.+|+|+||++++||+++|+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .++
T Consensus 273 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~ 351 (500)
T TIGR02633 273 RKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIV 351 (500)
T ss_pred ccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcC
Confidence 4589999999999999999999999999999999998652 147999999987632 12345689999995 588
Q ss_pred CCCCHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 793 PQVTVKESLIYSAFLRLA--KEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
+.+||+||+.+...-... ......+....++++++.+++.+ ..++.++ .|||||||||+||++|+.+|++|+
T Consensus 352 ~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGqkqrv~la~al~~~p~lll 426 (500)
T TIGR02633 352 PILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIG-----RLSGGNQQKAVLAKMLLTNPRVLI 426 (500)
T ss_pred CCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccc-----cCCHHHHHHHHHHHHHhhCCCEEE
Confidence 999999999875321110 01122333456789999999964 5676655 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||||+|||+.++..+++.|++++++|.|||++||+++ ++.+.+|++++|.+ |+++..++.+
T Consensus 427 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 427 LDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999999999999888999999999975 57788999999975 8888877653
No 30
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-60 Score=583.34 Aligned_cols=205 Identities=17% Similarity=0.305 Sum_probs=170.3
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCC---CCCC
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQND---IHSP 793 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~ 793 (1293)
.+++|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|++... ...++.++|++|++ .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 48999999999999999999999999999999999865 357999999986532 12345689999986 4889
Q ss_pred CCCHHHHHHHHHHhcCCC-C--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 794 QVTVKESLIYSAFLRLAK-E--VSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~-~--~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
.+|+.||+.+........ . ....+..+.++++++.+++. +..++.++ .|||||||||+||++|+.+|++||
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEE
Confidence 999999997643211100 0 11222334578899999994 66777765 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
|||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.+|++++|.+ |++++.|+.++
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 99999999999999999999999888999999999975 57788999999985 89999998764
No 31
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=6.2e-59 Score=627.13 Aligned_cols=211 Identities=23% Similarity=0.291 Sum_probs=176.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++|+||+++.+. +...+|+||||+|+|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEc
Confidence 5899999887632 224599999999999999999999999999999999998763 479999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
.. ..+++.++||||++.+|+. |++|||... ...+++ .+.++++..++.+. .|+.++. +
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~sde----eI~~Al~~a~l~~~I~~lp~Gldt~vge-~ 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEASSA----EVWAALELVGLRERVASESEGIDSRVLE-G 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCCHH----HHHHHHHHCCChHHHhhCcccccccccC-C
Confidence 54 4577889999999999875 999999531 123333 36778888877653 4666664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 844 VTGLSIEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~-p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
..+||||||||++|||||+++ |+||+||||||+||+.+...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVLd~ 1519 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKIIVMDH 1519 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEEEEEC
Confidence 457999999999999999996 89999999999999999999999999864 479999999986 56788999999985
Q ss_pred CcEEEEeCCCC
Q 000773 923 GGQVIYSGPLG 933 (1293)
Q Consensus 923 ~G~~~~~g~~~ 933 (1293)
|++++.|+++
T Consensus 1520 -G~VvE~Gt~~ 1529 (1560)
T PTZ00243 1520 -GAVAEMGSPR 1529 (1560)
T ss_pred -CEEEEECCHH
Confidence 9999999863
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-59 Score=573.73 Aligned_cols=204 Identities=16% Similarity=0.237 Sum_probs=164.1
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCC---CCCC
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQND---IHSP 793 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~ 793 (1293)
.+|++||+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|++ .+++
T Consensus 262 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~ 339 (491)
T PRK10982 262 PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYA 339 (491)
T ss_pred cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCccc
Confidence 489999999999999999999999999999999998763 479999999776421 1245589999985 4688
Q ss_pred CCCHHHHHHHHHH---hcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 794 QVTVKESLIYSAF---LRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 794 ~lTv~e~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
.+|+.+|..+... ..........+....++++++.+++. +..++.++ +|||||||||+||++|+.+|+||+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~la~al~~~p~ill 414 (491)
T PRK10982 340 YLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIG-----SLSGGNQQKVIIGRWLLTQPEILM 414 (491)
T ss_pred CCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccc-----cCCcHHHHHHHHHHHHhcCCCEEE
Confidence 8998877433210 11001012222334578889999995 45566654 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||||+|||+.++..+++.|++++++|+|||++||+++ ++...+|++++|.+ |+++..++..
T Consensus 415 LDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 415 LDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred EcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999999999999888999999999975 57788999999985 8988777653
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.6e-58 Score=563.33 Aligned_cols=204 Identities=21% Similarity=0.336 Sum_probs=158.6
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQNDIHSP 793 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~~~~~ 793 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..++ ..+|+|.++|.+... ...++.+||++|++.+++
T Consensus 271 ~~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 349 (490)
T PRK10938 271 NDRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDY 349 (490)
T ss_pred CCeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhc
Confidence 345699999999999999999999999999999999996431 137999999976421 123456999999876544
Q ss_pred --CCCHHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 794 --QVTVKESLIYSAFL--RLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 794 --~lTv~e~l~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
..|+++++.+.... ........ +..++++++++.+|+.+ ..++.++ .|||||||||+||+||+.+|++|
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~la~al~~~p~ll 423 (490)
T PRK10938 350 RVSTSVRNVILSGFFDSIGIYQAVSD-RQQKLAQQWLDILGIDKRTADAPFH-----SLSWGQQRLALIVRALVKHPTLL 423 (490)
T ss_pred ccCCcHHHHHHhccccccccccCCCH-HHHHHHHHHHHHcCCchhhccCchh-----hCCHHHHHHHHHHHHHhcCCCEE
Confidence 35777766543211 11111122 22345789999999987 7777655 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHH-HHhHhheeecCcEEEEeC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~d~v~~l~~~G~~~~~g 930 (1293)
+|||||+|||+.++..+.+.|++++++| .|||++||+++ ++.+ .+|++++|.+ |+++..-
T Consensus 424 lLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~~ 485 (490)
T PRK10938 424 ILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRYV 485 (490)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEee
Confidence 9999999999999999999999998775 47999999975 4555 4788999875 7776643
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8e-57 Score=488.48 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=176.0
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCC--CC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQND--IH 791 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~--~~ 791 (1293)
.+++++||+++++||.+||+|.||||||||=.+|.+...+ +|+|.++|.++.. ...++.+-.|+||| .+
T Consensus 300 ~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSL 376 (534)
T COG4172 300 LRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSL 376 (534)
T ss_pred eEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCC
Confidence 4689999999999999999999999999999999998753 5999999998753 23567789999997 47
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
.|.+||.|-+.-+.....+ ..+..++.+++.++++.+||.. ..+++. .++|||||||++||||++.+|++++|
T Consensus 377 sPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RYP-----hEFSGGQRQRIAIARAliLkP~~i~L 450 (534)
T COG4172 377 SPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRYP-----HEFSGGQRQRIAIARALILKPELILL 450 (534)
T ss_pred CcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcCC-----cccCcchhhHHHHHHHHhcCCcEEEe
Confidence 8999999988776555443 4678889999999999999975 445543 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||||.||-.-+.+|+++|+++.++ |.+-++++||+. -+-.++|+|++|.+ |+|++.||.+
T Consensus 451 DEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~~ 512 (534)
T COG4172 451 DEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPTE 512 (534)
T ss_pred cCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCHH
Confidence 9999999999999999999999755 899999999975 36678999999975 9999999963
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9e-56 Score=548.56 Aligned_cols=200 Identities=22% Similarity=0.323 Sum_probs=161.3
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++.. +++.+|+|||+++++||+++|+||||||||||+++|+|..++ .+|+|.+++ +
T Consensus 325 l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~-- 386 (556)
T PRK11819 325 IEAENLSKSF-------------GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T-- 386 (556)
T ss_pred EEEEeEEEEE-------------CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c--
Confidence 6677776543 345699999999999999999999999999999999998663 479999853 1
Q ss_pred hhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000773 775 QETFARISGYCEQND-IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 775 ~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGer 852 (1293)
..+||++|++ .+++.+||+|++.+...... ....+ ..++++++.+|+.+ ..++.++ +||||||
T Consensus 387 -----~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~~--~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~ 451 (556)
T PRK11819 387 -----VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNRE--IPSRAYVGRFNFKGGDQQKKVG-----VLSGGER 451 (556)
T ss_pred -----eEEEEEeCchhhcCCCCCHHHHHHhhccccc---ccccH--HHHHHHHHhCCCChhHhcCchh-----hCCHHHH
Confidence 1489999996 68889999999987542211 11111 12457899999964 4566654 7999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE-EeCC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI-YSGP 931 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~-~~g~ 931 (1293)
|||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. | |||++||+++ .+...+|++++|.++|++. +.|+
T Consensus 452 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g~ 527 (556)
T PRK11819 452 NRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEGN 527 (556)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecCC
Confidence 99999999999999999999999999999999999999872 4 8999999975 5777899999998657766 4554
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-55 Score=540.84 Aligned_cols=198 Identities=19% Similarity=0.251 Sum_probs=162.2
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGF-------------DNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEee-------------CCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 36777776543 345699999999999999999999999999999999998653 4799999873
Q ss_pred ChhcccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000773 774 KQETFARISGYCEQNDI--HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 774 ~~~~~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgG 850 (1293)
+.+||++|++. +++.+||+|++.+.. .. . . ..++++++++.+|+. +..++.++ +||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~-~---~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G-D---DEQAVRGTLGRLLFSQDDIKKSVK-----VLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C-c---cHHHHHHHHHHcCCChhHhcCccc-----ccCHH
Confidence 35899999864 566799999986421 11 1 1 123467899999994 56666655 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE-Ee
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI-YS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~-~~ 929 (1293)
|||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++ +.|||++||+++ .+...+|++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999975 56778999999985 7776 77
Q ss_pred CCC
Q 000773 930 GPL 932 (1293)
Q Consensus 930 g~~ 932 (1293)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.5e-55 Score=542.50 Aligned_cols=200 Identities=20% Similarity=0.305 Sum_probs=160.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 323 l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~-~-- 384 (552)
T TIGR03719 323 IEAENLSKGF-------------GDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGE-T-- 384 (552)
T ss_pred EEEeeEEEEE-------------CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECC-c--
Confidence 5677776543 345699999999999999999999999999999999998653 479999854 1
Q ss_pred hhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000773 775 QETFARISGYCEQND-IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 775 ~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGer 852 (1293)
..+||++|++ .+++.+||.|++.+...... ....+ ..++++++.+|+.+ ..++.++ .||||||
T Consensus 385 -----~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~~--~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe~ 449 (552)
T TIGR03719 385 -----VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKRE--VPSRAYVGRFNFKGSDQQKKVG-----QLSGGER 449 (552)
T ss_pred -----eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcch--HHHHHHHHhCCCChhHhcCchh-----hCCHHHH
Confidence 1489999986 47889999999987532111 11111 23457899999964 4566554 6999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE-EeCC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI-YSGP 931 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~-~~g~ 931 (1293)
|||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. .|||++||+++ .+...+|++++|.++|++. +.|+
T Consensus 450 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g~ 525 (552)
T TIGR03719 450 NRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEGN 525 (552)
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCCC
Confidence 99999999999999999999999999999999999999873 48999999975 5677899999998656766 4444
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.7e-54 Score=533.27 Aligned_cols=197 Identities=22% Similarity=0.260 Sum_probs=162.3
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHH
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKESL 801 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l 801 (1293)
.|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++ ..++|++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 48999999999999999999999999999999998763 47999885 1489999998888999999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000773 802 IYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 881 (1293)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~ 881 (1293)
.+.... .... ..++++++.+++.+..++.++ .|||||||||+||++|+.+|++|+|||||+|||+.+
T Consensus 422 ~~~~~~-----~~~~---~~~~~~L~~l~l~~~~~~~~~-----~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 422 RSITDD-----LGSS---YYKSEIIKPLQLERLLDKNVK-----DLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHhhh-----cChH---HHHHHHHHHCCCHHHHhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 864211 1111 235789999999887787765 699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCC---hhHHHHHHHhC
Q 000773 882 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRN---SHKVIEYYEAI 946 (1293)
Q Consensus 882 ~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~---~~~~~~~~~~~ 946 (1293)
+..+.+.|++++++ |+|||++|||+. .+...+|++++|. |++...|..... .+.+..+++.+
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHASGPMDMREGMNRFLKEL 554 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--CcceeeeecCCchhHHHHHHHHHHHc
Confidence 99999999999765 899999999975 4667899999995 477776764321 12234455555
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-53 Score=526.56 Aligned_cols=196 Identities=21% Similarity=0.327 Sum_probs=158.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++.. +++.+|+|+||+|++||++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 313 l~~~~l~~~y-------------~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~--- 374 (638)
T PRK10636 313 LKMEKVSAGY-------------GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG--- 374 (638)
T ss_pred EEEEeeEEEe-------------CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC---
Confidence 6677776543 44679999999999999999999999999999999999875 34799998641
Q ss_pred hhcccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000773 775 QETFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQ 851 (1293)
Q Consensus 775 ~~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGe 851 (1293)
..+||++|+. .+.+..|+.+++.. .. . ......+.++++.+++.. ..++.++ .|||||
T Consensus 375 -----~~igy~~Q~~~~~l~~~~~~~~~~~~---~~--~----~~~~~~~~~~L~~~~l~~~~~~~~~~-----~LSgGe 435 (638)
T PRK10636 375 -----IKLGYFAQHQLEFLRADESPLQHLAR---LA--P----QELEQKLRDYLGGFGFQGDKVTEETR-----RFSGGE 435 (638)
T ss_pred -----EEEEEecCcchhhCCccchHHHHHHH---hC--c----hhhHHHHHHHHHHcCCChhHhcCchh-----hCCHHH
Confidence 2589999974 35566788776531 11 1 112245788999999963 5666655 699999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE-EeC
Q 000773 852 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI-YSG 930 (1293)
Q Consensus 852 rqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~-~~g 930 (1293)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||+. .+...+|++++|.+ |+++ +.|
T Consensus 436 kqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~g 510 (638)
T PRK10636 436 KARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFDG 510 (638)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcCC
Confidence 99999999999999999999999999999999999999987 349999999975 56778999999985 7876 778
Q ss_pred CC
Q 000773 931 PL 932 (1293)
Q Consensus 931 ~~ 932 (1293)
+.
T Consensus 511 ~~ 512 (638)
T PRK10636 511 DL 512 (638)
T ss_pred CH
Confidence 75
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.4e-52 Score=524.61 Aligned_cols=201 Identities=23% Similarity=0.325 Sum_probs=160.0
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++.. +++.+|+|+||+|++||++||+|||||||||||++|+|..+ +.+|+|.+ |.+.
T Consensus 320 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~- 382 (635)
T PRK11147 320 FEMENVNYQI-------------DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL- 382 (635)
T ss_pred EEEeeeEEEE-------------CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc-
Confidence 5667766543 44569999999999999999999999999999999999865 34799988 4321
Q ss_pred hhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHH
Q 000773 775 QETFARISGYCEQND-IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 775 ~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGer 852 (1293)
.+||++|+. .+++.+||.|++.+.... . .... ....+.++++.+++. +..++.++ .||||||
T Consensus 383 ------~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGek 446 (635)
T PRK11147 383 ------EVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVNG--RPRHVLGYLQDFLFHPKRAMTPVK-----ALSGGER 446 (635)
T ss_pred ------EEEEEeCcccccCCCCCHHHHHHhhccc-c--cccc--hHHHHHHHHHhcCCCHHHHhChhh-----hCCHHHH
Confidence 489999985 588999999999864321 1 0111 123467889999985 45566655 6999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEE-EEeCC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQV-IYSGP 931 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~-~~~g~ 931 (1293)
|||+||++|+.+|++|||||||+|||+.++..+.+.|+++ +.|||++|||.. .+...+|+++++.++|++ .|.|+
T Consensus 447 qRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g~ 522 (635)
T PRK11147 447 NRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVGG 522 (635)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccCC
Confidence 9999999999999999999999999999999999999876 459999999965 566789999999733665 45555
Q ss_pred C
Q 000773 932 L 932 (1293)
Q Consensus 932 ~ 932 (1293)
.
T Consensus 523 y 523 (635)
T PRK11147 523 Y 523 (635)
T ss_pred H
Confidence 3
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-51 Score=476.08 Aligned_cols=203 Identities=19% Similarity=0.390 Sum_probs=168.3
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccC---CCCCCC
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQN---DIHSPQ 794 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~---~~~~~~ 794 (1293)
.++|+||++++||++||-|-=|||+|-|+++|.|..+ ...|+|.+||++... ...+..++|||.| +.++..
T Consensus 274 ~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~ 351 (500)
T COG1129 274 KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLD 351 (500)
T ss_pred ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCC
Confidence 5789999999999999999999999999999999554 347999999997643 2345579999987 568899
Q ss_pred CCHHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 795 VTVKESLIYSAFLRLAK--EVSKEDKIIFVEEVMDLVELESL-KDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
++|++|+.++...+... -.+.....+.+++..+.+++... .+..+ ..||||.+|||.|||.|..+|++|+||
T Consensus 352 ~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v-----~~LSGGNQQKVvlarwL~~~p~vLilD 426 (500)
T COG1129 352 MSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI-----GTLSGGNQQKVVLARWLATDPKVLILD 426 (500)
T ss_pred CcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh-----hcCCchhhhhHHHHHHHhcCCCEEEEC
Confidence 99999998873322221 24444555668888999988532 23333 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||.|+|.-++.+|.++|++++++|++||++|-+.. |+...||||++|.+ |+++..=+.+
T Consensus 427 EPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~~~ 486 (500)
T COG1129 427 EPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELDRE 486 (500)
T ss_pred CCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEeccc
Confidence 999999999999999999999999999999999975 89999999999985 8988744443
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.1e-49 Score=476.02 Aligned_cols=206 Identities=24% Similarity=0.253 Sum_probs=157.1
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcch
Q 000773 2 TLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTRY 81 (1293)
Q Consensus 2 ~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~~ 81 (1293)
++|||+||||||||||+|+|...|+ +|+|...+ ...++|++|++...+..||.+.+.-+... .+
T Consensus 32 iGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv~~~v~~~~~~-----~~ 95 (530)
T COG0488 32 IGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTVLDYVIEGFGE-----LR 95 (530)
T ss_pred EEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccHHHHHHhhhHH-----HH
Confidence 6899999999999999999999988 99998864 23689999999999899999999876431 11
Q ss_pred hhhhHhhHHhhhcCCCChhHHHHHH-HHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 82 ELLSELARREKDAGIFPEAEIDLFM-KATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
+...+..................+. ....+.+++.+..+..+|..||+++. ++.+++ ||||||.||+||++|.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~-----LSGG~r~Rv~LA~aL~ 169 (530)
T COG0488 96 ELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS-----LSGGWRRRVALARALL 169 (530)
T ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh-----cCHHHHHHHHHHHHHh
Confidence 1111111111100000111111111 22234557778889999999999887 888876 9999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeE-EEEcChhhHH
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQI-VYQGPRERVL 234 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i-~~~G~~~~~~ 234 (1293)
.+|++|+||||||+||..+..++-+.|++. .| |+|++ +|++...-+.|++|+-++.|++ .|.|.++...
T Consensus 170 ~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~g-tviiV-SHDR~FLd~V~t~I~~ld~g~l~~y~Gny~~~~ 239 (530)
T COG0488 170 EEPDLLLLDEPTNHLDLESIEWLEDYLKRY---PG-TVIVV-SHDRYFLDNVATHILELDRGKLTPYKGNYSSYL 239 (530)
T ss_pred cCCCEEEEcCCCcccCHHHHHHHHHHHHhC---CC-cEEEE-eCCHHHHHHHhhheEEecCCceeEecCCHHHHH
Confidence 999999999999999999999988888763 45 77774 6889999999999999999987 5777776544
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.3e-49 Score=491.64 Aligned_cols=200 Identities=19% Similarity=0.245 Sum_probs=155.3
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++... +++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 367778776541 124589999999999999999999999999999999998763 4799988652
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000773 774 KQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 774 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGer 852 (1293)
..+||++|+. .+.+++.++.........+ .... +.++++++.+|+.+ ..++.++ .||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~~----~~i~~~L~~~gl~~~~~~~~~~-----~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVPE----QKLRAHLGSFGVTGNLALQPMY-----TLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCCH----HHHHHHHHHCCCChHHhcCCcc-----ccCHHHH
Confidence 3589999985 3455666664332111111 1121 34678999999973 4555544 7999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE-EeCC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI-YSGP 931 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~-~~g~ 931 (1293)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. +.|||++||++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888764 349999999975 46678999999985 8887 6676
Q ss_pred C
Q 000773 932 L 932 (1293)
Q Consensus 932 ~ 932 (1293)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.1e-47 Score=429.56 Aligned_cols=207 Identities=19% Similarity=0.330 Sum_probs=172.4
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC----Ch-hcccceEEEEccCC---CC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK----KQ-ETFARISGYCEQND---IH 791 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~----~~-~~~~~~~~~v~q~~---~~ 791 (1293)
...+++|||++++||++||.|-.|-|-+-|+.+|+|..++ .+|+|.++|.+. +. ...+..++|||+|. .+
T Consensus 271 ~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Gl 348 (501)
T COG3845 271 VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGL 348 (501)
T ss_pred CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCcc
Confidence 3579999999999999999999999999999999997653 359999999985 22 22345689999985 56
Q ss_pred CCCCCHHHHHHHHHHhcC----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 792 SPQVTVKESLIYSAFLRL----AKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
.+.+|+.||+.+...-+. ..-.......+.+.++++.++....... ...+.||||++||+-+||+|..+|++
T Consensus 349 v~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~l 424 (501)
T COG3845 349 VLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDL 424 (501)
T ss_pred ccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCE
Confidence 789999999987654321 1124455666778899999998632211 12457999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
|+..+||.|||..+...|.+.|.+++++|+.|++++-+++ ++++++||+.+|.+ |+++...++++
T Consensus 425 LI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 425 LIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred EEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 9999999999999999999999999999999999999986 89999999999985 89998877764
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-47 Score=383.76 Aligned_cols=211 Identities=26% Similarity=0.370 Sum_probs=187.2
Q ss_pred ccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC----hhcccceEEEEc
Q 000773 711 KEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK----QETFARISGYCE 786 (1293)
Q Consensus 711 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~----~~~~~~~~~~v~ 786 (1293)
+++.+.+|+.++|+|||+++++||+++|+|||||||||||+||.++.. +.+|+|.++|.+.. -...|+.+|+|+
T Consensus 6 ~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVF 83 (240)
T COG1126 6 KNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVF 83 (240)
T ss_pred EeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeec
Confidence 455567788999999999999999999999999999999999999876 35899999997553 234678899999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
|+..+||++||.||+..+... -...++++.++++.++|+.+||.+.+|.++. +|||||||||+|||||+.+|+
T Consensus 84 Q~fnLFPHlTvleNv~lap~~--v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 84 QQFNLFPHLTVLENVTLAPVK--VKKLSKAEAREKALELLEKVGLADKADAYPA-----QLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred ccccccccchHHHHHHhhhHH--HcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----ccCcHHHHHHHHHHHHcCCCC
Confidence 999999999999999986432 2345778888889999999999999998865 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++++|||||.|||+...++++.+++++++|.|+|++||+.. -..+.+|||+.|++ |+++..|++
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~-FAr~VadrviFmd~-G~iie~g~p 220 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMG-FAREVADRVIFMDQ-GKIIEEGPP 220 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhH-HHHHhhheEEEeeC-CEEEEecCH
Confidence 99999999999999999999999999999999999999875 35677899999985 999999976
No 46
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-43 Score=365.29 Aligned_cols=222 Identities=27% Similarity=0.367 Sum_probs=193.5
Q ss_pred cccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEcc
Q 000773 714 GVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQ 787 (1293)
Q Consensus 714 ~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q 787 (1293)
.++++++.|++|||++|++||+++||||||+|||||||+|.|..++ .+|+|.++|.++.. ...++++|+++|
T Consensus 15 ~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ 92 (263)
T COG1127 15 TKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDIPQLSEEELYEIRKRMGVLFQ 92 (263)
T ss_pred eeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcchhccCHHHHHHHHhheeEEee
Confidence 3456889999999999999999999999999999999999998774 58999999988643 135677999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 788 NDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-KDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 788 ~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
+-.+|..+||+||+.|.. +.....+++..++.+..-++.+||... .+.... +||||||||++||||++.||+
T Consensus 93 ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~Ps-----ELSGGM~KRvaLARAialdPe 165 (263)
T COG1127 93 QGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLYPS-----ELSGGMRKRVALARAIALDPE 165 (263)
T ss_pred ccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhCch-----hhcchHHHHHHHHHHHhcCCC
Confidence 999999999999999864 333456777777888889999999877 666544 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC----ChhHHHH
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR----NSHKVIE 941 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~----~~~~~~~ 941 (1293)
|+|+||||+||||.++..+.++|+++.+. |.|++++|||.+ +++..+|++++|.+ |+|+..|++++ ..+-+.+
T Consensus 166 ll~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gkv~~~Gt~~el~~sd~P~v~q 243 (263)
T COG1127 166 LLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GKVIAEGTPEELLASDDPWVRQ 243 (263)
T ss_pred EEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CEEEEeCCHHHHHhCCCHHHHH
Confidence 99999999999999999999999999877 999999999986 68999999999985 89999999763 3345777
Q ss_pred HHHhC
Q 000773 942 YYEAI 946 (1293)
Q Consensus 942 ~~~~~ 946 (1293)
||...
T Consensus 244 f~~G~ 248 (263)
T COG1127 244 FFNGI 248 (263)
T ss_pred HhcCC
Confidence 77654
No 47
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=376.69 Aligned_cols=203 Identities=25% Similarity=0.347 Sum_probs=182.6
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCCCCC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~~~ 792 (1293)
...+|+|||++|++||++||+|+||||||||++++.++..| .+|+|.++|.++.. ...|+.||+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 35799999999999999999999999999999999998764 58999999976532 34578899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
...||.||+.|...+.. .++++.+++|.++++.+||.+.+++++. +|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP~-----qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYPA-----QLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCch-----hcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999876653 5788888999999999999999988865 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||.|||.+...|+++|+++.++ |.||+++||+++ -+-+.|||+.+|++ |++++.|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEEEeccHH
Confidence 99999999999999999999866 999999999864 35677999999985 9999999864
No 48
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.6e-43 Score=380.49 Aligned_cols=221 Identities=29% Similarity=0.405 Sum_probs=187.2
Q ss_pred ccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCC
Q 000773 713 QGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQND 789 (1293)
Q Consensus 713 ~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~ 789 (1293)
++..|+++.+|+|+||++++||+++|+||||||||||||+|+|..++ .+|+|.++|+++.. ..+.+.++||||..
T Consensus 8 ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~ 85 (258)
T COG1120 8 LSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDIASLSPKELAKKLAYVPQSP 85 (258)
T ss_pred EEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCchhhcCHHHHhhhEEEeccCC
Confidence 33455678899999999999999999999999999999999997763 47999999998654 45678899999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 790 IHSPQVTVKESLIYSAFLRLA--KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
...+.+||+|.+.++...+.. ...+++ ..+.++++++.+|+.+++++.+. .|||||||||.|||||+++|++
T Consensus 86 ~~~~~~tV~d~V~~GR~p~~~~~~~~~~~-D~~~v~~aL~~~~~~~la~r~~~-----~LSGGerQrv~iArALaQ~~~i 159 (258)
T COG1120 86 SAPFGLTVYELVLLGRYPHLGLFGRPSKE-DEEIVEEALELLGLEHLADRPVD-----ELSGGERQRVLIARALAQETPI 159 (258)
T ss_pred CCCCCcEEeehHhhcCCcccccccCCCHh-HHHHHHHHHHHhCcHHHhcCccc-----ccChhHHHHHHHHHHHhcCCCE
Confidence 999999999999876443211 112333 33468999999999999999876 6999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC--ChhHHHHHH
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR--NSHKVIEYY 943 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~--~~~~~~~~~ 943 (1293)
|+||||||.||...+.+++++++++++ +|+|||+++||++ ....++|++++|++ |++++.|++.+ ..+.+.+.|
T Consensus 160 LLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN-~A~ryad~~i~lk~-G~i~a~G~p~evlT~e~l~~Vy 236 (258)
T COG1120 160 LLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLN-LAARYADHLILLKD-GKIVAQGTPEEVLTEENLREVY 236 (258)
T ss_pred EEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEeecCcchhcCHHHHHHHh
Confidence 999999999999999999999999985 4999999999987 47788999999985 99999999764 233455555
No 49
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-43 Score=361.03 Aligned_cols=208 Identities=28% Similarity=0.397 Sum_probs=179.7
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQNDIH 791 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~~ 791 (1293)
+++++|+|||++|++||++||+|||||||||||++|.|..+ +.+|+|.++|.++.. ..+++.+||++|++.+
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 67889999999999999999999999999999999999766 358999999976532 2456789999999999
Q ss_pred CCCCCHHHHHHHHHHhcCC------CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 792 SPQVTVKESLIYSAFLRLA------KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~------~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
.+.+||.+|+..+..-+.+ .-.+++++ ..+-+.|+.+|+.+.+-++.+ +|||||+|||+|||||+++|
T Consensus 93 v~r~sv~~NVl~grl~~~s~~~slfglfsk~dk-~~Al~aLervgi~~~A~qra~-----~LSGGQQQRVaIARaL~Q~p 166 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDK-AQALDALERVGILDKAYQRAS-----TLSGGQQQRVAIARALVQQP 166 (258)
T ss_pred ccccHHHHHHHhhhcccchHHHHHhCCCCHHHH-HHHHHHHHHcCcHHHHHHHhc-----cCCcchhHHHHHHHHHhcCC
Confidence 9999999999876432211 12334444 557789999999998888776 69999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRN 935 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~ 935 (1293)
++++.|||+++|||.+++.+|+.|++++++ |.|||++.||.+. ..++|||++-|++ |+++|+||.++.
T Consensus 167 kiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~~-G~ivfDg~~~el 235 (258)
T COG3638 167 KIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLKA-GRIVFDGPASEL 235 (258)
T ss_pred CEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEecC-CcEEEeCChhhh
Confidence 999999999999999999999999999865 9999999999763 6688999999985 999999998653
No 50
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-43 Score=372.92 Aligned_cols=217 Identities=26% Similarity=0.444 Sum_probs=183.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++.. ++.++|+||||++++|++++|+||||||||||+|+|.|..+ +.+|+|.+.|.+.
T Consensus 4 ~i~v~nl~v~y-------------~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSY-------------GNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEE-------------CCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 35677776654 43369999999999999999999999999999999999776 3589999999887
Q ss_pred ChhcccceEEEEccCCCCC--CCCCHHHHHHHHHHhcC--CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 774 KQETFARISGYCEQNDIHS--PQVTVKESLIYSAFLRL--AKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 774 ~~~~~~~~~~~v~q~~~~~--~~lTv~e~l~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
.....+..+|||||...+. .-+||+|.+..+...+. ....++++ .+.++++|+.+|+.+++|+.++ .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d-~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKD-KEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHH-HHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 6544456899999965332 24799999987633322 12233344 5679999999999999999988 6999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||+|||.|||||+++|++|+|||||+|+|+.++..+.++|++++++|+||++++||++ .+.+.+|+++.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999997 6889999999995 589999
Q ss_pred CCCCC
Q 000773 930 GPLGR 934 (1293)
Q Consensus 930 g~~~~ 934 (1293)
|++++
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99864
No 51
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.7e-43 Score=395.11 Aligned_cols=209 Identities=30% Similarity=0.453 Sum_probs=185.3
Q ss_pred ccccccc-ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccC
Q 000773 712 EQGVAED-KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQN 788 (1293)
Q Consensus 712 ~~~~~~~-~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~ 788 (1293)
++.+.++ ++.+|+||||++++||++||+||||||||||+|+|+|...+ .+|+|.++|.+... ...++.+||+||+
T Consensus 9 ~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~ 86 (293)
T COG1131 9 NLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQE 86 (293)
T ss_pred ceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccC
Confidence 4445667 58899999999999999999999999999999999998774 58999999987654 3567789999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
+.+++.+||+|+|.|.+.++.... +...++++++++.+||.+..++.++ +||+|||||++||+||+++|++|
T Consensus 87 ~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~~-----~lS~G~kqrl~ia~aL~~~P~ll 158 (293)
T COG1131 87 PSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKVR-----TLSGGMKQRLSIALALLHDPELL 158 (293)
T ss_pred CCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcchh-----hcCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999998876432 3445578999999999986555554 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||||||+||||.++..+++.|++++++| +||+++||+++ ++...||++++|.+ |++++.|+.
T Consensus 159 iLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~ 221 (293)
T COG1131 159 ILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTP 221 (293)
T ss_pred EECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 9999999999999999999999999887 89999999986 68888999999985 999999975
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-43 Score=368.64 Aligned_cols=194 Identities=26% Similarity=0.381 Sum_probs=173.3
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~l 795 (1293)
.++...+|+|||++|++||+++|+||||||||||||+|+|..++ .+|+|.++|.+... ....+|||+|++.++|.+
T Consensus 12 ~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v~~--p~~~~~~vFQ~~~LlPW~ 87 (248)
T COG1116 12 SFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPVTG--PGPDIGYVFQEDALLPWL 87 (248)
T ss_pred EeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCcccCC--CCCCEEEEeccCcccchh
Confidence 44557899999999999999999999999999999999998774 58999999998732 345689999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
||+||+.++...+. .+++++.+++++.++.+||.+..|+... +|||||||||+|||||+.+|++|+||||++
T Consensus 88 Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----qLSGGMrQRVaiARAL~~~P~lLLlDEPFg 159 (248)
T COG1116 88 TVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYPH-----QLSGGMRQRVAIARALATRPKLLLLDEPFG 159 (248)
T ss_pred hHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCcc-----ccChHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999999876543 3456666789999999999999998865 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 876 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
.||+.|+..+.+.|.++.+ .++||+++|||.+ |...+.|||++|.+
T Consensus 160 ALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~ 206 (248)
T COG1116 160 ALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSN 206 (248)
T ss_pred hhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecC
Confidence 9999999999999999865 4899999999986 77888999999985
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-43 Score=363.13 Aligned_cols=210 Identities=25% Similarity=0.349 Sum_probs=188.1
Q ss_pred cccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccC
Q 000773 712 EQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQN 788 (1293)
Q Consensus 712 ~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~ 788 (1293)
++++.|+++.+++|+|++|++||++.++|||||||||+||+|.+..++ .+|+|.+||+++.. ..+|+.+|||-|.
T Consensus 6 nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~~~d~~~LRr~IGYviQq 83 (309)
T COG1125 6 NVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDISDLDPVELRRKIGYVIQQ 83 (309)
T ss_pred eeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecccCCHHHHHHhhhhhhhh
Confidence 444566788999999999999999999999999999999999998874 58999999998754 3578899999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES--LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
-.+||++||.||+.+-..+. ..++++.+++++|+++.+||.. +++++.. +|||||+|||.+||||+.+|+
T Consensus 84 igLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----eLSGGQQQRVGv~RALAadP~ 155 (309)
T COG1125 84 IGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRYPH-----ELSGGQQQRVGVARALAADPP 155 (309)
T ss_pred cccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----hcCcchhhHHHHHHHHhcCCC
Confidence 99999999999998765553 3567777888999999999974 7787754 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|++|||+++|||.++.++++.++++.++ |+|||++|||.+ |.+.+.||+.+|+ +|+++..++++
T Consensus 156 ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 156 ILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred eEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 99999999999999999999999999876 999999999986 7889999999998 58999999875
No 54
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-43 Score=348.89 Aligned_cols=210 Identities=26% Similarity=0.380 Sum_probs=188.1
Q ss_pred cccccccccc-cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccC
Q 000773 712 EQGVAEDKLR-LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQN 788 (1293)
Q Consensus 712 ~~~~~~~~~~-iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~ 788 (1293)
++.++|+.+. +++||||+++.||++||+|||||||||+|++|++...| .+|.|.++|.+... ...++.+|.++.+
T Consensus 6 ~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e 83 (245)
T COG4555 6 DLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGE 83 (245)
T ss_pred ehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCC
Confidence 3444555544 99999999999999999999999999999999998774 58999999987533 3567889999988
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
..++..||++|||.|.+.+.. ....+.+++.+++.+.++|.++.|+.++ ++|.|+||||+|||||+++|+++
T Consensus 84 ~glY~RlT~rEnl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~ 155 (245)
T COG4555 84 RGLYARLTARENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSIL 155 (245)
T ss_pred cChhhhhhHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeE
Confidence 999999999999999988753 4566677889999999999999999988 69999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|||||||||..+.+.+.+.++++.++|++||++||..+ ++..+||++++|.+ |++++.|+.+
T Consensus 156 vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 156 VLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred EEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999999999999988999999999975 77789999999985 8999999874
No 55
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-42 Score=366.29 Aligned_cols=213 Identities=30% Similarity=0.455 Sum_probs=189.0
Q ss_pred ccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCc---cCCh-hcccceEEEEc
Q 000773 711 KEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGF---PKKQ-ETFARISGYCE 786 (1293)
Q Consensus 711 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~---~~~~-~~~~~~~~~v~ 786 (1293)
++.++..+...+++|||++|+.||++|++|||||||||||++|+|..++ ..|.|.+||+ +.+. ....|++|||+
T Consensus 6 ~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvF 83 (345)
T COG1118 6 NNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVF 83 (345)
T ss_pred hhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEE
Confidence 3444556778899999999999999999999999999999999998774 5899999998 5443 23457899999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
|+..+|++|||.||+.|+...+ ....++.+.+.+++++|+.+.|++..++++. +|||||||||++||||+.+|+
T Consensus 84 Q~YALF~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP~-----QLSGGQrQRVALARALA~eP~ 157 (345)
T COG1118 84 QHYALFPHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYPA-----QLSGGQRQRVALARALAVEPK 157 (345)
T ss_pred echhhcccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCch-----hcChHHHHHHHHHHHhhcCCC
Confidence 9999999999999999998766 2234456667789999999999999998865 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|+||||+++||..-+..+.+.|+++.++ |.|++++|||+. +..+.+|||++|++ |+|...||++
T Consensus 158 vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 158 VLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred eEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 99999999999999999999999999876 999999999986 89999999999985 8999999975
No 56
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-41 Score=356.84 Aligned_cols=193 Identities=29% Similarity=0.437 Sum_probs=167.6
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEccCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~ 792 (1293)
..+|++||++|++||+++|+|||||||||||++|.|...+ .+|.|.++|.+... .-+++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998774 58999999976532 12346799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKD-AIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~-~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
|++||+||+.+...+... ...++.++++++++.+||.+..+ +.+. +|||||||||+|||||+.+|++++.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~p~-----eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKKPS-----ELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCCch-----hcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22245566889999999997665 5544 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
|||.+||+.++..|++++++++++ |+|||++|||+ ++...+||++.|.+ |+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 999999999999999999999866 99999999985 58889999999986 66
No 57
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=341.38 Aligned_cols=212 Identities=25% Similarity=0.327 Sum_probs=180.4
Q ss_pred ccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCC---CCCceeEEEEEcCccCCh-----hcccceEEE
Q 000773 713 QGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRK---TGGYIEGDIRISGFPKKQ-----ETFARISGY 784 (1293)
Q Consensus 713 ~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~---~~~~~~G~i~~~g~~~~~-----~~~~~~~~~ 784 (1293)
+++.|+++++|+|||+.|++++++|+||||||||||||+++.... ++-.++|+|.++|+++.. ..+|+.+|+
T Consensus 13 l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGM 92 (253)
T COG1117 13 LNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGM 92 (253)
T ss_pred eeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHhee
Confidence 334567889999999999999999999999999999999999843 334678999999988643 346788999
Q ss_pred EccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000773 785 CEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVA 863 (1293)
Q Consensus 785 v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~ 863 (1293)
|+|.|..|| +|++||+.|+.++.... + ++..+.|++.|+...|.+ .+|+.-.. ..+|||||+||+||||||+.
T Consensus 93 VFQkPnPFp-~SIydNVayG~r~~g~~--~-~~ldeiVe~sLk~AaLWdEVKDrL~~s--a~~LSGGQQQRLcIARalAv 166 (253)
T COG1117 93 VFQKPNPFP-MSIYDNVAYGLRLHGIK--D-KELDEIVESSLKKAALWDEVKDRLHKS--ALGLSGGQQQRLCIARALAV 166 (253)
T ss_pred eccCCCCCC-chHHHHHHHhHHhhccc--h-HHHHHHHHHHHHHhHhHHHhHHHhhCC--ccCCChhHHHHHHHHHHHhc
Confidence 999999999 99999999987765433 2 556677888898888854 55554333 34799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 864 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 864 ~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|+||+||||||+|||.+...|-+++.+++ +.-|||++||.+. ...+..|+...+.. |+++++|+++
T Consensus 167 ~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~LvE~g~T~ 233 (253)
T COG1117 167 KPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GELVEFGPTD 233 (253)
T ss_pred CCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cEEEEEcCHH
Confidence 999999999999999999999999999997 4689999999875 57788999999985 8999999974
No 58
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-42 Score=381.28 Aligned_cols=210 Identities=27% Similarity=0.385 Sum_probs=188.5
Q ss_pred cccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-hcccceEEEEccCCC
Q 000773 712 EQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-ETFARISGYCEQNDI 790 (1293)
Q Consensus 712 ~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~ 790 (1293)
++.+.+++..+|+|||++++.||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.+. ...+|.+++|+|+..
T Consensus 8 ~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yA 85 (338)
T COG3839 8 NVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYA 85 (338)
T ss_pred eeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCcc
Confidence 33445565459999999999999999999999999999999999876 458999999998765 345688999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+||+|||+||+.|+...+ ..++++..++|+++.+.+++.+..|+++. +|||||||||+|||||+++|++++|
T Consensus 86 LyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 86 LYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----QLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred ccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCcc-----cCChhhHHHHHHHHHHhcCCCEEEe
Confidence 999999999999987665 34667778899999999999999999865 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||.|+||+..+..+...|+++.++ |.|+|.+|||. .|...++||+++|. +|++...|++.
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~p~ 219 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGTPL 219 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCChH
Confidence 9999999999999999999998876 89999999996 47888999999998 59999999875
No 59
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=344.79 Aligned_cols=205 Identities=23% Similarity=0.379 Sum_probs=171.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCC----ccccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNE----FVPQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~----~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+|||||||||||++|.|+.+++ +|+|.++|.++.. ...++.+|+|+|+..+||.+||.||+..+.....
T Consensus 30 vv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~ 106 (240)
T COG1126 30 VVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVK 106 (240)
T ss_pred EEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHHc
Confidence 47999999999999999999999998 9999999976542 2246789999999999999999999998754221
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. ++ ..+.++...++|+.+||.+.+|... .+|||||||||+||
T Consensus 107 ~---------~~------------------------k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGGQqQRVAIA 148 (240)
T COG1126 107 K---------LS------------------------KAEAREKALELLEKVGLADKADAYP-----AQLSGGQQQRVAIA 148 (240)
T ss_pred C---------CC------------------------HHHHHHHHHHHHHHcCchhhhhhCc-----cccCcHHHHHHHHH
Confidence 1 11 1122344667899999999888655 56999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEF 236 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~ 236 (1293)
|||+.+|+++++|||||+|||....++++.++++++ .|.|.+++ +|.+..+.+.+|||+.|++|++++.|+++++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-eGmTMivV-THEM~FAr~VadrviFmd~G~iie~g~p~~~f-- 224 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMIIV-THEMGFAREVADRVIFMDQGKIIEEGPPEEFF-- 224 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-cCCeEEEE-echhHHHHHhhheEEEeeCCEEEEecCHHHHh--
Confidence 999999999999999999999999999999999997 58999986 56678999999999999999999999988863
Q ss_pred HHhCCCCCCCCCChhhHHHH
Q 000773 237 FESCGFCCPERKGTADFLQE 256 (1293)
Q Consensus 237 f~~~G~~~~~~~~~~~~~~~ 256 (1293)
..|.+....+|+..
T Consensus 225 ------~~p~~~R~~~FL~~ 238 (240)
T COG1126 225 ------DNPKSERTRQFLSK 238 (240)
T ss_pred ------cCCCCHHHHHHHHh
Confidence 34665555666543
No 60
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.6e-42 Score=342.55 Aligned_cols=213 Identities=24% Similarity=0.357 Sum_probs=188.1
Q ss_pred ccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhc----ccceEEEEc
Q 000773 711 KEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQET----FARISGYCE 786 (1293)
Q Consensus 711 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~----~~~~~~~v~ 786 (1293)
+++.++|++++++++||+++++||++|++|||||||||.+.++.|...+ .+|.|.+||.++.... -+.-+||+|
T Consensus 8 ~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLp 85 (243)
T COG1137 8 ENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLP 85 (243)
T ss_pred hhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCccccc
Confidence 4667788999999999999999999999999999999999999998764 4899999999876532 223589999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
|++..|..|||+||+......+.. .....+++.+.+++++.+++.++++.+.. .||||||||+.|||||+.+|+
T Consensus 86 QE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a~-----sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 86 QEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKAY-----SLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCccc-----ccccchHHHHHHHHHHhcCCC
Confidence 999999999999999876655432 22234555668899999999999998755 699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
.++||||++|+||.+..+|.++++.+++.|..|++|-|... |....+||..++.+ |++.++|+++
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999999999987 78999999999986 8999999975
No 61
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=380.80 Aligned_cols=210 Identities=26% Similarity=0.400 Sum_probs=188.2
Q ss_pred ccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCC
Q 000773 713 QGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIH 791 (1293)
Q Consensus 713 ~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~ 791 (1293)
+.+.|++..+|+|||++|++||+++|+|||||||||||++|+|...+ .+|+|.++|+++... ..+|.+|+|+|+..+
T Consensus 11 v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YAL 88 (352)
T COG3842 11 VSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDITDVPPEKRPIGMVFQSYAL 88 (352)
T ss_pred eeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCChhhcccceeecCccc
Confidence 34456788899999999999999999999999999999999998774 589999999987653 457889999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
||+|||+||+.|+..++ ....+++..++++++++.++|.+.+++++. +|||||||||+|||||+.+|++|+||
T Consensus 89 FPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----qLSGGQqQRVALARAL~~~P~vLLLD 161 (352)
T COG3842 89 FPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKPH-----QLSGGQQQRVALARALVPEPKVLLLD 161 (352)
T ss_pred CCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhChh-----hhChHHHHHHHHHHHhhcCcchhhhc
Confidence 99999999999987633 334556677889999999999999998865 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||.|+||..-+.++...|+++.++ |.|.|++|||.. |...+.|||++|.+ |++...|+++
T Consensus 162 EPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gtP~ 222 (352)
T COG3842 162 EPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGTPE 222 (352)
T ss_pred CcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCCHH
Confidence 999999999999999999998765 999999999975 78889999999985 9999999875
No 62
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.9e-36 Score=399.74 Aligned_cols=215 Identities=21% Similarity=0.368 Sum_probs=183.6
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++.+|++.... .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 928 ~L~I~nLsK~y~-----------~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~dI 994 (2272)
T TIGR01257 928 GVCVKNLVKIFE-----------PSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKDI 994 (2272)
T ss_pred eEEEEeEEEEec-----------CCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 567777765431 0246799999999999999999999999999999999998763 589999999886
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000773 774 KQ--ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQ 851 (1293)
Q Consensus 774 ~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 851 (1293)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.+++++++++.+||.+..|+.++ +|||||
T Consensus 995 ~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~~-----~LSGGq 1066 (2272)
T TIGR01257 995 ETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEAQ-----DLSGGM 1066 (2272)
T ss_pred cchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHH
Confidence 43 2345679999999999999999999998766542 2333444568899999999988888765 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCC
Q 000773 852 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGP 931 (1293)
Q Consensus 852 rqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~ 931 (1293)
||||+||+||+.+|++|+|||||+|||+.+++.++++|++++ +|+|||++||+++ ++...+||+++|.+ |+++..|+
T Consensus 1067 KQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~Gs 1143 (2272)
T TIGR01257 1067 QRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSGT 1143 (2272)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecC
Confidence 999999999999999999999999999999999999999985 5999999999975 56678999999985 89999998
Q ss_pred C
Q 000773 932 L 932 (1293)
Q Consensus 932 ~ 932 (1293)
.
T Consensus 1144 ~ 1144 (2272)
T TIGR01257 1144 P 1144 (2272)
T ss_pred H
Confidence 5
No 63
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.2e-40 Score=327.76 Aligned_cols=199 Identities=27% Similarity=0.370 Sum_probs=173.6
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~~ 793 (1293)
+.+|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|.++... -.+|.||+|+||..+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 569999999999999999999999999999999999766 3579999999986431 25788999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
+.||.||+.|+.... ..++++.+++|.++|+.+||.+.++.... +|||||+|||+||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARALPS-----QLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcCcc-----ccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 999999999976554 34566777889999999999998877644 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHh-HhheeecCcEEEEeCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD-ELLLLKRGGQVIYSGP 931 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d-~v~~l~~~G~~~~~g~ 931 (1293)
|.+|||..+..|++++.++.+.|.||++.||+ .++.+... +++.|. +|+++.+..
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd--~~lv~~~~~rvl~l~-~Grl~~d~~ 220 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHD--LELVNRMRHRVLALE-DGRLVRDES 220 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEecc--HHHHHhccCcEEEEe-CCEEEeccc
Confidence 99999999999999999999999999999998 45666555 566665 589887543
No 64
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=367.71 Aligned_cols=185 Identities=19% Similarity=0.258 Sum_probs=142.5
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccC--CCCCCCCCHH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQN--DIHSPQVTVK 798 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~--~~~~~~lTv~ 798 (1293)
.++++++|-+.+++.+|++||||||||||||++.|...+ ..|.|.-.-+. .+++..|+ +.+.-+.++-
T Consensus 404 ~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~--------~~~~y~Qh~~e~ldl~~s~l 473 (614)
T KOG0927|consen 404 MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN--------KLPRYNQHLAEQLDLDKSSL 473 (614)
T ss_pred hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc--------cchhhhhhhHhhcCcchhHH
Confidence 689999999999999999999999999999999997763 46776543221 23333443 2333456777
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 799 ESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-KDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 799 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
|++.-. .+. +.+.+.+..++..+||... .+.. .++||+|||+||..|+.++..|.+|+|||||+||
T Consensus 474 e~~~~~----~~~----~~~~e~~r~ilgrfgLtgd~q~~p-----~~~LS~Gqr~rVlFa~l~~kqP~lLlLDEPtnhL 540 (614)
T KOG0927|consen 474 EFMMPK----FPD----EKELEEMRSILGRFGLTGDAQVVP-----MSQLSDGQRRRVLFARLAVKQPHLLLLDEPTNHL 540 (614)
T ss_pred HHHHHh----ccc----cchHHHHHHHHHHhCCCccccccc-----hhhcccccchhHHHHHHHhcCCcEEEecCCCcCC
Confidence 766421 111 1223447789999999844 3443 3489999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 878 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|..+...+-+.|.+. ..+||.++||.. -+-+.++++.+..+++...+.|..
T Consensus 541 Di~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 541 DIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred CchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecCccH
Confidence 999999988888765 468999999976 377788999999887777777763
No 65
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=8.9e-40 Score=373.81 Aligned_cols=204 Identities=28% Similarity=0.408 Sum_probs=178.8
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ 794 (1293)
++++.+|+||||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||+||++.+++.
T Consensus 17 ~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~ 94 (306)
T PRK13537 17 YGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPD 94 (306)
T ss_pred ECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEecccchHHHHhcEEEEeccCcCCCC
Confidence 4456799999999999999999999999999999999998763 57999999988643 2345779999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+||+||+.+.+..+. .+.++...+++++++.+++.+..++.++ +||||||||++||+||+++|++|+|||||
T Consensus 95 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~aL~~~P~lllLDEPt 166 (306)
T PRK13537 95 FTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKVG-----ELSGGMKRRLTLARALVNDPDVLVLDEPT 166 (306)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCchh-----hCCHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 999999998665432 2334444567899999999988888765 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|++
T Consensus 167 ~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 222 (306)
T PRK13537 167 TGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGAP 222 (306)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999877999999999975 67788999999985 899999986
No 66
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=337.26 Aligned_cols=199 Identities=29% Similarity=0.389 Sum_probs=169.4
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCC--CCCCC
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQND--IHSPQ 794 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~--~~~~~ 794 (1293)
++|++|||++.+||++||+|+||||||||.++|+|..++ .+|+|.++|.+.... .+.+.+.+|+||+ .+.|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 499999999999999999999999999999999998774 589999999775432 3567899999997 47899
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.||++.|.-+... ...++.+ +++.++++.+||.+ ..++.. .+||||||||++|||||+.+|++|+||||
T Consensus 99 ~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~P-----~eLSGGQ~QRiaIARAL~~~PklLIlDEp 168 (252)
T COG1124 99 RTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRRP-----HELSGGQRQRIAIARALIPEPKLLILDEP 168 (252)
T ss_pred hhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcCc-----hhcChhHHHHHHHHHHhccCCCEEEecCc
Confidence 9999988654332 2233333 33889999999965 455543 37999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||+||+..+.+|+++|.++.++ |.|.|++|||.+ -+...|||+++|++ |++++.++.+
T Consensus 169 tSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ivE~~~~~ 227 (252)
T COG1124 169 TSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQIVEIGPTE 227 (252)
T ss_pred hhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-CeEEEeechh
Confidence 9999999999999999999865 889999999976 46778999999985 9999999864
No 67
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.5e-39 Score=331.69 Aligned_cols=210 Identities=25% Similarity=0.415 Sum_probs=191.6
Q ss_pred cccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCC
Q 000773 710 MKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQND 789 (1293)
Q Consensus 710 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~ 789 (1293)
++++.++++++.+++|+||+++||++.|++|||||||||++++|.|...+ .+|.|.++|.+.+.. .+.+|||+|.+.
T Consensus 5 ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~~~-~~~rIGyLPEER 81 (300)
T COG4152 5 IEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLSQE-IKNRIGYLPEER 81 (300)
T ss_pred EecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchhhh-hhhhcccChhhh
Confidence 44566788999999999999999999999999999999999999998874 589999999988754 355689999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
.++|.+||.|.|.|.|.++ .+++++..+.++.+|+.+++.....+++. .||.|++|++.+..+++++|++++
T Consensus 82 GLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kIk-----~LSKGnqQKIQfisaviHePeLlI 153 (300)
T COG4152 82 GLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKIK-----ELSKGNQQKIQFISAVIHEPELLI 153 (300)
T ss_pred ccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchHH-----HhhhhhhHHHHHHHHHhcCCCEEE
Confidence 9999999999999999886 46677777889999999999998887765 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||||+|||||.+.+.+.+.+.+++++|.|||+++|+++ .+.++||++++|.+ |+.|.+|+.
T Consensus 154 LDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 154 LDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 99999999999999999999999999999999999986 68899999999985 888999986
No 68
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.5e-39 Score=368.24 Aligned_cols=202 Identities=24% Similarity=0.320 Sum_probs=176.6
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~~ 793 (1293)
+.+|+||||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 4699999999999999999999999999999999998763 589999999876431 23567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+||+||+.+..... ..++++..+++.++++.+||.+..|+.++ +|||||||||+|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~~-----~LSgGqkQRV~IARAL~~~P~iLLlDEP 167 (343)
T TIGR02314 96 SRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYPS-----NLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred cCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999999999865432 23445555678999999999988887755 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|++||+.++..++++|++++++ |.|||++||+++ .+.+.||++++|++ |++++.|+..
T Consensus 168 ts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv~~g~~~ 226 (343)
T TIGR02314 168 TSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELIEQGTVS 226 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999999875 999999999975 46688999999985 8999999863
No 69
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-39 Score=374.37 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=179.5
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-hcccceEEEEccCCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|++|
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~t 92 (356)
T PRK11650 15 GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMS 92 (356)
T ss_pred CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCC
Confidence 34679999999999999999999999999999999999876 358999999987643 123467999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
|+||+.|....+ ..++++..++++++++.+||.+..++.+. +|||||||||+|||||+.+|++|+|||||++
T Consensus 93 v~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~QRvalARAL~~~P~llLLDEP~s~ 164 (356)
T PRK11650 93 VRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKPR-----ELSGGQRQRVAMGRAIVREPAVFLFDEPLSN 164 (356)
T ss_pred HHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 999999875432 23455555678999999999998888765 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 877 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|.+ |+++..|+++
T Consensus 165 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~~ 220 (356)
T PRK11650 165 LDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTPV 220 (356)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCHH
Confidence 9999999999999998775 999999999975 68889999999975 9999999864
No 70
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3e-39 Score=316.36 Aligned_cols=197 Identities=27% Similarity=0.369 Sum_probs=172.9
Q ss_pred ceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHHHHH
Q 000773 725 EVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVTVKESLIY 803 (1293)
Q Consensus 725 ~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lTv~e~l~~ 803 (1293)
..+++|++||++||+||||||||||||+|+|...| .+|+|.+||.+.... ...|-+..++|+..+|.++||.+|+.+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 46788999999999999999999999999998764 589999999986543 345668999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000773 804 SAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 883 (1293)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~ 883 (1293)
+....+ +.+.++ .++++.++..+||..+.++..+ +|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL~a~~-r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KLNAEQ-REKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--ccCHHH-HHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643222 234444 3568999999999999999876 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 884 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 884 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
++..++.+++++ +.|++++||+|+ +.....|+++++++ |+|.+.|+.+
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~~ 215 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGSTQ 215 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccHH
Confidence 999999999865 899999999997 79999999999985 9999999863
No 71
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=7.5e-39 Score=369.38 Aligned_cols=205 Identities=27% Similarity=0.388 Sum_probs=178.5
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSP 793 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~ 793 (1293)
+++++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++
T Consensus 50 ~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~ 127 (340)
T PRK13536 50 SYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPVPARARLARARIGVVPQFDNLDL 127 (340)
T ss_pred EECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEECCcchHHHhccEEEEeCCccCCC
Confidence 34556799999999999999999999999999999999998764 48999999987643 234567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+||+||+.+.+..+. .+.++..++++++++.++|.+..++.++ +||||||||++||+||+++|++|+||||
T Consensus 128 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G~kqrv~lA~aL~~~P~lLiLDEP 199 (340)
T PRK13536 128 EFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGGMKRRLTLARALINDPQLLILDEP 199 (340)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 9999999987654432 2333344567889999999988888766 6999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|++
T Consensus 200 t~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 256 (340)
T PRK13536 200 TTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGRP 256 (340)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 9999999999999999999878999999999975 67788999999985 899999986
No 72
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5.8e-39 Score=372.24 Aligned_cols=205 Identities=26% Similarity=0.393 Sum_probs=180.3
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-hcccceEEEEccCCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-ETFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~l 795 (1293)
++++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|++... ...++.+|||+|+..++|++
T Consensus 14 ~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~ 91 (353)
T TIGR03265 14 FGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNL 91 (353)
T ss_pred eCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCC
Confidence 345679999999999999999999999999999999999876 358999999987643 22356799999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
||+||+.|+...+ ..++++..++++++++.+||.+..++.+. +|||||||||+|||||+.+|++|+|||||+
T Consensus 92 tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~~-----~LSgGq~QRvaLARaL~~~P~llLLDEP~s 163 (353)
T TIGR03265 92 TVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYPG-----QLSGGQQQRVALARALATSPGLLLLDEPLS 163 (353)
T ss_pred cHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999999976432 23455566778999999999998888755 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 876 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+++
T Consensus 164 ~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~~~ 220 (353)
T TIGR03265 164 ALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGTPQ 220 (353)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999998765 899999999975 67889999999985 8999999864
No 73
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-39 Score=354.65 Aligned_cols=205 Identities=26% Similarity=0.354 Sum_probs=174.5
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQNDI 790 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~ 790 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~ 87 (235)
T cd03261 10 FGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGA 87 (235)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccChhhHHHHhcceEEEccCcc
Confidence 3445699999999999999999999999999999999998763 47999999987532 224567999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+++.+||+||+.+...... ..+.++..++++++++.+|+.+..++.++ +|||||||||+||+||+.+|++|+|
T Consensus 88 ~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~ia~al~~~p~llll 160 (235)
T cd03261 88 LFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYPA-----ELSGGMKKRVALARALALDPELLLY 160 (235)
T ss_pred cCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999999999987643221 12344444567889999999887777655 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|.+ |++++.|+.
T Consensus 161 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 161 DEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 9999999999999999999999874 899999999975 56778999999985 899998875
No 74
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-39 Score=337.14 Aligned_cols=215 Identities=26% Similarity=0.363 Sum_probs=186.9
Q ss_pred cccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEE
Q 000773 710 MKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYC 785 (1293)
Q Consensus 710 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v 785 (1293)
.+++++++|+..+++|||+++++||++||+||||||||||+|+|+|..++ ..|+|.++|+++... ..+.-++..
T Consensus 7 v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RT 84 (250)
T COG0411 7 VRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIART 84 (250)
T ss_pred eccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceee
Confidence 34566778899999999999999999999999999999999999998774 479999999987542 224457889
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhc--------CCCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHH
Q 000773 786 EQNDIHSPQVTVKESLIYSAFLR--------LAKE-VSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLT 856 (1293)
Q Consensus 786 ~q~~~~~~~lTv~e~l~~~~~~~--------~~~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ 856 (1293)
+|...+|++|||.||+..++..+ .+.. ...++..+++.++++.+||.+.+|+..+ +||+|||||+.
T Consensus 85 FQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LE 159 (250)
T COG0411 85 FQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLE 159 (250)
T ss_pred cccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHH
Confidence 99999999999999998875533 1111 1234555778899999999999999987 69999999999
Q ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 857 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 857 ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||||+.+|++|+||||.+||.+....++.+.|+++.++ |.||+++.|+.+ -+..++||+++|+. |++++.|+++
T Consensus 160 IArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 160 IARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred HHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHH
Confidence 999999999999999999999999999999999999875 799999999987 48899999999985 8999999986
No 75
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-39 Score=370.32 Aligned_cols=214 Identities=24% Similarity=0.392 Sum_probs=185.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|++.. ++++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++.
T Consensus 7 l~~~~l~~~-------------~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i~ 71 (351)
T PRK11432 7 VVLKNITKR-------------FGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDVT 71 (351)
T ss_pred EEEEeEEEE-------------ECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEECC
Confidence 566776654 3456699999999999999999999999999999999998763 5899999998764
Q ss_pred hh-cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000773 775 QE-TFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRK 853 (1293)
Q Consensus 775 ~~-~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 853 (1293)
.. ..++.+|||+|+..++|++||+||+.|....+ ..++++..++++++++.+|+.+..++.+. .|||||||
T Consensus 72 ~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~~-----~LSgGq~Q 143 (351)
T PRK11432 72 HRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYVD-----QISGGQQQ 143 (351)
T ss_pred CCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHH
Confidence 32 23467999999999999999999999986543 23455666778999999999998887755 79999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 854 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 854 rv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++..++|++++|++ |+++..|++
T Consensus 144 RVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~~ 221 (351)
T PRK11432 144 RVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGSP 221 (351)
T ss_pred HHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999999765 899999999975 67889999999985 899999986
Q ss_pred C
Q 000773 933 G 933 (1293)
Q Consensus 933 ~ 933 (1293)
+
T Consensus 222 ~ 222 (351)
T PRK11432 222 Q 222 (351)
T ss_pred H
Confidence 4
No 76
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-38 Score=365.51 Aligned_cols=204 Identities=27% Similarity=0.415 Sum_probs=177.5
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ 794 (1293)
++++.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++.
T Consensus 3 y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 80 (302)
T TIGR01188 3 YGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDED 80 (302)
T ss_pred eCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCC
Confidence 3456799999999999999999999999999999999998763 58999999987643 2345679999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+||+||+.+.+..+. .+.++..++++++++.+|+.+..++.++ +|||||||||+||+||+.+|++|+|||||
T Consensus 81 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt 152 (302)
T TIGR01188 81 LTGRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPVG-----TYSGGMRRRLDIAASLIHQPDVLFLDEPT 152 (302)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999998765432 2334444568899999999988887765 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 153 ~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 153 TGLDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999877999999999975 67788999999985 899999885
No 77
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.1e-38 Score=370.18 Aligned_cols=214 Identities=24% Similarity=0.347 Sum_probs=185.1
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCcee--EEEEEcCcc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIE--GDIRISGFP 772 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~--G~i~~~g~~ 772 (1293)
++++|+++.. +++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+ |+|.++|.+
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~~ 70 (362)
T TIGR03258 6 IRIDHLRVAY-------------GANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADRD 70 (362)
T ss_pred EEEEEEEEEE-------------CCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCEE
Confidence 5666766543 445699999999999999999999999999999999998764 46 999999987
Q ss_pred CCh-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000773 773 KKQ-ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQ 851 (1293)
Q Consensus 773 ~~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 851 (1293)
... ...++.+|||+|+..++|.+||+||+.|....+ ..++++..++++++++.+||.+..++.++ +|||||
T Consensus 71 ~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~~-----~LSgGq 142 (362)
T TIGR03258 71 LTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLPA-----QLSGGM 142 (362)
T ss_pred CCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCChh-----hCCHHH
Confidence 643 123567999999999999999999999876433 23455556678999999999998888765 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 852 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 852 rqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|.+ |+++..
T Consensus 143 ~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~~ 220 (362)
T TIGR03258 143 QQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAAH 220 (362)
T ss_pred HHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 99999999999999999999999999999999999999999876 799999999975 67888999999985 899999
Q ss_pred CCCC
Q 000773 930 GPLG 933 (1293)
Q Consensus 930 g~~~ 933 (1293)
|+++
T Consensus 221 g~~~ 224 (362)
T TIGR03258 221 GEPQ 224 (362)
T ss_pred cCHH
Confidence 9864
No 78
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=368.94 Aligned_cols=208 Identities=25% Similarity=0.385 Sum_probs=179.1
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~l 795 (1293)
++++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.... ..++.+||++|++.++|.+
T Consensus 12 ~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~ 89 (353)
T PRK10851 12 FGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHM 89 (353)
T ss_pred eCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCHHHCCEEEEecCcccCCCC
Confidence 3456799999999999999999999999999999999998763 479999999876432 2346799999999999999
Q ss_pred CHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 796 TVKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
||+||+.|....... ...+.++..++++++++.++|.+..++.+. +|||||||||+|||||+.+|++|+|||||
T Consensus 90 tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgGq~QRvalArAL~~~P~llLLDEP~ 164 (353)
T PRK10851 90 TVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPA-----QLSGGQKQRVALARALAVEPQILLLDEPF 164 (353)
T ss_pred cHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999987543211 123445555678999999999988887755 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |++++.|+++
T Consensus 165 s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~~~ 222 (353)
T PRK10851 165 GALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGTPD 222 (353)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999999876 899999999975 67888999999985 8999999864
No 79
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-39 Score=342.19 Aligned_cols=207 Identities=25% Similarity=0.326 Sum_probs=176.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+.+|+|+||||||||+++|.++..|+ +|+|.++|.++.... .++.+|+++|+..++...||.||+.|..++
T Consensus 34 I~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLei 110 (339)
T COG1135 34 IFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLEL 110 (339)
T ss_pred EEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhh
Confidence 47899999999999999999999998 999999998876533 357899999999999999999999998876
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+..+ .+.++++.++|+.+||++.+|... .+|||||||||+
T Consensus 111 ag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~yP-----~qLSGGQKQRVa 151 (339)
T COG1135 111 AGVPK----------------------------------AEIKQRVAELLELVGLSDKADRYP-----AQLSGGQKQRVA 151 (339)
T ss_pred cCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccCc-----hhcCcchhhHHH
Confidence 54210 112446788999999998887655 569999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||||+.+|+||++|||||+|||.+...|+++|+++.++.|.||++++ |-++.+.+.|||+.+|++|++++.|+..++.
T Consensus 152 IARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlIT-HEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 152 IARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLIT-HEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEe-chHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999999999999999964 5578889999999999999999999998873
Q ss_pred HHHHhCCCCCCCCCChhhHHHHhc
Q 000773 235 EFFESCGFCCPERKGTADFLQEVT 258 (1293)
Q Consensus 235 ~~f~~~G~~~~~~~~~~~~~~~~~ 258 (1293)
..|++.-..+|+.+..
T Consensus 231 --------~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 231 --------ANPKHAITQEFIGETL 246 (339)
T ss_pred --------cCcchHHHHHHHHhhc
Confidence 3455555555555443
No 80
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=329.16 Aligned_cols=210 Identities=26% Similarity=0.393 Sum_probs=177.9
Q ss_pred ccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEc
Q 000773 711 KEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCE 786 (1293)
Q Consensus 711 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~ 786 (1293)
++++..|++.++|++||+++++||+++|+||||||||||||+|+|..++ .+|+|.++|.++.. ...++-++|||
T Consensus 7 ~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VP 84 (237)
T COG0410 7 ENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVP 84 (237)
T ss_pred EeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCc
Confidence 4455567889999999999999999999999999999999999998763 47999999998754 23456799999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVE-LESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
|...+||.|||+|||..++..+... +......+++.+.+- |.+.+++..| .|||||||.++|||||+.+|
T Consensus 85 egR~iF~~LTVeENL~~g~~~~~~~----~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 85 EGRRIFPRLTVEENLLLGAYARRDK----EAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred ccccchhhCcHHHHHhhhhhccccc----ccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCC
Confidence 9999999999999999876554321 111112567777775 5666777766 69999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
++|+|||||.||-|.-..+|.+.|++++++ |.||+++.+... ...+.+||..+|.+ |++++.|+.+
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~ 222 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAA 222 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHH
Confidence 999999999999999999999999999976 779999999865 46788999999985 9999999965
No 81
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-38 Score=345.40 Aligned_cols=202 Identities=29% Similarity=0.437 Sum_probs=171.0
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~l 795 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+
T Consensus 10 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~ 87 (213)
T cd03259 10 YGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHL 87 (213)
T ss_pred eCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCC
Confidence 344579999999999999999999999999999999999866 3579999999876431 2345799999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
|++||+.+..... ....++..++++++++.+|+.+..++.+. .||||||||++||+||+.+|++|+|||||+
T Consensus 88 tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al~~~p~~lllDEPt~ 159 (213)
T cd03259 88 TVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYPH-----ELSGGQQQRVALARALAREPSLLLLDEPLS 159 (213)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764322 12233334567889999999887777654 699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 876 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 160 ~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 160 ALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999998764 899999999975 56788999999985 8887654
No 82
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.9e-38 Score=364.02 Aligned_cols=205 Identities=23% Similarity=0.304 Sum_probs=179.4
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---cc----cceEEEEccCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---TF----ARISGYCEQND 789 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~~----~~~~~~v~q~~ 789 (1293)
++.+.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.++... .. ++.+|||+|++
T Consensus 3 ~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 3 TGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred cCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 4567799999999999999999999999999999999998763 589999999886531 22 56799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
.++|.+||+||+.+..... ..++++..+++.++++.+||.+..++.++ .|||||||||+|||||+.+|++|+
T Consensus 81 ~l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p~-----~LSGGq~QRV~lARAL~~~p~iLL 152 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYPD-----ELSGGMQQRVGLARALAAEPDILL 152 (363)
T ss_pred cCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999875442 23455556678999999999888887765 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||||++||+.++..+.+.++++.++ |+|||++||+++ ++...+|++++|.+ |+++..|+++
T Consensus 153 lDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 153 MDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 99999999999999999999999765 899999999975 57788999999975 8999999864
No 83
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=342.17 Aligned_cols=214 Identities=24% Similarity=0.371 Sum_probs=185.4
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.+++++|..+. +..+|+++|+++++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 467777776531 25799999999999999999999999999999999998774 4799999998854
Q ss_pred ----hhcccceEEEEccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 775 ----QETFARISGYCEQNDIH-SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 775 ----~~~~~~~~~~v~q~~~~-~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
....++.+|||+|++.. +-.-||.|.+.|+.... ..+.++..++++++++.+|+.+.+++.+. .|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~p~-----~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRPPF-----NLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCCcc-----ccCC
Confidence 34567889999999743 45679999999976432 34566778889999999999999888754 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |+|||++|||.+ .+...+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999887 789999999975 57788999999985 89999
Q ss_pred eCCC
Q 000773 929 SGPL 932 (1293)
Q Consensus 929 ~g~~ 932 (1293)
+|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 84
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-38 Score=344.72 Aligned_cols=200 Identities=27% Similarity=0.409 Sum_probs=172.1
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKE 799 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e 799 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 5699999999999999999999999999999999998653 47999999987642 3567999999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000773 800 SLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDA 879 (1293)
Q Consensus 800 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~ 879 (1293)
|+.+....+. ...++..+.++++++.+|+.+..++.++ +||||||||++||+||+.+|++++|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYPH-----QLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988654321 2233334567899999999887777654 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeec-CcEEEEeCCC
Q 000773 880 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGQVIYSGPL 932 (1293)
Q Consensus 880 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~-~G~~~~~g~~ 932 (1293)
.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ +|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999975 56778999999984 4899988775
No 85
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-38 Score=316.43 Aligned_cols=227 Identities=26% Similarity=0.400 Sum_probs=186.4
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++.+|++|++ .++++|++||++++|||++||+||||||||||||.|+|...+ .+|++.+||.+..
T Consensus 2 i~a~nls~~~-------------~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSL-------------AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEe-------------ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 3556777766 357899999999999999999999999999999999998764 4799999999875
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000773 775 Q---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQ 851 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 851 (1293)
. ....+.-+.+||+..+-...||+|-+.++........ ...+..+.++++++..++.+++.+... .|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~-~~~e~~~i~~~ala~~d~~~la~R~y~-----~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRSGR-EPEEDERIAAQALAATDLSGLAGRDYR-----TLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcccccccCC-CchhhHHHHHHHHHHcChhhhhccchh-----hcCchH
Confidence 4 2345667899999998888899999998754322212 222344557899999999998877654 799999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 852 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 852 rqrv~ia~aL~~------~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
||||.+||.|++ ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...++|++++|.+ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 456999999999999999999999999999999999999999884 6778999999975 99
Q ss_pred EEEeCCCCC--ChhHHHHHHH
Q 000773 926 VIYSGPLGR--NSHKVIEYYE 944 (1293)
Q Consensus 926 ~~~~g~~~~--~~~~~~~~~~ 944 (1293)
++..|++.+ ..+.+...|.
T Consensus 219 v~a~g~p~~vlt~Etl~~vyg 239 (259)
T COG4559 219 VIASGSPQDVLTDETLERVYG 239 (259)
T ss_pred EeecCCHHHhcCHHHHHHHhC
Confidence 999999864 2334444553
No 86
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.5e-38 Score=367.18 Aligned_cols=214 Identities=22% Similarity=0.325 Sum_probs=185.0
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 15 L~l~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i~ 79 (375)
T PRK09452 15 VELRGISKSF-------------DGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDIT 79 (375)
T ss_pred EEEEEEEEEE-------------CCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 6677776543 345699999999999999999999999999999999998763 5899999998764
Q ss_pred h-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000773 775 Q-ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRK 853 (1293)
Q Consensus 775 ~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 853 (1293)
. ...++.+||++|++.++|.+||+||+.|+...+ ..+..+..++++++++.+||.+..++.+. +|||||||
T Consensus 80 ~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p~-----~LSgGq~Q 151 (375)
T PRK09452 80 HVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKPH-----QLSGGQQQ 151 (375)
T ss_pred CCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHH
Confidence 3 223567999999999999999999999875432 23445555678999999999998888765 79999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 854 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 854 rv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|.+ |+++..|++
T Consensus 152 RVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~~ 229 (375)
T PRK09452 152 RVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGTP 229 (375)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999999865 999999999975 67889999999985 999999986
Q ss_pred C
Q 000773 933 G 933 (1293)
Q Consensus 933 ~ 933 (1293)
.
T Consensus 230 ~ 230 (375)
T PRK09452 230 R 230 (375)
T ss_pred H
Confidence 3
No 87
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.8e-38 Score=343.33 Aligned_cols=194 Identities=26% Similarity=0.329 Sum_probs=166.2
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~~ 793 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... .+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 4599999999999999999999999999999999998663 479999999875321 23567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+||+||+.+....+. ...++..++++++++.+|+.+..++.++ +||||||||++||+||+.+|++|+||||
T Consensus 94 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEP 165 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALPM-----QLSGGEQQRVAIARAIVHKPPLLLADEP 165 (216)
T ss_pred cccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988654321 2233344567899999999887777654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
|+|||+.++..+.+.|++++++|+|||++||+++ .+...+|++++|.+ |+
T Consensus 166 t~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 166 TGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999975 56678899999975 65
No 88
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.6e-38 Score=360.64 Aligned_cols=204 Identities=27% Similarity=0.391 Sum_probs=175.2
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ 794 (1293)
++++.+|+||||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++.
T Consensus 14 ~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (303)
T TIGR01288 14 YGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPE 91 (303)
T ss_pred eCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcccHHHHhhcEEEEeccccCCcC
Confidence 3456799999999999999999999999999999999998763 47999999987532 2245679999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+||+||+.+.+.... .+.++...+++++++.+++.+..++.++ +||||||||++||+||+.+|++|+|||||
T Consensus 92 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt 163 (303)
T TIGR01288 92 FTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRVA-----LLSGGMKRRLTLARALINDPQLLILDEPT 163 (303)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999986543321 2333334557789999999888787765 69999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 219 (303)
T TIGR01288 164 TGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGRP 219 (303)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999878999999999975 57788999999985 899999885
No 89
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-38 Score=341.81 Aligned_cols=200 Identities=26% Similarity=0.439 Sum_probs=171.0
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
+++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..++.++|++|++.+++.+|+
T Consensus 11 ~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv 87 (210)
T cd03269 11 GRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKV 87 (210)
T ss_pred CCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcH
Confidence 34569999999999999999999999999999999999865 358999999987643 345679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
+||+.+....+. ....+..+.++++++.+|+.+..++.+. +||||||||++||++|+.+|++++|||||+||
T Consensus 88 ~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~~lllDEP~~~L 159 (210)
T cd03269 88 IDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRVE-----ELSKGNQQKVQFIAAVIHDPELLILDEPFSGL 159 (210)
T ss_pred HHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcHh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999987654331 2233344567899999999887776654 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 878 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
|+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 160 D~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 160 DPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 999999999999998877899999999975 56678999999985 8887654
No 90
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=327.85 Aligned_cols=194 Identities=26% Similarity=0.377 Sum_probs=170.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.. .++.+|||-|+..+||++||.||+.+...+.+.
T Consensus 29 f~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w 105 (309)
T COG1125 29 FLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGW 105 (309)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCC
Confidence 47899999999999999999999998 999999999987654 468899999999999999999999987665432
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
. .. +.+++++++|+.+||+.. ...++++++|||||+|||.+||
T Consensus 106 ~--------------------k~--------------~i~~r~~ELl~lvgL~p~---~~~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 106 D--------------------KE--------------RIKKRADELLDLVGLDPS---EYADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred C--------------------HH--------------HHHHHHHHHHHHhCCCHH---HHhhcCchhcCcchhhHHHHHH
Confidence 1 11 123457889999999741 1234566789999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
||+.+|++++||||+++|||.++..+.+.++++.++-++|||++ +|+.+|+++++|||++|++|+++..+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfV-THDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFV-THDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEE-ecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999899999996 678899999999999999999999999999864
No 91
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-38 Score=344.40 Aligned_cols=204 Identities=27% Similarity=0.366 Sum_probs=173.9
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ 794 (1293)
++++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 10 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 87 (220)
T cd03265 10 YGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDE 87 (220)
T ss_pred ECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCcChHHHhhcEEEecCCcccccc
Confidence 3456799999999999999999999999999999999998653 48999999976532 2334679999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+||+||+.+....+. ...++...+++++++.+|+.+..++.++ .||||||||++||+||+.+|++++|||||
T Consensus 88 ~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr~~la~al~~~p~llllDEPt 159 (220)
T cd03265 88 LTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLVK-----TYSGGMRRRLEIARSLVHRPEVLFLDEPT 159 (220)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999988654321 2233344567899999999887777655 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|++
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 160 IGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999876 899999999975 56778999999975 899988764
No 92
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-38 Score=343.29 Aligned_cols=196 Identities=31% Similarity=0.427 Sum_probs=167.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc---cceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP---QKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.++||||.+...+.+||+|.+.+|..-..
T Consensus 30 i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~- 105 (258)
T COG1120 30 ITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHL- 105 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCccc-
Confidence 58999999999999999999999988 9999999999876543 4679999999888889999999998753210
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
.... .+.+ +.++.++..|+.+|+.+.+++.+.+ |||||||||.|||
T Consensus 106 -------~~~~-------~~~~---------------~D~~~v~~aL~~~~~~~la~r~~~~-----LSGGerQrv~iAr 151 (258)
T COG1120 106 -------GLFG-------RPSK---------------EDEEIVEEALELLGLEHLADRPVDE-----LSGGERQRVLIAR 151 (258)
T ss_pred -------cccc-------CCCH---------------hHHHHHHHHHHHhCcHHHhcCcccc-----cChhHHHHHHHHH
Confidence 0000 0001 1123577789999999999998865 9999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
||+++|++++||||||+||...+.++++.++++++++|+|+|+++| +.+.+.++||++++|++|+++.+|++++++.
T Consensus 152 ALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlH-DlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 152 ALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLH-DLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEec-CHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999888999999865 5578999999999999999999999988753
No 93
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-38 Score=365.62 Aligned_cols=215 Identities=23% Similarity=0.370 Sum_probs=184.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++... +++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~-------------~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSF-------------DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 36677776543 345699999999999999999999999999999999998763 479999999876
Q ss_pred Ch-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000773 774 KQ-ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 774 ~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 852 (1293)
.. ...++.+||++|++.++|++||.||+.|....+ ..++++..++++++++.+++.+..++.+. +||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~~-----~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKPH-----QLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHH
Confidence 43 234577999999999999999999999875433 23455556678999999999988887755 7999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGP 931 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~ 931 (1293)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|.+ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998654 899999999975 67889999999985 89999998
Q ss_pred CC
Q 000773 932 LG 933 (1293)
Q Consensus 932 ~~ 933 (1293)
++
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 64
No 94
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.9e-38 Score=341.26 Aligned_cols=201 Identities=27% Similarity=0.398 Sum_probs=171.2
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lT 796 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++.+|
T Consensus 11 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (213)
T cd03301 11 GNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMT 88 (213)
T ss_pred CCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCcCCcccceEEEEecChhhccCCC
Confidence 445699999999999999999999999999999999998653 579999999876432 22457999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
++||+.+....+ ....++..++++++++.+|+.+..++.++ .||||||||++||+||+.+|++++|||||+|
T Consensus 89 v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr~~laral~~~p~llllDEPt~~ 160 (213)
T cd03301 89 VYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKPK-----QLSGGQRQRVALGRAIVREPKVFLMDEPLSN 160 (213)
T ss_pred HHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999998764332 12334444567889999999887777654 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 877 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 161 LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 161 LDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 9999999999999999864 899999999975 56778999999975 8888765
No 95
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-38 Score=310.78 Aligned_cols=191 Identities=25% Similarity=0.383 Sum_probs=167.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
++||+||||||||||||+|+|...|. +|+|.+||++.+... .++-+++++|++.+|..+||.+|+.+|..--.
T Consensus 27 ~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~L--- 100 (231)
T COG3840 27 IVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPGL--- 100 (231)
T ss_pred EEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCCccc---
Confidence 48999999999999999999999998 999999999876543 46779999999999999999999988754110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
++. .+.++.++.++...||..+.++..+. |||||||||+|||+|
T Consensus 101 ------kL~-------------------------a~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGqRQRvALARcl 144 (231)
T COG3840 101 ------KLN-------------------------AEQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQRQRVALARCL 144 (231)
T ss_pred ------ccC-------------------------HHHHHHHHHHHHHhChhhHhhhCccc-----cCchHHHHHHHHHHH
Confidence 000 11234467789999999988887765 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+-+|++||||+|+|||.-+.++..++.+++++++.|+++++||| +++.+.+|+++++++|+|.++|+.++..
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~-~Da~~ia~~~~fl~~Gri~~~g~~~~~~ 218 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHP-EDAARIADRVVFLDNGRIAAQGSTQELL 218 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCH-HHHHHhhhceEEEeCCEEEeeccHHHHh
Confidence 9999999999999999999999999999999999999999998887 4788999999999999999999988864
No 96
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7.2e-38 Score=358.32 Aligned_cols=204 Identities=24% Similarity=0.389 Sum_probs=177.2
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSP 793 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~ 793 (1293)
+++++.+|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++
T Consensus 11 ~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~ 88 (301)
T TIGR03522 11 LYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYL 88 (301)
T ss_pred EECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccChHHHHhceEEecCCCCCCC
Confidence 3445679999999999999999999999999999999999876 358999999987643 234567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+||.||+.+.+.++. .+.++..++++++++.+|+.+..++.++ .||||||||++||+||+++|++|+||||
T Consensus 89 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~lliLDEP 160 (301)
T TIGR03522 89 DMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKIG-----QLSKGYRQRVGLAQALIHDPKVLILDEP 160 (301)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999998765432 2334444567899999999988887765 6999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 161 t~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 161 TTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred cccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999865 799999999975 67888999999985 899999986
No 97
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.7e-38 Score=366.96 Aligned_cols=208 Identities=28% Similarity=0.365 Sum_probs=177.4
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~ 792 (1293)
+++++.+|+|+||++++||+++|+||||||||||||+|+|..++ .+|+|.++|.+... ...++.+||++|++.++
T Consensus 12 ~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~ 89 (402)
T PRK09536 12 EFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDVEALSARAASRRVASVPQDTSLS 89 (402)
T ss_pred EECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEcCcCCHHHHhcceEEEccCCCCC
Confidence 34567799999999999999999999999999999999998763 58999999987643 34567799999999999
Q ss_pred CCCCHHHHHHHHHHhcC--CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 793 PQVTVKESLIYSAFLRL--AKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+.+||+||+.+...... ..... ++..++++++++.+|+.+..++.+. +||||||||++|||||+++|++|+|
T Consensus 90 ~~~tv~e~v~~~~~~~~~~~~~~~-~~~~~~v~~~le~vgl~~~~~~~~~-----~LSgGerQRv~IArAL~~~P~iLLL 163 (402)
T PRK09536 90 FEFDVRQVVEMGRTPHRSRFDTWT-ETDRAAVERAMERTGVAQFADRPVT-----SLSGGERQRVLLARALAQATPVLLL 163 (402)
T ss_pred CCCCHHHHHHhccchhcccccCCC-HHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999987532111 01112 2334568899999999988887755 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||||+|||+.++..++++|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+++
T Consensus 164 DEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G~~~ 224 (402)
T PRK09536 164 DEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAGPPA 224 (402)
T ss_pred ECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 9999999999999999999999877999999999976 57788999999985 8999999865
No 98
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-37 Score=346.57 Aligned_cols=206 Identities=27% Similarity=0.389 Sum_probs=172.8
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lT 796 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++.+|
T Consensus 13 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t 90 (239)
T cd03296 13 GDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMT 90 (239)
T ss_pred CCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCcCCccccceEEEecCCcccCCCC
Confidence 345699999999999999999999999999999999998653 579999999875432 22456999999999999999
Q ss_pred HHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 797 VKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 797 v~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
|+||+.+....+.. .....++..++++++++.+|+.+..++.++ +||||||||++||+||+.+|++|+|||||+
T Consensus 91 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEP~~ 165 (239)
T cd03296 91 VFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPA-----QLSGGQRQRVALARALAVEPKVLLLDEPFG 165 (239)
T ss_pred HHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999876433211 001223334557889999999877777654 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 876 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 166 ~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 221 (239)
T cd03296 166 ALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGTP 221 (239)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecCH
Confidence 99999999999999999875 899999999975 56788999999975 899998875
No 99
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-38 Score=365.60 Aligned_cols=205 Identities=26% Similarity=0.365 Sum_probs=177.3
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~l 795 (1293)
++++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 13 ~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~ 90 (369)
T PRK11000 13 YGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHL 90 (369)
T ss_pred eCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECCCCCHhHCCEEEEeCCcccCCCC
Confidence 3445699999999999999999999999999999999998763 479999999876431 2346799999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
||+||+.|....+ ..+.++..++++++++.+|+.+..++.+. +|||||||||+|||||+.+|++|+|||||+
T Consensus 91 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~~-----~LSgGq~QRvaLAraL~~~P~lLLLDEPts 162 (369)
T PRK11000 91 SVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKPK-----ALSGGQRQRVAIGRTLVAEPSVFLLDEPLS 162 (369)
T ss_pred CHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 9999999875432 12344445678999999999988887765 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 876 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|.+ |+++..|+++
T Consensus 163 ~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~~ 219 (369)
T PRK11000 163 NLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKPL 219 (369)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999998765 899999999975 67788999999985 8999999864
No 100
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.2e-37 Score=345.99 Aligned_cols=207 Identities=28% Similarity=0.388 Sum_probs=173.5
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c-ccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T-FARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~ 87 (236)
T cd03219 10 FGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLF 87 (236)
T ss_pred ECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccc
Confidence 344569999999999999999999999999999999999865 3479999999876431 1 234689999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 793 PQVTVKESLIYSAFLRLAKE-------VSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~-------~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
+.+||+||+.+......... ...++....++++++.+|+.+..++.++ .|||||||||+||+||+.+|
T Consensus 88 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p 162 (236)
T cd03219 88 PELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAG-----ELSYGQQRRLEIARALATDP 162 (236)
T ss_pred cCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChh-----hCCHHHHHHHHHHHHHhcCC
Confidence 99999999988654321110 0123334567899999999887777654 79999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 163 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 163 KLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 999999999999999999999999999877999999999975 56778999999985 899988875
No 101
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.2e-37 Score=341.56 Aligned_cols=198 Identities=30% Similarity=0.488 Sum_probs=170.7
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCHH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVTVK 798 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lTv~ 798 (1293)
.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 699999999999999999999999999999999998653 47999999987643 23456799999999999999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000773 799 ESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLD 878 (1293)
Q Consensus 799 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD 878 (1293)
||+.+....+ ....++...+++++++.+|+.+..++.++ .||||||||++||+||+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRVG-----GFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhhh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 9998765432 12334445567899999999887777655 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 879 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 879 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999777999999999975 57778999999985 8887654
No 102
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=361.42 Aligned_cols=202 Identities=24% Similarity=0.327 Sum_probs=174.6
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~~ 793 (1293)
+.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.+||++|++.+++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~ 95 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCC
Confidence 5699999999999999999999999999999999998763 579999999876421 23567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+||+||+.+..... ..+.++..++++++++.+|+.+..++.+. +|||||||||+|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~qRv~lAraL~~~p~iLlLDEP 167 (343)
T PRK11153 96 SRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYPA-----QLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred CCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 999999998875432 12344444568899999999888777654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+|||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.+
T Consensus 168 ts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~~~g~~~ 226 (343)
T PRK11153 168 TSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLVEQGTVS 226 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999999765 899999999975 56778999999985 8999998753
No 103
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-37 Score=344.18 Aligned_cols=205 Identities=25% Similarity=0.368 Sum_probs=174.0
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c-ccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T-FARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++.++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 87 (232)
T cd03218 10 YGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITKLPMHKRARLGIGYLPQEASIF 87 (232)
T ss_pred eCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccCCHhHHHhccEEEecCCcccc
Confidence 3455799999999999999999999999999999999998663 479999999875321 1 234689999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+||+||+.+....+. ...++...+++++++.+|+.+..++.+. .||||||||++||+||+.+|++|+|||
T Consensus 88 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDE 159 (232)
T cd03218 88 RKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKAS-----SLSGGERRRVEIARALATNPKFLLLDE 159 (232)
T ss_pred ccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999987643321 2233344567899999999887777654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|+.+
T Consensus 160 Pt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 218 (232)
T cd03218 160 PFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGTPE 218 (232)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeCHH
Confidence 99999999999999999999877999999999975 67888999999975 8999888753
No 104
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.3e-37 Score=343.25 Aligned_cols=206 Identities=25% Similarity=0.294 Sum_probs=171.4
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCC-----CCCceeEEEEEcCccCCh-----hcccceEEEEc
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRK-----TGGYIEGDIRISGFPKKQ-----ETFARISGYCE 786 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~-----~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~ 786 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.+... ...++.++|++
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~ 87 (227)
T cd03260 10 YGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVF 87 (227)
T ss_pred cCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEe
Confidence 34557999999999999999999999999999999999976 4 458999999987532 23456799999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
|++.++ .+||+||+.+....+. ....++..++++++++.+|+.+..++... +.+||||||||++||+||+.+|+
T Consensus 88 q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~ 161 (227)
T cd03260 88 QKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPE 161 (227)
T ss_pred cCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCC
Confidence 999888 8999999987654321 11222234567889999999876665431 24799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|+|||||+|||+.++..+.+.|++++++ +|||++||+++ ++.+.+|++++|.+ |++++.|+.+
T Consensus 162 llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 225 (227)
T cd03260 162 VLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPTE 225 (227)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCcc
Confidence 99999999999999999999999999876 99999999975 56778999999985 8999988753
No 105
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.2e-37 Score=338.80 Aligned_cols=197 Identities=29% Similarity=0.430 Sum_probs=168.8
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-hcccceEEEEccCCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 11 ~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (208)
T cd03268 11 GKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLT 88 (208)
T ss_pred CCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCc
Confidence 34579999999999999999999999999999999999865 358999999987543 233467999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
|+||+.+....+. .. .++++++++.+++.+..++.++ .|||||||||+||++|+.+|++++|||||+|
T Consensus 89 v~e~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~ 156 (208)
T cd03268 89 ARENLRLLARLLG---IR----KKRIDEVLDVVGLKDSAKKKVK-----GFSLGMKQRLGIALALLGNPDLLILDEPTNG 156 (208)
T ss_pred HHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHhhhHh-----hCCHHHHHHHHHHHHHhcCCCEEEECCCccc
Confidence 9999987654321 11 2346789999999887777655 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 877 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 157 LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 157 LDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999998877899999999975 56678999999985 8888754
No 106
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9e-38 Score=338.74 Aligned_cols=196 Identities=30% Similarity=0.399 Sum_probs=164.6
Q ss_pred cccc-cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCC-CCC
Q 000773 716 AEDK-LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDI-HSP 793 (1293)
Q Consensus 716 ~~~~-~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~-~~~ 793 (1293)
.+++ +.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.++|++|++. .+.
T Consensus 8 ~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 85 (205)
T cd03226 8 SYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLF 85 (205)
T ss_pred EeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhh
Confidence 3344 679999999999999999999999999999999999866 358999999987644344567999999974 345
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+|++||+.+..... . .+ ..+++++++.+|+.+..++.++ .||||||||++|||||+.+|++|+||||
T Consensus 86 ~~tv~e~l~~~~~~~---~--~~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEP 153 (205)
T cd03226 86 TDSVREELLLGLKEL---D--AG--NEQAETVLKDLDLYALKERHPL-----SLSGGQKQRLAIAAALLSGKDLLIFDEP 153 (205)
T ss_pred hccHHHHHhhhhhhc---C--cc--HHHHHHHHHHcCCchhcCCCch-----hCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 679999998754321 1 11 1347889999999887777654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI 927 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~ 927 (1293)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 154 t~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 154 TSGLDYKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 9999999999999999999777999999999975 56678999999985 7764
No 107
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=350.20 Aligned_cols=211 Identities=22% Similarity=0.284 Sum_probs=178.8
Q ss_pred cccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c----ccceE
Q 000773 710 MKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T----FARIS 782 (1293)
Q Consensus 710 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~ 782 (1293)
.+++.+.++++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.+
T Consensus 27 ~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 27 KEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcE
Confidence 34566677888899999999999999999999999999999999998763 479999999875421 1 13569
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000773 783 GYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELV 862 (1293)
Q Consensus 783 ~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~ 862 (1293)
+|++|++.+++.+||+||+.+..... .....+..++++++++.+|+.+..++.++ +||||||||++||+||+
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~lAral~ 176 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYPD-----ELSGGMQQRVGLARALA 176 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCcc-----cCCHHHHHHHHHHHHHh
Confidence 99999999999999999998865332 12233344567889999999887777765 79999999999999999
Q ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 863 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 863 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 177 ~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 177 VDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999998754 899999999975 56778999999975 899988875
No 108
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.3e-37 Score=341.28 Aligned_cols=193 Identities=30% Similarity=0.431 Sum_probs=164.5
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------c-ccceEEEEccCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------T-FARISGYCEQNDIHS 792 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~-~~~~~~~v~q~~~~~ 792 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 569999999999999999999999999999999999876 3579999999875421 1 245799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+||+||+.+....+. ....+..++++++++.+|+.+..++.++ .||||||||++||+||+.+|++|+|||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYPS-----ELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcChh-----hcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998654331 2233334567899999999887777654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 873 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
||+|||+.++..+.+.|+++++ +|+|||++||+++ ++ +.+|++++|.+ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999987 5899999999975 34 48999999975 65
No 109
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-38 Score=350.85 Aligned_cols=192 Identities=27% Similarity=0.392 Sum_probs=171.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-cceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-QKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++++..+ +|.+++|+|+..++|.+||+||+.|+.+.++...
T Consensus 31 f~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k 107 (338)
T COG3839 31 FVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGVPK 107 (338)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCCch
Confidence 36899999999999999999999998 9999999999998654 5789999999999999999999999988754210
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.+.+++++++.+.|+|++..|++.. +|||||||||+|||||
T Consensus 108 ----------------------------------~ei~~rV~eva~~L~l~~lL~r~P~-----~LSGGQrQRVAlaRAl 148 (338)
T COG3839 108 ----------------------------------AEIDKRVKEVAKLLGLEHLLNRKPL-----QLSGGQRQRVALARAL 148 (338)
T ss_pred ----------------------------------HHHHHHHHHHHHHcCChhHHhcCcc-----cCChhhHHHHHHHHHH
Confidence 1123457888999999999988764 5999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
+.+|++++||||+|.||+..+..+...|+++.++.+.|+|.+ +|+..|+..++|||++|++|++...|++.++.+
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYV-THDq~EAmtladri~Vm~~G~i~Q~g~p~ely~ 223 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYV-THDQVEAMTLADRIVVMNDGRIQQVGTPLELYE 223 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEE-cCCHHHHHhhCCEEEEEeCCeeeecCChHHHhh
Confidence 999999999999999999999999999999988888899986 566779999999999999999999999999843
No 110
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.6e-37 Score=337.71 Aligned_cols=221 Identities=37% Similarity=0.630 Sum_probs=179.4
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC-CceeEEEEEcCccC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG-GYIEGDIRISGFPK 773 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~-~~~~G~i~~~g~~~ 773 (1293)
+.|+|+++..... .+.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 3567776654311 0136799999999999999999999999999999999997651 13579999999876
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000773 774 KQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEE-VMDLVELESLKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 774 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~l~~~~~~~~~~~~~~~lSgGer 852 (1293)
.....++.++|++|++.+++.+||+||+.+............+....++++ .++.+++.+..++.++ .||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVK-----GISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccccc-----CcCHHHH
Confidence 544456779999999999999999999998654332221122222233455 8899999877766544 7999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|+|+++|++..++.+.+|++++|.+ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998877899999999975468899999999985 8988765
No 111
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-38 Score=333.64 Aligned_cols=194 Identities=26% Similarity=0.429 Sum_probs=166.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCc---ccCCc-cccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGY---RLNEF-VPQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~---~~~~~-~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
++|++|||||||||||++|+|+..|+ +|.|.+||+ +.++. ...+.+|||+|+..+|+.|||.|||.||.+.+.
T Consensus 30 ~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~ 106 (345)
T COG1118 30 LVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRK 106 (345)
T ss_pred EEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhhcccccc
Confidence 47999999999999999999999998 999999999 55542 234789999999999999999999999987652
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. + + ++ .+.+..++++|+.++|++..++ ++.+|||||||||+||
T Consensus 107 ~--~---p-------------~~--------------~~~r~rv~elL~lvqL~~la~r-----yP~QLSGGQrQRVALA 149 (345)
T COG1118 107 E--R---P-------------SE--------------AEIRARVEELLRLVQLEGLADR-----YPAQLSGGQRQRVALA 149 (345)
T ss_pred c--C---C-------------Ch--------------hhHHHHHHHHHHHhcccchhhc-----CchhcChHHHHHHHHH
Confidence 1 0 0 00 1224457788999999886664 5567999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|||+..|++|+||||+++||++.+.++-++|+++.++.|.|++++ +|+..|+++++|||++|++|+|...|++.|+.+
T Consensus 150 RALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfV-THD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 150 RALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFV-THDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEE-eCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 999999999999999999999999999999999988778888886 567789999999999999999999999999843
No 112
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-37 Score=345.34 Aligned_cols=205 Identities=27% Similarity=0.363 Sum_probs=170.6
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQNDIHSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~~~~ 793 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 5799999999999999999999999999999999998653 47999999987542 123567999999999999
Q ss_pred CCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 794 QVTVKESLIYSAFLRL-----AKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
.+||+||+.+...... ......++..+++.++++.+++.+..++.+. +|||||||||+||+||+.+|++|
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRAD-----QLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcc-----cCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999986532110 0011112233557889999999877666544 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |++++.|+.+
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 230 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPPA 230 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCHH
Confidence 999999999999999999999999764 899999999976 56678999999985 8999988753
No 113
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=306.12 Aligned_cols=200 Identities=27% Similarity=0.395 Sum_probs=176.4
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKES 800 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~ 800 (1293)
.+|+|+|++|.+||.++++||||||||||||+++|..++ ..|+|.+||+++....- .-|.|+|++.++|.+||.||
T Consensus 19 ~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~dN 94 (259)
T COG4525 19 SALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVIDN 94 (259)
T ss_pred hhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCc--cceeEeccCccchhhHHHHH
Confidence 499999999999999999999999999999999998774 57999999998754322 23899999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000773 801 LIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 880 (1293)
Q Consensus 801 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~ 880 (1293)
+.|+..++ ...+.++.+++.+.+..+||.+..++.+- +|||||||||.|||||+.+|++|+||||++.||.-
T Consensus 95 vafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~-----qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~ 166 (259)
T COG4525 95 VAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYIW-----QLSGGMRQRVGIARALAVEPQLLLLDEPFGALDAL 166 (259)
T ss_pred HHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccceE-----eecchHHHHHHHHHHhhcCcceEeecCchhhHHHH
Confidence 99998876 46678888889999999999998887765 79999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeec-CcEEEEeCCCC
Q 000773 881 AAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGQVIYSGPLG 933 (1293)
Q Consensus 881 ~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~-~G~~~~~g~~~ 933 (1293)
++++++++|-++.+ .|+.++++||+.+ |..-.++++++|+. .|+|+..-+++
T Consensus 167 tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 167 TREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999988765 4999999999976 55567899999974 36888776654
No 114
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-37 Score=342.00 Aligned_cols=200 Identities=27% Similarity=0.347 Sum_probs=171.8
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCCCCCCC
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~~~ 794 (1293)
.+|+++||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 799999999999999999999999999999999998763 579999999875421 234679999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+|++||+.+....+. ....+....++++++.+|+.+..++.+. .||||||||++||+||+.+|++++|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYPA-----QLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcChh-----hCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999987654321 2333344567899999999887777654 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999775 899999999975 56678999999975 899988874
No 115
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=333.27 Aligned_cols=193 Identities=28% Similarity=0.425 Sum_probs=162.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccc---cccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQN---DVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~---~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+|+|+|+++|. +|+|.++|.+......+.++|||||. |+-|| +||+|.+..+...+.
T Consensus 32 ~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~- 106 (254)
T COG1121 32 ITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKK- 106 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cCHHHHHHccCcccc-
Confidence 58999999999999999999999988 99999999887766556789999995 44454 599999988632211
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
...+.. . .+.++.+++.|+.+|+.+.+|+.+|+ |||||+|||.|||
T Consensus 107 -g~~~~~-------------~---------------~~d~~~v~~aL~~Vgm~~~~~r~i~~-----LSGGQ~QRV~lAR 152 (254)
T COG1121 107 -GWFRRL-------------N---------------KKDKEKVDEALERVGMEDLRDRQIGE-----LSGGQKQRVLLAR 152 (254)
T ss_pred -cccccc-------------c---------------HHHHHHHHHHHHHcCchhhhCCcccc-----cCcHHHHHHHHHH
Confidence 001000 0 01134578899999999999999997 9999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
||+++|++|+|||||+|+|+.++..+.++|+++.++ |+||+++ ||+...+.++||+|++| ++++++.|+++++.+
T Consensus 153 AL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~v-tHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~~ 227 (254)
T COG1121 153 ALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLMV-THDLGLVMAYFDRVICL-NRHLIASGPPEEVLT 227 (254)
T ss_pred HhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEE-eCCcHHhHhhCCEEEEE-cCeeEeccChhhccC
Confidence 999999999999999999999999999999999886 9999996 77788999999999999 667899999988754
No 116
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.9e-37 Score=339.04 Aligned_cols=200 Identities=26% Similarity=0.420 Sum_probs=171.4
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 569999999999999999999999999999999999865 358999999987642 2345679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
+||+.+....+. ...++..++++++++.+++.+..++.++ .||||||||++||+||+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRAR-----TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChhh-----hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999987654331 2233334567899999999887777654 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 878 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|.+ |++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999876 599999999975 46678999999975 899988875
No 117
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.3e-37 Score=342.07 Aligned_cols=204 Identities=23% Similarity=0.360 Sum_probs=173.3
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-----hcccceEEEEccCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-----ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~~~ 792 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.++
T Consensus 12 ~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 89 (240)
T PRK09493 12 GPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLF 89 (240)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccC
Confidence 34569999999999999999999999999999999999865 357999999987642 23356799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+||+||+.+...... ....++..+++.++++.+|+.+..++.+. .||||||||++||+||+.+|++++|||
T Consensus 90 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDE 162 (240)
T PRK09493 90 PHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYPS-----ELSGGQQQRVAIARALAVKPKLMLFDE 162 (240)
T ss_pred CCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcChh-----hcCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999999987542111 12334444567899999999877776654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 163 P~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (240)
T PRK09493 163 PTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAEDGDP 220 (240)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeCCH
Confidence 99999999999999999999877999999999975 56678999999985 899998875
No 118
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-37 Score=338.41 Aligned_cols=216 Identities=24% Similarity=0.348 Sum_probs=176.4
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++..... ...+.+|+++||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~ 74 (233)
T PRK11629 6 LQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMS 74 (233)
T ss_pred EEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcC
Confidence 6777777654210 001469999999999999999999999999999999999865 35899999998764
Q ss_pred hhc------c-cceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000773 775 QET------F-ARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGL 847 (1293)
Q Consensus 775 ~~~------~-~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 847 (1293)
... . ++.++|++|++.+++.+|++||+.+..... ....++..++++++++.+|+.+..++.+. +|
T Consensus 75 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~L 146 (233)
T PRK11629 75 KLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRPS-----EL 146 (233)
T ss_pred cCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hC
Confidence 311 1 256999999999999999999998864332 12233444568899999999887776654 79
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEE
Q 000773 848 SIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQV 926 (1293)
Q Consensus 848 SgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~ 926 (1293)
|||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ ....+|++++|. +|++
T Consensus 147 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~-~G~i 223 (233)
T PRK11629 147 SGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMR-DGRL 223 (233)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEE-CCEE
Confidence 99999999999999999999999999999999999999999999875 5899999999974 345578998887 4899
Q ss_pred EEeCCC
Q 000773 927 IYSGPL 932 (1293)
Q Consensus 927 ~~~g~~ 932 (1293)
+..++.
T Consensus 224 ~~~~~~ 229 (233)
T PRK11629 224 TAELSL 229 (233)
T ss_pred EEEecc
Confidence 988774
No 119
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-37 Score=342.30 Aligned_cols=202 Identities=28% Similarity=0.385 Sum_probs=171.7
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+.++|++|++.+++.+||
T Consensus 12 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv 87 (255)
T PRK11248 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNV 87 (255)
T ss_pred CCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcH
Confidence 345699999999999999999999999999999999998653 47999999987643 23458999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
+||+.+....+ .....+...++.++++.+|+.+..++.+. .||||||||++||+||+.+|++|+|||||+||
T Consensus 88 ~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qrl~laral~~~p~lllLDEPt~~L 159 (255)
T PRK11248 88 QDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYIW-----QLSGGQRQRVGIARALAANPQLLLLDEPFGAL 159 (255)
T ss_pred HHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 99998764322 12333444568899999999877776544 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeec-CcEEEEeCCC
Q 000773 878 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGQVIYSGPL 932 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~-~G~~~~~g~~ 932 (1293)
|+.++..+.+.|+++++ +|+|||++||+++ ++...+|++++|.+ +|+++..++.
T Consensus 160 D~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 160 DAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999854 5899999999975 57788999999974 5899887765
No 120
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-37 Score=350.02 Aligned_cols=195 Identities=32% Similarity=0.487 Sum_probs=169.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCC--ccccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNE--FVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~--~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++++||||||||||+|+|+|+++|+ +|+|.++|.+... ...++.+||+||++.+++.+||+|++.|.+.+++..
T Consensus 33 i~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~ 109 (293)
T COG1131 33 IFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLS 109 (293)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCC
Confidence 57999999999999999999999997 9999999988765 344678999999999999999999999998876532
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.. ..++.++++++.+||.+..+++++ +||+|||||++||+|
T Consensus 110 ~~----------------------------------~~~~~~~~~l~~~~L~~~~~~~~~-----~lS~G~kqrl~ia~a 150 (293)
T COG1131 110 KE----------------------------------EAEERIEELLELFGLEDKANKKVR-----TLSGGMKQRLSIALA 150 (293)
T ss_pred hh----------------------------------HHHHHHHHHHHHcCCchhhCcchh-----hcCHHHHHHHHHHHH
Confidence 10 012346789999999985566665 599999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFE 238 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~ 238 (1293)
|+++|+++||||||+|||+.++.++++.|++++++.++||++++ |..+++.++||+|++|++|++++.|+.+++...+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvliss-H~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLST-HILEEAEELCDRVIILNDGKIIAEGTPEELKEKFG 229 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeC-CcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhc
Confidence 99999999999999999999999999999999986558999975 45678999999999999999999999998876544
No 121
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.4e-37 Score=345.15 Aligned_cols=206 Identities=24% Similarity=0.310 Sum_probs=170.6
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCCCCC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~~~ 792 (1293)
++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.++
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45699999999999999999999999999999999998763 57999999987532 12356799999999999
Q ss_pred CCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 793 PQVTVKESLIYSAFLRL-----AKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+.+||+||+.+...... ......++..+++.++++.+|+.+..++.+. .|||||||||+||+||+.+|++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~l 166 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRAD-----QLSGGQQQRVAIARALAQQPDL 166 (243)
T ss_pred ccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999976421100 0001122334567889999999877776544 7999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|.+ |++++.|+.+
T Consensus 167 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 167 ILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 9999999999999999999999998764 899999999975 56678999999985 8999888753
No 122
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6e-37 Score=343.25 Aligned_cols=204 Identities=27% Similarity=0.395 Sum_probs=172.1
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-----------hcccceEEEEc
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-----------ETFARISGYCE 786 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----------~~~~~~~~~v~ 786 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~ 91 (250)
T PRK11264 14 HGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVF 91 (250)
T ss_pred CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccccccchhhHHHHhhhhEEEEe
Confidence 345699999999999999999999999999999999998653 47999999986532 12345799999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
|++.+++.+||+||+.+...... ....++..++++++++.+|+.+..++.++ +||||||||++||+||+.+|+
T Consensus 92 q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~Gq~qrv~la~al~~~p~ 164 (250)
T PRK11264 92 QNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYPR-----RLSGGQQQRVAIARALAMRPE 164 (250)
T ss_pred cCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCChh-----hCChHHHHHHHHHHHHhcCCC
Confidence 99999999999999987532111 12333444567889999999877766544 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 165 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 228 (250)
T PRK11264 165 VILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ-GRIVEQGPA 228 (250)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999877999999999975 56678999999985 899998874
No 123
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.9e-37 Score=336.49 Aligned_cols=194 Identities=28% Similarity=0.359 Sum_probs=165.6
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCCCCC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQNDIHS 792 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~ 792 (1293)
++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... .+++.++|++|++.++
T Consensus 14 ~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 14 GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35699999999999999999999999999999999998653 579999999876421 2356799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+||+||+.+....+. ...++..++++++++.+++.+..++.+. .||||||||++||+||+.+|++|+|||
T Consensus 92 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~lllLDE 163 (214)
T TIGR02673 92 PDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFPE-----QLSGGEQQRVAIARAIVNSPPLLLADE 163 (214)
T ss_pred cCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 99999999988654321 2233334567899999999877666654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G 213 (214)
T TIGR02673 164 PTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDD-G 213 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecC-C
Confidence 99999999999999999998777999999999975 56778999999975 5
No 124
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-38 Score=352.04 Aligned_cols=207 Identities=28% Similarity=0.404 Sum_probs=179.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-cceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-QKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++++|||||||||||++|+|+..|+ +|+|.++|++++...+ +|.+++|+|+..+||.|||.||+.|+.+.+....
T Consensus 33 f~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~ 109 (352)
T COG3842 33 FVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKLK 109 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCCC
Confidence 47899999999999999999999998 9999999999988655 5789999999999999999999999987432110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
+ .+.+++++++|+.++|++..++++ .+|||||||||+|||||
T Consensus 110 -------------------~--------------~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQqQRVALARAL 151 (352)
T COG3842 110 -------------------K--------------AEIKARVEEALELVGLEGFADRKP-----HQLSGGQQQRVALARAL 151 (352)
T ss_pred -------------------H--------------HHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHHHHHHHHHHh
Confidence 0 012345788999999998777655 56999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHHh
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFES 239 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~~ 239 (1293)
+.+|++|+||||.|+||..-+.++..-|+++.++.|.|.|++ +|+..|+..++|||++|++|+|...|+++++
T Consensus 152 ~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~V-THDqeEAl~msDrI~Vm~~G~I~Q~gtP~ei------ 224 (352)
T COG3842 152 VPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYV-THDQEEALAMSDRIAVMNDGRIEQVGTPEEI------ 224 (352)
T ss_pred hcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEE-ECCHHHHhhhccceEEccCCceeecCCHHHH------
Confidence 999999999999999999999999999999999899999996 5667899999999999999999999999998
Q ss_pred CCCCCCCCCChhhHHHHh
Q 000773 240 CGFCCPERKGTADFLQEV 257 (1293)
Q Consensus 240 ~G~~~~~~~~~~~~~~~~ 257 (1293)
|..|...-.|+|+.+.
T Consensus 225 --Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 225 --YERPATRFVADFIGES 240 (352)
T ss_pred --hhCcchHHHHHHhCcc
Confidence 4456666677777654
No 125
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-37 Score=317.41 Aligned_cols=201 Identities=25% Similarity=0.372 Sum_probs=169.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
|++|+|||||||||||++|.|+.+|+ +|+|.+||.++.... +++.+||++|++.+.+.+||.+|+..+..-
T Consensus 32 ~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~ 108 (258)
T COG3638 32 MVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLG 108 (258)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcc
Confidence 58999999999999999999999987 999999998765432 356799999999999999999999987543
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
+. + ......+.++..+ +..+-..|+.+|+.+.+.++.++ |||||+|||+
T Consensus 109 ~~--s---------~~~slfglfsk~d---------------k~~Al~aLervgi~~~A~qra~~-----LSGGQQQRVa 157 (258)
T COG3638 109 YT--S---------TWRSLFGLFSKED---------------KAQALDALERVGILDKAYQRAST-----LSGGQQQRVA 157 (258)
T ss_pred cc--h---------HHHHHhCCCCHHH---------------HHHHHHHHHHcCcHHHHHHHhcc-----CCcchhHHHH
Confidence 21 1 1122223333322 22344578999999988888876 9999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||||+++|++++.|||+++|||.+++.+++.|++++++.|.|+|+++|+ .+-+.++||||+-|++|+++|+||++++.
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~-vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQ-VDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEech-HHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 99999999999999999999999999999999999999999999999766 57888999999999999999999998875
Q ss_pred HH
Q 000773 235 EF 236 (1293)
Q Consensus 235 ~~ 236 (1293)
+.
T Consensus 237 ~~ 238 (258)
T COG3638 237 DE 238 (258)
T ss_pred HH
Confidence 43
No 126
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-37 Score=326.08 Aligned_cols=177 Identities=26% Similarity=0.373 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+||||||||||||+|+|+.+|+ +|+|.++|.+++ .+...++||+|++.++|-+||+||+.++.+..+...
T Consensus 31 fvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~- 104 (248)
T COG1116 31 FVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRGKSK- 104 (248)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHHhhheehhhccccch-
Confidence 47999999999999999999999998 999999999883 345678999999999999999999999987654110
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
.+.+..+++.|+.+||.+..|. ++++|||||||||+|||||+
T Consensus 105 ---------------------------------~e~~~~a~~~L~~VgL~~~~~~-----~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 105 ---------------------------------AEARERAKELLELVGLAGFEDK-----YPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred ---------------------------------HhHHHHHHHHHHHcCCcchhhc-----CccccChHHHHHHHHHHHHh
Confidence 0112246778999999887765 45679999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCC
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEG 222 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G 222 (1293)
.+|++|+||||+++||+.|+..+.+.|.++.++.++|++++ +|+.+|+..++|||++|.++
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllV-THdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLV-THDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEE-eCCHHHHHhhhCEEEEecCC
Confidence 99999999999999999999999999999988889999996 56778999999999999984
No 127
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-37 Score=348.31 Aligned_cols=218 Identities=22% Similarity=0.344 Sum_probs=178.2
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++..... ....+.+|+||||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 5677777654210 00124699999999999999999999999999999999998763 5899999998764
Q ss_pred h-----hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000773 775 Q-----ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE--SLKDAIVGLPGVTG 846 (1293)
Q Consensus 775 ~-----~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~--~~~~~~~~~~~~~~ 846 (1293)
. ...++.+||++|++. .+...||+||+.+..... ..++++..++++++++.+||. +..++.+. .
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~-----~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSPF-----E 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCcc-----c
Confidence 3 134567999999963 334579999998764332 234555556788999999996 55666544 7
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 847 LSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 847 lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|.+ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999865 899999999975 56678999999985 89
Q ss_pred EEEeCCC
Q 000773 926 VIYSGPL 932 (1293)
Q Consensus 926 ~~~~g~~ 932 (1293)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999985
No 128
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.1e-37 Score=338.46 Aligned_cols=202 Identities=28% Similarity=0.439 Sum_probs=168.7
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c-ccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T-FARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++.++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 87 (222)
T cd03224 10 YGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIF 87 (222)
T ss_pred cCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCCCCHHHHHhcCeEEeccccccC
Confidence 3445799999999999999999999999999999999998763 579999999875421 1 245699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLV-ELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
+.+|++||+.+...... ..+....+.++++.+ ++.+..++.+. .||||||||++|||||+.+|++|+||
T Consensus 88 ~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllD 157 (222)
T cd03224 88 PELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLAG-----TLSGGEQQMLAIARALMSRPKLLLLD 157 (222)
T ss_pred CCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 99999999987653321 112233456778877 46666666544 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 158 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 158 EPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999999877899999999975 56788999999975 899988874
No 129
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-37 Score=340.77 Aligned_cols=201 Identities=27% Similarity=0.394 Sum_probs=171.5
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 5699999999999999999999999999999999998663 47999999987532 233567899999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES--LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
|+||+.+....+ ....++..+.+.++++.+|+.+ ..++.+. +|||||||||+||+||+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYPH-----ELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcChh-----hCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 999998765432 1233344456789999999985 5566543 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999865 899999999975 56788999999985 899988875
No 130
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.2e-37 Score=345.18 Aligned_cols=214 Identities=19% Similarity=0.278 Sum_probs=178.3
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 8 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (269)
T PRK11831 8 VDMRGVSFTR-------------GNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENIP 72 (269)
T ss_pred EEEeCeEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5667766543 345699999999999999999999999999999999998763 5799999998754
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000773 775 QE------TFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLS 848 (1293)
Q Consensus 775 ~~------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 848 (1293)
.. ..++.++|++|++.+++.+||.||+.+...... ....++...++.++++.+|+.+..++.++ .||
T Consensus 73 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS 145 (269)
T PRK11831 73 AMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMPS-----ELS 145 (269)
T ss_pred ccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCC
Confidence 21 134569999999999999999999987543211 12233334557889999999887777654 799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEE
Q 000773 849 IEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI 927 (1293)
Q Consensus 849 gGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~ 927 (1293)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 146 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i~ 223 (269)
T PRK11831 146 GGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKIV 223 (269)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999975 57778999999975 8999
Q ss_pred EeCCC
Q 000773 928 YSGPL 932 (1293)
Q Consensus 928 ~~g~~ 932 (1293)
+.|+.
T Consensus 224 ~~g~~ 228 (269)
T PRK11831 224 AHGSA 228 (269)
T ss_pred EeCCH
Confidence 98875
No 131
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.7e-37 Score=335.31 Aligned_cols=194 Identities=26% Similarity=0.355 Sum_probs=165.8
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQNDIHSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~~~~ 793 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999865 357999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+|++||+.+....+. ...++..++++++++.+|+.+..++.++ +||||||||++||+||+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALPA-----ELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCChh-----hcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654321 2333444567899999999887776654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
|+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|.+ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999975 56667899999975 65
No 132
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.9e-37 Score=336.02 Aligned_cols=205 Identities=28% Similarity=0.449 Sum_probs=166.1
Q ss_pred cccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCC-
Q 000773 714 GVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHS- 792 (1293)
Q Consensus 714 ~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~- 792 (1293)
+++++++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.. ..++.++|++|++.+.
T Consensus 6 ~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~ 81 (213)
T cd03235 6 TVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDR 81 (213)
T ss_pred eeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEecccccccc
Confidence 3344456799999999999999999999999999999999998653 4799999998653 2456799999998764
Q ss_pred -CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 793 -PQVTVKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 793 -~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+.+||+||+.+....... .....++..++++++++.+++.+..++.++ .||||||||++||+||+.+|++|+|
T Consensus 82 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~llll 156 (213)
T cd03235 82 DFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIG-----ELSGGQQQRVLLARALVQDPDLLLL 156 (213)
T ss_pred CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 348999999875322110 001112233467899999999877776654 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ | +++.|
T Consensus 157 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 157 DEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999999999877899999999975 56678999999964 5 55544
No 133
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-37 Score=333.75 Aligned_cols=199 Identities=34% Similarity=0.508 Sum_probs=168.4
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~l 795 (1293)
+++.+|+|+||++++| +++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (211)
T cd03264 11 GKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNF 87 (211)
T ss_pred CCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCccccchHHHHhheEEecCCCcccccC
Confidence 3456999999999999 9999999999999999999998663 58999999987543 23456799999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
||+||+.+....+. ...++..+.++++++.+|+.+..++.++ .||||||||++||+||+.+|++++|||||+
T Consensus 88 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~ 159 (211)
T cd03264 88 TVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKIG-----SLSGGMRRRVGIAQALVGDPSILIVDEPTA 159 (211)
T ss_pred CHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987654331 2233334567889999999887776654 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 876 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|.+ |++++.|
T Consensus 160 ~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 160 GLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred cCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999999976 599999999975 46678999999985 8887654
No 134
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=309.88 Aligned_cols=191 Identities=27% Similarity=0.330 Sum_probs=169.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc--ccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV--PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+|||||||||+|++|++++.|+ +|+|++||.+..... .++.+|.++.+..++..||++|||.|.+++.+.
T Consensus 30 i~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l- 105 (245)
T COG4555 30 ITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNGL- 105 (245)
T ss_pred EEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhhh-
Confidence 58999999999999999999999998 999999998875433 467899999888899999999999998876432
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.+.+.+.+.+++.+.|+|.++.|+.+|+ +|-|+||||+||||
T Consensus 106 ---------------------------------~~~~~kari~~l~k~l~l~~~~~rRv~~-----~S~G~kqkV~iARA 147 (245)
T COG4555 106 ---------------------------------SRKEIKARIAELSKRLQLLEYLDRRVGE-----FSTGMKQKVAIARA 147 (245)
T ss_pred ---------------------------------hhhHHHHHHHHHHHHhChHHHHHHHHhh-----hchhhHHHHHHHHH
Confidence 1122345577889999999999999987 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|+++|++++|||||||||..+...+.+.++++.. .|+++|.+ +|.++|+..+||||++|++|++++.|+.+++..
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-egr~viFS-SH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-EGRAVIFS-SHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-CCcEEEEe-cccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 9999999999999999999999999999999854 69999998 667899999999999999999999999988754
No 135
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.7e-37 Score=335.01 Aligned_cols=197 Identities=25% Similarity=0.364 Sum_probs=167.0
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-----hcccceEEEEccCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-----ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~~~ 792 (1293)
+++.+|+++||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.++
T Consensus 11 ~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (213)
T cd03262 11 GDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLF 88 (213)
T ss_pred CCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccchhHHHHHhcceEEecccccC
Confidence 345699999999999999999999999999999999998653 47999999987631 23456799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+|++||+.+...... ....++..++++++++.+|+.+..++.+. +||||||||++||+||+.+|++|+|||
T Consensus 89 ~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDE 161 (213)
T cd03262 89 PHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYPA-----QLSGGQQQRVAIARALAMNPKVMLFDE 161 (213)
T ss_pred CCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCcc-----ccCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999987542111 12333444567889999999887777654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+
T Consensus 162 P~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 162 PTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred CccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999877899999999975 56778999999985 65
No 136
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.6e-37 Score=334.40 Aligned_cols=193 Identities=27% Similarity=0.406 Sum_probs=162.7
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDI-HSPQV 795 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 795 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 579999999999999999999999999999999999865 357999999987542 234567999999975 46789
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
|++||+.+..... .....+....++++++.+|+.+..++.++ .||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSPF-----TLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764322 12233334457889999999877776654 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 876 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLED-G 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-C
Confidence 99999999999999999877999999999975 56667999999975 5
No 137
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-37 Score=340.13 Aligned_cols=205 Identities=26% Similarity=0.376 Sum_probs=173.3
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.++
T Consensus 13 ~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T PRK10895 13 YKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIF 90 (241)
T ss_pred eCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHHhCeEEeccCCccc
Confidence 344579999999999999999999999999999999999865 347999999987542 11345799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+||+||+.+....+. ....++...+++++++.+|+.+..++.++ .||||||||++||+||+.+|++|+|||
T Consensus 91 ~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDE 163 (241)
T PRK10895 91 RRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMGQ-----SLSGGERRRVEIARALAANPKFILLDE 163 (241)
T ss_pred ccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999999987543221 12233444567899999999877666544 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||+|||+.++..+.+.+++++++|+|||+++|+++ ++...+|++++|.+ |++++.|+.
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 221 (241)
T PRK10895 164 PFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHGTP 221 (241)
T ss_pred CcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeCCH
Confidence 99999999999999999998877999999999975 57788999999975 899998875
No 138
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=344.15 Aligned_cols=214 Identities=25% Similarity=0.347 Sum_probs=178.1
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++..+ +++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 70 (274)
T PRK13647 5 IEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREVN 70 (274)
T ss_pred EEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 56777765442 134699999999999999999999999999999999998763 5799999998764
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 775 Q---ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
. ...++.+||++|++. .++..||.||+.|..... ....++..++++++++.+|+.+..++.+. .||||
T Consensus 71 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgG 142 (274)
T PRK13647 71 AENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPPY-----HLSYG 142 (274)
T ss_pred CCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCChh-----hCCHH
Confidence 3 223567999999963 455689999998764321 23344444567899999999888777655 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 220 (274)
T PRK13647 143 QKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEG 220 (274)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999975 46678999999975 8999998
Q ss_pred CC
Q 000773 931 PL 932 (1293)
Q Consensus 931 ~~ 932 (1293)
++
T Consensus 221 ~~ 222 (274)
T PRK13647 221 DK 222 (274)
T ss_pred CH
Confidence 85
No 139
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.5e-37 Score=295.72 Aligned_cols=198 Identities=27% Similarity=0.388 Sum_probs=171.8
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---h----cccceEEEEccCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---E----TFARISGYCEQNDI 790 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~----~~~~~~~~v~q~~~ 790 (1293)
+...||++|++.|++||-+||+|||||||||||-+++|...+ .+|+|.+.|++... + -+.+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 456799999999999999999999999999999999998764 58999999988642 1 13467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+.|+||..||+...+.++.... .+....+.+.++.+||.+..+.+.+ +|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~HyP~-----qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHYPA-----QLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccCcc-----ccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999998887765322 2333457789999999988777755 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
||||-+||..+..+|.+++-.+.++ |.|.+++||||. +...|||.+-|.. |+++.
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 9999999999999999999888754 999999999974 7889999999975 88764
No 140
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-37 Score=317.58 Aligned_cols=194 Identities=27% Similarity=0.416 Sum_probs=164.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||||+|.|+++|+ +|+|.++|.++.... .++++|+++|+-.+|..+||+||+.|..+-
T Consensus 36 i~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre 112 (263)
T COG1127 36 ILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLRE 112 (263)
T ss_pred EEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhheehHh
Confidence 47999999999999999999999998 999999999875432 346799999999999999999999986542
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
... +|+..+ ++.+...|+..||... +++.++.+||||++||++
T Consensus 113 ~~~-------------------lp~~~i--------------~~lv~~KL~~VGL~~~----~~~~~PsELSGGM~KRva 155 (263)
T COG1127 113 HTK-------------------LPESLI--------------RELVLMKLELVGLRGA----AADLYPSELSGGMRKRVA 155 (263)
T ss_pred hcc-------------------CCHHHH--------------HHHHHHHHHhcCCChh----hhhhCchhhcchHHHHHH
Confidence 211 122222 2345566889999754 233456679999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||||++.+|+++++||||+||||.++..+-++|+++.+.-|.|++++ +|+.++++..|||+++|.+|+|+..|+++++.
T Consensus 156 LARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~V-THDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 156 LARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMV-THDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEE-ECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999889999996 56678999999999999999999999999986
Q ss_pred H
Q 000773 235 E 235 (1293)
Q Consensus 235 ~ 235 (1293)
+
T Consensus 235 ~ 235 (263)
T COG1127 235 A 235 (263)
T ss_pred h
Confidence 4
No 141
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.2e-36 Score=334.15 Aligned_cols=197 Identities=27% Similarity=0.321 Sum_probs=167.0
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---h---cccceEEEEccCCCCC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---E---TFARISGYCEQNDIHS 792 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~---~~~~~~~~v~q~~~~~ 792 (1293)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. . .+++.++|++|++.++
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 14 GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 3569999999999999999999999999999999999876 358999999987532 1 1356799999999988
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+|++||+.+....+ ....++....++++++.+++.+..++.+. .||||||||++||+||+.+|++|+|||
T Consensus 92 ~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDE 163 (222)
T PRK10908 92 MDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFPI-----QLSGGEQQRVGIARAVVNKPAVLLADE 163 (222)
T ss_pred ccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCch-----hCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999998765332 12333434457889999999877776544 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI 927 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~ 927 (1293)
||+|||+.++..+.+.|++++++|.|||++||+++ ++...+|++++|.+ |+++
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 164 PTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999999777899999999975 56677899999985 7764
No 142
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-36 Score=336.10 Aligned_cols=199 Identities=24% Similarity=0.317 Sum_probs=163.7
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCC--CCC
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQND--IHS 792 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~--~~~ 792 (1293)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .++
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999865 357999999987643 23456799999998 467
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHH-HHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIF-VEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+.+||+||+.+....... ...++.... ++++++.+++. +..++.++ .||||||||++|||||+.+|++|+|
T Consensus 97 ~~~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LS~G~~qrv~laral~~~p~lllL 169 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGK--LSKKEARKEAVLLLLVGVGLPEEVLNRYPH-----ELSGGQRQRVAIARALALNPKLLIA 169 (228)
T ss_pred CcCCHHHHHHHHHHhccC--CcHHHHHHHHHHHHHHHCCCChhHhhCCch-----hcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 789999999876433221 111222122 35788999995 45566544 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|
T Consensus 170 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 170 DEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 9999999999999999999999876 899999999975 56668999999985 8887654
No 143
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-37 Score=339.85 Aligned_cols=205 Identities=22% Similarity=0.276 Sum_probs=173.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 13 l~i~~l~~~~-------------~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~~ 77 (257)
T PRK11247 13 LLLNAVSKRY-------------GERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPLA 77 (257)
T ss_pred EEEEEEEEEE-------------CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEHH
Confidence 6777877644 345699999999999999999999999999999999998663 4799999987653
Q ss_pred hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000773 775 QETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKR 854 (1293)
Q Consensus 775 ~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 854 (1293)
..++.++|++|++.+++.+||+||+.+... . . ...+++++++.+|+.+..++.+. .||||||||
T Consensus 78 --~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~--~--~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGqkqr 141 (257)
T PRK11247 78 --EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G--Q--WRDAALQALAAVGLADRANEWPA-----ALSGGQKQR 141 (257)
T ss_pred --HhhCceEEEecCccCCCCCcHHHHHHhccc-----c--h--HHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHH
Confidence 245679999999999999999999987421 0 1 12346789999999887776654 799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 855 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 855 v~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ .+.+.+|++++|.+ |++++.|+.
T Consensus 142 l~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 142 VALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 9999999999999999999999999999999999999865 4899999999975 56778999999985 899888764
No 144
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.6e-36 Score=336.29 Aligned_cols=202 Identities=30% Similarity=0.467 Sum_probs=170.3
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh--cccceEEEEccCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE--TFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~--~~~~~~~~v~q~~~~~~~l 795 (1293)
+++.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ...+.++|++|++.+++.+
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~ 89 (236)
T TIGR03864 12 GARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDL 89 (236)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcccCChhhhhhEEEeCCCCCCcccC
Confidence 345699999999999999999999999999999999998663 479999999875321 2234689999999988999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
|++||+.+....+ ....++....++++++.+|+.+..++.++ .||||||||++|||||+.+|++++|||||+
T Consensus 90 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEP~~ 161 (236)
T TIGR03864 90 SVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKVR-----ELNGGHRRRVEIARALLHRPALLLLDEPTV 161 (236)
T ss_pred cHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765432 12333344567889999999887777654 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 876 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||+.++..+.+.|+++++ +|+|||++||+++ ++ ..+|++++|.+ |++++.|+.
T Consensus 162 ~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 162 GLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCCH
Confidence 9999999999999999975 5899999999976 34 45999999975 899988874
No 145
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=353.86 Aligned_cols=207 Identities=22% Similarity=0.274 Sum_probs=176.8
Q ss_pred ccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c----ccceEEEEcc
Q 000773 715 VAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T----FARISGYCEQ 787 (1293)
Q Consensus 715 ~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~~v~q 787 (1293)
..++...+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... . .++.+||++|
T Consensus 36 ~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q 113 (400)
T PRK10070 36 EKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQ 113 (400)
T ss_pred hhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEEC
Confidence 345566789999999999999999999999999999999998763 479999999876421 1 2356999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 788 NDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 788 ~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
++.+++.+||+||+.+....+. ...++..++++++++.+||.+..++.+. +|||||||||+|||||+.+|++
T Consensus 114 ~~~l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~~-----~LSgGq~QRv~LArAL~~~P~i 185 (400)
T PRK10070 114 SFALMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYPD-----ELSGGMRQRVGLARALAINPDI 185 (400)
T ss_pred CCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCcc-----cCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999998754431 2334444568899999999888777654 7999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ |+++..|+++
T Consensus 186 LLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~~ 250 (400)
T PRK10070 186 LLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTPD 250 (400)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCHH
Confidence 999999999999999999999999875 4899999999975 56788999999985 8999988753
No 146
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=346.30 Aligned_cols=217 Identities=25% Similarity=0.329 Sum_probs=177.6
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++...... ...+++|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 56778776652110 0124699999999999999999999999999999999998763 4799999998763
Q ss_pred h-------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000773 775 Q-------ETFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGV 844 (1293)
Q Consensus 775 ~-------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 844 (1293)
. ...++.+|||+|++ .++ ..||+||+.|..... ..+.++..++++++++.+||. +..++.+.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~---- 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSPF---- 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCcc----
Confidence 1 23456799999986 344 579999998864322 234444445688999999996 55666544
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|.+
T Consensus 145 -~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~- 221 (290)
T PRK13634 145 -ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK- 221 (290)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 79999999999999999999999999999999999999999999999765 899999999975 57788999999975
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|++
T Consensus 222 G~i~~~g~~ 230 (290)
T PRK13634 222 GTVFLQGTP 230 (290)
T ss_pred CEEEEECCH
Confidence 899999985
No 147
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=347.08 Aligned_cols=219 Identities=23% Similarity=0.331 Sum_probs=178.3
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++..+... .....+|+|||+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 56778877653110 0123599999999999999999999999999999999998764 4799999876531
Q ss_pred ---------------------------hhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000773 775 ---------------------------QETFARISGYCEQND-IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVM 826 (1293)
Q Consensus 775 ---------------------------~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l 826 (1293)
....++.+|||+|++ ..+...||+||+.|..... ..+.++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3344579999998865432 234555556789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000773 827 DLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 905 (1293)
Q Consensus 827 ~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 905 (1293)
+.+||. +..++.+. .|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~~~-----~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSPF-----ELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 56776654 799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 906 PSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 906 ~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
++ .+.+.+|++++|.+ |++++.|+++
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~~ 250 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDTY 250 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 75 57788999999975 8999999863
No 148
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2e-36 Score=339.90 Aligned_cols=214 Identities=21% Similarity=0.276 Sum_probs=176.9
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (257)
T PRK10619 6 LNVIDLHKRY-------------GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTIN 70 (257)
T ss_pred EEEeeeEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcc
Confidence 5666766543 345699999999999999999999999999999999998763 4799999997653
Q ss_pred h----------------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-cc
Q 000773 775 Q----------------ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLK-DA 837 (1293)
Q Consensus 775 ~----------------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~ 837 (1293)
. ..+++.++|++|++.+++.+||+||+.+...... .....+...++.++++.+|+.+.. ++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~ 148 (257)
T PRK10619 71 LVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQGK 148 (257)
T ss_pred cccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 1 1235679999999999999999999987532111 123334445678999999997653 54
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHh
Q 000773 838 IVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 917 (1293)
Q Consensus 838 ~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v 917 (1293)
.+ .+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++
T Consensus 149 ~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i 222 (257)
T PRK10619 149 YP-----VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHV 222 (257)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 43 479999999999999999999999999999999999999999999999877999999999975 566679999
Q ss_pred heeecCcEEEEeCCC
Q 000773 918 LLLKRGGQVIYSGPL 932 (1293)
Q Consensus 918 ~~l~~~G~~~~~g~~ 932 (1293)
++|.+ |++++.|+.
T Consensus 223 ~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 223 IFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899998875
No 149
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=308.67 Aligned_cols=215 Identities=25% Similarity=0.413 Sum_probs=187.8
Q ss_pred cccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEc
Q 000773 710 MKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCE 786 (1293)
Q Consensus 710 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~ 786 (1293)
+++++++++++.+|+++|.++++|.+++|+|||||||||||.+++++.+ ..+|+|.++|.++.. ..+.+.+..+-
T Consensus 4 i~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILk 81 (252)
T COG4604 4 IENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILK 81 (252)
T ss_pred ehhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHH
Confidence 4566778899999999999999999999999999999999999999765 358999999998643 34567788899
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
|+..+...+||+|-+.|+.........+.++ ...+++.++.++|+++.|+... +||||||||.-||+.++++.+
T Consensus 82 Q~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD-~~~I~~aieyl~L~~l~dryLd-----~LSGGQrQRAfIAMVlaQdTd 155 (252)
T COG4604 82 QENHINSRLTVRDLVGFGRFPYSQGRLTKED-RRIINEAIEYLHLEDLSDRYLD-----ELSGGQRQRAFIAMVLAQDTD 155 (252)
T ss_pred hhchhhheeEHHHHhhcCCCcccCCCCchHH-HHHHHHHHHHhcccchHHHhHH-----hcccchhhhhhhheeeeccCc
Confidence 9999999999999999875543333344444 4568999999999999999876 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
.++||||.++||...+.++|+.||+++++ |+||+++.||.+. ...+.|+++.|++ |+++..|++++
T Consensus 156 yvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 156 YVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred EEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 99999999999999999999999999987 9999999999874 5567899999985 99999999864
No 150
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.4e-36 Score=346.47 Aligned_cols=230 Identities=20% Similarity=0.221 Sum_probs=182.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
-++.+|++................+...+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 467888876653211000000011235699999999999999999999999999999999998763 479999999876
Q ss_pred Chh------cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000773 774 KQE------TFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGV 844 (1293)
Q Consensus 774 ~~~------~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 844 (1293)
... .+++.++||+|++ .++|.+||.||+.+...... ...++++..++++++++.+|+. +..++.+.
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~---- 160 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRYPH---- 160 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCCcc----
Confidence 421 2356799999997 58899999999987643321 1234555566788999999994 45566544
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
+|||||||||+||+||+.+|++|++||||+|||+.++.+++++|+++.++ |.|+|++||+++ .+.+.+|++++|.+
T Consensus 161 -~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 161 -EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 79999999999999999999999999999999999999999999999765 899999999975 46678999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|++++.|+.+
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 8999999853
No 151
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.1e-36 Score=337.94 Aligned_cols=204 Identities=25% Similarity=0.312 Sum_probs=170.0
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCccCCh-----hcccceEEEEccCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGFPKKQ-----ETFARISGYCEQND 789 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~ 789 (1293)
+++.+++|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+... ...++.++|++|++
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 91 (247)
T TIGR00972 12 GEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKP 91 (247)
T ss_pred CCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCc
Confidence 3456999999999999999999999999999999999976532 127999999987642 23456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
.+++ +|++||+.+....+. ....++..+.++++++.+|+. +..++.+ ..||||||||++|||||+.+|
T Consensus 92 ~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~LSgG~~qrv~laral~~~p 163 (247)
T TIGR00972 92 NPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDSA-----LGLSGGQQQRLCIARALAVEP 163 (247)
T ss_pred ccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc-----ccCCHHHHHHHHHHHHHhcCC
Confidence 8888 999999988654321 122334445678899999997 5555544 479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 164 EVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999876 489999999975 56778999999985 899998875
No 152
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=342.05 Aligned_cols=218 Identities=26% Similarity=0.356 Sum_probs=178.1
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++..... ....+.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 4677777765310 00123599999999999999999999999999999999998763 5899999998763
Q ss_pred h-------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000773 775 Q-------ETFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGV 844 (1293)
Q Consensus 775 ~-------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 844 (1293)
. ...++.+|||+|++ .+++ .||.||+.|..... ..+.++...++.++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~----- 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKSP----- 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCCc-----
Confidence 1 23456799999986 4554 69999999865332 234455556788999999996 4556554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 479999999999999999999999999999999999999999999999877999999999975 56688999999985 8
Q ss_pred EEEEeCCCC
Q 000773 925 QVIYSGPLG 933 (1293)
Q Consensus 925 ~~~~~g~~~ 933 (1293)
++++.|+++
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 999999863
No 153
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.3e-36 Score=332.22 Aligned_cols=200 Identities=24% Similarity=0.397 Sum_probs=171.6
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|+
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~ 87 (223)
T TIGR03740 11 GKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTA 87 (223)
T ss_pred CCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCH
Confidence 34569999999999999999999999999999999999865 35899999998764322 2468999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
+||+.+....+. ... .++.++++.+|+.+..++.++ .||||||||++||+|++.+|++|+|||||+||
T Consensus 88 ~~~~~~~~~~~~---~~~----~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rv~laral~~~p~llllDEP~~~L 155 (223)
T TIGR03740 88 RENLKVHTTLLG---LPD----SRIDEVLNIVDLTNTGKKKAK-----QFSLGMKQRLGIAIALLNHPKLLILDEPTNGL 155 (223)
T ss_pred HHHHHHHHHHcC---CCH----HHHHHHHHHcCCcHHHhhhHh-----hCCHHHHHHHHHHHHHhcCCCEEEECCCccCC
Confidence 999987654321 121 246788999999887777654 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 878 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
|+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|++..
T Consensus 156 D~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 210 (223)
T TIGR03740 156 DPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKINK 210 (223)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChhh
Confidence 999999999999999877999999999975 56788999999975 89999998653
No 154
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=337.39 Aligned_cols=203 Identities=26% Similarity=0.363 Sum_probs=171.3
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC---------hhcccceEEEEccC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK---------QETFARISGYCEQN 788 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~---------~~~~~~~~~~v~q~ 788 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.. ....++.++|++|+
T Consensus 13 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 90 (242)
T PRK11124 13 GAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQ 90 (242)
T ss_pred CCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecccccccchhhHHHHHhheEEEecC
Confidence 345699999999999999999999999999999999998763 5799999998642 01234578999999
Q ss_pred CCCCCCCCHHHHHHHHH-HhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 789 DIHSPQVTVKESLIYSA-FLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+.+++.+||.||+.+.. ... ....++...++.++++.+|+.+..++.+. .||||||||++|||||+.+|++
T Consensus 91 ~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~laral~~~p~l 162 (242)
T PRK11124 91 YNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFPL-----HLSGGQQQRVAIARALMMEPQV 162 (242)
T ss_pred ccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999997532 221 12233334567899999999877777654 7999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 163 lilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 225 (242)
T PRK11124 163 LLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-GHIVEQGDA 225 (242)
T ss_pred EEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999877999999999975 56678999999985 899998875
No 155
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=344.16 Aligned_cols=202 Identities=24% Similarity=0.310 Sum_probs=170.5
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEccCCC-C
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCEQNDI-H 791 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~-~ 791 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 4699999999999999999999999999999999998763 58999999987532 123457999999973 2
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+..+||.||+.+..... ....++..++++++++.+||. +..++.++ .||||||||++||+||+.+|++|+|
T Consensus 98 ~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~LSgGq~qrl~laral~~~p~lLlL 169 (287)
T PRK13641 98 LFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSPF-----ELSGGQMRRVAIAGVMAYEPEILCL 169 (287)
T ss_pred hccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33589999998764332 223445556688999999996 56677655 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|.+ |++++.|+.+
T Consensus 170 DEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 230 (287)
T PRK13641 170 DEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GKLIKHASPK 230 (287)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999877999999999975 56788999999985 8999988853
No 156
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.5e-36 Score=331.80 Aligned_cols=195 Identities=26% Similarity=0.379 Sum_probs=164.0
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c---cc-ceEEEEccCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T---FA-RISGYCEQNDIHS 792 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~---~~-~~~~~v~q~~~~~ 792 (1293)
+.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 4699999999999999999999999999999999998663 589999999875321 1 12 5699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+||+||+.+....+. ....+..+++.++++.+|+.+..++.++ .||||||||++|||+|+.+|++|+|||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRPS-----ELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 99999999987643321 2223334567889999999877777654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEE
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI 927 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~ 927 (1293)
||+|||+.++..+.+.|++++++ |+|||++||+++ ..+.+|++++|.+ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~--~~~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE--LAKKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEEEeC-CEec
Confidence 99999999999999999999764 899999999975 3455899999985 7764
No 157
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=344.52 Aligned_cols=219 Identities=23% Similarity=0.366 Sum_probs=178.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+... ...+.+|+|||+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 478899887653110 0124599999999999999999999999999999999998763 479999999765
Q ss_pred Ch-------------------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000773 774 KQ-------------------ETFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE 832 (1293)
Q Consensus 774 ~~-------------------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~ 832 (1293)
.. ...++.+|||+|++ .+++ .||+||+.+..... ..+.++..++++++++.+|+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999987 4555 59999998864321 234444456788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 000773 833 -SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 911 (1293)
Q Consensus 833 -~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 911 (1293)
+..++.+ .+||||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.
T Consensus 167 ~~~~~~~~-----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERSP-----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 4566544 379999999999999999999999999999999999999999999999877999999999965 466
Q ss_pred HHHhHhheeecCcEEEEeCCCC
Q 000773 912 EAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 912 ~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+.+|++++|.+ |+++..|+++
T Consensus 241 ~~adri~vl~~-G~i~~~g~~~ 261 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTPY 261 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCHH
Confidence 88999999985 8999999863
No 158
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-36 Score=321.21 Aligned_cols=180 Identities=28% Similarity=0.410 Sum_probs=153.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-------ccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-------PQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+|||||||||||++|.|+..|+ +|.|.++|.++.... .++.+|||+|+..++|++||+||+.....
T Consensus 33 ~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~ 109 (226)
T COG1136 33 FVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLL 109 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHH
Confidence 48999999999999999999999997 999999998876433 23569999999999999999999998765
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccC-cccCCCcccccccccchh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKD-TIVGDEMNRGISGGQKKR 152 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-t~vg~~~~~~LSGGqrqR 152 (1293)
..+.... +.+...+.+++.+||++..+ +.+. .||||||||
T Consensus 110 ~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~p~-----eLSGGqqQR 150 (226)
T COG1136 110 IAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKKPS-----ELSGGQQQR 150 (226)
T ss_pred HcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCCch-----hcCHHHHHH
Confidence 5432110 01223566889999986555 5454 599999999
Q ss_pred hHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000773 153 VTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQI 224 (1293)
Q Consensus 153 v~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i 224 (1293)
|+|||||+.+|++++.||||.+||+.++..+++.++++.++.|+|+|+++|.| ++...|||++.|.+|++
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~~ 220 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGKI 220 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCee
Confidence 99999999999999999999999999999999999999988899999987764 68889999999999984
No 159
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=339.70 Aligned_cols=217 Identities=22% Similarity=0.275 Sum_probs=177.2
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (255)
T PRK11300 6 LSVSGLMMRF-------------GGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHIE 70 (255)
T ss_pred EEEeeEEEEE-------------CCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEECC
Confidence 5666766543 34579999999999999999999999999999999999866 35899999998764
Q ss_pred hh---c-ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC----------C--CCCHHHHHHHHHHHHHHcCCccccccc
Q 000773 775 QE---T-FARISGYCEQNDIHSPQVTVKESLIYSAFLRLA----------K--EVSKEDKIIFVEEVMDLVELESLKDAI 838 (1293)
Q Consensus 775 ~~---~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~----------~--~~~~~~~~~~~~~~l~~l~l~~~~~~~ 838 (1293)
.. . .+..++|++|++.+++.+||+||+.+....... . .....+....++++++.+|+.+..++.
T Consensus 71 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 150 (255)
T PRK11300 71 GLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQ 150 (255)
T ss_pred CCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCC
Confidence 31 1 234589999999999999999999875421100 0 001122334578889999998777776
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHh
Q 000773 839 VGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 917 (1293)
Q Consensus 839 ~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v 917 (1293)
++ .||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++
T Consensus 151 ~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~i 224 (255)
T PRK11300 151 AG-----NLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDRI 224 (255)
T ss_pred hh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 54 79999999999999999999999999999999999999999999999875 899999999975 567889999
Q ss_pred heeecCcEEEEeCCCC
Q 000773 918 LLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 918 ~~l~~~G~~~~~g~~~ 933 (1293)
++|.+ |++++.|+.+
T Consensus 225 ~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 225 YVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEC-CeEEecCCHH
Confidence 99985 8999988853
No 160
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.7e-37 Score=359.45 Aligned_cols=219 Identities=25% Similarity=0.424 Sum_probs=182.1
Q ss_pred ceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCc
Q 000773 692 PLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGF 771 (1293)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~ 771 (1293)
.-.++|+||++.++..+ +.+||+|+||+|+|||.+||+||||+||||+.++|-...+ |.+|+|.+||.
T Consensus 463 ~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 34789999999887654 4679999999999999999999999999999999999776 45899999999
Q ss_pred cCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH--H-HHcCCcccccccccCCCCC
Q 000773 772 PKKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEV--M-DLVELESLKDAIVGLPGVT 845 (1293)
Q Consensus 772 ~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~--l-~~l~l~~~~~~~~~~~~~~ 845 (1293)
|+++ ..+++.+|+|.|+|.+|.. ||+||+.|+.. +.+.++....++.. - =..++.+-.||.+|..+ .
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG-~ 603 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLD-----NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG-S 603 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHHhCccccccccCCcc-c
Confidence 9765 3467889999999999865 99999998643 33444332211111 1 02356677899999654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
+||||||||++|||||++||+||||||.||.||.++...|.+.|.++.+ ++|||++.|+. ...+.+|+|+++++ |+
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRL--STV~~Ad~Ivvi~~-G~ 679 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRL--STVRHADQIVVIDK-GR 679 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhh--hHhhhccEEEEEcC-Ce
Confidence 7999999999999999999999999999999999999999999988765 69999999986 47889999999985 99
Q ss_pred EEEeCCCC
Q 000773 926 VIYSGPLG 933 (1293)
Q Consensus 926 ~~~~g~~~ 933 (1293)
|++.|..+
T Consensus 680 V~E~G~h~ 687 (716)
T KOG0058|consen 680 VVEMGTHD 687 (716)
T ss_pred EEecccHH
Confidence 99999753
No 161
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-36 Score=336.46 Aligned_cols=206 Identities=25% Similarity=0.283 Sum_probs=170.1
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCccCCh---hcccceEEEEccCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGFPKKQ---ETFARISGYCEQNDIH 791 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~ 791 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.+||++|++.+
T Consensus 14 ~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~ 93 (250)
T PRK14247 14 GQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNP 93 (250)
T ss_pred CCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCcc
Confidence 3456999999999999999999999999999999999976531 358999999987642 2345679999999988
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
++.+||+||+.+....+.. ....++..+.++++++.+|+.+ ..++. +.+||||||||++|||||+.+|++
T Consensus 94 ~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~l 167 (250)
T PRK14247 94 IPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----AGKLSGGQQQRLCIARALAFQPEV 167 (250)
T ss_pred CCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999876432211 1123333456788999999854 23443 347999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++|||||+|||+.++..+.+.|+++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 168 llLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14247 168 LLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-GQIVEWGPT 229 (250)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-CeEEEECCH
Confidence 999999999999999999999999864 899999999975 56678999999975 899998875
No 162
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=343.42 Aligned_cols=217 Identities=20% Similarity=0.330 Sum_probs=177.1
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++..+... ...+.+|+|||++|++||++||+||||||||||+++|+|..++ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 56777776653100 0124699999999999999999999999999999999998763 4799999998763
Q ss_pred h-------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000773 775 Q-------ETFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGV 844 (1293)
Q Consensus 775 ~-------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 844 (1293)
. ...++.+||++|++ .+++ .||.||+.+..... ..+.++..++++++++.+||. +..++.+.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~---- 144 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQSPF---- 144 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCcc----
Confidence 2 13456799999986 3554 59999998864322 234445556788999999996 56666543
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+
T Consensus 145 -~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 145 -QMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred -cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 79999999999999999999999999999999999999999999999764 899999999975 56778999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|++
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 899999885
No 163
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-36 Score=339.36 Aligned_cols=215 Identities=24% Similarity=0.337 Sum_probs=179.2
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.... .+.+.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~----------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13650 5 IEVKNLTFKYKE----------DQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLLT 72 (279)
T ss_pred EEEEeEEEEcCC----------CCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 567777765421 0124599999999999999999999999999999999998763 5899999998764
Q ss_pred h---hcccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 775 Q---ETFARISGYCEQND-IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
. ...++.+||++|++ ..++..||+||+.+..... ..++++..++++++++.+||.+..++.++ .||||
T Consensus 73 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgG 144 (279)
T PRK13650 73 EENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREPA-----RLSGG 144 (279)
T ss_pred cCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCHH
Confidence 2 23456799999997 4677889999998864322 23455555678899999999887777654 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|.+ |+++..
T Consensus 145 q~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~~ 221 (279)
T PRK13650 145 QKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVEST 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999875 999999999975 34 67999999975 899998
Q ss_pred CCC
Q 000773 930 GPL 932 (1293)
Q Consensus 930 g~~ 932 (1293)
|++
T Consensus 222 g~~ 224 (279)
T PRK13650 222 STP 224 (279)
T ss_pred CCH
Confidence 885
No 164
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.2e-36 Score=349.29 Aligned_cols=207 Identities=20% Similarity=0.294 Sum_probs=177.6
Q ss_pred ccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCc----cCC---hhc----ccceEE
Q 000773 715 VAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGF----PKK---QET----FARISG 783 (1293)
Q Consensus 715 ~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~----~~~---~~~----~~~~~~ 783 (1293)
.+++...+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|. +.. ... .++.++
T Consensus 32 ~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~ 109 (382)
T TIGR03415 32 DETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVS 109 (382)
T ss_pred HhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEE
Confidence 345677899999999999999999999999999999999998763 5799999996 221 111 125799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000773 784 YCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVA 863 (1293)
Q Consensus 784 ~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~ 863 (1293)
|++|++.++|.+||+||+.+....+ ..+++++..+++++++.+||.+..++.++ +|||||||||+|||||+.
T Consensus 110 ~vfQ~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~~-----~LSgGq~QRV~LARALa~ 181 (382)
T TIGR03415 110 MVFQKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKPG-----ELSGGMQQRVGLARAFAM 181 (382)
T ss_pred EEECCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999875432 23445555678999999999988887765 699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 864 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 864 ~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|+||+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+++
T Consensus 182 ~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 182 DADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999999765 899999999975 56788999999985 8999999864
No 165
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=337.82 Aligned_cols=204 Identities=27% Similarity=0.408 Sum_probs=171.4
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 794 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 13 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (258)
T PRK13548 13 GGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFP 90 (258)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCC
Confidence 44569999999999999999999999999999999999865 357999999987532 2234578999999988889
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh------hCCCEE
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELV------ANPSII 868 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~------~~p~il 868 (1293)
+||+||+.+...... ...++....++++++.+|+.+..++.++ .|||||||||+||+||+ .+|++|
T Consensus 91 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGe~qrv~la~al~~~~~~~~~p~ll 162 (258)
T PRK13548 91 FTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDYP-----QLSGGEQQRVQLARVLAQLWEPDGPPRWL 162 (258)
T ss_pred CCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHHHHhcccccCCCCCEE
Confidence 999999987542211 1222333457889999999887777655 79999999999999999 599999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|||||+|||+.++..+.+.|++++ ++|+|||++||+++ ++...+|++++|.+ |++++.|+.+
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 226 (258)
T PRK13548 163 LLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-GRLVADGTPA 226 (258)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-CEEEeeCCHH
Confidence 9999999999999999999999987 56899999999975 56678999999985 8999888753
No 166
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=335.49 Aligned_cols=212 Identities=23% Similarity=0.342 Sum_probs=174.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+++||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 70 (237)
T PRK11614 6 LSFDKVSAHY-------------GKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDIT 70 (237)
T ss_pred EEEEeEEEee-------------CCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEecC
Confidence 5677776543 345699999999999999999999999999999999998663 5799999998754
Q ss_pred hh----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCH
Q 000773 775 QE----TFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLV-ELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 775 ~~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lSg 849 (1293)
.. ..++.++|++|++.+++.+||+||+.+..... ..++....++++++.+ ++.+..++.+ ..|||
T Consensus 71 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~ 140 (237)
T PRK11614 71 DWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRA-----GTMSG 140 (237)
T ss_pred CCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCch-----hhCCH
Confidence 31 23457999999999999999999998754211 1122233456777777 4665555543 37999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.
T Consensus 141 G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 218 (237)
T PRK11614 141 GEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVLE 218 (237)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999975 57888999999985 899999
Q ss_pred CCCC
Q 000773 930 GPLG 933 (1293)
Q Consensus 930 g~~~ 933 (1293)
|+.+
T Consensus 219 ~~~~ 222 (237)
T PRK11614 219 DTGD 222 (237)
T ss_pred CCHH
Confidence 9863
No 167
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-36 Score=328.90 Aligned_cols=194 Identities=25% Similarity=0.364 Sum_probs=163.4
Q ss_pred ceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHHHHH
Q 000773 725 EVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVTVKESLIY 803 (1293)
Q Consensus 725 ~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lTv~e~l~~ 803 (1293)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 3579999999876431 234679999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000773 804 SAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 883 (1293)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~ 883 (1293)
....+. .. .++..++++++++.+|+.+..++.+. +||||||||++||+||+.+|++++|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLPG-----ELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 532111 11 12233457899999999887777654 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 884 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 884 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
.+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999998764 899999999975 56678999999985 8887653
No 168
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4e-36 Score=336.68 Aligned_cols=204 Identities=24% Similarity=0.319 Sum_probs=172.2
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----------------hcccce
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----------------ETFARI 781 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----------------~~~~~~ 781 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (252)
T TIGR03005 11 GILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNK 88 (252)
T ss_pred CCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccccccchhHHHHHhhC
Confidence 345699999999999999999999999999999999998763 57999999986531 123567
Q ss_pred EEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000773 782 SGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVEL 861 (1293)
Q Consensus 782 ~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL 861 (1293)
++|++|++.+++..|+.||+.+..... .....++....++++++.+|+.+..++.+. .||||||||++||+||
T Consensus 89 i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~laral 161 (252)
T TIGR03005 89 IGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHMPA-----QLSGGQQQRVAIARAL 161 (252)
T ss_pred eEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcChh-----hcCHHHHHHHHHHHHH
Confidence 999999999999999999998753211 112333444567899999999877776543 7999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 862 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 862 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |++++.|+.
T Consensus 162 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 162 AMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999999998765 899999999975 56678999999985 899988875
No 169
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.9e-36 Score=335.49 Aligned_cols=210 Identities=22% Similarity=0.256 Sum_probs=169.1
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c-ccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T-FARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.... . .+..++|++|++.++
T Consensus 10 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 10 VEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred ECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 344579999999999999999999999999999999999741114579999999875421 1 223489999999999
Q ss_pred CCCCHHHHHHHHHHhcCC--C--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 793 PQVTVKESLIYSAFLRLA--K--EVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~--~--~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+.+|++|++.+....... . ....++..++++++++.+|+. +..++.+. .+||||||||++||++|+.+|++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~l 165 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKL 165 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCE
Confidence 999999999875432111 0 112233345678899999997 45555443 14999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-HhHhheeecCcEEEEeCCC
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~v~~l~~~G~~~~~g~~ 932 (1293)
|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|.+ |++++.|+.
T Consensus 166 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~i~~~g~~ 229 (243)
T TIGR01978 166 AILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GRIVKSGDV 229 (243)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CEEEEecCH
Confidence 9999999999999999999999999877899999999975 45555 799999974 899998875
No 170
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-36 Score=341.63 Aligned_cols=216 Identities=25% Similarity=0.371 Sum_probs=179.4
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
-++++|+++... +++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 367777776542 13569999999999999999999999999999999999876 3589999999876
Q ss_pred C-----hhcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000773 774 K-----QETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGL 847 (1293)
Q Consensus 774 ~-----~~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 847 (1293)
. ...+++.+||++|++. .+...||+||+.+..... ..+.++..++++++++.+||.+..++.++ .|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPTH-----CL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCcc-----cC
Confidence 3 1234567999999974 334679999998764322 22344444568899999999888777655 79
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEE
Q 000773 848 SIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQV 926 (1293)
Q Consensus 848 SgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~ 926 (1293)
|||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 899999999975 46678999999985 899
Q ss_pred EEeCCCC
Q 000773 927 IYSGPLG 933 (1293)
Q Consensus 927 ~~~g~~~ 933 (1293)
++.|+.+
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999864
No 171
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-36 Score=333.99 Aligned_cols=215 Identities=21% Similarity=0.252 Sum_probs=173.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g 770 (1293)
-+.++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFY-------------TDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEe-------------CCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 46777776643 3356999999999999999999999999999999999976532 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 841 (1293)
.++.. ...++.++|++|++.+++ +||+||+.+...... .....+..++++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999988875 899999988643321 112233345578888888873 334443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
.++||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|.
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 34799999999999999999999999999999999999999999999996 4799999999975 5677899999998
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 172
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.2e-36 Score=334.68 Aligned_cols=206 Identities=25% Similarity=0.347 Sum_probs=171.2
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~~ 793 (1293)
+++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++
T Consensus 13 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (242)
T TIGR03411 13 DGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFE 90 (242)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecCCCCHHHHHhcCeeEeccccccCC
Confidence 445699999999999999999999999999999999998653 479999999875421 12346999999999999
Q ss_pred CCCHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 794 QVTVKESLIYSAFLRLA--K---EVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~--~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
.+||+||+.+....... . ....++...+++++++.+|+.+..++.++ .|||||||||+|||||+.+|++|
T Consensus 91 ~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Ge~qrv~laral~~~p~~l 165 (242)
T TIGR03411 91 NLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAG-----LLSHGQKQWLEIGMLLMQDPKLL 165 (242)
T ss_pred CCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999875432100 0 01122334567899999999887776654 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+ |+++..|+.+
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~~ 227 (242)
T TIGR03411 166 LLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSLD 227 (242)
T ss_pred EecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCHH
Confidence 99999999999999999999999876 799999999975 56678999999985 8999888753
No 173
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=338.85 Aligned_cols=207 Identities=27% Similarity=0.384 Sum_probs=172.4
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSP 793 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~ 793 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++
T Consensus 12 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (255)
T PRK11231 12 YGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPE 89 (255)
T ss_pred ECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCC
Confidence 345679999999999999999999999999999999999865 357999999986532 233456999999998888
Q ss_pred CCCHHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 794 QVTVKESLIYSAFL--RLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
.+|+.||+.+.... ..... ..++...+++++++.+|+.+..++.++ .||||||||++||+||+.+|++|+||
T Consensus 90 ~~tv~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllD 163 (255)
T PRK11231 90 GITVRELVAYGRSPWLSLWGR-LSAEDNARVNQAMEQTRINHLADRRLT-----DLSGGQRQRAFLAMVLAQDTPVVLLD 163 (255)
T ss_pred CccHHHHHHhccchhhhhccC-CCHHHHHHHHHHHHHcCCHHHHcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999874211 11111 112233457889999999877777654 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|+.+
T Consensus 164 EP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 223 (255)
T PRK11231 164 EPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQGTPE 223 (255)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEcCHH
Confidence 999999999999999999998877999999999975 57788999999985 8999988764
No 174
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-36 Score=336.34 Aligned_cols=216 Identities=25% Similarity=0.278 Sum_probs=175.3
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~ 771 (1293)
++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~ 71 (253)
T PRK14267 5 IETVNLRVYY-------------GSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGR 71 (253)
T ss_pred EEEEeEEEEe-------------CCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCE
Confidence 5667776543 3456999999999999999999999999999999999986542 35799999998
Q ss_pred cCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKK-----QETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~-----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
++. ...+++.++|++|++.+++.+||.||+.+....+.. ....++....++++++.+|+.+ ..++.
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 146 (253)
T PRK14267 72 NIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY---- 146 (253)
T ss_pred EccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC----
Confidence 763 123456799999999999999999999876543211 1123333445788899998843 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++...+|++++|.+
T Consensus 147 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~ 223 (253)
T PRK14267 147 -PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL 223 (253)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999865 699999999975 56778999999985
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 224 -G~i~~~~~~ 232 (253)
T PRK14267 224 -GKLIEVGPT 232 (253)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 175
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-36 Score=336.43 Aligned_cols=214 Identities=24% Similarity=0.295 Sum_probs=174.2
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~~g 770 (1293)
.++++|+++.. +++.+|+|+||++++||++||+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWY-------------GEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEe-------------CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 46677776543 345699999999999999999999999999999999997653 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 841 (1293)
.++.. ..+++.++|++|++.+++ +|++||+.+..... ..+.++..++++++++.+|+. +..++.+
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 152 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSPA-- 152 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCCh--
Confidence 87532 124567999999998888 89999998864332 123333345578899999884 3334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||++||+++ ++.+.+|++++|.
T Consensus 153 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 153 ---LSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 47999999999999999999999999999999999999999999999864 799999999975 5667899999997
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |++++.|++
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 176
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-36 Score=338.24 Aligned_cols=202 Identities=22% Similarity=0.316 Sum_probs=171.5
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCCC-CCC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQNDI-HSP 793 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~~-~~~ 793 (1293)
++.+|+||||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .+.
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 14 GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 3469999999999999999999999999999999999866 357999999987642 234567999999975 366
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
..|+.||+.+..... ..+.++..++++++++.+|+.+..++.++ .||||||||++||+||+.+|++|+||||
T Consensus 92 ~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEP 163 (274)
T PRK13644 92 GRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSPK-----TLSGGQGQCVALAGILTMEPECLIFDEV 163 (274)
T ss_pred cchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 789999998764322 23344444568899999999888777654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+|||+.++..+.+.|++++++|+|||++||+++ ++ ..+|++++|.+ |++++.|+.+
T Consensus 164 t~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~~ 220 (274)
T PRK13644 164 TSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEPE 220 (274)
T ss_pred cccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999877999999999975 34 67999999985 8999999853
No 177
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.8e-36 Score=332.39 Aligned_cols=202 Identities=25% Similarity=0.335 Sum_probs=167.6
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 87 (230)
T TIGR03410 10 YGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIF 87 (230)
T ss_pred eCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCccc
Confidence 344579999999999999999999999999999999999876 3579999999875421 1245699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVE-LESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
+.+|++||+.+....+. ... .+.++++++.++ +.+..++.+. .||||||||++||++|+.+|++++||
T Consensus 88 ~~~tv~~~l~~~~~~~~---~~~---~~~~~~~l~~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~illlD 156 (230)
T TIGR03410 88 PRLTVEENLLTGLAALP---RRS---RKIPDEIYELFPVLKEMLGRRGG-----DLSGGQQQQLAIARALVTRPKLLLLD 156 (230)
T ss_pred CCCcHHHHHHHHHHhcC---cch---HHHHHHHHHHHHhHHHHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 99999999987643321 111 123466777776 5555566544 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|+.+
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 217 (230)
T TIGR03410 157 EPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAGD 217 (230)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999998875 899999999975 56668999999975 8999998864
No 178
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=338.84 Aligned_cols=204 Identities=24% Similarity=0.350 Sum_probs=170.4
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-----hcccceEEEEccCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-----ETFARISGYCEQNDIH 791 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~~ 791 (1293)
++++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.. ...++.++|++|++..
T Consensus 11 ~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 88 (271)
T PRK13638 11 YQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQ 88 (271)
T ss_pred cCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcccccCCHHHHHhheEEEeeChhh
Confidence 3445699999999999999999999999999999999998763 57999999987531 1234679999999753
Q ss_pred -CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 792 -SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 792 -~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+...|+.||+.+..... ....++..+.++++++.+|+.+..++.++ .||||||||++||++|+.+|++|+|
T Consensus 89 ~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~laraL~~~p~lllL 160 (271)
T PRK13638 89 QIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPIQ-----CLSHGQKKRVAIAGALVLQARYLLL 160 (271)
T ss_pred ccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCch-----hCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 34568999998754322 12333444567889999999887776654 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 161 DEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (271)
T PRK13638 161 DEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAP 220 (271)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999877999999999975 56678999999985 899998875
No 179
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=338.60 Aligned_cols=209 Identities=27% Similarity=0.370 Sum_probs=172.5
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-ceeEEEEEcCccCCh--------hcccceEEEEccC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIRISGFPKKQ--------ETFARISGYCEQN 788 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~-~~~G~i~~~g~~~~~--------~~~~~~~~~v~q~ 788 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+... ...++.++|++|+
T Consensus 15 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~ 94 (262)
T PRK09984 15 NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQ 94 (262)
T ss_pred CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccc
Confidence 4467999999999999999999999999999999999986542 236999999987532 1234568999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000773 789 DIHSPQVTVKESLIYSAFLRLA-----KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVA 863 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~ 863 (1293)
+.+++.+||+||+.+......+ .....++...+++++++.+|+.+..++.++ .|||||||||+|||||+.
T Consensus 95 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~ 169 (262)
T PRK09984 95 FNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVS-----TLSGGQQQRVAIARALMQ 169 (262)
T ss_pred cccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCcc-----ccCHHHHHHHHHHHHHhc
Confidence 9999999999999875321100 001112334567899999999887777655 799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 864 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 864 ~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+...+|++++|.+ |++++.|+.+
T Consensus 170 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 170 QAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIVALRQ-GHVFYDGSSQ 238 (262)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999999999764 899999999975 46788999999985 8999998864
No 180
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6.2e-36 Score=329.69 Aligned_cols=198 Identities=26% Similarity=0.357 Sum_probs=166.9
Q ss_pred ccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHH
Q 000773 723 LNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKESLI 802 (1293)
Q Consensus 723 L~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~ 802 (1293)
|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||+||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 35899999998764321 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000773 803 YSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 882 (1293)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~ 882 (1293)
+....... ....++..++++++++.+|+.+..++.++ +||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRPG-----QLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 22334444567899999999887777654 7999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 883 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 883 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999975 56788999999985 899887764
No 181
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=8.4e-36 Score=329.97 Aligned_cols=203 Identities=29% Similarity=0.433 Sum_probs=170.4
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEc-cCCCCC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCE-QNDIHS 792 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~-q~~~~~ 792 (1293)
+++++++|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++ |++.++
T Consensus 30 ~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 107 (236)
T cd03267 30 KYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLW 107 (236)
T ss_pred ccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccC
Confidence 44667899999999999999999999999999999999998663 57999999976432 23456789997 556788
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+|++|++.+....+ ....++..+.++++++.+|+.+..++.++ .||||||||++||++|+.+|++|+|||
T Consensus 108 ~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDE 179 (236)
T cd03267 108 WDLPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDE 179 (236)
T ss_pred CCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 8999999998765432 12333444557889999999888777655 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 180 Pt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 180 PTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 99999999999999999998765 899999999975 56778999999985 8887754
No 182
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-36 Score=335.14 Aligned_cols=216 Identities=21% Similarity=0.296 Sum_probs=175.3
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 5 l~i~~v~~~~-------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~ 71 (258)
T PRK14241 5 IDVKDLNIYY-------------GSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGE 71 (258)
T ss_pred EEEeeEEEEE-------------CCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCE
Confidence 5666666543 3456999999999999999999999999999999999976532 25899999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~ 842 (1293)
+... ...++.++|++|++.+++.+||+||+.+....+. ....++..++++++++.+|+. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 145 (258)
T PRK14241 72 DLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP---- 145 (258)
T ss_pred eccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC----
Confidence 7531 2345679999999999999999999987654321 112333445678889999884 233443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee-
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK- 921 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~- 921 (1293)
+.+|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 146 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~~ 222 (258)
T PRK14241 146 -GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFNL 222 (258)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEec
Confidence 347999999999999999999999999999999999999999999999864 689999999975 5678899999997
Q ss_pred ----cCcEEEEeCCC
Q 000773 922 ----RGGQVIYSGPL 932 (1293)
Q Consensus 922 ----~~G~~~~~g~~ 932 (1293)
++|++++.|+.
T Consensus 223 ~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 223 EATGKPGRLVEIDDT 237 (258)
T ss_pred ccCCCCceEEecCCH
Confidence 25899998875
No 183
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-36 Score=338.34 Aligned_cols=215 Identities=25% Similarity=0.346 Sum_probs=179.1
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|++..... +.+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 567777654321 124599999999999999999999999999999999998763 4899999998764
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 775 Q---ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
. ...++.+||++|++. .++..||.||+.+..... ..+.++..++++++++.+||.+..++.++ .||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREPH-----RLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCHH
Confidence 3 234567999999973 677789999998764332 22344445668899999999988877755 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|.+ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999876 899999999975 34 46999999985 899999
Q ss_pred CCCC
Q 000773 930 GPLG 933 (1293)
Q Consensus 930 g~~~ 933 (1293)
|+.+
T Consensus 222 g~~~ 225 (279)
T PRK13635 222 GTPE 225 (279)
T ss_pred CCHH
Confidence 9853
No 184
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=7e-36 Score=324.65 Aligned_cols=193 Identities=24% Similarity=0.354 Sum_probs=162.8
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC---h----hcccceEEEEccC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK---Q----ETFARISGYCEQN 788 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~---~----~~~~~~~~~v~q~ 788 (1293)
.++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|+
T Consensus 7 ~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~ 84 (206)
T TIGR03608 7 KFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQN 84 (206)
T ss_pred EECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecc
Confidence 3445679999999999999999999999999999999999876 35799999998742 1 1235679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
+.+++.+|++||+.+..... .....+..++++++++.+|+.+..++.+. +||||||||++||+||+.+|++|
T Consensus 85 ~~~~~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qr~~laral~~~p~ll 156 (206)
T TIGR03608 85 FALIENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKIY-----ELSGGEQQRVALARAILKDPPLI 156 (206)
T ss_pred hhhccCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCChh-----hCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999998865432 12233444567899999999887777654 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhee
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 920 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 920 (1293)
+|||||+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 157 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 157 LADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred EEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 999999999999999999999998877999999999974 45678887764
No 185
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-36 Score=337.79 Aligned_cols=202 Identities=25% Similarity=0.373 Sum_probs=171.3
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDI-HSPQV 795 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 795 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .+...
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 459999999999999999999999999999999999866 358999999987542 234567899999974 34468
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
||.||+.+..... ....++..++++++++.+|+.+..++.+. .||||||||++||+||+.+|++|+|||||+
T Consensus 95 tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrl~laraL~~~p~llilDEPt~ 166 (277)
T PRK13652 95 TVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVPH-----HLSGGEKKRVAIAGVIAMEPQVLVLDEPTA 166 (277)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764322 23344444567899999999887777654 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 876 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.+
T Consensus 167 gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~g~~~ 223 (277)
T PRK13652 167 GLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAYGTVE 223 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEECCHH
Confidence 99999999999999999875 899999999975 56788999999985 8999999863
No 186
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=338.14 Aligned_cols=217 Identities=27% Similarity=0.375 Sum_probs=177.4
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|++... +++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 12 l~i~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 76 (265)
T PRK10575 12 FALRNVSFRV-------------PGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPLE 76 (265)
T ss_pred EEEeeEEEEE-------------CCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEehh
Confidence 5677776543 34569999999999999999999999999999999999865 35799999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 775 Q---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
. ..+++.++|++|++.+++.+|+.||+.+....... .........++++++++.+++.+..++.++ .||||
T Consensus 77 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 151 (265)
T PRK10575 77 SWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVD-----SLSGG 151 (265)
T ss_pred hCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----cCCHH
Confidence 2 23456799999998888999999999874321100 001112223457889999999877777655 69999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..
T Consensus 152 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~~ 229 (265)
T PRK10575 152 ERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIAQ 229 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEe
Confidence 999999999999999999999999999999999999999999765 899999999975 56788999999985 899988
Q ss_pred CCCC
Q 000773 930 GPLG 933 (1293)
Q Consensus 930 g~~~ 933 (1293)
|+.+
T Consensus 230 ~~~~ 233 (265)
T PRK10575 230 GTPA 233 (265)
T ss_pred cCHH
Confidence 8754
No 187
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=321.70 Aligned_cols=201 Identities=23% Similarity=0.308 Sum_probs=181.8
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---h----cccceEEEEccCCCCCC
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---E----TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~----~~~~~~~~v~q~~~~~~ 793 (1293)
.-++|+|++++.||++.|||-||||||||+++|.++.+ +..|+|.++|.++.. . -+++.++.|+|+..++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 45899999999999999999999999999999999887 458999999987632 1 23467999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
+.||.||..|+..++ ..+++++++++.+.++.+||....++++. +|||||||||.|||||+.+|+||++|||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp~-----eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYPN-----ELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCcc-----cccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999987665 46788899999999999999999998865 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+|.|||--+.++++.|.++.++ ++||+++|||.+ |...+-|||.+|. +|+++..|+++
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 9999999999999999998765 899999999986 7888999999997 59999999975
No 188
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=6e-35 Score=322.61 Aligned_cols=170 Identities=25% Similarity=0.312 Sum_probs=134.6
Q ss_pred eeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHHH
Q 000773 726 VTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKESLIYSA 805 (1293)
Q Consensus 726 vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~ 805 (1293)
=.+++..||+++++||||-||||+.++|+|..++ .+|+ . ..-.++|-||.-.--.+.||++.|.-..
T Consensus 360 ~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~-------~~~~vSyKPQyI~~~~~gtV~~~l~~~~ 426 (591)
T COG1245 360 EEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----E-------EDLKVSYKPQYISPDYDGTVEDLLRSAI 426 (591)
T ss_pred cCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----C-------ccceEeecceeecCCCCCcHHHHHHHhh
Confidence 3577889999999999999999999999997764 3554 1 1224788899766667889999776433
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHH
Q 000773 806 FLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 885 (1293)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i 885 (1293)
..+...+ ....++.+-|.|.+..++.+. +|||||.|||+||.+|.+++++.+||||++.||.+.+..+
T Consensus 427 ~~~~~~s-------~~~~ei~~pl~l~~i~e~~v~-----~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~v 494 (591)
T COG1245 427 RSAFGSS-------YFKTEIVKPLNLEDLLERPVD-----ELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIV 494 (591)
T ss_pred hhhcccc-------hhHHhhcCccchHHHHhcccc-----cCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHH
Confidence 2211111 123578888999999988876 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheee
Q 000773 886 MRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 886 ~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
-+.||+..+. ++|.+++-||.-+ +--..||+++..
T Consensus 495 akvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 495 AKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999998865 8899999998653 333456666663
No 189
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-36 Score=338.97 Aligned_cols=200 Identities=27% Similarity=0.363 Sum_probs=166.9
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEccCC--C
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCEQND--I 790 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~--~ 790 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 4599999999999999999999999999999999998663 57999999987532 22456799999996 3
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
+++ .||+||+.+..... ....++..+.++++++.+|+. ...++.++ .||||||||++||+||+.+|++|+
T Consensus 98 ~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lll 168 (280)
T PRK13649 98 LFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNPF-----ELSGGQMRRVAIAGILAMEPKILV 168 (280)
T ss_pred hcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEE
Confidence 444 69999998764322 123344445678899999997 35565544 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (280)
T PRK13649 169 LDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-GKLVLSGKP 229 (280)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999877899999999975 56678999999985 899988875
No 190
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-36 Score=325.48 Aligned_cols=200 Identities=24% Similarity=0.374 Sum_probs=167.2
Q ss_pred cccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEc
Q 000773 714 GVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCE 786 (1293)
Q Consensus 714 ~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~ 786 (1293)
+++++++.+ |+|+++++ |+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++
T Consensus 7 ~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~ 81 (214)
T cd03297 7 EKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVF 81 (214)
T ss_pred eEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEe
Confidence 345566655 99999999 99999999999999999999998763 47999999987531 12345799999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
|++.+++.+|++||+.+..... ..+...++++++++.+|+.+..++.++ .||||||||++||+||+.+|+
T Consensus 82 q~~~~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~ 151 (214)
T cd03297 82 QQYALFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYPA-----QLSGGEKQRVALARALAAQPE 151 (214)
T ss_pred cCCccCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCcc-----cCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999998764321 222333457889999999877666544 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
+++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 152 LLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999875 899999999975 46678999999985 8887764
No 191
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6.8e-36 Score=348.92 Aligned_cols=201 Identities=25% Similarity=0.404 Sum_probs=171.2
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEccC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCEQN 788 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~ 788 (1293)
+++++. + |+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|+
T Consensus 8 ~~~~~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~ 83 (354)
T TIGR02142 8 RLGDFS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQE 83 (354)
T ss_pred EECCEE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecC
Confidence 344444 4 89999999999999999999999999999998763 57999999987532 1235679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
+.+++.+||+||+.+..... ...+..++++++++.+||.+..++.+. +|||||||||+|||||+.+|++|
T Consensus 84 ~~l~~~~tv~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGqkqRvalAraL~~~p~ll 153 (354)
T TIGR02142 84 ARLFPHLSVRGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLPG-----RLSGGEKQRVAIGRALLSSPRLL 153 (354)
T ss_pred CccCCCCcHHHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999998864321 123334567899999999988887755 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|++
T Consensus 154 lLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 154 LMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred EEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999875 899999999975 57778999999985 899999875
No 192
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.4e-35 Score=327.48 Aligned_cols=212 Identities=25% Similarity=0.348 Sum_probs=172.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++..... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 7 l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~ 75 (228)
T PRK10584 7 VEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPLH 75 (228)
T ss_pred EEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEcc
Confidence 6777777654210 0013599999999999999999999999999999999998663 5799999998754
Q ss_pred hhc-------ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000773 775 QET-------FARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGL 847 (1293)
Q Consensus 775 ~~~-------~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 847 (1293)
... .++.++|++|++.+++.+|+.||+.+....+. ....+..++++++++.+++.+..++.+. .|
T Consensus 76 ~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 147 (228)
T PRK10584 76 QMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLPA-----QL 147 (228)
T ss_pred cCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCChh-----hC
Confidence 211 12569999999999999999999987643321 2233344568899999999887776654 69
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEE
Q 000773 848 SIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQV 926 (1293)
Q Consensus 848 SgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~ 926 (1293)
|||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|.+ |++
T Consensus 148 S~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~i 224 (228)
T PRK10584 148 SGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQL 224 (228)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999975 34 66999999975 887
Q ss_pred EE
Q 000773 927 IY 928 (1293)
Q Consensus 927 ~~ 928 (1293)
++
T Consensus 225 ~~ 226 (228)
T PRK10584 225 QE 226 (228)
T ss_pred Ee
Confidence 64
No 193
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=341.85 Aligned_cols=221 Identities=18% Similarity=0.254 Sum_probs=177.4
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC-C-ceeEEEEEcCcc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG-G-YIEGDIRISGFP 772 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~-~-~~~G~i~~~g~~ 772 (1293)
++++|++...... .+...+|+||||++++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 5677776654211 1124699999999999999999999999999999999997642 2 357999999987
Q ss_pred CCh---hc----ccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---cccccc
Q 000773 773 KKQ---ET----FARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL---KDAIVG 840 (1293)
Q Consensus 773 ~~~---~~----~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---~~~~~~ 840 (1293)
+.. .. +++.++|++|++ .+.|.+|+.+++........ ....++..+++.++++.+||.+. .++.
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 642 11 124699999998 57899999998865543221 23445555678899999999752 3443
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhhe
Q 000773 841 LPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLL 919 (1293)
Q Consensus 841 ~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~ 919 (1293)
+.+|||||||||+||+||+.+|++|++||||+|||+.++.+++++|+++++ .|.|+|++||+++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 347999999999999999999999999999999999999999999999986 4899999999975 46678999999
Q ss_pred eecCcEEEEeCCCC
Q 000773 920 LKRGGQVIYSGPLG 933 (1293)
Q Consensus 920 l~~~G~~~~~g~~~ 933 (1293)
|.+ |++++.|+.+
T Consensus 227 m~~-G~ive~g~~~ 239 (326)
T PRK11022 227 MYA-GQVVETGKAH 239 (326)
T ss_pred EEC-CEEEEECCHH
Confidence 985 9999999853
No 194
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-36 Score=337.32 Aligned_cols=218 Identities=22% Similarity=0.305 Sum_probs=178.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.+.++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGY-------------GKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEE-------------CCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 46677776543 345699999999999999999999999999999999998663 479999999875
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
.. ...++.++|++|++.+++.+|++||+.+......+ .....+....+++++++.+|+.+..++.+. .|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVD-----TLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----cCCh
Confidence 32 22345699999999999999999999764211100 000112233457889999999877777654 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999864 899999999975 57888999999985 89999
Q ss_pred eCCCC
Q 000773 929 SGPLG 933 (1293)
Q Consensus 929 ~g~~~ 933 (1293)
.|+.+
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 98864
No 195
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.7e-36 Score=335.47 Aligned_cols=207 Identities=27% Similarity=0.396 Sum_probs=171.8
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 794 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 12 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (256)
T TIGR03873 12 GGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVP 89 (256)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcccCCHHHHhhheEEecccCccCCC
Confidence 445799999999999999999999999999999999998663 47999999987542 2234568999999888888
Q ss_pred CCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 795 VTVKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
+||+||+.+....... ......+..+++.++++.+++.+..++.++ .||||||||++||+||+.+|++++||||
T Consensus 90 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEP 164 (256)
T TIGR03873 90 LTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMS-----TLSGGERQRVHVARALAQEPKLLLLDEP 164 (256)
T ss_pred CCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 9999999874211000 001112223457889999999887777654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+|||+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|.+ |+++..|+.+
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 165 TNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 9999999999999999999877899999999986 57788999999985 8999988754
No 196
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-36 Score=293.72 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=180.9
Q ss_pred cccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC-------------h-
Q 000773 710 MKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK-------------Q- 775 (1293)
Q Consensus 710 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~-------------~- 775 (1293)
++++.+++|...+|++||++.+.|+++.|+|.|||||||+|+||.-+.+ +..|.|.+||..+. .
T Consensus 9 v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~ 86 (256)
T COG4598 9 VEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKR 86 (256)
T ss_pred hhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHH
Confidence 4567788899999999999999999999999999999999999998665 35799999997531 1
Q ss_pred --hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000773 776 --ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRK 853 (1293)
Q Consensus 776 --~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 853 (1293)
...+...|+|+|+..+++.+||.||+.-+.. +. -..++.+..++++..++.+|+.+.+|.+.. .|||||+|
T Consensus 87 q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPv-hV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~-----~LSGGQQQ 159 (256)
T COG4598 87 QLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPV-HV-LGVSKAEAIERAEKYLAKVGIAEKADAYPA-----HLSGGQQQ 159 (256)
T ss_pred HHHHHHHHhhHhhhhcchhHHHHHHHHHHhcch-Hh-hcCCHHHHHHHHHHHHHHhCchhhhhcCcc-----ccCchHHH
Confidence 1123457999999999999999999964321 11 134677777889999999999999887755 69999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 854 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 854 rv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|++|||||+.+|+++++|||||.|||+-.-++++.++.++++|+|++++||.... .-+...+++.|.+ |.|.+.||++
T Consensus 160 R~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 160 RVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred HHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 9999999999999999999999999999999999999999999999999997542 3445678888875 9999999974
No 197
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=341.95 Aligned_cols=226 Identities=22% Similarity=0.238 Sum_probs=181.6
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
-++.+|+++....... .....+.+.+|+||||+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~---~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRG---LFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCC---ccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 3678888766532110 00001235699999999999999999999999999999999998763 479999999876
Q ss_pred Ch------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000773 774 KQ------ETFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGV 844 (1293)
Q Consensus 774 ~~------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 844 (1293)
.. ..+++.++||+|++ .+.|.+|+.+++........ ...+++..+++.++++.+||.+ ..++.+
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~p----- 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRYP----- 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCCC-----
Confidence 32 12456799999998 58899999999876543321 2344555567899999999963 556654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
.+|||||||||+|||||+.+|++|++||||++||..++.+++++|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999765 999999999965 45568999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|++++.|+.+
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 8999999853
No 198
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-35 Score=334.74 Aligned_cols=204 Identities=23% Similarity=0.339 Sum_probs=169.7
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCC--C
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQND--I 790 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~--~ 790 (1293)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++ .
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 3569999999999999999999999999999999999876 3579999999875421 1345799999996 4
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
+++.+||+||+.+..... .....++...+++++++.+|+. +..++.++ +||||||||++|||||+.+|++|+
T Consensus 101 ~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-----~LSgGe~qrv~laral~~~p~ill 173 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKLPR-----QLSGGQLQRINIARALAVKPKLIV 173 (265)
T ss_pred cCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEE
Confidence 677899999997654211 1122333345678999999995 56666544 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|.+ |++++.|+.+
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 236 (265)
T TIGR02769 174 LDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-GQIVEECDVA 236 (265)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-CEEEEECCHH
Confidence 99999999999999999999998865 899999999975 56678999999985 8999998863
No 199
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-36 Score=367.90 Aligned_cols=212 Identities=22% Similarity=0.324 Sum_probs=177.4
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+||||++++||+++|+||||||||||+|+|+|..++++.+|+|.++|.+.... ..++.+||++|++.++
T Consensus 15 ~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (506)
T PRK13549 15 FGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELALV 94 (506)
T ss_pred eCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccC
Confidence 345579999999999999999999999999999999999866433589999999876431 1245699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+||+||+.+....+.......++..++++++++.+|+.+..++.++ +|||||||||+||+||+.+|++|||||
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGqkqrv~la~al~~~p~lllLDE 169 (506)
T PRK13549 95 KELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVG-----NLGLGQQQLVEIAKALNKQARLLILDE 169 (506)
T ss_pred CCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999999876432211112233334568899999999887777765 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCC
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRN 935 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~ 935 (1293)
||+|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|.+ |++++.|+.++.
T Consensus 170 Pt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 230 (506)
T PRK13549 170 PTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTRPAAGM 230 (506)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeecccccC
Confidence 99999999999999999999877999999999975 56678999999985 899999987643
No 200
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=331.43 Aligned_cols=216 Identities=21% Similarity=0.258 Sum_probs=174.9
Q ss_pred eeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--C-CceeEEEEEc
Q 000773 693 LAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIRIS 769 (1293)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~-~~~~G~i~~~ 769 (1293)
..+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++
T Consensus 12 ~~l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~ 78 (260)
T PRK10744 12 SKIQVRNLNFYY-------------GKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLD 78 (260)
T ss_pred ceEEEEEEEEEe-------------CCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEEC
Confidence 356778877654 23469999999999999999999999999999999999754 1 1357999999
Q ss_pred CccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----cccccccc
Q 000773 770 GFPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVG 840 (1293)
Q Consensus 770 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~ 840 (1293)
|.+... ...++.++|++|++.+++ .|++||+.+...... ..+.++..++++++++.+++. +..++.
T Consensus 79 g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 153 (260)
T PRK10744 79 GENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS-- 153 (260)
T ss_pred CEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC--
Confidence 987631 234567999999998887 899999987643221 123344445678899999974 233443
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhee
Q 000773 841 LPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 920 (1293)
Q Consensus 841 ~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 920 (1293)
..+||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++ +++|||++||+++ ++.+.+|++++|
T Consensus 154 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 154 ---GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred ---CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 34799999999999999999999999999999999999999999999986 4789999999975 566789999999
Q ss_pred ecCcEEEEeCCC
Q 000773 921 KRGGQVIYSGPL 932 (1293)
Q Consensus 921 ~~~G~~~~~g~~ 932 (1293)
.+ |+++..|+.
T Consensus 229 ~~-G~i~~~g~~ 239 (260)
T PRK10744 229 YL-GELIEFGNT 239 (260)
T ss_pred EC-CEEEEeCCH
Confidence 85 899998875
No 201
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=330.92 Aligned_cols=206 Identities=22% Similarity=0.284 Sum_probs=168.0
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC-CceeEEEEEcCccCCh---hcccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG-GYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~-~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+... ...++.++|++|++.++
T Consensus 12 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~ 91 (246)
T PRK14269 12 YGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVF 91 (246)
T ss_pred ECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCccc
Confidence 3445799999999999999999999999999999999997532 2457999999987643 23456799999999888
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
+ .|++||+.+....+... ...++...+++++++.+++.+ ..++. .+.||||||||++|||||+.+|+++
T Consensus 92 ~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~ll 164 (246)
T PRK14269 92 V-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALALSGGQQQRLCIARALAIKPKLL 164 (246)
T ss_pred c-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 7 69999998764332110 012233345778999999953 23333 3479999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 165 lLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 225 (246)
T PRK14269 165 LLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFGES 225 (246)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEECCH
Confidence 99999999999999999999999864 899999999975 57778999999985 899998875
No 202
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=329.84 Aligned_cols=215 Identities=24% Similarity=0.313 Sum_probs=173.3
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--C-CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~-~~~~G~i~~~g 770 (1293)
.++++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFY-------------GDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEE-------------CCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 46778877654 33469999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL----KDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~ 841 (1293)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....++..++++++++.+|+.+. .++.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLHES--- 146 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87532 123567999999998888 599999988653321 11223334557888999998542 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||++||+++ ++.+.+|++++|.
T Consensus 147 --~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14242 147 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFY 222 (253)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999854 799999999975 5667899999998
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14242 223 M-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 899988875
No 203
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=327.23 Aligned_cols=203 Identities=27% Similarity=0.383 Sum_probs=172.8
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lT 796 (1293)
+++.+++|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.... ..++.++|++|++.+++.+|
T Consensus 11 ~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (232)
T cd03300 11 GGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLT 88 (232)
T ss_pred CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcceEEEecccccCCCCc
Confidence 345699999999999999999999999999999999998763 479999999876431 23467999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
++||+.+....+. ...+.....++++++.+|+.+..++.+. .||+|||||++|||||+.+|++++|||||+|
T Consensus 89 ~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrl~laral~~~p~llllDEP~~g 160 (232)
T cd03300 89 VFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKPS-----QLSGGQQQRVAIARALVNEPKVLLLDEPLGA 160 (232)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987654331 2233334467889999999887777654 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 877 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 161 LD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 161 LDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 9999999999999999865 899999999975 56778999999985 899988864
No 204
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-35 Score=318.22 Aligned_cols=196 Identities=31% Similarity=0.580 Sum_probs=161.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-ceeEEEEEcCcc
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIRISGFP 772 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~-~~~G~i~~~g~~ 772 (1293)
.++|+|+++..+.+ .+++.+|+++||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999887532 13567999999999999999999999999999999999986532 468999999987
Q ss_pred CCh--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 773 KKQ--ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 773 ~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
... ...++.++|++|++.+++.+||+||+.+..... .++. ...||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999997653210 2222 2379999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++ +.|+|+++|+...++.+.+|++++|.+ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 677777666543367788999999985 888875
Q ss_pred C
Q 000773 930 G 930 (1293)
Q Consensus 930 g 930 (1293)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 205
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-36 Score=302.02 Aligned_cols=206 Identities=24% Similarity=0.395 Sum_probs=160.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeEEEEECCcccCCc-----cccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLN--RDLKVRGEITYNGYRLNEF-----VPQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+||++|||||||||||+++..... |..+++|+|.++|+++.+. ..++++|+|+|.|..|| +|++||+.|+.+
T Consensus 35 VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r 113 (253)
T COG1117 35 VTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLR 113 (253)
T ss_pred eEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHH
Confidence 589999999999999999988754 4457899999999987553 24688999999999998 899999999998
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccchh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQKKR 152 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqR 152 (1293)
+.+..+ .. + +++++.-|+.-.|= +.+|+.- +...+|||||+||
T Consensus 114 ~~g~~~--~~------------------l--------------deiVe~sLk~AaLWdEVKDrL~--~sa~~LSGGQQQR 157 (253)
T COG1117 114 LHGIKD--KE------------------L--------------DEIVESSLKKAALWDEVKDRLH--KSALGLSGGQQQR 157 (253)
T ss_pred hhccch--HH------------------H--------------HHHHHHHHHHhHhHHHhHHHhh--CCccCCChhHHHH
Confidence 765422 00 0 11122222222221 1222221 2235699999999
Q ss_pred hHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhh
Q 000773 153 VTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRER 232 (1293)
Q Consensus 153 v~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~ 232 (1293)
++|||||+.+|+||+||||||+|||.+...|-++|.++.+ .-|||++ +|.+.++.+..|+...+..|++++.|+.++
T Consensus 158 LcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIviV-THnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 158 LCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVIV-THNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEEE-eCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 9999999999999999999999999999999999999974 5688886 566789999999999999999999999988
Q ss_pred HHHHHHhCCCCCCCCCChhhHH
Q 000773 233 VLEFFESCGFCCPERKGTADFL 254 (1293)
Q Consensus 233 ~~~~f~~~G~~~~~~~~~~~~~ 254 (1293)
+. ..|.++.+.||+
T Consensus 235 iF--------~~P~~~~TedYi 248 (253)
T COG1117 235 IF--------TNPKHKRTEDYI 248 (253)
T ss_pred hh--------cCccHHHHHHHh
Confidence 73 346655555544
No 206
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.2e-35 Score=338.68 Aligned_cols=225 Identities=20% Similarity=0.295 Sum_probs=180.3
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-ceeEEEEEcCcc
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIRISGFP 772 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~-~~~G~i~~~g~~ 772 (1293)
-++++|++...... .+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 36788887655321 12356999999999999999999999999999999999976532 237999999987
Q ss_pred CCh---hc---c-cceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000773 773 KKQ---ET---F-ARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPG 843 (1293)
Q Consensus 773 ~~~---~~---~-~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 843 (1293)
+.. .. + ++.++||+|++ .+.|.+|+.+++........ ..+.++..+++.++++.+||.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 642 11 1 24799999998 68899999999876543321 234555556788999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+.+|||||||||+||+||+.+|++|++||||+|||+.++..++++|+++.++ |.|+|++|||++ .+.+.+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4589999999999999999999999999999999999999999999999765 899999999975 45678999999975
Q ss_pred CcEEEEeCCCC
Q 000773 923 GGQVIYSGPLG 933 (1293)
Q Consensus 923 ~G~~~~~g~~~ 933 (1293)
|++++.|+.+
T Consensus 238 -G~ive~g~~~ 247 (330)
T PRK09473 238 -GRTMEYGNAR 247 (330)
T ss_pred -CEEEEECCHH
Confidence 9999999864
No 207
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=335.46 Aligned_cols=202 Identities=29% Similarity=0.366 Sum_probs=170.4
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-----hcccceEEEEccCCC-CCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-----ETFARISGYCEQNDI-HSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~-~~~ 793 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 4699999999999999999999999999999999998663 47999999987631 123567999999963 334
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
..||.||+.+..... ....++...++.++++.+|+.+..++.++ .||||||||++||+||+.+|++++||||
T Consensus 93 ~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LS~Gq~qrv~laral~~~p~llllDEP 164 (275)
T PRK13639 93 APTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPPH-----HLSGGQKKRVAIAGILAMKPEIIVLDEP 164 (275)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 579999998754321 12344444567899999999888887755 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+.+
T Consensus 165 t~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (275)
T PRK13639 165 TSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIKEGTPK 222 (275)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999877999999999975 56678999999985 8999998853
No 208
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.7e-35 Score=322.71 Aligned_cols=198 Identities=24% Similarity=0.313 Sum_probs=166.8
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHH
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-ETFARISGYCEQNDIHSPQVTVKES 800 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lTv~e~ 800 (1293)
+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 46799999999999999999999999999999998763 47999999987643 2345679999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000773 801 LIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 880 (1293)
Q Consensus 801 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~ 880 (1293)
+.+...... . ...+...+++++++.+|+.+..++.+. .||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLPE-----QLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532211 1 111223457889999999887777654 79999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCC
Q 000773 881 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGP 931 (1293)
Q Consensus 881 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~ 931 (1293)
++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998765 899999999975 46678999999974 89988764
No 209
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=331.12 Aligned_cols=204 Identities=23% Similarity=0.276 Sum_probs=166.2
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCC---CCCceeEEEEEcCccCCh-----hcccceEEEEccCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRK---TGGYIEGDIRISGFPKKQ-----ETFARISGYCEQND 789 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~---~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~ 789 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|.+... ...++.++|++|++
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 93 (250)
T PRK14245 14 GDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRP 93 (250)
T ss_pred CCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCC
Confidence 3456999999999999999999999999999999999952 221247999999987642 23456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL----KDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
.+++ .|++||+.+....+. ....+...+.++++++.+|+.+. .++. +..||||||||++|||||+.+|
T Consensus 94 ~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p 165 (250)
T PRK14245 94 NPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLKES-----AFALSGGQQQRLCIARAMAVSP 165 (250)
T ss_pred ccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhhCC-----cccCCHHHHHHHHHHHHHhcCC
Confidence 8887 699999987643321 11222233457889999998642 3333 3479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 166 ~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~~~~~~~~ 229 (250)
T PRK14245 166 SVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GEMVEYDDT 229 (250)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999985 4799999999975 56788999999975 899999975
No 210
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=333.27 Aligned_cols=216 Identities=24% Similarity=0.271 Sum_probs=174.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~~g 770 (1293)
.+.++|+++.. +++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFY-------------GEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEE-------------CCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 46788887654 335699999999999999999999999999999999997643 13579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 841 (1293)
.++.. ..+++.++|++|++.+++. ||.||+.+....+.. .....+...+++++++.+|+.+ ..++.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 2345679999999988875 999999876543211 1122333455788999999964 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
++.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|.
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999865 789999999975 4667889999998
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 899998874
No 211
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.8e-35 Score=327.80 Aligned_cols=203 Identities=29% Similarity=0.439 Sum_probs=173.0
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lT 796 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.... ..++.++|++|++.+++.+|
T Consensus 11 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (237)
T TIGR00968 11 GSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLT 88 (237)
T ss_pred CCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcCEEEEecChhhccCCc
Confidence 445799999999999999999999999999999999998663 479999999876432 23467999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
+.||+.+....+ ........+.++++++.+++.+..++.++ .||+|||||++||++|+.+|++++|||||+|
T Consensus 89 ~~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrl~laral~~~p~llllDEP~~~ 160 (237)
T TIGR00968 89 VRDNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYPN-----QLSGGQRQRVALARALAVEPQVLLLDEPFGA 160 (237)
T ss_pred HHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999998765432 12233334567889999999877777654 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 877 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 161 LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 161 LDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 9999999999999998776 899999999975 56788999999985 899998885
No 212
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=329.83 Aligned_cols=215 Identities=20% Similarity=0.282 Sum_probs=174.4
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--CC-ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~~-~~~G~i~~~g~ 771 (1293)
++++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +. +.+|+|.++|.
T Consensus 5 l~~~nl~~~~-------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 71 (252)
T PRK14256 5 VKLEQLNVHF-------------GKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDT 71 (252)
T ss_pred EEEEEEEEEe-------------CCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCE
Confidence 5667766543 34569999999999999999999999999999999999754 21 24799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
++.. ...++.++|++|++.+++.+|++||+.+..... .....++..++++++++.+++.+ ..++.
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 145 (252)
T PRK14256 72 DIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLN--GRVNRSEADEIVESSLKRVALWDEVKDRLKSN---- 145 (252)
T ss_pred EcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCchhhhHHhhCC----
Confidence 7632 234567999999999999999999998754322 11123333445788899999854 22332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+
T Consensus 146 -~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 222 (252)
T PRK14256 146 -AMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM 222 (252)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999975 689999999975 56688999999974
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 223 -G~i~~~~~~ 231 (252)
T PRK14256 223 -GDLVECGET 231 (252)
T ss_pred -CEEEEeCCH
Confidence 899998885
No 213
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=346.18 Aligned_cols=191 Identities=25% Similarity=0.405 Sum_probs=166.6
Q ss_pred ceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 000773 725 EVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 725 ~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|++.++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998763 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
+||+.+... ....++++++++.+|+.+..++.++ +|||||||||+|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYPG-----SLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987531 0112357899999999888877655 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 878 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|+++
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999999865 899999999975 67788999999985 8999999863
No 214
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=334.38 Aligned_cols=210 Identities=24% Similarity=0.369 Sum_probs=170.6
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC------ceeEEEEEcCccCCh---hcccceEEEEcc
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG------YIEGDIRISGFPKKQ---ETFARISGYCEQ 787 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~------~~~G~i~~~g~~~~~---~~~~~~~~~v~q 787 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+... ..+++.++|++|
T Consensus 11 ~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q 90 (272)
T PRK13547 11 RRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQ 90 (272)
T ss_pred ECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecc
Confidence 34567999999999999999999999999999999999976532 127999999987532 234456899999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh----
Q 000773 788 NDIHSPQVTVKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELV---- 862 (1293)
Q Consensus 788 ~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~---- 862 (1293)
++..++.+||+||+.+....... .....++..++++++++.+|+.+..++.+. .|||||||||+||++|+
T Consensus 91 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~~~ 165 (272)
T PRK13547 91 AAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVT-----TLSGGELARVQFARVLAQLWP 165 (272)
T ss_pred cCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHHHHhcccc
Confidence 98766779999999875321110 011112233457889999999877776544 79999999999999999
Q ss_pred -----hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 863 -----ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 863 -----~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.+
T Consensus 166 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 166 PHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred ccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 599999999999999999999999999999876 899999999975 56678999999985 8999998864
No 215
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-35 Score=320.19 Aligned_cols=209 Identities=21% Similarity=0.329 Sum_probs=173.3
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC-C-C-ceeEEEEEcCccCC---hh---c-ccceEEEEccC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT-G-G-YIEGDIRISGFPKK---QE---T-FARISGYCEQN 788 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~-~-~-~~~G~i~~~g~~~~---~~---~-~~~~~~~v~q~ 788 (1293)
..++++||||++++||++||+|.|||||||+.++|.|..+ + + ..+|+|.++|.++. ++ . +.+.+++++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4579999999999999999999999999999999999765 2 3 35689999998642 22 1 23579999999
Q ss_pred C--CCCCCCCHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 789 D--IHSPQVTVKESLIYSAFLRLAKEV-SKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 789 ~--~~~~~lTv~e~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
+ .+.|.+||.+.+.-....+. .. .+++..+++.++++.+|+.+-....-. .+.+|||||||||.||.||+.+|
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~--~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~--YPhelSGGMrQRV~IAmala~~P 172 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHG--KGLSKKEAKERAIELLELVGIPDPERRLKS--YPHELSGGMRQRVMIAMALALNP 172 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhh--cchhhHHHHHHHHHHHHHcCCCCHHHHHhh--CCcccCCcHHHHHHHHHHHhCCC
Confidence 6 57899999988765544322 22 355666788999999999864322222 23489999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
++||.||||++||...+.+|+++|+++.+ .|.++|++|||+. -+.+.+|||.||.. |++++.|+.+
T Consensus 173 ~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMYa-G~iVE~g~~~ 239 (316)
T COG0444 173 KLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMYA-GRIVEEGPVE 239 (316)
T ss_pred CEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEEC-cEEEEeCCHH
Confidence 99999999999999999999999999986 4999999999986 47889999999985 9999999974
No 216
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=334.33 Aligned_cols=215 Identities=23% Similarity=0.347 Sum_probs=177.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
-+.++|+++... .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~-----------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYP-----------NSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcC-----------CCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 367777776431 0235699999999999999999999999999999999998663 479999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 774 KQ---ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
.. ..+++.++|++|++. .++.+||+||+.+..... ....++...+++++++.+|+.+..++.++ .|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEPQ-----NLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCcc-----cCCH
Confidence 43 234567999999974 677899999998764322 12334444567899999999887777654 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++ ++ ..+|++++|.+ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999776 589999999976 34 57999999975 89998
Q ss_pred eCCC
Q 000773 929 SGPL 932 (1293)
Q Consensus 929 ~g~~ 932 (1293)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 217
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=338.68 Aligned_cols=222 Identities=16% Similarity=0.218 Sum_probs=175.5
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC--CceeEEEEEcCcc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIRISGFP 772 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~--~~~~G~i~~~g~~ 772 (1293)
++++|++...... .+.+.+|+||||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 5677776654321 1235699999999999999999999999999999999997642 2357999999987
Q ss_pred CCh---hc----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCccc---ccc
Q 000773 773 KKQ---ET----FARISGYCEQNDI--HSPQVTVKESLIYSAFLRLAKE---VSKEDKIIFVEEVMDLVELESL---KDA 837 (1293)
Q Consensus 773 ~~~---~~----~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~---~~~ 837 (1293)
+.. .. +++.++||+|++. +.|.+||.+++........... ...++..+++.++++.+||.+. .++
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 11 1346999999975 6788999999975422111000 1112334567899999999753 344
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhH
Q 000773 838 IVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 916 (1293)
Q Consensus 838 ~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~ 916 (1293)
.+ .+|||||||||+||+||+.+|++|+|||||+|||+.++.+++++|+++.++ |.|||++||+++ .+.+.+|+
T Consensus 155 ~p-----~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 FP-----YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred Cc-----hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 43 479999999999999999999999999999999999999999999999875 899999999975 46678999
Q ss_pred hheeecCcEEEEeCCC
Q 000773 917 LLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 917 v~~l~~~G~~~~~g~~ 932 (1293)
+++|.+ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999985 999999985
No 218
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=330.06 Aligned_cols=208 Identities=27% Similarity=0.368 Sum_probs=171.6
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 68 (241)
T PRK14250 4 IEFKEVSYSS-------------FGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIK 68 (241)
T ss_pred EEEEeEEEEe-------------CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5666766543 34569999999999999999999999999999999999865 35799999998753
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000773 775 Q---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgG 850 (1293)
. ...++.++|++|++.+++ .||+||+.+....+ . . ...++.++++.+|+. +..++.+ ..||||
T Consensus 69 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G 135 (241)
T PRK14250 69 TIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRDV-----KNLSGG 135 (241)
T ss_pred hcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCCc-----ccCCHH
Confidence 2 234567999999998886 69999987643221 1 1 123467889999996 4555544 379999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..
T Consensus 136 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (241)
T PRK14250 136 EAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEY 213 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 999999999999999999999999999999999999999998764 899999999975 56778999999985 899988
Q ss_pred CCC
Q 000773 930 GPL 932 (1293)
Q Consensus 930 g~~ 932 (1293)
|++
T Consensus 214 ~~~ 216 (241)
T PRK14250 214 AKT 216 (241)
T ss_pred CCH
Confidence 875
No 219
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=316.43 Aligned_cols=189 Identities=57% Similarity=0.944 Sum_probs=158.6
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++..... .+++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~ 74 (192)
T cd03232 4 LTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD 74 (192)
T ss_pred EEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH
Confidence 5677877655310 0124699999999999999999999999999999999996432245899999998764
Q ss_pred hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000773 775 QETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKR 854 (1293)
Q Consensus 775 ~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 854 (1293)
...++.++|++|++.+++.+|++||+.+.... + +||||||||
T Consensus 75 -~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~qr 116 (192)
T cd03232 75 -KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRKR 116 (192)
T ss_pred -HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhHH
Confidence 33456799999999999999999999864210 0 399999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 855 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 855 v~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++.++.+.+|++++|.++|++++.|
T Consensus 117 v~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 117 LTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999887799999999998634678899999997548998865
No 220
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=337.01 Aligned_cols=219 Identities=19% Similarity=0.310 Sum_probs=174.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.+.++|+++...... ...+.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 367788876542100 0013599999999999999999999999999999999998763 479999999875
Q ss_pred C--------hhcccceEEEEccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000773 774 K--------QETFARISGYCEQNDIH-SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPG 843 (1293)
Q Consensus 774 ~--------~~~~~~~~~~v~q~~~~-~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~ 843 (1293)
. ....++.++|++|++.. +...||+||+.+..... ....++..++++++++.+++. +..++.++
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~--- 149 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSPF--- 149 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCChh---
Confidence 2 12345679999999732 23469999998764321 123344445678899999994 56666544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+
T Consensus 150 --~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 150 --ELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred --hCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 79999999999999999999999999999999999999999999998764 899999999975 56788999999985
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 899988875
No 221
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=325.62 Aligned_cols=199 Identities=26% Similarity=0.373 Sum_probs=170.6
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHH
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVTVKES 800 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lTv~e~ 800 (1293)
+|+|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 8999999999999999999999999999999999866 3579999999876431 234579999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000773 801 LIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 880 (1293)
Q Consensus 801 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~ 880 (1293)
+.+..... .....+..+.+.++++.+|+.+..++.+. .||||||||++||+||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKPE-----TLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCcc-----cCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764322 12233344457889999999887777654 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 881 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 881 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 899999999975 56778999999985 899988875
No 222
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=328.24 Aligned_cols=221 Identities=21% Similarity=0.237 Sum_probs=176.5
Q ss_pred ceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEE
Q 000773 692 PLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRI 768 (1293)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~ 768 (1293)
+..+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (267)
T PRK14237 18 EIALSTKDLHVYY-------------GKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILY 84 (267)
T ss_pred CeEEEEeeEEEEE-------------CCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEE
Confidence 3457788887654 345699999999999999999999999999999999997642 145899999
Q ss_pred cCccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000773 769 SGFPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPG 843 (1293)
Q Consensus 769 ~g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 843 (1293)
+|.+... ...++.++|++|++.+++ .||+||+.+..... .....++...++.++++.+++.+..+.... ..
T Consensus 85 ~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~ 160 (267)
T PRK14237 85 RGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH-KS 160 (267)
T ss_pred CCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc-CC
Confidence 9987632 123567999999988887 59999998764321 112233344567888999998532111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++ ++.|||++||+++ ++.+.+|++++|.+
T Consensus 161 ~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~- 237 (267)
T PRK14237 161 ALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL- 237 (267)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999986 4799999999975 57788999999975
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 238 G~i~~~g~~ 246 (267)
T PRK14237 238 GDLIEYDKT 246 (267)
T ss_pred CEEEEeCCH
Confidence 899999885
No 223
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=329.08 Aligned_cols=209 Identities=20% Similarity=0.284 Sum_probs=166.7
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--CC-ceeEEEEEcCccCCh-----hcccceEEEEccCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIRISGFPKKQ-----ETFARISGYCEQND 789 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~~-~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~ 789 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|... +. +.+|+|.++|.++.. ...++.++|++|++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 95 (251)
T PRK14244 16 GSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKP 95 (251)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCc
Confidence 34569999999999999999999999999999999999754 21 357999999987532 12456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
.+++. ||+||+.+....+.. ....++....++++++.+|+.+....... ..+.+||||||||++|||+|+.+|++|+
T Consensus 96 ~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lll 172 (251)
T PRK14244 96 NPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFELSGGQQQRLCIARAIAVKPTMLL 172 (251)
T ss_pred ccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88886 999999876433211 11222333457788999998652111111 1234799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 173 lDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 173 MDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999985 4899999999975 56778999999985 899988875
No 224
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=282.97 Aligned_cols=212 Identities=25% Similarity=0.344 Sum_probs=179.5
Q ss_pred ccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC------h---hcccce
Q 000773 711 KEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK------Q---ETFARI 781 (1293)
Q Consensus 711 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~------~---~~~~~~ 781 (1293)
++.+..||..++|.||+++.+.||.+.++||||||||||++.|.-... +.+|+..|.|...+ . ...++.
T Consensus 6 ~~in~~yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~fd~s~~~~~k~i~~lr~~ 83 (242)
T COG4161 6 NGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRDLRRN 83 (242)
T ss_pred cccccccccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEecccccccccCccHHHHHHHHHh
Confidence 455567788999999999999999999999999999999999986544 34788888775321 1 235678
Q ss_pred EEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000773 782 SGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVEL 861 (1293)
Q Consensus 782 ~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL 861 (1293)
+|+|+|+-.++|.+||.|||.-+. ++. ...++++.+.++.++++.+.|.+.+|+..- .|||||+|||+|||||
T Consensus 84 vgmvfqqy~lwphltv~enlieap-~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~pl-----hlsggqqqrvaiaral 156 (242)
T COG4161 84 VGMVFQQYNLWPHLTVQENLIEAP-CRV-LGLSKDQALARAEKLLKRLRLKPYADRYPL-----HLSGGQQQRVAIARAL 156 (242)
T ss_pred hhhhhhhhccCchhHHHHHHHhhh-HHH-hCCCHHHHHHHHHHHHHHhccccccccCce-----ecccchhhhHHHHHHH
Confidence 999999999999999999996532 232 235677777888999999999999998754 6999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 862 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 862 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+.+|++|++||||+.|||+-..+++++|++++..|.|-++++|..+ -....+.+++.|. .|+|++.|+.+
T Consensus 157 mmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~-va~k~as~vvyme-~g~ive~g~a~ 226 (242)
T COG4161 157 MMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVE-VARKTASRVVYME-NGHIVEQGDAS 226 (242)
T ss_pred hcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehh-HHHhhhhheEeee-cCeeEeecchh
Confidence 9999999999999999999999999999999999999999999754 2345578888887 59999999854
No 225
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=326.20 Aligned_cols=196 Identities=23% Similarity=0.315 Sum_probs=166.2
Q ss_pred ceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHHHHH
Q 000773 725 EVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE-TFARISGYCEQNDIHSPQVTVKESLIY 803 (1293)
Q Consensus 725 ~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~lTv~e~l~~ 803 (1293)
||||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999866 3579999999875431 124569999999999999999999976
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000773 804 SAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 883 (1293)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~ 883 (1293)
...... ... +....+++++++.+|+.+..++.+. .||||||||++||+|++.+|++++|||||+|||+.++.
T Consensus 95 ~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPGL--KLN-AAQREKLHAIARQMGIEDLLARLPG-----QLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred cccccc--CCC-HHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 532111 111 2234557899999999887777765 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 884 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 884 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
.+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999998764 899999999975 56778999999985 899998875
No 226
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=334.41 Aligned_cols=219 Identities=21% Similarity=0.297 Sum_probs=177.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++..+... ..+++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i~ 75 (280)
T PRK13633 5 IKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDTS 75 (280)
T ss_pred EEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecc
Confidence 56777776542100 00135699999999999999999999999999999999998763 5799999998764
Q ss_pred h----hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 775 Q----ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 775 ~----~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
. ...++.+||++|++. .+...||.|++.|..... .....+..++++++++.+||.+..++.++ +|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~ 147 (280)
T PRK13633 76 DEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAPH-----LLSG 147 (280)
T ss_pred ccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCH
Confidence 2 234567999999974 233469999998864322 22344445568899999999988887765 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++. .+|++++|.+ |++++
T Consensus 148 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~~ 224 (280)
T PRK13633 148 GQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVVM 224 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 999999999976 344 4999999985 89999
Q ss_pred eCCCC
Q 000773 929 SGPLG 933 (1293)
Q Consensus 929 ~g~~~ 933 (1293)
.|+++
T Consensus 225 ~g~~~ 229 (280)
T PRK13633 225 EGTPK 229 (280)
T ss_pred ecCHH
Confidence 98853
No 227
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-35 Score=342.44 Aligned_cols=214 Identities=27% Similarity=0.501 Sum_probs=178.4
Q ss_pred cceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcC
Q 000773 691 TPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG 770 (1293)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g 770 (1293)
.++.+..+|+++..+ +++++++|+|+++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 345666678877653 234799999999999999999999999999999999998874 589999999
Q ss_pred ccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccC
Q 000773 771 FPKK---QETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLK------DAIVGL 841 (1293)
Q Consensus 771 ~~~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~------~~~~~~ 841 (1293)
.+.. ...+++.++||+|++.+++. |++||+.++. .+.++++ +.++++..|+.+.. |+.+|+
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~-----~~~s~e~----i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR-----PDASDEE----IIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC-----CcCCHHH----HHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 45688999999999998875 9999998742 1223333 56777777776654 445553
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
+.++|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++|||++||++ .....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl--~~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRL--EDAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcCh--HHHhcCCEEEEec
Confidence 4578999999999999999999999999999999999999999999999986 59999999986 4667899999998
Q ss_pred cCcEEEEeCCCC
Q 000773 922 RGGQVIYSGPLG 933 (1293)
Q Consensus 922 ~~G~~~~~g~~~ 933 (1293)
+ |+++..|..+
T Consensus 529 ~-G~l~~~g~~~ 539 (559)
T COG4988 529 N-GRLVEQGTHE 539 (559)
T ss_pred C-CceeccCCHH
Confidence 5 8999999864
No 228
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=328.43 Aligned_cols=215 Identities=22% Similarity=0.246 Sum_probs=173.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g 770 (1293)
.+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWY-------------GEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEE-------------CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 35667776543 3456999999999999999999999999999999999975431 2579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 841 (1293)
.++.. ...++.++|++|++.+++ +|++||+.+...... ....++...+++++++.+++.+ ..++.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 123567999999998887 899999987653321 1123333455778899998742 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
...||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 347999999999999999999999999999999999999999999999876 689999999975 5677899999997
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 899998885
No 229
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3e-35 Score=331.67 Aligned_cols=223 Identities=18% Similarity=0.261 Sum_probs=176.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++....+.. ....+.+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 577777765521100 0001134699999999999999999999999999999999998763 5799999998764
Q ss_pred h---hcccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000773 775 Q---ETFARISGYCEQNDI--HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLS 848 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lS 848 (1293)
. ...++.++|++|++. +++.+|+.|++.+...... .....+..+.++++++.+|+. +..++.+. .||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYPH-----MLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCch-----hcC
Confidence 2 122356999999975 5788899999987644321 122333345678999999994 55555443 799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEE
Q 000773 849 IEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI 927 (1293)
Q Consensus 849 gGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~ 927 (1293)
|||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 56677999999985 8999
Q ss_pred EeCCC
Q 000773 928 YSGPL 932 (1293)
Q Consensus 928 ~~g~~ 932 (1293)
..|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88874
No 230
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=329.83 Aligned_cols=214 Identities=21% Similarity=0.282 Sum_probs=173.1
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--CC-ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~~-~~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +. +.+|+|.++|.
T Consensus 13 l~i~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~ 79 (259)
T PRK14274 13 YQINGMNLWY-------------GQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGS 79 (259)
T ss_pred EEEeeEEEEE-------------CCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCE
Confidence 6777776543 34569999999999999999999999999999999999754 21 14799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
+... ...++.+||++|++.+++. ||+||+.+....+ .....++..++++++++.+++.+ ..++.
T Consensus 80 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~---- 152 (259)
T PRK14274 80 NILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIH--GTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ---- 152 (259)
T ss_pred EccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCchhhhhhhhCC----
Confidence 7631 2345679999999988875 9999998764322 11123333455778899998853 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
..+||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+
T Consensus 153 -~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~ 229 (259)
T PRK14274 153 -ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM 229 (259)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999865 799999999975 56788999999975
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|+++..|++
T Consensus 230 -G~i~~~g~~ 238 (259)
T PRK14274 230 -GELVECNDT 238 (259)
T ss_pred -CEEEEECCH
Confidence 899999885
No 231
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=5.6e-34 Score=360.86 Aligned_cols=123 Identities=26% Similarity=0.344 Sum_probs=102.7
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CEEE
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANP---SIIF 869 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p---~ill 869 (1293)
++||.|++.|...+. + .....+.++.+||.. ..++.+. .||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~------~---i~~~l~~L~~vgL~~l~l~~~~~-----tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP------K---IARKLQTLVDVGLGYIKLGQPAT-----TLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch------h---hhHHHHHHHHCCCCcccccCCcc-----cCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988865432 1 122467899999976 3455543 79999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee-----cCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-----~~G~~~~~g~~ 932 (1293)
|||||+|||+.+...+++.|+++.++|.|||+++|+++ ....+|+++.|. ++|++++.|++
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999864 457899999994 46999999985
No 232
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=331.59 Aligned_cols=214 Identities=21% Similarity=0.248 Sum_probs=172.0
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~~g 770 (1293)
.+.++|+++.. +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISY-------------GTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEE-------------CCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 46778877654 335699999999999999999999999999999999997542 13579999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000773 771 FPKK-----QETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGL 841 (1293)
Q Consensus 771 ~~~~-----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 841 (1293)
.+.. ....++.++|++|++.+++. ||+||+.+.+..+. ... +..++++++++.+++. +..++.
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~--- 151 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFPK-SIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES--- 151 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccchh-hHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC---
Confidence 8753 12345679999999988884 99999988654321 112 2233467788888774 233433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++...+|++++|.
T Consensus 152 --~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 152 --GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 347999999999999999999999999999999999999999999999864 799999999975 5778899999998
Q ss_pred c----------CcEEEEeCCC
Q 000773 922 R----------GGQVIYSGPL 932 (1293)
Q Consensus 922 ~----------~G~~~~~g~~ 932 (1293)
+ .|++++.|++
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccccccceEEEeCCH
Confidence 5 2678888875
No 233
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=330.94 Aligned_cols=216 Identities=24% Similarity=0.308 Sum_probs=177.6
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++.... +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 3677777765421 123589999999999999999999999999999999998763 579999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 774 KQ---ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
.. ...++.++|++|++. +++..|+.+|+.+..... ....++..++++++++.+|+.+..++.++ .|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEPN-----ALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCcc-----cCCH
Confidence 42 234567999999975 677889999998764322 12333344567889999999887776654 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++. .+|++++|.+ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 454 4999999985 89999
Q ss_pred eCCCC
Q 000773 929 SGPLG 933 (1293)
Q Consensus 929 ~g~~~ 933 (1293)
.|+.+
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 98864
No 234
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.5e-35 Score=320.52 Aligned_cols=200 Identities=25% Similarity=0.359 Sum_probs=165.7
Q ss_pred cccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCC
Q 000773 710 MKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQND 789 (1293)
Q Consensus 710 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~ 789 (1293)
+++++++++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+..
T Consensus 25 ~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~ 93 (224)
T cd03220 25 ILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGG 93 (224)
T ss_pred hhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccc
Confidence 4566677888899999999999999999999999999999999999866 358999999976421 11123
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
.+.+.+||+||+.+...... ....+..++++++++.+++.+..++.++ +||||||||++|||+|+.+|++++
T Consensus 94 ~~~~~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~lll 165 (224)
T cd03220 94 GFNPELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPVK-----TYSSGMKARLAFAIATALEPDILL 165 (224)
T ss_pred cCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEE
Confidence 45578999999987654321 2233334457889999999887777655 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 166 lDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 166 IDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999998777899999999975 56678999999975 8887754
No 235
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=332.65 Aligned_cols=216 Identities=25% Similarity=0.337 Sum_probs=177.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCc-eeEEEEEcCccC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGY-IEGDIRISGFPK 773 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~-~~G~i~~~g~~~ 773 (1293)
++++|+++..+. ..+.+|++||+++++||++||+||||||||||+++|+|..++.. ..|+|.++|.+.
T Consensus 6 l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~ 74 (282)
T PRK13640 6 VEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITL 74 (282)
T ss_pred EEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEEC
Confidence 677777765421 12459999999999999999999999999999999999765321 138999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000773 774 KQ---ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 849 (1293)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++..++++++++.+||.+..++.+. .|||
T Consensus 75 ~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LS~ 146 (282)
T PRK13640 75 TAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEPA-----NLSG 146 (282)
T ss_pred CcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCcc-----cCCH
Confidence 43 234567999999974 677899999998754322 23445555668899999999887777654 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+ ..+|++++|.+ |++++
T Consensus 147 G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~~ 223 (282)
T PRK13640 147 GQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLLA 223 (282)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 899999999975 34 67999999975 89999
Q ss_pred eCCC
Q 000773 929 SGPL 932 (1293)
Q Consensus 929 ~g~~ 932 (1293)
.|++
T Consensus 224 ~g~~ 227 (282)
T PRK13640 224 QGSP 227 (282)
T ss_pred eCCH
Confidence 9985
No 236
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=328.10 Aligned_cols=214 Identities=25% Similarity=0.295 Sum_probs=171.5
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--CC-ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~~-~~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~ 72 (252)
T PRK14239 6 LQVSDLSVYY-------------NKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGH 72 (252)
T ss_pred EEEEeeEEEE-------------CCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCE
Confidence 5677776543 34569999999999999999999999999999999999632 21 24799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
+... ..+++.++|++|++.+++ +||+||+.+....+. ....+.....++++++.+++.+ ..++.
T Consensus 73 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 145 (252)
T PRK14239 73 NIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS---- 145 (252)
T ss_pred ECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC----
Confidence 7631 124567999999998887 899999987643321 1122223345678888888743 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.+
T Consensus 146 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~ 222 (252)
T PRK14239 146 -ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD 222 (252)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999865 699999999975 57788999999985
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 223 -G~i~~~g~~ 231 (252)
T PRK14239 223 -GDLIEYNDT 231 (252)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 237
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=327.14 Aligned_cols=214 Identities=22% Similarity=0.294 Sum_probs=172.0
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14240 4 ISVKDLDLFY-------------GDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQ 70 (250)
T ss_pred EEEEEEEEEE-------------CCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCE
Confidence 5666766543 3456999999999999999999999999999999999964321 24799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
+... ...++.++|++|++.+++ +|++||+.+....+. ....++..+.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~---- 143 (250)
T PRK14240 71 DIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS---- 143 (250)
T ss_pred EccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC----
Confidence 7642 124567999999998887 899999988643321 1123333455778888888742 23443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.+
T Consensus 144 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~~ 220 (250)
T PRK14240 144 -ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFLN 220 (250)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999854 799999999975 56778999999985
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 221 -G~i~~~~~~ 229 (250)
T PRK14240 221 -GEIVEFGDT 229 (250)
T ss_pred -CEEEEeCCH
Confidence 899988874
No 238
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=362.35 Aligned_cols=210 Identities=26% Similarity=0.350 Sum_probs=176.2
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+||++++||++||+|||||||||||++|+|..++ .+|+|.++|.+.... ..++.++|++|++.++
T Consensus 14 ~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (501)
T PRK10762 14 FPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLI 91 (501)
T ss_pred eCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCHHHHHhCCEEEEEcchhcc
Confidence 3446799999999999999999999999999999999998763 479999999875321 1245699999999999
Q ss_pred CCCCHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 793 PQVTVKESLIYSAFLRL-AKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
+.+||+||+.+....+. ......++..++++++++.+|+.+..++.++ .|||||||||+||+||+.+|++|+||
T Consensus 92 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLD 166 (501)
T PRK10762 92 PQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVG-----ELSIGEQQMVEIAKVLSFESKVIIMD 166 (501)
T ss_pred CCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999987543211 0112233334567899999999988777765 69999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRN 935 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~ 935 (1293)
|||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |+++..|+.++.
T Consensus 167 EPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~ 228 (501)
T PRK10762 167 EPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAEREVADL 228 (501)
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEecCcCcC
Confidence 999999999999999999999877999999999975 57788999999985 899999987643
No 239
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5e-35 Score=322.87 Aligned_cols=201 Identities=23% Similarity=0.314 Sum_probs=166.0
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC--ceeEEEEEcCccCChhcc-cceEEEEccCCC--CCCCCC
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG--YIEGDIRISGFPKKQETF-ARISGYCEQNDI--HSPQVT 796 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~--~~~G~i~~~g~~~~~~~~-~~~~~~v~q~~~--~~~~lT 796 (1293)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999986531 157999999987654322 357999999984 567899
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE---SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~---~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
+.|++.+...... ...++..++++++++.+++. +..++.+ ..|||||||||+|||||+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999976543221 11233345678999999997 3445544 37999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999975 56678999999975 899988875
No 240
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.9e-36 Score=300.41 Aligned_cols=193 Identities=21% Similarity=0.361 Sum_probs=167.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcccc----ceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQ----KTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~----~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++++|||||||||.+.++.|+++|+ +|+|.+||.+++..... .-+||+||++..|..|||+|||.-..+.+.
T Consensus 32 iVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~ 108 (243)
T COG1137 32 IVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIRE 108 (243)
T ss_pred EEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhh
Confidence 47899999999999999999999999 99999999999876543 347999999999999999999987766442
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
...+ ..+.+...+.+|++|+|.|.++++-.. ||||||||+.||
T Consensus 109 ~d~~--------------------------------~~~~~~~l~~LL~ef~i~hlr~~~a~s-----LSGGERRR~EIA 151 (243)
T COG1137 109 KDLK--------------------------------KAERKEELDALLEEFHITHLRDSKAYS-----LSGGERRRVEIA 151 (243)
T ss_pred cchh--------------------------------HHHHHHHHHHHHHHhchHHHhcCcccc-----cccchHHHHHHH
Confidence 1100 001233467899999999999887654 999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|||+.+|++++||||++|+||.+..+|.+.++.+.. +|.-|++| .|...|....|||..++++|++..+|+++++.+
T Consensus 152 RaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-rgiGvLIT-DHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 152 RALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-RGIGVLIT-DHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred HHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-CCceEEEc-cccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 999999999999999999999999999999999975 68999986 667789999999999999999999999999864
No 241
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=5.6e-35 Score=313.01 Aligned_cols=190 Identities=50% Similarity=0.853 Sum_probs=159.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCC--CCCceeEEEEEcCc
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRK--TGGYIEGDIRISGF 771 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~--~~~~~~G~i~~~g~ 771 (1293)
.++++++++...... +...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 467788776553100 001256999999999999999999999999999999999986 5 45899999998
Q ss_pred cCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000773 772 PKKQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQ 851 (1293)
Q Consensus 772 ~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 851 (1293)
+......++.++|++|++.+++.+|++||+.+..... .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445677999999999999999999997532100 399999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 852 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 852 rqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
|||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++.++.+.+|++++|.+ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999986457778999999985 8887654
No 242
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.9e-36 Score=367.48 Aligned_cols=215 Identities=28% Similarity=0.460 Sum_probs=177.1
Q ss_pred cceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcC
Q 000773 691 TPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG 770 (1293)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g 770 (1293)
..-.++++|++|+... ++..+|+|+|++|+|||.+||+|+||||||||+|+|.|..++ .+|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p--~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP--QQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECC
Confidence 3457899999988753 223699999999999999999999999999999999998774 589999999
Q ss_pred ccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCC-------ccccccccc
Q 000773 771 FPKKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVEL-------ESLKDAIVG 840 (1293)
Q Consensus 771 ~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l-------~~~~~~~~~ 840 (1293)
.+... ..+|+.+|||+|++.++. -|++||+.+.. ...+.++ +.++++..|. ..-.|+.+|
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhcccccccccc
Confidence 98643 567899999999998875 59999997642 2233333 2333333333 334567777
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhee
Q 000773 841 LPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 920 (1293)
Q Consensus 841 ~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 920 (1293)
+ +..+||||||||++|||||+++|+||+||||||+||+.+.+.|.+.|+++. +|+|+|+++|+++ ..+.+|++++|
T Consensus 605 E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 E-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred c-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 5 345899999999999999999999999999999999999999999999985 4799999999864 78899999999
Q ss_pred ecCcEEEEeCCCC
Q 000773 921 KRGGQVIYSGPLG 933 (1293)
Q Consensus 921 ~~~G~~~~~g~~~ 933 (1293)
++ |+++.+|+.+
T Consensus 681 ~~-Gkiv~~gs~~ 692 (709)
T COG2274 681 DQ-GKIVEQGSHE 692 (709)
T ss_pred cC-CceeccCCHH
Confidence 75 9999999964
No 243
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-35 Score=325.99 Aligned_cols=204 Identities=23% Similarity=0.244 Sum_probs=166.2
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCccCCh----hcccceEEEEccCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGFPKKQ----ETFARISGYCEQNDI 790 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~~ 790 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 93 (249)
T PRK14253 14 GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPN 93 (249)
T ss_pred CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCC
Confidence 4456999999999999999999999999999999999975531 357999999987531 234567999999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
+++ .||.||+.+..... .....+...+++.+.++.+++.+ ..++. ..+|||||||||+|||||+.+|+
T Consensus 94 ~~~-~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~ 165 (249)
T PRK14253 94 PFP-MSIYENVAYGLRAQ--GIKDKKVLDEVVERSLRGAALWDEVKDRLKSH-----AFGLSGGQQQRLCIARTIAMEPD 165 (249)
T ss_pred cCc-ccHHHHHHhHHHhc--CCCchHHHHHHHHHHHHHcCCchhhhHHhhcC-----cccCCHHHHHHHHHHHHHHcCCC
Confidence 887 89999998764322 11122233345677888888753 23333 34799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 166 llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 228 (249)
T PRK14253 166 VILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GELVEHDDT 228 (249)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999875 589999999975 56778999999985 899998874
No 244
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-35 Score=326.11 Aligned_cols=205 Identities=24% Similarity=0.292 Sum_probs=166.4
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCc---eeEEEEEcCccCCh-----hcccceEEEEccCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGY---IEGDIRISGFPKKQ-----ETFARISGYCEQND 789 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~---~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~ 789 (1293)
+++.+|+|+||++++||+++|+||||||||||+|+|+|..++.+ .+|+|.++|.+... ..+++.++|++|++
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (252)
T PRK14272 15 GDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKP 94 (252)
T ss_pred CCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccC
Confidence 34579999999999999999999999999999999999765322 37999999987532 13456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
.+++.+|+.||+.+...... ....++..+.++++++.+++. +..++. ++.||||||||++||++|+.+|
T Consensus 95 ~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p 167 (252)
T PRK14272 95 NPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP-----ATGLSGGQQQRLCIARALAVEP 167 (252)
T ss_pred ccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC-----cccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999987543221 112233334566777777653 233443 3479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ .+.+.+|++++|.+ |++++.|+.
T Consensus 168 ~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 231 (252)
T PRK14272 168 EILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFLV-GDLVEHGPT 231 (252)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999864 799999999975 56678999999985 899998875
No 245
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-35 Score=327.28 Aligned_cols=215 Identities=22% Similarity=0.284 Sum_probs=173.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC-c--eeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG-Y--IEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~-~--~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|.
T Consensus 8 l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~ 74 (259)
T PRK14260 8 IKVKDLSFYY-------------NTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQ 74 (259)
T ss_pred EEEEEEEEEE-------------CCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCE
Confidence 5677776543 3456999999999999999999999999999999999975532 2 4799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~ 842 (1293)
+... ...++.++|++|++.+++ +||+||+.+....+. ...+.+..+.++++++.+++. +..++.
T Consensus 75 ~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~---- 147 (259)
T PRK14260 75 NIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS---- 147 (259)
T ss_pred eccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC----
Confidence 7532 223567999999998887 899999987654321 112233334577888988884 233333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+
T Consensus 148 -~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~ 224 (259)
T PRK14260 148 -ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFST 224 (259)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEec
Confidence 347999999999999999999999999999999999999999999999865 699999999986 67788999999973
Q ss_pred ----CcEEEEeCCC
Q 000773 923 ----GGQVIYSGPL 932 (1293)
Q Consensus 923 ----~G~~~~~g~~ 932 (1293)
+|++++.|++
T Consensus 225 ~~~~~G~i~~~~~~ 238 (259)
T PRK14260 225 DESRIGQMVEFGVT 238 (259)
T ss_pred cCCCCceEEEeCCH
Confidence 4899999885
No 246
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-35 Score=362.34 Aligned_cols=209 Identities=26% Similarity=0.335 Sum_probs=174.8
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+|+||++++||+++|+||||||||||+|+|+|...+ .+|+|.++|.+.... ..++.++|++|++.++
T Consensus 15 ~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~ 92 (510)
T PRK09700 15 FGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINYNKLDHKLAAQLGIGIIYQELSVI 92 (510)
T ss_pred cCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEECCCCCHHHHHHCCeEEEeeccccc
Confidence 3456799999999999999999999999999999999998753 479999999876431 1235699999999999
Q ss_pred CCCCHHHHHHHHHHhc--CCC--CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 793 PQVTVKESLIYSAFLR--LAK--EVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~--~~~--~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
+.+||+||+.+..... ... ....++...+++++++.+|+.+..++.++ +|||||||||+||+||+.+|++|
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG~~qrv~ia~al~~~p~ll 167 (510)
T PRK09700 93 DELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVA-----NLSISHKQMLEIAKTLMLDAKVI 167 (510)
T ss_pred CCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchh-----hCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999998643211 000 01223334568899999999888787765 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
+|||||+|||+.++..+++.|++++++|+|||++||+++ .+...+|++++|.+ |++++.|++++
T Consensus 168 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~i~~~g~~~~ 231 (510)
T PRK09700 168 IMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GSSVCSGMVSD 231 (510)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEeeecchhh
Confidence 999999999999999999999999878999999999975 56678999999985 89999998754
No 247
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-35 Score=325.86 Aligned_cols=203 Identities=26% Similarity=0.333 Sum_probs=166.4
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCccCCh-----hcccceEEEEccCCC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGFPKKQ-----ETFARISGYCEQNDI 790 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~ 790 (1293)
++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+... ...++.++|++|++.
T Consensus 15 ~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14262 15 EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPT 94 (250)
T ss_pred CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCc
Confidence 456999999999999999999999999999999999975421 257999999987532 123567999999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPS 866 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ 866 (1293)
+++ .|++||+.+...... ....+...+.++++++.+++.+ ..++. ..+||||||||++||+||+.+|+
T Consensus 95 ~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LS~Gq~qr~~la~al~~~p~ 166 (250)
T PRK14262 95 PFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP-----GTRLSGGQQQRLCIARALAVEPE 166 (250)
T ss_pred cCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC-----hhhcCHHHHHHHHHHHHHhCCCC
Confidence 887 899999987643321 1122233345678888888854 23333 34799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 167 llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14262 167 VILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GELIEYGPT 229 (250)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 9999999999999999999999999865 799999999975 57788999999985 899988875
No 248
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.1e-33 Score=370.77 Aligned_cols=135 Identities=21% Similarity=0.266 Sum_probs=107.5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-KDAIVGLPGVTGLSIEQRKRLTIAVELV---ANPS 866 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~aL~---~~p~ 866 (1293)
.+...||.|+|.+...-........++..+++ ++++.+||.+. .++.+. +||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~~-----tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPLS-----SLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCccc-----cCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45678999999876542211111223333445 57889999875 566544 79999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee-----cCcEEEEeCCCC
Q 000773 867 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGQVIYSGPLG 933 (1293)
Q Consensus 867 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-----~~G~~~~~g~~~ 933 (1293)
+++|||||+|||+.+...+++.|++++++|.|||+++|+++ ..+.+|++++|. ++|+++..|+++
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~--~i~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH--VVKVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999975 448899999995 358999999864
No 249
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.1e-35 Score=327.08 Aligned_cols=214 Identities=26% Similarity=0.312 Sum_probs=172.2
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCcc--
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP-- 772 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~-- 772 (1293)
++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 7 l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 71 (258)
T PRK11701 7 LSVRGLTKLY-------------GPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDGQ 71 (258)
T ss_pred EEEeeeEEEc-------------CCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCcccc
Confidence 5677776543 345699999999999999999999999999999999998663 47999999986
Q ss_pred ---CChh---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccc
Q 000773 773 ---KKQE---T----FARISGYCEQNDI--HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIV 839 (1293)
Q Consensus 773 ---~~~~---~----~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~ 839 (1293)
+... . .++.++|++|++. +.+.+|+.||+.+...... .....+....+.++++.+++.+ ..++.+
T Consensus 72 ~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK11701 72 LRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDLP 149 (258)
T ss_pred ccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCCC
Confidence 4321 1 2346999999974 6778899999876432111 1122233445788999999963 555544
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhh
Q 000773 840 GLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 918 (1293)
Q Consensus 840 ~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~ 918 (1293)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ .+...+|+++
T Consensus 150 -----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i~ 223 (258)
T PRK11701 150 -----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRLL 223 (258)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 379999999999999999999999999999999999999999999998765 899999999975 4666899999
Q ss_pred eeecCcEEEEeCCC
Q 000773 919 LLKRGGQVIYSGPL 932 (1293)
Q Consensus 919 ~l~~~G~~~~~g~~ 932 (1293)
+|.+ |++++.|+.
T Consensus 224 ~l~~-g~i~~~~~~ 236 (258)
T PRK11701 224 VMKQ-GRVVESGLT 236 (258)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 899998875
No 250
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=9.7e-35 Score=311.02 Aligned_cols=180 Identities=26% Similarity=0.329 Sum_probs=151.0
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-----hcccceEEEEccCCC-C
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-----ETFARISGYCEQNDI-H 791 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~-~ 791 (1293)
+++.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++. .
T Consensus 3 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 80 (190)
T TIGR01166 3 GGPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQ 80 (190)
T ss_pred CccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhc
Confidence 345699999999999999999999999999999999998763 47999999987531 123567999999973 3
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMD 871 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlD 871 (1293)
+...||+||+.+..... ....++..++++++++.+|+.+..++.+. .||||||||++|||||+.+|++++||
T Consensus 81 ~~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllD 152 (190)
T TIGR01166 81 LFAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPTH-----CLSGGEKKRVAIAGAVAMRPDVLLLD 152 (190)
T ss_pred cccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 33579999998864322 12333444567899999999887777654 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 907 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 907 (1293)
|||+|||+.++..+.+.|++++++|+|||++||+++
T Consensus 153 EPt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 153 EPTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 999999999999999999999877999999999864
No 251
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1e-34 Score=318.30 Aligned_cols=195 Identities=25% Similarity=0.388 Sum_probs=166.5
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh------cccceEEEEccCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE------TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~~ 793 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 569999999999999999999999999999999999765 3589999999875321 24567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
.+|+.||+.+...... ....++...+++++++.+|+.+..++.+. .||+|||||++|||+|+.+|++++||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYPH-----NLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988654321 12344445568899999999877776654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEE
Q 000773 874 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQV 926 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~ 926 (1293)
|+|||+.++..+.+.|+++++ .|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 999999999999999999876 4899999999964 5678999999975 664
No 252
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=326.66 Aligned_cols=215 Identities=24% Similarity=0.348 Sum_probs=177.2
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++.... ..++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~ 72 (277)
T PRK13642 5 LEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELLT 72 (277)
T ss_pred EEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEECC
Confidence 677777765421 012359999999999999999999999999999999999876 35799999998764
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 775 Q---ETFARISGYCEQNDI-HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
. ...++.+||++|++. .++..||.||+.+..... ....++..++++++++.+|+.+..++.+. .||||
T Consensus 73 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 144 (277)
T PRK13642 73 AENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREPA-----RLSGG 144 (277)
T ss_pred cCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCHH
Confidence 3 234567999999974 677889999998754321 12344444567899999999887777644 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++ ..+|++++|.+ |+++..
T Consensus 145 ~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (277)
T PRK13642 145 QKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIKE 221 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999875 999999999975 34 46999999985 899998
Q ss_pred CCC
Q 000773 930 GPL 932 (1293)
Q Consensus 930 g~~ 932 (1293)
|+.
T Consensus 222 g~~ 224 (277)
T PRK13642 222 AAP 224 (277)
T ss_pred CCH
Confidence 875
No 253
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.8e-35 Score=317.45 Aligned_cols=201 Identities=22% Similarity=0.287 Sum_probs=169.1
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
-+.++|++... +++.+++++||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSR-------------NEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEec-------------CCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 36677776543 345699999999999999999999999999999999998763 479999999876
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000773 774 KQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRK 853 (1293)
Q Consensus 774 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 853 (1293)
.....++.++|++|++.+++.+|++||+.+....+. ... .+.++++++.+++.+..++.++ .|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~---~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RRA---KQMPGSALAIVGLAGYEDTLVR-----QLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---CcH---HHHHHHHHHHcCChhhccCChh-----hCCHHHHH
Confidence 543334568999999999999999999987653321 111 2346788999999877777654 79999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 854 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 854 rv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
|++||++++.+|++++|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999986 6788899988875
No 254
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.4e-35 Score=334.12 Aligned_cols=211 Identities=26% Similarity=0.398 Sum_probs=174.7
Q ss_pred eeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCcc
Q 000773 693 LAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP 772 (1293)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~ 772 (1293)
-.++|+|++.++. +++++|+++||+|++||.+||+|+|||||||++|+|.+..+ .+|+|.+||.+
T Consensus 350 ~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~d 414 (591)
T KOG0057|consen 350 GSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQD 414 (591)
T ss_pred CcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCee
Confidence 3589999987653 23459999999999999999999999999999999999765 37999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000773 773 KKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLP 842 (1293)
Q Consensus 773 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 842 (1293)
+++ +..|+.|||||||..+|. -||.+|+.|+. ...+.++ |-++.+..|+.+ -..+.+|+.
T Consensus 415 ik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VGer 484 (591)
T KOG0057|consen 415 IKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVGER 484 (591)
T ss_pred HhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHhhc
Confidence 754 467889999999988875 49999998853 2233333 455566666544 334556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
...|||||||||+||||+++||+|+++|||||.||..+..++++.++.. ..|+|+|++.|+. +....||+|++|++
T Consensus 485 -G~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~n 560 (591)
T KOG0057|consen 485 -GLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLDN 560 (591)
T ss_pred -ccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEEC
Confidence 3469999999999999999999999999999999999999999999983 4589999999985 58899999999985
Q ss_pred CcEEEEeCCCC
Q 000773 923 GGQVIYSGPLG 933 (1293)
Q Consensus 923 ~G~~~~~g~~~ 933 (1293)
|++...|+.+
T Consensus 561 -G~v~e~gth~ 570 (591)
T KOG0057|consen 561 -GTVKEYGTHS 570 (591)
T ss_pred -CeeEEeccHH
Confidence 8999999864
No 255
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=325.09 Aligned_cols=214 Identities=22% Similarity=0.291 Sum_probs=171.1
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~~g 770 (1293)
.++++++++.. +++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~-------------~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFY-------------GDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEE-------------CCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 46777776543 345699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 841 (1293)
.+... ...++.++|++|++.+++. ||+||+.+....+. ... +..++++++++.+|+.+ ..++.
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87531 2345679999999988875 99999987654321 122 22345788999998853 33443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|+++++.
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 347999999999999999999999999999999999999999999999976 489999999975 5667789976543
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
++|+++..|+.
T Consensus 254 ~~G~i~~~g~~ 264 (285)
T PRK14254 254 TGGELVEFDDT 264 (285)
T ss_pred eCCEEEEeCCH
Confidence 35899988874
No 256
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.5e-35 Score=316.35 Aligned_cols=177 Identities=24% Similarity=0.324 Sum_probs=152.2
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~l 795 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (204)
T PRK13538 12 DERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTEL 89 (204)
T ss_pred CCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcccchHHhhhheEEeCCccccCcCC
Confidence 445699999999999999999999999999999999998763 47999999987542 23456789999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
|+.||+.+....+. . +..++++++++.+|+.+..++.++ .||||||||++||+||+++|++++|||||+
T Consensus 90 tv~e~l~~~~~~~~--~----~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~ 158 (204)
T PRK13538 90 TALENLRFYQRLHG--P----GDDEALWEALAQVGLAGFEDVPVR-----QLSAGQQRRVALARLWLTRAPLWILDEPFT 158 (204)
T ss_pred cHHHHHHHHHHhcC--c----cHHHHHHHHHHHcCCHHHhhCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999987653321 1 112457889999999877776654 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000773 876 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 907 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 907 (1293)
|||+.++..+.+.|++++++|+|||++||+++
T Consensus 159 ~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 190 (204)
T PRK13538 159 AIDKQGVARLEALLAQHAEQGGMVILTTHQDL 190 (204)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEecChh
Confidence 99999999999999998877899999999975
No 257
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=330.78 Aligned_cols=221 Identities=19% Similarity=0.245 Sum_probs=175.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~~g 770 (1293)
.+.++|+++.... +.+.+|+|+||+|++||++||+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 4788888876531 234699999999999999999999999999999999997532 23579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHH-HHHHHHHHHHHcCCcccccccccCCCC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKED-KIIFVEEVMDLVELESLKDAIVGLPGV 844 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~l~~~~~~~~~~~~~ 844 (1293)
.++.. ...++.++|+||++.+++ .|++||+.|..... ..++++ ..+.+.++++.+++.+-.++.++. ..
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 98742 234667999999998875 79999999764321 122222 233467788888875332233332 34
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||+++ .+.+.+|++++|.+ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999875 699999999975 45667999999985 8
Q ss_pred EEEEeCCCC
Q 000773 925 QVIYSGPLG 933 (1293)
Q Consensus 925 ~~~~~g~~~ 933 (1293)
+++..|++.
T Consensus 301 ~i~e~g~~~ 309 (329)
T PRK14257 301 WIEEAGETK 309 (329)
T ss_pred EEEEeCCHH
Confidence 999999863
No 258
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=327.10 Aligned_cols=219 Identities=23% Similarity=0.294 Sum_probs=175.1
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g 770 (1293)
.+..+|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGF-------------AGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEE-------------CCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 35777776654 3457999999999999999999999999999999999976531 3589999999
Q ss_pred ccCCh----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000773 771 FPKKQ----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTG 846 (1293)
Q Consensus 771 ~~~~~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 846 (1293)
.+... ...++.++|++|++.+++ .|++||+.+..... ...+.++....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234567999999998888 89999998764322 112333434456788899998653211111 12347
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEE
Q 000773 847 LSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQV 926 (1293)
Q Consensus 847 lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~ 926 (1293)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999975 56788999999985 899
Q ss_pred EEeCCC
Q 000773 927 IYSGPL 932 (1293)
Q Consensus 927 ~~~g~~ 932 (1293)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 998885
No 259
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=6.7e-35 Score=314.67 Aligned_cols=187 Identities=28% Similarity=0.324 Sum_probs=159.0
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ 794 (1293)
++++.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 10 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 87 (201)
T cd03231 10 RDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTT 87 (201)
T ss_pred eCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCC
Confidence 3456799999999999999999999999999999999998763 47999999987532 2345679999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+|++||+.+.... . ..++++++++.+|+.+..++.+. .||||||||++||+||+.+|++++|||||
T Consensus 88 ~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEPt 153 (201)
T cd03231 88 LSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPVA-----QLSAGQQRRVALARLLLSGRPLWILDEPT 153 (201)
T ss_pred cCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999874211 1 12346889999999887776654 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhee
Q 000773 875 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 920 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 920 (1293)
+|||+.++..+.+.|+++.++|+|+|++||++. +....+++++.+
T Consensus 154 ~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 154 TALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999998877999999999975 567777777665
No 260
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=323.92 Aligned_cols=215 Identities=22% Similarity=0.279 Sum_probs=174.1
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~~g 770 (1293)
.++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFY-------------GDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEE-------------CCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 46778887654 234699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 841 (1293)
.+... ...++.++|++|++.+++. |++||+.+...... ....++..+.++++++.+++.+ ..++.
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 165 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN--- 165 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC---
Confidence 87642 1345679999999988886 99999987643321 1122233345778888888853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|.
T Consensus 166 --~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 241 (272)
T PRK14236 166 --AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY 241 (272)
T ss_pred --cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999975 799999999975 5677899999998
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |+++..|+.
T Consensus 242 ~-G~i~~~g~~ 251 (272)
T PRK14236 242 M-GKLVEYGDT 251 (272)
T ss_pred C-CEEEecCCH
Confidence 5 899998875
No 261
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=328.79 Aligned_cols=215 Identities=21% Similarity=0.283 Sum_probs=171.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--C-CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~-~~~~G~i~~~g 770 (1293)
.+.++++++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYY-------------GEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 46777777643 33459999999999999999999999999999999999642 1 12579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 841 (1293)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. .+.....+++.++++.+|+. +..++.
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988875 999999886433211 12222334567888888874 333443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999865 689999999975 5677899999998
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 262
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=324.19 Aligned_cols=214 Identities=25% Similarity=0.268 Sum_probs=171.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 7 i~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 73 (253)
T PRK14261 7 LSTKNLNLWY-------------GEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGE 73 (253)
T ss_pred EEEeeeEEEE-------------CCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 5677776543 3456999999999999999999999999999999999964321 24799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
++.. ...++.++|++|++.+++. ||+||+.+....+.. ....+....+.++++.+++.+ ..++.
T Consensus 74 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~---- 146 (253)
T PRK14261 74 NIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS---- 146 (253)
T ss_pred EccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC----
Confidence 7542 2335679999999988885 999999986543211 122233345778888888743 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+
T Consensus 147 -~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~ 223 (253)
T PRK14261 147 -ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL 223 (253)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999875 689999999975 46678999999985
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 224 -G~i~~~g~~ 232 (253)
T PRK14261 224 -GKLIEFDKT 232 (253)
T ss_pred -CEEEEcCCH
Confidence 899988875
No 263
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=9.6e-35 Score=357.87 Aligned_cols=211 Identities=23% Similarity=0.353 Sum_probs=174.0
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQNDIHS 792 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~ 792 (1293)
++++.+|+||||++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.... ..++.+||++|++.++
T Consensus 11 ~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (500)
T TIGR02633 11 FGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLV 90 (500)
T ss_pred eCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccC
Confidence 345679999999999999999999999999999999999765423579999999876431 1235699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 793 PQVTVKESLIYSAFLRLAK-EVSKEDKIIFVEEVMDLVELESLK-DAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+.+||+||+.+........ ....++..++++++++.+|+.+.. ++.++ .|||||||||+||+||+.+|++|+|
T Consensus 91 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~qrv~iA~al~~~p~lllL 165 (500)
T TIGR02633 91 PELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVG-----DYGGGQQQLVEIAKALNKQARLLIL 165 (500)
T ss_pred CCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999998754322111 122333345678999999997654 44444 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|+.+.
T Consensus 166 DEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 166 DEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 9999999999999999999999888999999999975 56778999999985 89999888754
No 264
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=323.81 Aligned_cols=214 Identities=24% Similarity=0.297 Sum_probs=171.2
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC--C-ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~--~-~~~G~i~~~g~ 771 (1293)
+.++|+++.. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ . +.+|+|.++|.
T Consensus 5 l~~~~l~~~~-------------~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~ 71 (251)
T PRK14251 5 ISAKDVHLSY-------------GNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQ 71 (251)
T ss_pred EEEEeeEEEE-------------CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCE
Confidence 5677776543 345699999999999999999999999999999999997641 1 25799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
+... ...++.++|++|++.+++ .||+||+.+...... ....+...+.++++++.+++.. ..++.
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 144 (251)
T PRK14251 72 NIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN---- 144 (251)
T ss_pred EcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC----
Confidence 7532 124567999999998886 799999987543221 1122223345778889988842 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
..+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.+
T Consensus 145 -~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~~ 221 (251)
T PRK14251 145 -AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLMN 221 (251)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999854 799999999975 56778999999975
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 222 -G~i~~~~~~ 230 (251)
T PRK14251 222 -GDLIEAGPT 230 (251)
T ss_pred -CEEEEeCCH
Confidence 899988875
No 265
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=357.50 Aligned_cols=211 Identities=26% Similarity=0.343 Sum_probs=176.0
Q ss_pred ccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCCC
Q 000773 715 VAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQNDI 790 (1293)
Q Consensus 715 ~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~~ 790 (1293)
++++++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.
T Consensus 6 ~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~ 83 (491)
T PRK10982 6 KSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELN 83 (491)
T ss_pred EEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccc
Confidence 344556799999999999999999999999999999999998763 47999999987642 123456999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 791 HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 791 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+++.+||+||+.+............++..++++++++.+|+.+..++.++ +|||||||||+||+||+.+|++|+|
T Consensus 84 ~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qrv~lA~al~~~p~lllL 158 (491)
T PRK10982 84 LVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVA-----TLSVSQMQMIEIAKAFSYNAKIVIM 158 (491)
T ss_pred cccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999875321111011233334567899999999877777655 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGR 934 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~ 934 (1293)
||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |+++..|+.+.
T Consensus 159 DEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 159 DEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 9999999999999999999999878999999999975 56778999999985 89999998754
No 266
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=336.48 Aligned_cols=224 Identities=25% Similarity=0.388 Sum_probs=190.6
Q ss_pred ccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEc
Q 000773 711 KEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCE 786 (1293)
Q Consensus 711 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~ 786 (1293)
++.+++++..++|+||||++++||++||+|.||||||||+|+|+|... +.+|+|.++|++... .....-|+.|.
T Consensus 12 ~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~ 89 (500)
T COG1129 12 RGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATVH 89 (500)
T ss_pred ecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEEe
Confidence 455567788899999999999999999999999999999999999776 458999999987642 23445689999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRL-AKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
|+..+.|+|||.||+.++...+. ..-.+.+...+++.++++.+|+....++.++ +||+||||.|.|||||..++
T Consensus 90 QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~LsiaqrQ~VeIArAl~~~a 164 (500)
T COG1129 90 QELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLSIAQRQMVEIARALSFDA 164 (500)
T ss_pred echhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999987654433 2334556666778999999999644777766 69999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC-CC-ChhHHHHHH
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL-GR-NSHKVIEYY 943 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~-~~-~~~~~~~~~ 943 (1293)
+||+||||||.|+......+.+.+++++++|.+||++||.++ ++++.+||+.+|.+ |+.+..++. ++ ..+++.+..
T Consensus 165 rllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 165 RVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRLM 242 (500)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHHh
Confidence 999999999999999999999999999999999999999986 89999999999985 899988883 43 334555554
No 267
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=323.37 Aligned_cols=204 Identities=22% Similarity=0.245 Sum_probs=165.0
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCccCCh-----hcccceEEEEccCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGFPKKQ-----ETFARISGYCEQND 789 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~ 789 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+... ...++.++|++|++
T Consensus 15 ~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 94 (251)
T PRK14249 15 HKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQP 94 (251)
T ss_pred CCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCC
Confidence 3456999999999999999999999999999999999976532 236999999987532 13456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
.+++. |++||+.+....+.. ...++..+.++++++.+++.+ ..++. ..+||||||||++|||||+.+|
T Consensus 95 ~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~-----~~~LS~Gq~qrv~laral~~~p 166 (251)
T PRK14249 95 NPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHKS-----GLALSGGQQQRLCIARVLAIEP 166 (251)
T ss_pred ccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhCC-----cccCCHHHHHHHHHHHHHhcCC
Confidence 98875 999999876543211 112222344677788888753 23333 3479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
++++|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 ~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 230 (251)
T PRK14249 167 EVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GDLVEYGRT 230 (251)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-CeEEEeCCH
Confidence 9999999999999999999999999985 5899999999975 56677899999974 899998875
No 268
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=326.94 Aligned_cols=214 Identities=21% Similarity=0.276 Sum_probs=171.1
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--C-CceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~-~~~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|.
T Consensus 22 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 88 (268)
T PRK14248 22 LEVKDLSIYY-------------GEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGL 88 (268)
T ss_pred EEEEEEEEEe-------------CCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCE
Confidence 6777777643 34569999999999999999999999999999999999642 1 135799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~ 842 (1293)
+... ...++.++|++|++.+++. |++||+.+...... ..........+.+.++.+++. +..++.
T Consensus 89 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 161 (268)
T PRK14248 89 NILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS---- 161 (268)
T ss_pred EcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC----
Confidence 7632 1245679999999988875 99999987643221 111222234467788888874 233443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+
T Consensus 162 -~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~~ 238 (268)
T PRK14248 162 -ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFLN 238 (268)
T ss_pred -cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999865 689999999975 56778999999985
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 239 -G~i~~~~~~ 247 (268)
T PRK14248 239 -GDLVEYDQT 247 (268)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 269
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=326.42 Aligned_cols=218 Identities=25% Similarity=0.405 Sum_probs=171.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++... +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 467777776441 235699999999999999999999999999999999998663 579999999876
Q ss_pred ChhcccceEEEEccCCCCC--CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 774 KQETFARISGYCEQNDIHS--PQVTVKESLIYSAFLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 774 ~~~~~~~~~~~v~q~~~~~--~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
.....++.++|++|++.+. ...+++|++.+....... ......+...+++++++.+|+.+..++.++ .||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIG-----ELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcc-----cCCHH
Confidence 4322234689999997653 234788887653211000 001112223456788999999887777665 69999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999975 567788988655 4 8999988
Q ss_pred CCC
Q 000773 931 PLG 933 (1293)
Q Consensus 931 ~~~ 933 (1293)
+.+
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 865
No 270
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-35 Score=308.03 Aligned_cols=186 Identities=28% Similarity=0.434 Sum_probs=164.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-------ccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-------PQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+|||.|+||||||||+|+|+|+.+|+ +|.|.+||+.+.+.. .++++|||+|+-.+||.+||+.|+.|+..
T Consensus 26 vTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~~ 102 (352)
T COG4148 26 ITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGMW 102 (352)
T ss_pred eEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhhc
Confidence 58999999999999999999999999 999999998764422 35789999999999999999999999864
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
... ...-|.+.+.||++|..++..++ |||||||||
T Consensus 103 ~~~----------------------------------------~~~fd~iv~lLGI~hLL~R~P~~-----LSGGEkQRV 137 (352)
T COG4148 103 KSM----------------------------------------RAQFDQLVALLGIEHLLDRYPGT-----LSGGEKQRV 137 (352)
T ss_pred ccc----------------------------------------hHhHHHHHHHhCcHHHHhhCCCc-----cCcchhhHH
Confidence 210 01135678999999998876654 999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
+|+|||++.|++|+||||.+.||-....+++-.|++++++.+..|+.+ +|..+|+.+++|+|++|++|++...|+.+++
T Consensus 138 AIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYV-SHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v 216 (352)
T COG4148 138 AIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYV-SHSLDEVLRLADRVVVLENGKVKASGPLEEV 216 (352)
T ss_pred HHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEE-ecCHHHHHhhhheEEEecCCeEEecCcHHHH
Confidence 999999999999999999999999999999999999999888889886 5667899999999999999999999999988
Q ss_pred HH
Q 000773 234 LE 235 (1293)
Q Consensus 234 ~~ 235 (1293)
.+
T Consensus 217 ~~ 218 (352)
T COG4148 217 WG 218 (352)
T ss_pred hc
Confidence 64
No 271
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=338.38 Aligned_cols=191 Identities=27% Similarity=0.357 Sum_probs=164.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++.+.. .++.++||+|++.+++.+||+||+.|+.+..+..
T Consensus 32 ~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (356)
T PRK11650 32 FIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRGMP- 107 (356)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999988 999999999886533 3467999999999999999999999986532110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
. . +.+..++++++.+||++..++.++ .|||||||||+|||||
T Consensus 108 ---------~----------~--------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~QRvalARAL 149 (356)
T PRK11650 108 ---------K----------A--------------EIEERVAEAARILELEPLLDRKPR-----ELSGGQRQRVAMGRAI 149 (356)
T ss_pred ---------H----------H--------------HHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHHHHHHHHH
Confidence 0 0 011235678999999988887765 4999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||++||+.++..+.+.|+++.++.++|+|+++| +..++..++|++++|++|+++..|+++++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTH-d~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTH-DQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 99999999999999999999999999999998766899999755 557899999999999999999999998874
No 272
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=8.6e-35 Score=357.81 Aligned_cols=211 Identities=21% Similarity=0.354 Sum_probs=178.3
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+|+||++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 12 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 76 (510)
T PRK15439 12 LCARSISKQY-------------SGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPCA 76 (510)
T ss_pred EEEEeEEEEe-------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5677776543 445699999999999999999999999999999999998763 4799999998754
Q ss_pred hh---c-ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 775 QE---T-FARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~~---~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
.. . .++.+||++|++.+++.+||+||+.+... . .++..++++++++.+|+.+..++.++ +||||
T Consensus 77 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 144 (510)
T PRK15439 77 RLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSAG-----SLEVA 144 (510)
T ss_pred CCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCChh-----hCCHH
Confidence 21 1 23458999999999999999999987421 1 12223457889999999887777765 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
|||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|.+ |++++.|
T Consensus 145 ~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~g 222 (510)
T PRK15439 145 DRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALSG 222 (510)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999888999999999975 56778999999985 8999998
Q ss_pred CCCC
Q 000773 931 PLGR 934 (1293)
Q Consensus 931 ~~~~ 934 (1293)
+.++
T Consensus 223 ~~~~ 226 (510)
T PRK15439 223 KTAD 226 (510)
T ss_pred ChHH
Confidence 8753
No 273
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=324.07 Aligned_cols=221 Identities=22% Similarity=0.269 Sum_probs=174.6
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g 770 (1293)
.++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 7 ~l~~~nl~~~~-------------~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYY-------------DTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEe-------------CCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 36777777654 3346999999999999999999999999999999999976532 1369999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVT 845 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 845 (1293)
.+... ...++.++|++|++.+++ +|++||+.+...... ..+..+..+++.++++.+++.+..+.... ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87521 234567999999988888 899999987643221 11223334557889999988542111111 1234
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecC-
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG- 923 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~- 923 (1293)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ ++.+.+|++++|.++
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999875 4899999999975 577889999999742
Q ss_pred ---cEEEEeCCC
Q 000773 924 ---GQVIYSGPL 932 (1293)
Q Consensus 924 ---G~~~~~g~~ 932 (1293)
|++++.|++
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999886
No 274
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=323.23 Aligned_cols=208 Identities=20% Similarity=0.230 Sum_probs=169.0
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCccCCh-----hcccceEEEEccC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGFPKKQ-----ETFARISGYCEQN 788 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~ 788 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+... ...++.++|++|+
T Consensus 18 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 97 (261)
T PRK14263 18 YGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQ 97 (261)
T ss_pred eCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecC
Confidence 35567999999999999999999999999999999999976431 257999999987532 2345679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
+.++ .+|++||+.+....+. . ..+....++++++.+++.+..+...+ ...+.||||||||++|||||+++|++|
T Consensus 98 ~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~ll 171 (261)
T PRK14263 98 PNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVL 171 (261)
T ss_pred Cccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 9887 5999999988754331 1 12223457889999998543222221 124579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee-------cCcEEEEeCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-------RGGQVIYSGPL 932 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-------~~G~~~~~g~~ 932 (1293)
+|||||+|||+.++..+.+.|++++ +++|||+++|+++ ++.+.+|++++|. ++|+++..|+.
T Consensus 172 llDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 172 LLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 9999999999999999999999986 4799999999975 5778899999996 35999999885
No 275
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.9e-34 Score=320.57 Aligned_cols=213 Identities=20% Similarity=0.264 Sum_probs=171.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC--ceeEEEEEcCc
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG--YIEGDIRISGF 771 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~--~~~G~i~~~g~ 771 (1293)
.++++|+++.. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~--------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQA--------------AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEe--------------ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 46677776543 235899999999999999999999999999999999986531 15799999998
Q ss_pred cCChhc-ccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCC
Q 000773 772 PKKQET-FARISGYCEQNDI--HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES---LKDAIVGLPGVT 845 (1293)
Q Consensus 772 ~~~~~~-~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---~~~~~~~~~~~~ 845 (1293)
++.... .++.++|++|++. +.+.+|+.+++.+.+.... .... ..++.++++.+++.+ ..++.+ .
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~~-----~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPAD--DATLTAALEAVGLENAARVLKLYP-----F 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CChH--HHHHHHHHHHcCCCChhhhhhcCC-----c
Confidence 764322 2356999999974 4567899998866432211 1122 245788999999976 334443 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999975 46678999999975 8
Q ss_pred EEEEeCCC
Q 000773 925 QVIYSGPL 932 (1293)
Q Consensus 925 ~~~~~g~~ 932 (1293)
+++..|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 99998875
No 276
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-34 Score=355.44 Aligned_cols=216 Identities=28% Similarity=0.463 Sum_probs=178.1
Q ss_pred cceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcC
Q 000773 691 TPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG 770 (1293)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g 770 (1293)
....++|+||+++++..+ +..||+|+|+.|++||.+||+|||||||||++++|.+..+ |.+|+|.+||
T Consensus 347 ~~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcC
Confidence 345789999999876543 4569999999999999999999999999999999999877 4589999999
Q ss_pred ccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-------cCCccccccccc
Q 000773 771 FPKKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDL-------VELESLKDAIVG 840 (1293)
Q Consensus 771 ~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-------l~l~~~~~~~~~ 840 (1293)
.+++. ..++..+|.|.|+|.++ ..|++||+.|+. .+.+.++ ++++.+. ..|.+-.|+.+|
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~-----~dat~~~----i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGK-----PDATREE----IEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCC-----CcccHHH----HHHHHHHccHHHHHHhhHHhhccccc
Confidence 98754 34567899999999776 579999998741 1223332 2333333 234556688888
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhee
Q 000773 841 LPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 920 (1293)
Q Consensus 841 ~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 920 (1293)
..++ +||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +|+|.|+++|+++ ..+.+|++++|
T Consensus 485 e~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS--tIrnaD~I~v~ 560 (1228)
T KOG0055|consen 485 ERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS--TIRNADKIAVM 560 (1228)
T ss_pred CCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh--hhhccCEEEEE
Confidence 6554 599999999999999999999999999999999999999999998865 5899999999975 55669999999
Q ss_pred ecCcEEEEeCCCC
Q 000773 921 KRGGQVIYSGPLG 933 (1293)
Q Consensus 921 ~~~G~~~~~g~~~ 933 (1293)
.+ |++++.|..+
T Consensus 561 ~~-G~IvE~G~h~ 572 (1228)
T KOG0055|consen 561 EE-GKIVEQGTHD 572 (1228)
T ss_pred EC-CEEEEecCHH
Confidence 85 9999999975
No 277
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-35 Score=336.77 Aligned_cols=191 Identities=26% Similarity=0.388 Sum_probs=164.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-cceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-QKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++..... ++.++||+|++.+++.+||+||+.|+.+.++...
T Consensus 34 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~ 110 (351)
T PRK11432 34 MVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPK 110 (351)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCH
Confidence 47999999999999999999999988 9999999998865433 4679999999999999999999999875432100
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
. +.++.++++++.+||.+..|+.+. .|||||||||+|||||
T Consensus 111 --------------------~--------------~~~~~v~~~l~~~gl~~~~~r~~~-----~LSgGq~QRVaLARaL 151 (351)
T PRK11432 111 --------------------E--------------ERKQRVKEALELVDLAGFEDRYVD-----QISGGQQQRVALARAL 151 (351)
T ss_pred --------------------H--------------HHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHH
Confidence 0 012245678999999887776664 5999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||++||+.++..+.+.|+++.++.++|+|+++ |+..++..++|||++|++|+++..|+++++.
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vT-Hd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVT-HDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999877789999874 5567899999999999999999999998874
No 278
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.7e-34 Score=325.43 Aligned_cols=203 Identities=26% Similarity=0.386 Sum_probs=169.0
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh------hcccceEEEEccCC--CC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ------ETFARISGYCEQND--IH 791 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~--~~ 791 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++ .+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 102 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAV 102 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhcc
Confidence 569999999999999999999999999999999999765 358999999987532 12356799999997 46
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 792 SPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 792 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
.+..|+.|++.+..... ......+...+++++++.+|+. +..++.++ .||||||||++||+||+.+|++|+|
T Consensus 103 ~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-----~LS~Ge~qrl~laral~~~p~lllL 175 (268)
T PRK10419 103 NPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRPP-----QLSGGQLQRVCLARALAVEPKLLIL 175 (268)
T ss_pred CCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCCc-----cCChHHHHHHHHHHHHhcCCCEEEE
Confidence 67899999987643211 1123334445688999999996 46666543 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.+
T Consensus 176 DEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 237 (268)
T PRK10419 176 DEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-GQIVETQPVG 237 (268)
T ss_pred eCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-CEEeeeCChh
Confidence 9999999999999999999998765 899999999975 56678999999974 8999998864
No 279
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-35 Score=302.01 Aligned_cols=189 Identities=27% Similarity=0.311 Sum_probs=160.7
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeecccc--ccCCCCCHHHHHHHHhhcc
Q 000773 2 TLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQND--VHVGEMTVKETLDFSARCL 75 (1293)
Q Consensus 2 ~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~--~~~~~lTV~e~l~f~~~~~ 75 (1293)
.+|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+.+|+|+| .+-|..||++.|.-+....
T Consensus 36 lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~ 112 (252)
T COG1124 36 LGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPH 112 (252)
T ss_pred EEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhccC
Confidence 6899999999999999999999998 999999998765532 456789999997 4788899999997665432
Q ss_pred CCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCcc-ccCcccCCCcccccccccchhhH
Q 000773 76 GVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDI-CKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
+..+ .++.+.++|+.+||++ .++ +++.+||||||||++
T Consensus 113 ~~~~------------------------------------~~~~i~~~L~~VgL~~~~l~-----R~P~eLSGGQ~QRia 151 (252)
T COG1124 113 GLSK------------------------------------SQQRIAELLDQVGLPPSFLD-----RRPHELSGGQRQRIA 151 (252)
T ss_pred CccH------------------------------------HHHHHHHHHHHcCCCHHHHh-----cCchhcChhHHHHHH
Confidence 2100 0112566899999975 443 455679999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||||+.+|++|++|||||+||+..+..|++.|.++.++++.|+|++ +|+...+.++||||+||++|++++.++.+++.
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~I-sHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFI-SHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEE-eCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 99999999999999999999999999999999999999999999995 67788999999999999999999999999986
Q ss_pred H
Q 000773 235 E 235 (1293)
Q Consensus 235 ~ 235 (1293)
+
T Consensus 231 ~ 231 (252)
T COG1124 231 S 231 (252)
T ss_pred c
Confidence 4
No 280
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.2e-34 Score=318.67 Aligned_cols=209 Identities=21% Similarity=0.342 Sum_probs=167.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++.. +++.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 8 i~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 72 (225)
T PRK10247 8 LQLQNVGYLA-------------GDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDIS 72 (225)
T ss_pred EEEeccEEee-------------CCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEcC
Confidence 5677776543 34569999999999999999999999999999999999765 35799999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000773 775 Q---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgG 850 (1293)
. ..+++.++|++|++.+++ .|++||+.+....+. . ... .++++++++.+++. ...++.++ .||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~-~~~--~~~~~~~l~~~~l~~~~~~~~~~-----~LS~G 141 (225)
T PRK10247 73 TLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRN--Q-QPD--PAIFLDDLERFALPDTILTKNIA-----ELSGG 141 (225)
T ss_pred cCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcC--C-ChH--HHHHHHHHHHcCCChHHhcCCcc-----cCCHH
Confidence 2 224567899999998887 499999987543321 1 111 23467899999995 45565544 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++ |.|||++||+++ .+ +.+|++++|.+.+..+.+
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~~ 219 (225)
T PRK10247 142 EKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQE 219 (225)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHhh
Confidence 999999999999999999999999999999999999999998764 899999999975 34 579999999644444444
Q ss_pred CC
Q 000773 930 GP 931 (1293)
Q Consensus 930 g~ 931 (1293)
|.
T Consensus 220 ~~ 221 (225)
T PRK10247 220 AR 221 (225)
T ss_pred hh
Confidence 43
No 281
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.1e-34 Score=333.80 Aligned_cols=191 Identities=23% Similarity=0.304 Sum_probs=162.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|+.+|+ +|+|.++|.++.... .++.++|++|+..+++.+||+||+.++...
T Consensus 33 i~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~ 109 (343)
T TIGR02314 33 IYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLEL 109 (343)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHH
Confidence 47999999999999999999999988 999999999876532 245799999999999999999999987543
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. .. +.++.+.++++.+||.+..|..++ .|||||||||+
T Consensus 110 ~~~~--------------------~~--------------~~~~~v~e~l~~vgL~~~~~~~~~-----~LSgGqkQRV~ 150 (343)
T TIGR02314 110 DNTP--------------------KD--------------EIKRKVTELLALVGLGDKHDSYPS-----NLSGGQKQRVA 150 (343)
T ss_pred cCCC--------------------HH--------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHH
Confidence 2110 00 012235678999999988877665 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||||+.+|++++|||||||||+.++..+++.|+++.++.|.|+|+++ |..+.+.+.||++++|++|++++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliT-H~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLIT-HEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999999876689999975 5567888999999999999999999998874
No 282
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=321.60 Aligned_cols=214 Identities=23% Similarity=0.283 Sum_probs=169.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--CC-ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~~-~~~G~i~~~g~ 771 (1293)
+.++|++... +++.+|+|+||++++||+++|+||||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 72 (252)
T PRK14255 6 ITSSDVHLFY-------------GKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQ 72 (252)
T ss_pred EEEEeEEEEE-------------CCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCE
Confidence 5667776543 34569999999999999999999999999999999999643 21 24799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000773 772 PKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~ 842 (1293)
+... ...++.++|++|++.+++ .|++||+.+....+.. ...+...+.+.+.++.+++. +..++.
T Consensus 73 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~---- 145 (252)
T PRK14255 73 NIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES---- 145 (252)
T ss_pred EcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC----
Confidence 7531 234567999999998888 6999999876433211 11222223456778888764 223333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||++||+++ .+.+.+|++++|.+
T Consensus 146 -~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~ 222 (252)
T PRK14255 146 -ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT 222 (252)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 347999999999999999999999999999999999999999999999865 589999999975 56778999999975
Q ss_pred CcEEEEeCCC
Q 000773 923 GGQVIYSGPL 932 (1293)
Q Consensus 923 ~G~~~~~g~~ 932 (1293)
|+++..|++
T Consensus 223 -G~i~~~~~~ 231 (252)
T PRK14255 223 -GNLIEFADT 231 (252)
T ss_pred -CEEEEeCCH
Confidence 899988875
No 283
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-35 Score=314.20 Aligned_cols=191 Identities=26% Similarity=0.399 Sum_probs=165.2
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccC----CccccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 2 TLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLN----EFVPQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 2 ~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~----~~~~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
++|+||||||||||+++|+|+++|. +|+|.++|.++. ....++.+|||+|+|. .+..-||.|.+.|+.+..+
T Consensus 33 ~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g 109 (235)
T COG1122 33 VLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLG 109 (235)
T ss_pred EEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcC
Confidence 7899999999999999999999998 899999998865 2345678999999973 4556699999999987654
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
... .+.+++++.+++.+||.+.+++.+- .|||||||||+||
T Consensus 110 ~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~p~-----~LSGGqkqRvaIA 150 (235)
T COG1122 110 LPR----------------------------------EEIEERVAEALELVGLEELLDRPPF-----NLSGGQKQRVAIA 150 (235)
T ss_pred CCH----------------------------------HHHHHHHHHHHHHcCchhhccCCcc-----ccCCcceeeHHhh
Confidence 311 0124467889999999998887664 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
.+|+.+|++++|||||||||+..+.++++.++++.++.++|+|++ +|+.+.+..++||+++|++|+++++|++.++.+
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~-tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIV-THDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEE-eCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 999999999999999999999999999999999988778899986 567889999999999999999999999887754
No 284
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=320.41 Aligned_cols=207 Identities=24% Similarity=0.298 Sum_probs=166.9
Q ss_pred cccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC--Cc--eeEEEEEcCccCCh---hcccceEEEEccC
Q 000773 716 AEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG--GY--IEGDIRISGFPKKQ---ETFARISGYCEQN 788 (1293)
Q Consensus 716 ~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~--~~--~~G~i~~~g~~~~~---~~~~~~~~~v~q~ 788 (1293)
+++++.+|+|+||++++||+++|+||||||||||+++|+|...+ |. +.|++.++|.+... ...++.++|++|+
T Consensus 19 ~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~ 98 (257)
T PRK14246 19 YINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQ 98 (257)
T ss_pred ecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEEEccC
Confidence 34567799999999999999999999999999999999997543 21 23566666665421 2345679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLPGVTGLSIEQRKRLTIAVELVAN 864 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~ 864 (1293)
+.+++.+|++||+.+...... ....++...+++++++.+++.+ ..++. +..||||||||++|||||+.+
T Consensus 99 ~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~LS~G~~qrl~laral~~~ 171 (257)
T PRK14246 99 PNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP-----ASQLSGGQQQRLTIARALALK 171 (257)
T ss_pred CccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----cccCCHHHHHHHHHHHHHHcC
Confidence 999999999999988643221 1123344456788999999863 33433 347999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 865 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 865 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ .+.+.+|++++|.+ |+++..|+.
T Consensus 172 P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~-g~i~~~g~~ 236 (257)
T PRK14246 172 PKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN-GELVEWGSS 236 (257)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999999864 699999999975 46688999999985 899998875
No 285
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.2e-34 Score=321.68 Aligned_cols=220 Identities=22% Similarity=0.287 Sum_probs=172.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++++++.. +++.+|+|||+++++||++||+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 8 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~ 74 (252)
T CHL00131 8 LEIKNLHASV-------------NENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESIL 74 (252)
T ss_pred EEEEeEEEEe-------------CCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcc
Confidence 6677776543 334699999999999999999999999999999999996211145799999998754
Q ss_pred hh---cccc-eEEEEccCCCCCCCCCHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000773 775 QE---TFAR-ISGYCEQNDIHSPQVTVKESLIYSAFLRLA----KEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVT 845 (1293)
Q Consensus 775 ~~---~~~~-~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 845 (1293)
.. ..++ .++|++|++.+++.+|+.+++.+....... ......+...++.++++.+|+. +..++.++ .
T Consensus 75 ~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 150 (252)
T CHL00131 75 DLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN----E 150 (252)
T ss_pred cCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----c
Confidence 31 2222 478999999999999999998765332110 0111222334577889999996 35555443 1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-HhHhheeecCc
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGG 924 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~v~~l~~~G 924 (1293)
+|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +|
T Consensus 151 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~-~G 228 (252)
T CHL00131 151 GFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQ-NG 228 (252)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEe-CC
Confidence 49999999999999999999999999999999999999999999999877999999999965 34444 79999997 48
Q ss_pred EEEEeCCCC
Q 000773 925 QVIYSGPLG 933 (1293)
Q Consensus 925 ~~~~~g~~~ 933 (1293)
++++.|+++
T Consensus 229 ~i~~~~~~~ 237 (252)
T CHL00131 229 KIIKTGDAE 237 (252)
T ss_pred EEEEecChh
Confidence 999998863
No 286
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=324.34 Aligned_cols=215 Identities=20% Similarity=0.208 Sum_probs=170.3
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--C-CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~-~~~~G~i~~~g 770 (1293)
-+.++|+++.. +++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWY-------------GEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEE-------------CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 36778877643 33569999999999999999999999999999999999754 1 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 841 (1293)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+.....+.++++.+++. +..++.
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234567999999998887 499999987643221 111222234456777777542 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|.
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999875 799999999975 4677899999997
Q ss_pred cCcEEEEeCCC
Q 000773 922 RGGQVIYSGPL 932 (1293)
Q Consensus 922 ~~G~~~~~g~~ 932 (1293)
+ |+++..|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 287
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2.9e-34 Score=319.99 Aligned_cols=198 Identities=25% Similarity=0.356 Sum_probs=167.9
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHH
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVTVK 798 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~ 798 (1293)
+|+|+||++++||+++|+||||||||||+++|+|..+ .+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 27999999987642 22345689999999888899999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000773 799 ESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVA-------NPSIIFMD 871 (1293)
Q Consensus 799 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~-------~p~illlD 871 (1293)
||+.+.... ....++..++++++++.+|+.+..++.++ .||||||||++||+||+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSVN-----QLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875211 11223334567899999999877776654 799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 872 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 872 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |++++.|+.+
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999975 57788999999985 8999988753
No 288
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=355.45 Aligned_cols=216 Identities=28% Similarity=0.363 Sum_probs=177.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i~ 69 (501)
T PRK11288 5 LSFDGIGKTF-------------PGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEMR 69 (501)
T ss_pred EEEeeeEEEE-------------CCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 5666666543 345699999999999999999999999999999999998653 4799999998753
Q ss_pred h----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 775 Q----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 775 ~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
. ..+++.+||++|++.+++.+||+||+.+............++..++++++++.+|+.+..++.++ +||||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 144 (501)
T PRK11288 70 FASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLK-----YLSIG 144 (501)
T ss_pred CCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchh-----hCCHH
Confidence 2 12356799999999999999999999875321111112233444567899999999877666654 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
|||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |+++..+
T Consensus 145 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~ 222 (501)
T PRK11288 145 QRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeec
Confidence 999999999999999999999999999999999999999999878999999999975 56778999999985 8888766
Q ss_pred CC
Q 000773 931 PL 932 (1293)
Q Consensus 931 ~~ 932 (1293)
+.
T Consensus 223 ~~ 224 (501)
T PRK11288 223 DD 224 (501)
T ss_pred Cc
Confidence 53
No 289
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.3e-34 Score=335.89 Aligned_cols=192 Identities=24% Similarity=0.376 Sum_probs=164.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.+.. .++.++||+|++.+||.+||+||+.|+.+.++..
T Consensus 32 ~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (353)
T TIGR03265 32 FVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMG- 107 (353)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999988 999999999876533 3467999999999999999999999986532110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.. +.+..++++++.+||++..|+.+. .|||||||||+|||||
T Consensus 108 -------------------~~--------------~~~~~~~~~l~~l~L~~~~~~~~~-----~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 108 -------------------RA--------------EVAERVAELLDLVGLPGSERKYPG-----QLSGGQQQRVALARAL 149 (353)
T ss_pred -------------------HH--------------HHHHHHHHHHHHcCCCchhhCChh-----hCCHHHHHHHHHHHHH
Confidence 00 012246778999999988887665 5999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
+.+|++++|||||++||+.++..+.+.|+++.++.+.|+|+++| ...++..++||+++|++|++++.|+++++.+
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTH-d~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~ 224 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTH-DQEEALSMADRIVVMNHGVIEQVGTPQEIYR 224 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcC-CHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999998777899999755 5578999999999999999999999988753
No 290
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.4e-34 Score=334.39 Aligned_cols=192 Identities=22% Similarity=0.327 Sum_probs=164.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-------cceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-------QKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.+++.+||+||+.|+.+
T Consensus 21 i~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eNi~~~~~ 97 (363)
T TIGR01186 21 IFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQNTSLGPE 97 (363)
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999988 9999999998865432 4679999999999999999999999865
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
..+... . +..+.+.++++.+||++..++.++ .|||||||||
T Consensus 98 ~~~~~~--------------------~--------------~~~~~~~~~l~~vgL~~~~~~~p~-----~LSGGq~QRV 138 (363)
T TIGR01186 98 LLGWPE--------------------Q--------------ERKEKALELLKLVGLEEYEHRYPD-----ELSGGMQQRV 138 (363)
T ss_pred HcCCCH--------------------H--------------HHHHHHHHHHHhcCCchhhhCChh-----hCCHHHHHHH
Confidence 432100 0 012235678999999887777665 4999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|+++ |..+++.+++|||++|++|+++..|+++++
T Consensus 139 ~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vT-Hd~~ea~~~~drI~vl~~G~iv~~g~~~ei 217 (363)
T TIGR01186 139 GLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFIT-HDLDEAIRIGDRIVIMKAGEIVQVGTPDEI 217 (363)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999999999999999999999999999999776689999974 556788999999999999999999999887
Q ss_pred HH
Q 000773 234 LE 235 (1293)
Q Consensus 234 ~~ 235 (1293)
..
T Consensus 218 ~~ 219 (363)
T TIGR01186 218 LR 219 (363)
T ss_pred Hh
Confidence 53
No 291
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.3e-34 Score=321.70 Aligned_cols=196 Identities=24% Similarity=0.418 Sum_probs=154.6
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 5699999999999999999999999999999999998753 47999999987532 234567999999988765 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKI-----IFVEEVMDLV--ELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
|.||+.+... ....+... ....+.++.+ ++....+.. +.+|||||||||+|||||+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976321 11111110 0112233333 333333333 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||+|||+.++..+.+.|+++++ |+|||++||+++ ++ ..+|++++|.+ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEEcCH
Confidence 9999999999999999999999864 899999999975 34 56999999985 899998875
No 292
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-34 Score=312.91 Aligned_cols=187 Identities=28% Similarity=0.379 Sum_probs=155.8
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lT 796 (1293)
++++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+......++.++|++|++.+++.+|
T Consensus 12 ~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~t 89 (207)
T PRK13539 12 RGGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALT 89 (207)
T ss_pred ECCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCc
Confidence 344569999999999999999999999999999999999865 357999999987532224567899999998889999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
|+||+.+...... ... +.++++++.+|+.+..++.++ .||||||||++||+||+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~---~~~----~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~ 157 (207)
T PRK13539 90 VAENLEFWAAFLG---GEE----LDIAAALEAVGLAPLAHLPFG-----YLSAGQKRRVALARLLVSNRPIWILDEPTAA 157 (207)
T ss_pred HHHHHHHHHHhcC---CcH----HHHHHHHHHcCCHHHHcCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999987543221 111 236889999999876666554 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhee
Q 000773 877 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 920 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 920 (1293)
||+.++..+.+.|++++++|+|||++||+++ ++. . |+++.+
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~ 198 (207)
T PRK13539 158 LDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDL 198 (207)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEee
Confidence 9999999999999998877999999999975 333 3 766655
No 293
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=323.90 Aligned_cols=214 Identities=20% Similarity=0.233 Sum_probs=171.1
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g 770 (1293)
-+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~-------------~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFY-------------GGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEe-------------CCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 46777777643 3456999999999999999999999999999999999975321 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIVGL 841 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 841 (1293)
.+... ..+++.++|++|++.+++. ||.||+.+....+. ... +..+.+++.++.+++. +..++.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~--- 158 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YKG-NLDELVEDSLRRAAIWEEVKDKLKEK--- 158 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---chH-HHHHHHHHHHHHcccchhhHHHhcCC---
Confidence 87531 2345679999999988875 99999987643221 111 1223456778888774 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 842 PGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 842 ~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|.
T Consensus 159 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 234 (274)
T PRK14265 159 --GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFN 234 (274)
T ss_pred --cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEe
Confidence 347999999999999999999999999999999999999999999999865 799999999975 5778899999997
Q ss_pred --------cCcEEEEeCCC
Q 000773 922 --------RGGQVIYSGPL 932 (1293)
Q Consensus 922 --------~~G~~~~~g~~ 932 (1293)
++|++++.|++
T Consensus 235 ~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 235 TEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccccCceEEEeCCH
Confidence 25899999986
No 294
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-35 Score=304.68 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=170.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcccc----ceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQ----KTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~----~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+|+|+|.++|+ +|+|.++|++++....+ .-++--+|...+|++|||.||+..++..+.
T Consensus 32 i~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~ 108 (250)
T COG0411 32 IVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARL 108 (250)
T ss_pred EEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhh
Confidence 57999999999999999999999998 99999999999876543 335678999999999999999998865432
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. +...... +.. ..+..+..+.+..+|+.+||.+.+|+..|+ ||+|||||+.||
T Consensus 109 ~---~~~~l~~----------~~~---------~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~-----LsyG~qR~LEIA 161 (250)
T COG0411 109 G---LSGLLGR----------PRA---------RKEEREARERARELLEFVGLGELADRPAGN-----LSYGQQRRLEIA 161 (250)
T ss_pred h---hhhhhcc----------ccc---------hhhHHHHHHHHHHHHHHcCCchhhcchhhc-----CChhHhHHHHHH
Confidence 1 0000000 000 000112234567899999999999999987 999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|||+.+|++|+||||.+||.+....++.+.|+++.++.|.|++++ .|+++.+..+||||+||+.|+++.+|+++++.+
T Consensus 162 rALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillI-EHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 162 RALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLI-EHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEE-EeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999999999999999999988777888884 788999999999999999999999999999864
No 295
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=303.96 Aligned_cols=159 Identities=30% Similarity=0.478 Sum_probs=142.0
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCCC
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lT 796 (1293)
++.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (173)
T cd03230 12 KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLT 89 (173)
T ss_pred CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcccchHhhhccEEEEecCCccccCCc
Confidence 34699999999999999999999999999999999998653 47999999987543 234567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
+.||+. ||||||||++|||||+.+|++++|||||+|
T Consensus 90 v~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~ 125 (173)
T cd03230 90 VRENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSG 125 (173)
T ss_pred HHHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccC
Confidence 999862 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 877 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
||+.++..+.+.|++++++|.|+|++||+++ ++.+.+|++++|.+ |+
T Consensus 126 LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~-g~ 172 (173)
T cd03230 126 LDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNN-GR 172 (173)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeC-CC
Confidence 9999999999999999877899999999975 56668999999985 54
No 296
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.9e-34 Score=320.99 Aligned_cols=204 Identities=25% Similarity=0.321 Sum_probs=164.1
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCcc-----CCh---h----cccceEEEE
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP-----KKQ---E----TFARISGYC 785 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~-----~~~---~----~~~~~~~~v 785 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+ ... . ..++.++|+
T Consensus 14 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 91 (253)
T TIGR02323 14 GGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSGAELELYQLSEAERRRLMRTEWGFV 91 (253)
T ss_pred CCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccccccccccCCHHHHHHhhhcceEEE
Confidence 345689999999999999999999999999999999998763 47999999876 321 1 123468999
Q ss_pred ccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000773 786 EQNDI--HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELV 862 (1293)
Q Consensus 786 ~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~ 862 (1293)
+|++. +.+.+|+.||+.+..... .. ....+....++++++.+|+. +..++.+. .|||||||||+|||||+
T Consensus 92 ~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~LSgG~~qrv~laral~ 164 (253)
T TIGR02323 92 HQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDLPR-----AFSGGMQQRLQIARNLV 164 (253)
T ss_pred EeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcCch-----hcCHHHHHHHHHHHHHh
Confidence 99974 456789999986542211 11 11112335678899999996 35565543 79999999999999999
Q ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 863 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 863 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+...+|++++|.+ |++++.|+.
T Consensus 165 ~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 165 TRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVMQQ-GRVVESGLT 233 (253)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999999998764 899999999975 56668999999985 899998874
No 297
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=322.40 Aligned_cols=213 Identities=20% Similarity=0.242 Sum_probs=169.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC--C-ceeEEEEEcCc
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIRISGF 771 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~--~-~~~G~i~~~g~ 771 (1293)
+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ . +.+|+|.++|.
T Consensus 11 l~i~~v~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 77 (264)
T PRK14243 11 LRTENLNVYY-------------GSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGK 77 (264)
T ss_pred EEEeeeEEEE-------------CCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCE
Confidence 5677776543 335699999999999999999999999999999999996431 1 25799999998
Q ss_pred cCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000773 772 PKK-----QETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES----LKDAIVGLP 842 (1293)
Q Consensus 772 ~~~-----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 842 (1293)
++. ....++.++|++|++.+++ .|++||+.+....+. .. .+..++++++++.+++.+ ..++.
T Consensus 78 ~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~---- 148 (264)
T PRK14243 78 NLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS---- 148 (264)
T ss_pred EccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC----
Confidence 752 1234567999999998887 499999987643221 11 122234567778877743 22333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+
T Consensus 149 -~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~ 225 (264)
T PRK14243 149 -GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNV 225 (264)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEec
Confidence 347999999999999999999999999999999999999999999999875 589999999975 67888999999972
Q ss_pred --------CcEEEEeCCC
Q 000773 923 --------GGQVIYSGPL 932 (1293)
Q Consensus 923 --------~G~~~~~g~~ 932 (1293)
.|++++.|+.
T Consensus 226 ~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 226 ELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred ccccccccCceEEEeCCH
Confidence 4899998875
No 298
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2e-34 Score=329.73 Aligned_cols=191 Identities=28% Similarity=0.395 Sum_probs=163.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||||++.+++.+||+||+.|.+...+..
T Consensus 35 i~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 111 (306)
T PRK13537 35 CFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLS 111 (306)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 99999999987542 23467999999999999999999999865543210
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
. . +....++.+++.+||.+..++.+++ ||||||||++||+|
T Consensus 112 ~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~la~a 152 (306)
T PRK13537 112 A--------------------A--------------AARALVPPLLEFAKLENKADAKVGE-----LSGGMKRRLTLARA 152 (306)
T ss_pred H--------------------H--------------HHHHHHHHHHHHcCCchHhcCchhh-----CCHHHHHHHHHHHH
Confidence 0 0 0112346688999999888888865 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|+.+|++++|||||+|||+.++..+++.|+++++ .|+|||++. |..+++.++||||++|++|++++.|+++++.+
T Consensus 153 L~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~till~s-H~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 153 LVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-RGKTILLTT-HFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEC-CCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999965 589999975 55678999999999999999999999998764
No 299
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-34 Score=329.65 Aligned_cols=212 Identities=25% Similarity=0.398 Sum_probs=176.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++++.+. ...++|+|+|+++++||.+||+|+||||||||++.|+|..+ +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 5788888876643 23469999999999999999999999999999999999766 3589999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-------ccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKD-------AIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~-------~~~~~~~ 843 (1293)
.. ..+++.+++++|...+|. -|+|+||..+. .+.++++ +.++++.+||.+... +.+|+ +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~AsDEe----l~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDASDEE----LWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCCHHH----HHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 345678899999988875 49999997642 1234443 578899999987543 34554 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
.+.||||||||++|||+|++|.++++|||||.|||+.+.+++++.|.+-++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999988764 899999999864 6788999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|++++.|...
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 9999999864
No 300
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.4e-34 Score=333.98 Aligned_cols=192 Identities=22% Similarity=0.332 Sum_probs=164.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCcee--EEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVR--GEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~--G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+|||||||||||++|+|+.+|+ + |+|.++|.++.... .++.++||+|++.+++.+||+||+.|+.+..+.
T Consensus 33 ~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~ 109 (362)
T TIGR03258 33 LLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKM 109 (362)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999987 7 99999998876433 246799999999999999999999998653221
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
. .. +.+..++++++.+||++..|+.++ +|||||||||+|||
T Consensus 110 ~--------------------~~--------------~~~~~v~~~l~~~gL~~~~~~~~~-----~LSgGq~QRvaLAR 150 (362)
T TIGR03258 110 P--------------------KA--------------DIAERVADALKLVGLGDAAAHLPA-----QLSGGMQQRIAIAR 150 (362)
T ss_pred C--------------------HH--------------HHHHHHHHHHHhcCCCchhhCChh-----hCCHHHHHHHHHHH
Confidence 0 00 012245778999999988887775 49999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhC-CCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVT-DATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~-~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
||+.+|++++|||||+|||+.++.++.+.|+++.++. |+|+|+++ |+.+++..++|||++|++|+++..|+++++.+
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vT-Hd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVT-HDQDDALTLADKAGIMKDGRLAAHGEPQALYD 228 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999998764 78988874 55678999999999999999999999998743
No 301
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=315.73 Aligned_cols=194 Identities=18% Similarity=0.279 Sum_probs=164.2
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
+++.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|. +++++|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 456799999999999999999999999999999999998663 4799999984 3567777777888999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
.||+.+..... ..+.++....++++++.+++.+..++.++ .||||||||++||+||+.+|++|+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPVK-----KYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCcc-----cCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 12334444456788888899877776544 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 878 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+ |+++..|+.+
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999777999999999965 56678999999974 8999988854
No 302
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.3e-34 Score=335.12 Aligned_cols=191 Identities=25% Similarity=0.352 Sum_probs=163.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++.... .++.++||+|++.++|.+||+||+.|+.+.++..
T Consensus 42 ~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 117 (375)
T PRK09452 42 FLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTP- 117 (375)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCC-
Confidence 47999999999999999999999988 999999999876533 3467999999999999999999999986532110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.. +.++.++++++.+||++..++.+. +|||||||||+|||||
T Consensus 118 -------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~p~-----~LSgGq~QRVaLARaL 159 (375)
T PRK09452 118 -------------------AA--------------EITPRVMEALRMVQLEEFAQRKPH-----QLSGGQQQRVAIARAV 159 (375)
T ss_pred -------------------HH--------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHH
Confidence 00 012235678999999988877664 5999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||++||..++..+.+.|+++.++.++|+|+++ |+..++..++|+|++|++|+++..|+++++.
T Consensus 160 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vT-Hd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 160 VNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVT-HDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999877789999875 5567899999999999999999999998874
No 303
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.9e-34 Score=361.26 Aligned_cols=210 Identities=24% Similarity=0.426 Sum_probs=173.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++... +++.+|+|+|++++|||.+||+||||||||||+++|+|.. + .+|+|.+||.+.
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 588999975321 2356999999999999999999999999999999999987 4 379999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
++ ..+++.++||+|++.+++. |++||+.++. ++.++++ ++++++..++.+ -.|+.+|..
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~-----~~~~~ee----i~~al~~a~l~~~i~~lp~G~dT~vge~- 482 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN-----PDASDEQ----LQQALENAWVSEFLPLLPQGLDTPIGDQ- 482 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC-----CCCCHHH----HHHHHHHhCHHHHHHhcccccccccccC-
Confidence 53 4567889999999998865 9999998741 1233333 455666665543 346777754
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|+||+||||||+||+.+++.+.+.|+++. +++|+|+++|++ +..+.+|++++|++
T Consensus 483 G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl--~~i~~aD~Iivl~~- 558 (588)
T PRK11174 483 AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQL--EDLAQWDQIWVMQD- 558 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecCh--HHHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999885 589999999997 46778999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|+++..|+.+
T Consensus 559 G~i~e~G~~~ 568 (588)
T PRK11174 559 GQIVQQGDYA 568 (588)
T ss_pred CeEeecCCHH
Confidence 8999999853
No 304
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.2e-32 Score=348.23 Aligned_cols=123 Identities=25% Similarity=0.341 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCEEE
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-KDAIVGLPGVTGLSIEQRKRLTIAVELVA---NPSIIF 869 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~aL~~---~p~ill 869 (1293)
++||.|.+.|...+. .. ....++++.+||... .++.+ +.||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~~-----~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQPA-----TTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 478888887764431 11 124578899999753 45544 3799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee-----cCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-----~~G~~~~~g~~ 932 (1293)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ....+|+++.|. ++|++++.|++
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999864 457799999993 47999999986
No 305
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=327.04 Aligned_cols=221 Identities=24% Similarity=0.314 Sum_probs=170.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC---CceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~---~~~~G~i~~~g 770 (1293)
.+.++|+++.. +++.+|+++||++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~-------------~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYY-------------GDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEe-------------CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 46677776543 345699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000773 771 FPKKQ-----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAK---------EVS-KEDKIIFVEEVMDLVELESLK 835 (1293)
Q Consensus 771 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~---------~~~-~~~~~~~~~~~l~~l~l~~~~ 835 (1293)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+...+.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 123567999999998887 49999998764321100 011 122234578889999884321
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHh
Q 000773 836 DAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 915 (1293)
Q Consensus 836 ~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 915 (1293)
+.... ..+.+|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||++||+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12357999999999999999999999999999999999999999999999976 589999999975 4677899
Q ss_pred Hhh-eeecCcEEEEeCCC
Q 000773 916 ELL-LLKRGGQVIYSGPL 932 (1293)
Q Consensus 916 ~v~-~l~~~G~~~~~g~~ 932 (1293)
+++ +|. +|++++.|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 555 5899999885
No 306
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=295.93 Aligned_cols=191 Identities=24% Similarity=0.369 Sum_probs=159.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc----cceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP----QKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||+|||||||+|+|..++. +|+|.++|++++.... +.-++||||....|+.|||+|||..++....
T Consensus 31 iv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~ 107 (237)
T COG0410 31 IVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARR 107 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhccc
Confidence 58999999999999999999999986 8999999999987654 3458999999999999999999998765432
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHh-CCccccCcccCCCcccccccccchhhHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKIL-GLDICKDTIVGDEMNRGISGGQKKRVTT 155 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1293)
... . .+...+.+.+.| .|.+.++++-|+ |||||||-++|
T Consensus 108 ~~~-~----------------------------------~~~~~e~v~~lFP~Lker~~~~aG~-----LSGGEQQMLAi 147 (237)
T COG0410 108 DKE-A----------------------------------QERDLEEVYELFPRLKERRNQRAGT-----LSGGEQQMLAI 147 (237)
T ss_pred ccc-c----------------------------------ccccHHHHHHHChhHHHHhcCcccC-----CChHHHHHHHH
Confidence 100 0 000022333333 244445666665 99999999999
Q ss_pred HHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 156 GEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 156 a~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
||||+++|++|+|||||.||-|.-..+|++.|+++.++.+.||+++ .|....+.+.+||.++|.+|++++.|+.+++.+
T Consensus 148 aRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLV-EQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 148 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLV-EQNARFALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred HHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEE-eccHHHHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999988767788885 899999999999999999999999999998853
No 307
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=321.61 Aligned_cols=195 Identities=26% Similarity=0.385 Sum_probs=156.0
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
.+++|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 699999999999999999999999999999999998763 57999999976532 234567999999998876 699
Q ss_pred HHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 798 KESLIYSAFLRLAKEVSKEDKI-----IFVEEVMDLV--ELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
+||+.+... .....+.. ..+++.++.+ ++.+..+.. +..||||||||++||+||+.+|++++|
T Consensus 93 ~enl~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRP-----GATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999976421 11111111 1123444444 454444443 347999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||||+|||+.++..+.+.|+++++ |+|||++||+++ ++ ..+|++++|.+ |+++..|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 999999999999999999999864 899999999975 44 45999999985 889888774
No 308
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-35 Score=304.25 Aligned_cols=190 Identities=27% Similarity=0.433 Sum_probs=166.6
Q ss_pred ceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 000773 725 EVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 725 ~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
++++..+.-.++||-|+||||||||+|+|+|...+ .+|.|.+||....+ ...+|++|||+||..+||++||
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rP--deG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tV 93 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRP--DEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTV 93 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCc--cccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEE
Confidence 57888877579999999999999999999998774 48999999975321 1246789999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
+.||.|+.... .. ...+++.+.+|+.++.++... .|||||||||+|+|||+++|++|+||||.++|
T Consensus 94 rgNL~YG~~~~-----~~----~~fd~iv~lLGI~hLL~R~P~-----~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSL 159 (352)
T COG4148 94 RGNLRYGMWKS-----MR----AQFDQLVALLGIEHLLDRYPG-----TLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred ecchhhhhccc-----ch----HhHHHHHHHhCcHHHHhhCCC-----ccCcchhhHHHHHHHHhcCCCeeeecCchhhc
Confidence 99999975421 11 235789999999999999866 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 878 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|...+.+++-.|++++++ ...|+.+||.++ |+..++|++++|.+ |+|...|+.
T Consensus 160 D~~RK~EilpylERL~~e~~IPIlYVSHS~~-Ev~RLAd~vV~le~-GkV~A~g~~ 213 (352)
T COG4148 160 DLPRKREILPYLERLRDEINIPILYVSHSLD-EVLRLADRVVVLEN-GKVKASGPL 213 (352)
T ss_pred ccchhhHHHHHHHHHHHhcCCCEEEEecCHH-HHHhhhheEEEecC-CeEEecCcH
Confidence 999999999999999977 889999999975 79999999999985 999999996
No 309
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-34 Score=332.20 Aligned_cols=192 Identities=22% Similarity=0.310 Sum_probs=161.2
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKE 799 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e 799 (1293)
+.+|+|+||++++||++||+|||||||||||++|+|..++ .+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P--~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMP--NKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 4699999999999999999999999999999999998763 479999998641 1222345667899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000773 800 SLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDA 879 (1293)
Q Consensus 800 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~ 879 (1293)
|+.+..... ..+.++..++++++++.+++.+..++.++ .||||||||++|||||+.+|++|+|||||+|||+
T Consensus 105 nL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~~-----~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPVK-----TYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCcc-----cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 998754322 12334444557789999999887777654 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 880 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 880 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|.+ |++++.|+++
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999998877999999999975 56778999999985 8999998864
No 310
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=330.31 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=183.0
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC--ceeEEEEEcCc
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG--YIEGDIRISGF 771 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~--~~~G~i~~~g~ 771 (1293)
-++.+|++...... .+...+++||||++.+||++||+|.|||||||+.++|.|..+.+ ..+|+|.++|.
T Consensus 5 lL~V~nL~v~~~~~---------~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~ 75 (539)
T COG1123 5 LLEVENLTVEFATD---------GGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGR 75 (539)
T ss_pred eEEEeceEEEEecC---------CcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCc
Confidence 35677776554321 12347999999999999999999999999999999999976533 35799999998
Q ss_pred cCCh---h----cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000773 772 PKKQ---E----TFARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLP 842 (1293)
Q Consensus 772 ~~~~---~----~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~ 842 (1293)
+... . .+.+.++|++|++ .+.|-+|+.+.+.-....+.. .+.++..+++.++++.+||.+.... ..
T Consensus 76 dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~--~~~~ea~~~a~elL~~Vgl~~~~~~---~~ 150 (539)
T COG1123 76 DLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK--GSRAEARKRAVELLEQVGLPDPERR---DR 150 (539)
T ss_pred chhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHcCCCChhhh---cc
Confidence 6421 1 1336799999996 467789999888765554432 3367777889999999999876655 22
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheee
Q 000773 843 GVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 843 ~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
.+++|||||||||.||+||+.+|++|++||||++||+.++.+|+++|+++.++ |.++|++|||+. -+.+.+||+++|.
T Consensus 151 yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~-Vva~~aDrv~Vm~ 229 (539)
T COG1123 151 YPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLG-VVAELADRVVVMY 229 (539)
T ss_pred CCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHH-HHHHhcCeEEEEE
Confidence 34589999999999999999999999999999999999999999999999854 999999999986 3778899999998
Q ss_pred cCcEEEEeCCCC
Q 000773 922 RGGQVIYSGPLG 933 (1293)
Q Consensus 922 ~~G~~~~~g~~~ 933 (1293)
+ |++++.|+.+
T Consensus 230 ~-G~iVE~G~~~ 240 (539)
T COG1123 230 K-GEIVETGPTE 240 (539)
T ss_pred C-CEEEEecCHH
Confidence 5 9999999964
No 311
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=5.6e-34 Score=307.09 Aligned_cols=177 Identities=25% Similarity=0.339 Sum_probs=151.5
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ 794 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 87 (198)
T TIGR01189 10 RGERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPE 87 (198)
T ss_pred ECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEcccchHHhhhheEEeccCcccccC
Confidence 3456799999999999999999999999999999999998653 57999999987532 2234678999999989899
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+|+.||+.+....+. . + .+.++++++.+++.+..++.++ .||||||||++||+|++.+|++++|||||
T Consensus 88 ~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt 155 (198)
T TIGR01189 88 LSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPAA-----QLSAGQQRRLALARLWLSRAPLWILDEPT 155 (198)
T ss_pred CcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999987643321 1 1 2346789999999887777654 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000773 875 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 907 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 907 (1293)
+|||+.++..+.+.|++++++|.|||++||++.
T Consensus 156 ~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 156 TALDKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 999999999999999998777999999999874
No 312
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.9e-34 Score=315.24 Aligned_cols=195 Identities=24% Similarity=0.421 Sum_probs=159.1
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 469999999999999999999999999999999999865 347999999986532 223567999999998876 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVG------LPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~------~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
|.||+.+.. . .... ..+.++++.+++.+..+..+. ......||||||||++||+||+.+|++|+|
T Consensus 94 v~e~l~~~~--~---~~~~----~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGA--P---LADD----ERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCC--C---CCCH----HHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999987531 1 1111 235677888888776665431 112357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||||+|||+.++..+.+.|++++++ +|||++||+++ ..+.+|++++|.+ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999998764 89999999975 3478999999985 8887654
No 313
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-34 Score=318.36 Aligned_cols=208 Identities=24% Similarity=0.292 Sum_probs=165.6
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCC--C-CceeEEEEEcCccCCh-----hcccceEEEEccCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIRISGFPKKQ-----ETFARISGYCEQND 789 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~--~-~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~ 789 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 14 ~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 93 (250)
T PRK14266 14 DDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKP 93 (250)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCC
Confidence 34569999999999999999999999999999999999643 1 1257999999987532 23456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 790 IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 790 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
.+++. |+.||+.+..... .....+...+++.++++.+|+.+....... .....||||||||++|||||+.+|++|+
T Consensus 94 ~~~~~-t~~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lll 169 (250)
T PRK14266 94 NPFPK-SIFDNVAYGLRIH--GEDDEDFIEERVEESLKAAALWDEVKDKLD-KSALGLSGGQQQRLCIARTIAVSPEVIL 169 (250)
T ss_pred ccCcc-hHHHHHHhHHhhc--CCCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 88875 9999998754322 111223334567888999988542111111 1245799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++...+|++++|.+ |++++.|+.
T Consensus 170 lDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14266 170 MDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEIIESGLT 229 (250)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeEEEeCCH
Confidence 9999999999999999999999864 899999999975 57777888888875 899998875
No 314
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=7.6e-34 Score=317.92 Aligned_cols=209 Identities=26% Similarity=0.293 Sum_probs=162.8
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c-ccceEEEEccCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T-FARISGYCEQNDIHSP 793 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~~ 793 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.... . .++.++|++|++.+++
T Consensus 12 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (248)
T PRK09580 12 EDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIP 91 (248)
T ss_pred CCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhcc
Confidence 34569999999999999999999999999999999999742113579999999875321 1 2346899999999888
Q ss_pred CCCHHHHHHHHHH-hcCC-C--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000773 794 QVTVKESLIYSAF-LRLA-K--EVSKEDKIIFVEEVMDLVELE-SLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSII 868 (1293)
Q Consensus 794 ~lTv~e~l~~~~~-~~~~-~--~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~il 868 (1293)
.+|+.+++.+... ++.. . .....+...++++.++.+++. +..++.+. +.|||||||||+|||||+.+|++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrv~laral~~~p~il 167 (248)
T PRK09580 92 GVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----VGFSGGEKKRNDILQMAVLEPELC 167 (248)
T ss_pred chhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----CCCCHHHHHHHHHHHHHHcCCCEE
Confidence 8888776653211 1110 0 011222345577889999984 44444432 269999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-HhHhheeecCcEEEEeCCC
Q 000773 869 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 869 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~v~~l~~~G~~~~~g~~ 932 (1293)
+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +|++++.|+.
T Consensus 168 lLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~-~g~i~~~g~~ 230 (248)
T PRK09580 168 ILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLY-QGRIVKSGDF 230 (248)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEE-CCeEEEeCCH
Confidence 999999999999999999999999877899999999965 34444 79999987 5899999875
No 315
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-33 Score=286.77 Aligned_cols=228 Identities=25% Similarity=0.313 Sum_probs=190.9
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++.+|+.+++.. ++.||++||++|++||+.+||||||||||||.++|+|.+....++|+|.++|+++.
T Consensus 4 L~I~dLhv~v~~------------~keILkgvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI~ 71 (251)
T COG0396 4 LEIKDLHVEVEG------------KKEILKGVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDIL 71 (251)
T ss_pred eEEeeeEEEecC------------chhhhcCcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCcccc
Confidence 567777776631 25899999999999999999999999999999999998876677899999999864
Q ss_pred h----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCH
Q 000773 775 Q----ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSI 849 (1293)
Q Consensus 775 ~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSg 849 (1293)
. +..+.-+...+|.|.-+|..|+.+.|..+...+........+....+++.++.+++.. ..++.+.. ++||
T Consensus 72 ~l~~~ERAr~GifLafQ~P~ei~GV~~~~fLr~a~n~~~~~~~~~~~~~~~~~e~~~~l~~~~~~l~R~vN~----GFSG 147 (251)
T COG0396 72 ELSPDERARAGIFLAFQYPVEIPGVTNSDFLRAAMNARRGARGILPEFIKELKEKAELLGLDEEFLERYVNE----GFSG 147 (251)
T ss_pred cCCHhHHHhcCCEEeecCCccCCCeeHHHHHHHHHHhhhccccccHHHHHHHHHHHHHcCCCHHHhhcccCC----CcCc
Confidence 3 2334557889999999999999999987765433221112344556889999999987 67777663 8999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHH--hHhheeecCcEEE
Q 000773 850 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF--DELLLLKRGGQVI 927 (1293)
Q Consensus 850 Gerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~--d~v~~l~~~G~~~ 927 (1293)
|||||..|+..++.+|++.+||||-||||..+-+.|-+.+.++++.|.+++++||.. .+.++. |++.+|.+ |+|+
T Consensus 148 GEkKR~EilQ~~~lePkl~ILDE~DSGLDIdalk~V~~~i~~lr~~~~~~liITHy~--rll~~i~pD~vhvl~~-GrIv 224 (251)
T COG0396 148 GEKKRNEILQLLLLEPKLAILDEPDSGLDIDALKIVAEGINALREEGRGVLIITHYQ--RLLDYIKPDKVHVLYD-GRIV 224 (251)
T ss_pred chHHHHHHHHHHhcCCCEEEecCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEecHH--HHHhhcCCCEEEEEEC-CEEE
Confidence 999999999999999999999999999999999999999999999999999999974 577777 99999985 9999
Q ss_pred EeCCCCCChhHHHHHHHhC
Q 000773 928 YSGPLGRNSHKVIEYYEAI 946 (1293)
Q Consensus 928 ~~g~~~~~~~~~~~~~~~~ 946 (1293)
..|.+ ++.+.++..
T Consensus 225 ~sG~~-----el~~~le~~ 238 (251)
T COG0396 225 KSGDP-----ELAEELEEK 238 (251)
T ss_pred ecCCH-----HHHHHHHHh
Confidence 99985 567777765
No 316
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.3e-34 Score=307.03 Aligned_cols=184 Identities=24% Similarity=0.337 Sum_probs=155.1
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQV 795 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~l 795 (1293)
+++++|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|+..+++.+
T Consensus 12 ~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 89 (200)
T PRK13540 12 HDQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNP--EKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYL 89 (200)
T ss_pred CCeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeeEEECCCccccCHHHHHhheEEeccccccCcCC
Confidence 345699999999999999999999999999999999998763 57999999987642 23456799999999888999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
||+||+.+.... . .. ...++++++.+++.+..++.++ .||||||||++|||||+.+|++|+|||||+
T Consensus 90 tv~~~~~~~~~~--~----~~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rv~laral~~~p~~lilDEP~~ 156 (200)
T PRK13540 90 TLRENCLYDIHF--S----PG--AVGITELCRLFSLEHLIDYPCG-----LLSSGQKRQVALLRLWMSKAKLWLLDEPLV 156 (200)
T ss_pred CHHHHHHHHHhc--C----cc--hHHHHHHHHHcCCchhhhCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 999999875321 1 11 1246889999999876666554 699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhh
Q 000773 876 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 918 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~ 918 (1293)
|||+.++..+.+.|++++++|+|||++||++. ....+|..+
T Consensus 157 ~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 157 ALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred ccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 99999999999999998777999999999964 445566543
No 317
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-34 Score=307.38 Aligned_cols=192 Identities=25% Similarity=0.350 Sum_probs=170.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-------cceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-------QKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+.+|||-||||||||+++|.++++|+ +|+|.++|.++..... ++.+++|+|+..++|..||.||..|+.+
T Consensus 56 IfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe 132 (386)
T COG4175 56 IFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 132 (386)
T ss_pred EEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee
Confidence 47899999999999999999999998 9999999998765432 3578999999999999999999999998
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
.++.+.. +.+++..+.|+..||+...+.... +||||+||||
T Consensus 133 v~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp~-----eLSGGMqQRV 173 (386)
T COG4175 133 VQGVPKA----------------------------------EREERALEALELVGLEGYADKYPN-----ELSGGMQQRV 173 (386)
T ss_pred ecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCcc-----cccchHHHHH
Confidence 8765321 112345678999999988877664 5999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
.|||||+.+|+|+++|||+|+|||--+.++.+.|.++.++.++||+.+ +|+.+|++++.|||.+|++|+|+..|+++|+
T Consensus 174 GLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFi-tHDLdEAlriG~rIaimkdG~ivQ~Gtp~eI 252 (386)
T COG4175 174 GLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFI-THDLDEALRIGDRIAIMKDGEIVQVGTPEEI 252 (386)
T ss_pred HHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEE-ecCHHHHHhccceEEEecCCeEEEeCCHHHH
Confidence 999999999999999999999999999999999999988889999995 6788999999999999999999999999999
Q ss_pred HH
Q 000773 234 LE 235 (1293)
Q Consensus 234 ~~ 235 (1293)
..
T Consensus 253 l~ 254 (386)
T COG4175 253 LL 254 (386)
T ss_pred Hc
Confidence 74
No 318
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=9.1e-34 Score=312.03 Aligned_cols=191 Identities=25% Similarity=0.305 Sum_probs=155.8
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEc--Cc--cCCh---hc----ccceEEEEccC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRIS--GF--PKKQ---ET----FARISGYCEQN 788 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~--g~--~~~~---~~----~~~~~~~v~q~ 788 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++ |. +... .. .++.++|++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 4699999999999999999999999999999999998663 47999998 42 3211 11 23468999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+.+++.+||+|++.+..... ....++..+++.++++.+|+.+ ..+..+ .+||||||||++||+||+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLPP-----ATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCCc-----ccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999998754322 1223333456788999999975 335443 47999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheee
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 921 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 921 (1293)
++|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|+++.+.
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 9999999999999999999999999877999999999953 3556789887763
No 319
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=303.13 Aligned_cols=160 Identities=30% Similarity=0.426 Sum_probs=142.1
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-----hcccceEEEEccCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-----ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~~~ 792 (1293)
+++.+++++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.++
T Consensus 11 ~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (178)
T cd03229 11 GQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALF 88 (178)
T ss_pred CCeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccC
Confidence 34569999999999999999999999999999999999866 357999999987532 23456799999999998
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDE 872 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDE 872 (1293)
+.+|++||+.+. ||||||||++||+||+.+|++++|||
T Consensus 89 ~~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDE 126 (178)
T cd03229 89 PHLTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDE 126 (178)
T ss_pred CCCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 899999987531 89999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 873 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 873 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
||+|||+.++..+.+.|++++++ |+|+|+++|+++ ++.+.+|++++|++
T Consensus 127 P~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~ 176 (178)
T cd03229 127 PTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRD 176 (178)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC
Confidence 99999999999999999999877 899999999975 46668999999975
No 320
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.3e-34 Score=282.51 Aligned_cols=185 Identities=24% Similarity=0.381 Sum_probs=158.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
++-|+||||||||||||+|.+..+|+ +|+|.+||.+++... .++++|+|+||..+++..||.||+.|..+.
T Consensus 30 f~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v 106 (223)
T COG2884 30 FVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRV 106 (223)
T ss_pred EEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeeccccccchHhhhhhhhhhc
Confidence 46789999999999999999999998 999999999986543 357899999999999999999999999877
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+... .+.++.+.++|+..||.+..+... .+|||||||||+
T Consensus 107 ~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~lP-----~~LSGGEQQRva 147 (223)
T COG2884 107 IGKPP----------------------------------REIRRRVSEVLDLVGLKHKARALP-----SQLSGGEQQRVA 147 (223)
T ss_pred cCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcCc-----cccCchHHHHHH
Confidence 65321 112445778899999998776544 569999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcC
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGP 229 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~ 229 (1293)
||||++.+|++|+.||||..||+..+.++++++.++.+ .|+||++++ |+..-+..+-.|++.|++|+++....
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~GtTVl~AT-Hd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-LGTTVLMAT-HDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-cCcEEEEEe-ccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999999999976 699999975 55666666778999999999986543
No 321
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=318.35 Aligned_cols=215 Identities=22% Similarity=0.248 Sum_probs=171.1
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCC--C-ceeEEEEEcC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIRISG 770 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~--~-~~~G~i~~~g 770 (1293)
.+.++|+++.. +++.+|+|+||++++||+++|+||||||||||+++|+|...+ + +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~-------------~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYY-------------GGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEE-------------CCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 46778877644 335699999999999999999999999999999999997653 1 2589999998
Q ss_pred ccCC-------hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccc
Q 000773 771 FPKK-------QETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELE----SLKDAIV 839 (1293)
Q Consensus 771 ~~~~-------~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~ 839 (1293)
.+.. ...+++.++|++|++.+++. |++||+.+...... ....+...+.++++++.+++. +..++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~- 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG--VKRRSILEERVENALRNAALWDEVKDRLGDL- 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC--CChHHHHHHHHHHHHHHcCCchhhhHHHhCC-
Confidence 7642 12345679999999998886 99999987643221 111122234567788888774 223333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhe
Q 000773 840 GLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 919 (1293)
Q Consensus 840 ~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~ 919 (1293)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++
T Consensus 159 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~ 232 (265)
T PRK14252 159 ----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAY 232 (265)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEE
Confidence 347999999999999999999999999999999999999999999999875 699999999975 56678999999
Q ss_pred eecCcEEEEeCCC
Q 000773 920 LKRGGQVIYSGPL 932 (1293)
Q Consensus 920 l~~~G~~~~~g~~ 932 (1293)
|.+ |+++..|+.
T Consensus 233 l~~-G~i~~~g~~ 244 (265)
T PRK14252 233 MYM-GELIEFGAT 244 (265)
T ss_pred EEC-CEEEEeCCH
Confidence 975 899998875
No 322
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.4e-34 Score=319.72 Aligned_cols=196 Identities=29% Similarity=0.434 Sum_probs=153.8
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999865 357999999977532 223456999999988876 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAI-------VGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-------~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
|+||+.+.... ...++ .++.++..++.+..+.. .. ..+..|||||||||+||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPD-----ATDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCC-----CCHHH----HHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999764211 11111 12233333332221111 11 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||+|||+.++..+.+.|++++ +|+|||++||+++ ++ +.+|++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7899999999975 34 57999999985 899988874
No 323
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=319.79 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=198.1
Q ss_pred cccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEcc
Q 000773 712 EQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQ 787 (1293)
Q Consensus 712 ~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q 787 (1293)
+..+.+++..+++|||+++++||+.||+|.||||||||+++|.|...| .+|+|.++|++..- ...+..||+|.|
T Consensus 9 ~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P--~~GeI~v~G~~v~~~sP~dA~~~GIGMVhQ 86 (501)
T COG3845 9 GITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQP--DSGEIRVDGKEVRIKSPRDAIRLGIGMVHQ 86 (501)
T ss_pred ccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccC--CcceEEECCEEeccCCHHHHHHcCCcEEee
Confidence 344556778899999999999999999999999999999999998774 58999999987532 334567999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 788 NDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 788 ~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+..+.|++||.||+..+.........+.++..++++++.+..|+.--.|.+++ .||-||||||.|-++|.++|++
T Consensus 87 HF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~-----dLsVG~qQRVEIlKaLyr~a~i 161 (501)
T COG3845 87 HFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVA-----DLSVGEQQRVEILKALYRGARL 161 (501)
T ss_pred ccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceee-----cCCcchhHHHHHHHHHhcCCCE
Confidence 99999999999999887543222234556667789999999999888888877 5999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCC-CCC-ChhHHHHHHHh
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGP-LGR-NSHKVIEYYEA 945 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~-~~~-~~~~~~~~~~~ 945 (1293)
|+|||||+-|-|...+++++++++++++|+|||++||..+ |+.+.+||+.+|.+ |+++-.-+ ..+ ..+++.+..-.
T Consensus 162 LILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~-Ev~~iaDrvTVLR~-Gkvvgt~~~~~~~t~~ela~lMvG 239 (501)
T COG3845 162 LILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLK-EVMAIADRVTVLRR-GKVVGTVDPVAETTEEELAELMVG 239 (501)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhhCeeEEEeC-CeEEeeecCCCCCCHHHHHHHhcC
Confidence 9999999999999999999999999999999999999986 79999999999975 88876555 322 33344443321
Q ss_pred -CCCCCCCCCCCCcccchhhccc
Q 000773 946 -IPGVPKIKEKYNPATWMLEVSS 967 (1293)
Q Consensus 946 -~~~~~~~~~~~n~a~~~~~~~~ 967 (1293)
....+.......|.+.++++.+
T Consensus 240 ~~v~~~~~~~~~~pg~~vL~V~~ 262 (501)
T COG3845 240 REVVLRVVKPPSTPGEVVLEVED 262 (501)
T ss_pred CccccccccCCCCCCCeEEEEee
Confidence 1011111234556677776643
No 324
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-33 Score=317.22 Aligned_cols=210 Identities=20% Similarity=0.307 Sum_probs=171.0
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
+.++|+++.... +...+|+|+|++|++||+++|+||||||||||+++|+|... .+|+|.++|.++.
T Consensus 3 i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~ 68 (275)
T cd03289 3 MTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWN 68 (275)
T ss_pred EEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhh
Confidence 577888765521 23459999999999999999999999999999999999865 3699999998764
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCCC
Q 000773 775 Q---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGL------PGVT 845 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~------~~~~ 845 (1293)
. ..+++.++|++|++.+++. |++||+.... .... +.+.+.++.+||.+..+..++. ++..
T Consensus 69 ~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~~----~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~ 137 (275)
T cd03289 69 SVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWSD----EEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGC 137 (275)
T ss_pred hCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCCH----HHHHHHHHHcCCHHHHHhCcccccceecCCCC
Confidence 2 2356679999999999875 9999996321 1122 2356788889998766655431 1234
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
.||||||||++|||||+.+|+||+|||||++||+.+...+.+.|+++. +++|||+++|+++ ....+|++++|.+ |+
T Consensus 138 ~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G~ 213 (275)
T cd03289 138 VLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-NK 213 (275)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-Ce
Confidence 699999999999999999999999999999999999999999999875 4899999999974 4456999999975 89
Q ss_pred EEEeCCCC
Q 000773 926 VIYSGPLG 933 (1293)
Q Consensus 926 ~~~~g~~~ 933 (1293)
+++.|+++
T Consensus 214 i~~~g~~~ 221 (275)
T cd03289 214 VRQYDSIQ 221 (275)
T ss_pred EeecCCHH
Confidence 99999864
No 325
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.4e-34 Score=326.84 Aligned_cols=192 Identities=26% Similarity=0.385 Sum_probs=162.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.++..+..
T Consensus 21 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 97 (302)
T TIGR01188 21 VFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLYGLP 97 (302)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 99999999877532 12456899999999999999999999865533210
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
. . +.+..++++++.+||++..++.+++ |||||||||+||+|
T Consensus 98 ~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~la~a 138 (302)
T TIGR01188 98 K--------------------D--------------EAEERAEELLELFELGEAADRPVGT-----YSGGMRRRLDIAAS 138 (302)
T ss_pred H--------------------H--------------HHHHHHHHHHHHcCChhHhCCchhh-----CCHHHHHHHHHHHH
Confidence 0 0 0112356789999999888887765 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEF 236 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~ 236 (1293)
|+.+|++++|||||+|||+.++..+++.|+++++ .|+|+|++. |..+++.+.||++++|++|++++.|+++++.+.
T Consensus 139 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvi~~s-H~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 139 LIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-EGVTILLTT-HYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEC-CCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 9999999999999999999999999999999975 488999975 456789999999999999999999999887653
No 326
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-34 Score=315.29 Aligned_cols=192 Identities=27% Similarity=0.366 Sum_probs=158.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 104 (235)
T cd03261 28 ILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLRE 104 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhh
Confidence 47999999999999999999999987 999999998875422 245689999999999999999999886432
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.... +.. +.+..++++++.+||.+..++.+++ |||||||||+
T Consensus 105 ~~~~-------------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~ 146 (235)
T cd03261 105 HTRL-------------------SEE--------------EIREIVLEKLEAVGLRGAEDLYPAE-----LSGGMKKRVA 146 (235)
T ss_pred ccCC-------------------CHH--------------HHHHHHHHHHHHcCCchhhcCChhh-----CCHHHHHHHH
Confidence 1000 000 0012346678999998877777654 9999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||+||+.+|++++|||||+|||+.++..+++.|++++++.++|+|++.| ..+++.++||++++|++|++++.|+++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH-~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTH-DLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEec-CHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 9999999999999999999999999999999999987655889988755 456788899999999999999999987753
No 327
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.6e-33 Score=316.99 Aligned_cols=180 Identities=21% Similarity=0.261 Sum_probs=137.1
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKES 800 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~ 800 (1293)
+++.+++..++.-+..+++|+||+||||++|++.|...+ ..|.+.+++ +.+++|-.|...-+-++.|-+-
T Consensus 378 ~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~--------r~ri~~f~Qhhvd~l~~~v~~v 447 (582)
T KOG0062|consen 378 QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP--------RLRIKYFAQHHVDFLDKNVNAV 447 (582)
T ss_pred hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc--------cceecchhHhhhhHHHHHhHHH
Confidence 588999999999999999999999999999999996553 356665543 4568999998665545555442
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000773 801 LIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDA 879 (1293)
Q Consensus 801 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~ 879 (1293)
.+....+ ...++++ +++-+..+||.. .+... +.+||||||-||++|.....+|.+|+|||||+.||-
T Consensus 448 -d~~~~~~--pG~~~ee----~r~hl~~~Gl~g~la~~s-----i~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~ 515 (582)
T KOG0062|consen 448 -DFMEKSF--PGKTEEE----IRRHLGSFGLSGELALQS-----IASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDR 515 (582)
T ss_pred -HHHHHhC--CCCCHHH----HHHHHHhcCCCchhhhcc-----ccccCCcchhHHHHHHHhcCCCcEEEecCCCccccH
Confidence 2322222 2334443 467788899864 33322 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE
Q 000773 880 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI 927 (1293)
Q Consensus 880 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~ 927 (1293)
.+-..+.+.|+.. +..||++||+.+ -+-..|+.+.+..+ |++.
T Consensus 516 dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~-g~vt 558 (582)
T KOG0062|consen 516 DSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVED-GKVT 558 (582)
T ss_pred HHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcC-CcEE
Confidence 9999998888775 468999999854 35566788888875 6654
No 328
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.2e-33 Score=349.39 Aligned_cols=206 Identities=23% Similarity=0.285 Sum_probs=169.1
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcC-----------------------ccC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG-----------------------FPK 773 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g-----------------------~~~ 773 (1293)
++++.+|+|+||++++||+++|+||||||||||+++|+|.....+.+|+|.++| .++
T Consensus 10 ~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 10 FDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred ECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccccccccccccc
Confidence 345679999999999999999999999999999999999741013579999872 111
Q ss_pred ----------Ch---hcccceEEEEccC-CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000773 774 ----------KQ---ETFARISGYCEQN-DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIV 839 (1293)
Q Consensus 774 ----------~~---~~~~~~~~~v~q~-~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 839 (1293)
.. ...++.++|++|+ +.+++.+||+||+.+..... ....++..+++.++++.+|+.+..++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 166 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKEAVGRAVDLIEMVQLSHRITHIA 166 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCc
Confidence 00 1134568999997 67888999999998864332 1233444567889999999988777765
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhh
Q 000773 840 GLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 918 (1293)
Q Consensus 840 ~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~ 918 (1293)
+ +|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ .+.+.+|+++
T Consensus 167 ~-----~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~-~~~~~~d~i~ 240 (520)
T TIGR03269 167 R-----DLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE-VIEDLSDKAI 240 (520)
T ss_pred c-----cCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 4 79999999999999999999999999999999999999999999999654 899999999975 4667899999
Q ss_pred eeecCcEEEEeCCC
Q 000773 919 LLKRGGQVIYSGPL 932 (1293)
Q Consensus 919 ~l~~~G~~~~~g~~ 932 (1293)
+|.+ |++++.|+.
T Consensus 241 ~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 241 WLEN-GEIKEEGTP 253 (520)
T ss_pred EEeC-CEEeeecCH
Confidence 9985 899888875
No 329
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-34 Score=314.18 Aligned_cols=197 Identities=25% Similarity=0.377 Sum_probs=155.7
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+.+++|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++.. ...++.++|++|++.+++. |
T Consensus 16 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-t 92 (229)
T cd03254 16 KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSG-T 92 (229)
T ss_pred CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhh-H
Confidence 4599999999999999999999999999999999998763 47999999976532 2345679999999988775 9
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc------cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIV------GLPGVTGLSIEQRKRLTIAVELVANPSIIFM 870 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~------~~~~~~~lSgGerqrv~ia~aL~~~p~illl 870 (1293)
++||+.+... ..... .+++.++.+++.+..+... ....+.+|||||||||+||++|+.+|++++|
T Consensus 93 v~~~~~~~~~-----~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llll 163 (229)
T cd03254 93 IMENIRLGRP-----NATDE----EVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILIL 163 (229)
T ss_pred HHHHHhccCC-----CCCHH----HHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999976421 11111 2334445555443332221 0112457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 871 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 871 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
||||+|||+.++..+++.|++++ +|+|||++||+++ ++ ..+|++++|.+ |++++.|+.
T Consensus 164 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g~~~~~~~~ 221 (229)
T cd03254 164 DEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-GKIIEEGTH 221 (229)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999999999999986 5899999999975 34 56999999985 899887764
No 330
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=1.5e-33 Score=309.10 Aligned_cols=194 Identities=26% Similarity=0.394 Sum_probs=159.2
Q ss_pred eeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCC--CCCHHHHHHHHH
Q 000773 728 SAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSP--QVTVKESLIYSA 805 (1293)
Q Consensus 728 ~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~--~lTv~e~l~~~~ 805 (1293)
|++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... .++.++|++|++.+++ .+|+.||+.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPP--AKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 46899999999999999999999999998663 47999999987542 3467999999987643 489999997743
Q ss_pred HhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 000773 806 FLRLA-KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 884 (1293)
Q Consensus 806 ~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~ 884 (1293)
..... ......+...++.++++.+++.+..++.++ +||||||||++||++|+.+|++++|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPVG-----ELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 001112223457889999999877776654 699999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 885 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 885 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+.+.|++++++|+|||++||+++ ++.+.+|+++++ + |++++.|+.+
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999999877999999999975 577889999988 5 8999998865
No 331
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-34 Score=330.63 Aligned_cols=191 Identities=24% Similarity=0.309 Sum_probs=163.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.++||+|++.+|+.+||.||+.|+.+..+..
T Consensus 47 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 122 (377)
T PRK11607 47 IFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLP- 122 (377)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCC-
Confidence 47999999999999999999999988 999999999876533 3567999999999999999999999986532110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.. +.++.++++++.+||.+..++.+. +|||||||||+|||||
T Consensus 123 -------------------~~--------------~~~~~v~~~l~~l~L~~~~~~~~~-----~LSgGq~QRVaLARAL 164 (377)
T PRK11607 123 -------------------KA--------------EIASRVNEMLGLVHMQEFAKRKPH-----QLSGGQRQRVALARSL 164 (377)
T ss_pred -------------------HH--------------HHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHH
Confidence 00 012245678999999887776664 5999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||++||..++..+.+.|+++.++.+.|+|+++ |+..++..++||+++|++|+++..|+++++.
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vT-Hd~~ea~~laDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVT-HDQEEAMTMAGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHhCCEEEEEeCCEEEEEcCHHHHH
Confidence 9999999999999999999999999999998776789999974 5567899999999999999999999998874
No 332
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=328.00 Aligned_cols=195 Identities=26% Similarity=0.380 Sum_probs=163.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++||+|++.+++.+||+||+.|+.+......
T Consensus 30 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~ 106 (353)
T PRK10851 30 MVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRE 106 (353)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhccccc
Confidence 47999999999999999999999988 999999999876433 24679999999999999999999999764311000
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
. . +.. +.++.++++++.+||++..|+.+. .|||||||||+|||||
T Consensus 107 ~---~-------------~~~--------------~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgGq~QRvalArAL 151 (353)
T PRK10851 107 R---P-------------NAA--------------AIKAKVTQLLEMVQLAHLADRYPA-----QLSGGQKQRVALARAL 151 (353)
T ss_pred C---C-------------CHH--------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHH
Confidence 0 0 000 012245678999999887777665 5999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++ +|+..++..++|||++|++|++++.|+++++.
T Consensus 152 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~v-THd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 152 AVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFV-THDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999987668899886 45567899999999999999999999998874
No 333
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-33 Score=314.55 Aligned_cols=197 Identities=26% Similarity=0.354 Sum_probs=163.2
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.. +++.+|+++||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 5 l~~~~l~~~~-------------~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~~~--- 66 (251)
T PRK09544 5 VSLENVSVSF-------------GQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAP--DEGVIKRNGK--- 66 (251)
T ss_pred EEEeceEEEE-------------CCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCc---
Confidence 5666666543 345699999999999999999999999999999999998763 4799999862
Q ss_pred hhcccceEEEEccCCCCCCCC--CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000773 775 QETFARISGYCEQNDIHSPQV--TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQR 852 (1293)
Q Consensus 775 ~~~~~~~~~~v~q~~~~~~~l--Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 852 (1293)
..++|++|++.+++.+ |+.+++.+. .... .+++.++++.+|+.+..++.+. .||||||
T Consensus 67 -----~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~ 126 (251)
T PRK09544 67 -----LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPMQ-----KLSGGET 126 (251)
T ss_pred -----cCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCChh-----hCCHHHH
Confidence 3589999998877764 777776431 1111 1236788999999887777654 7999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCC
Q 000773 853 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGP 931 (1293)
Q Consensus 853 qrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~ 931 (1293)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. + +++..|+
T Consensus 127 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g~ 203 (251)
T PRK09544 127 QRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSGT 203 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeCC
Confidence 9999999999999999999999999999999999999998766 899999999975 5678899999994 4 6888887
Q ss_pred C
Q 000773 932 L 932 (1293)
Q Consensus 932 ~ 932 (1293)
.
T Consensus 204 ~ 204 (251)
T PRK09544 204 P 204 (251)
T ss_pred H
Confidence 5
No 334
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2e-34 Score=278.48 Aligned_cols=200 Identities=23% Similarity=0.371 Sum_probs=168.8
Q ss_pred cccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccC
Q 000773 712 EQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQN 788 (1293)
Q Consensus 712 ~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~ 788 (1293)
+++...++.++|+++||++++||..+|.||||||||||+|+++...++ .+|.+++.|++.+. ..+++.++||.|.
T Consensus 8 q~~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp--~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~ 85 (223)
T COG4619 8 QVGYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDVSTLKPEAYRQQVSYCAQT 85 (223)
T ss_pred HHHhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCC--CCceEEEcCccccccChHHHHHHHHHHHcC
Confidence 334444567899999999999999999999999999999999998774 58999999998653 5678889999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 789 DIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLK-DAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 789 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+.+++. ||++|+.|.-.+|..+. ++ ....+.++.+++.+.. ++. +..||||||||++|+|.|..-|+|
T Consensus 86 paLfg~-tVeDNlifP~~~r~rr~-dr----~aa~~llar~~l~~~~L~k~-----it~lSGGE~QriAliR~Lq~~P~I 154 (223)
T COG4619 86 PALFGD-TVEDNLIFPWQIRNRRP-DR----AAALDLLARFALPDSILTKN-----ITELSGGEKQRIALIRNLQFMPKI 154 (223)
T ss_pred cccccc-chhhccccchHHhccCC-Ch----HHHHHHHHHcCCchhhhcch-----hhhccchHHHHHHHHHHhhcCCce
Confidence 999986 99999999877765332 11 2356788899987632 332 347999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHHhHhheeecCcEE
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQV 926 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~ 926 (1293)
|+||||||.||+.+++.|-++|.++. ++.+.|+.+||+++ +..+.+|+++-+.. |++
T Consensus 155 LLLDE~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~d-qa~rha~k~itl~~-G~~ 212 (223)
T COG4619 155 LLLDEITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKD-QAIRHADKVITLQP-GHA 212 (223)
T ss_pred EEecCchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChH-HHhhhhheEEEecc-Ccc
Confidence 99999999999999999999999987 56899999999986 56889999999985 553
No 335
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-33 Score=361.53 Aligned_cols=209 Identities=28% Similarity=0.364 Sum_probs=174.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++++.+. +++.+|+|+|++++|||.+||+||||||||||+|+|+|..++ .+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEc
Confidence 5899999987631 235699999999999999999999999999999999998763 589999999986
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.+|||+|++.+++. |++||+.++. + .+++ .+.++++..|+.+. .|+.+|+.
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~~~~----~--~~~e----~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMSG-SIFENIAGGA----P--LTLD----EAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCcc-cHHHHHhcCC----C--CCHH----HHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 53 4567889999999999865 9999998631 1 2332 25677777777643 35666643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++|+||||||+||+.+++.+.+.|+++ ++|+|+++|++ +..+.+|++++|++
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~--~~i~~~D~Iivl~~- 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRL--STIRNADRIYVLDA- 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecCh--HHHHcCCEEEEEEC-
Confidence 4679999999999999999999999999999999999999999999876 58999999996 46678999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|+++..|+.+
T Consensus 660 G~iv~~G~~~ 669 (686)
T TIGR03797 660 GRVVQQGTYD 669 (686)
T ss_pred CEEEEECCHH
Confidence 9999999853
No 336
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.9e-33 Score=348.14 Aligned_cols=204 Identities=22% Similarity=0.278 Sum_probs=168.8
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCC---ceeEEEEEcCccCChh------cc-cceEEEEccCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIRISGFPKKQE------TF-ARISGYCEQND 789 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~---~~~G~i~~~g~~~~~~------~~-~~~~~~v~q~~ 789 (1293)
+.+|+||||++++||++||+||||||||||+++|+|..++. +.+|+|.++|.++... .. ++.+||++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999976531 2579999999875321 11 24699999997
Q ss_pred C--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---ccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000773 790 I--HSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL---KDAIVGLPGVTGLSIEQRKRLTIAVELVAN 864 (1293)
Q Consensus 790 ~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---~~~~~~~~~~~~lSgGerqrv~ia~aL~~~ 864 (1293)
. +.+.+|++|++.+...... ..+..+..++++++++.+|+.+. .++.++ +|||||||||+|||||+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-----~LSgGe~qrv~iAraL~~~ 174 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHR--GMRREAARGEILNCLDRVGIRQAAKRLTDYPH-----QLSGGERQRVMIAMALLTR 174 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhhCCc-----ccCHHHHHHHHHHHHHhcC
Confidence 4 6678899999876432211 12344445668899999999763 455544 7999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 865 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 865 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|++|+|||||+|||+.++..++++|++++++ |+|||++||+++ .+...+|++++|.+ |++++.|+.
T Consensus 175 p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dri~~l~~-G~i~~~g~~ 241 (529)
T PRK15134 175 PELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADRVAVMQN-GRCVEQNRA 241 (529)
T ss_pred CCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999999765 899999999975 56778999999985 899998875
No 337
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=9.7e-34 Score=300.59 Aligned_cols=160 Identities=24% Similarity=0.466 Sum_probs=141.5
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEccCC---CCCCC
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQND---IHSPQ 794 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~~ 794 (1293)
+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP--ASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 89999999999999999999999999999999998763 47999999987643 12356799999984 57888
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+|++||+.+... ||||||||++||+||+.+|++++|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999875310 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 875 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
+|||+.++..+.+.|++++++|+|+|+++|+++ ++.+.+|++++|.+ |+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999999777899999999975 57778999999975 65
No 338
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=351.48 Aligned_cols=219 Identities=20% Similarity=0.280 Sum_probs=176.7
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC-
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK- 773 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~- 773 (1293)
++.+|+++..... .+...+|+||||++++||++||+||||||||||+++|+|...+ .+|+|.++|...
T Consensus 13 l~v~~l~~~y~~~---------~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p--~~G~i~~~g~~~~ 81 (623)
T PRK10261 13 LAVENLNIAFMQE---------QQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQ--AGGLVQCDKMLLR 81 (623)
T ss_pred EEEeceEEEecCC---------CCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCC--CCeEEEECCEEec
Confidence 6778887655311 1134699999999999999999999999999999999998653 468888887532
Q ss_pred ------------Chh---cc-cceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--
Q 000773 774 ------------KQE---TF-ARISGYCEQND--IHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-- 833 (1293)
Q Consensus 774 ------------~~~---~~-~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-- 833 (1293)
... .. ++.+|||+|++ .+++.+||.||+.+...... ..+.++..+++.++++.+||.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~ 159 (623)
T PRK10261 82 RRSRQVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQ--GASREEAMVEAKRMLDQVRIPEAQ 159 (623)
T ss_pred cccccccccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChh
Confidence 111 11 24689999997 67889999999998754321 2334444567889999999953
Q ss_pred -cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHH
Q 000773 834 -LKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIF 911 (1293)
Q Consensus 834 -~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~ 911 (1293)
..++.+. +|||||||||+||+||+.+|++|||||||++||+.++..+.++|++++++ |+|||++||+++ .+.
T Consensus 160 ~~~~~~~~-----~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~-~~~ 233 (623)
T PRK10261 160 TILSRYPH-----QLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMG-VVA 233 (623)
T ss_pred hHHhCCCc-----cCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHH
Confidence 3455544 79999999999999999999999999999999999999999999999865 899999999975 567
Q ss_pred HHHhHhheeecCcEEEEeCCCC
Q 000773 912 EAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 912 ~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
+.+|++++|.+ |++++.|+.+
T Consensus 234 ~~adri~vl~~-G~i~~~g~~~ 254 (623)
T PRK10261 234 EIADRVLVMYQ-GEAVETGSVE 254 (623)
T ss_pred HhCCEEEEeeC-CeecccCCHH
Confidence 88999999985 8999888753
No 339
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.5e-33 Score=325.39 Aligned_cols=191 Identities=28% Similarity=0.380 Sum_probs=162.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+|++.+.....+..
T Consensus 69 i~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 145 (340)
T PRK13536 69 CFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMS 145 (340)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 99999999887542 23567999999999999999999998755432110
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
. . +.+..++.+++.+||.+..++.+++ ||||||||++||+|
T Consensus 146 ~--------------------~--------------~~~~~~~~ll~~~~L~~~~~~~~~~-----LS~G~kqrv~lA~a 186 (340)
T PRK13536 146 T--------------------R--------------EIEAVIPSLLEFARLESKADARVSD-----LSGGMKRRLTLARA 186 (340)
T ss_pred H--------------------H--------------HHHHHHHHHHHHcCCchhhCCChhh-----CCHHHHHHHHHHHH
Confidence 0 0 0011245678899999888888865 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|+++|++++|||||+|||+.++..+++.|+++++ .|+|||++. |..+++.++||||++|++|++++.|+++++.+
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilisS-H~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTT-HFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEC-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999976 589999975 55678999999999999999999999998865
No 340
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=330.36 Aligned_cols=191 Identities=22% Similarity=0.355 Sum_probs=162.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++||+|++.+++.+||+||+.|+.+..+..
T Consensus 31 ~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~- 106 (369)
T PRK11000 31 FVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAK- 106 (369)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999988 999999998876432 2456999999999999999999999876432110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.. +.+..++++++.+||++..++.+++ |||||||||+|||||
T Consensus 107 -------------------~~--------------~~~~~~~~~l~~lgL~~~~~~~~~~-----LSgGq~QRvaLAraL 148 (369)
T PRK11000 107 -------------------KE--------------EINQRVNQVAEVLQLAHLLDRKPKA-----LSGGQRQRVAIGRTL 148 (369)
T ss_pred -------------------HH--------------HHHHHHHHHHHHcCChhhhcCChhh-----CCHHHHHHHHHHHHH
Confidence 00 0112356789999998877777754 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|+++| ..+++..++|++++|++|+++..|+++++.
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTH-d~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTH-DQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999998766889998755 556888999999999999999999998874
No 341
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=355.89 Aligned_cols=212 Identities=24% Similarity=0.354 Sum_probs=175.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++|..+. +++.+|+|+|+++++||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEEh
Confidence 5899999887531 235699999999999999999999999999999999998764 479999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
++ ..+++.++|+||++.+++ -|++||+.++. +...++++ ++++++..|+.+ -.|+.+|..
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~~~----i~~al~~~~l~~~i~~lp~Gldt~ig~~- 477 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSREQ----IEEAARMAYAMDFINKMDNGLDTVIGEN- 477 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCHHH----HHHHHHHhCcHHHHHhcccccCceeCCC-
Confidence 53 356778999999999886 59999997631 11223332 556677766543 246667753
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
...||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++. +++|+|++||++ +..+.+|+|++|++
T Consensus 478 g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~--~~~~~~D~Ii~l~~- 553 (582)
T PRK11176 478 GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRL--STIEKADEILVVED- 553 (582)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecch--HHHHhCCEEEEEEC-
Confidence 46799999999999999999999999999999999999999999999875 479999999997 46788999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 554 g~i~e~g~~ 562 (582)
T PRK11176 554 GEIVERGTH 562 (582)
T ss_pred CEEEEeCCH
Confidence 899999985
No 342
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.3e-34 Score=355.54 Aligned_cols=211 Identities=28% Similarity=0.484 Sum_probs=175.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++|+|+++..+. ++++|+|+||+++|||.+||+||||||||||++.|.|..++ .+|+|.+||.++
T Consensus 328 ~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~dI 393 (567)
T COG1132 328 SIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGIDI 393 (567)
T ss_pred eEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEeh
Confidence 5899999887532 46799999999999999999999999999999999998764 589999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-------CcccccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVE-------LESLKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-------l~~~~~~~~~~~~ 843 (1293)
++ ..+++.++||+|++.+|. -||+||+.++. .+.++++ +.++++..+ +.+..|+.+|. +
T Consensus 394 ~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge-~ 462 (567)
T COG1132 394 RDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGE-R 462 (567)
T ss_pred hhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecC-C
Confidence 54 456788999999999988 79999998752 1133433 333333332 33356888883 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
...||||||||++||||++++|++|+||||||+||+.+...+++.++++. +++|+|+++|+++ ....+|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~- 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN- 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC-
Confidence 56799999999999999999999999999999999999999999999876 5789999999975 5566999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|++++.|+.+
T Consensus 539 G~i~e~G~h~ 548 (567)
T COG1132 539 GRIVERGTHE 548 (567)
T ss_pred CEEEEecCHH
Confidence 8999999863
No 343
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-33 Score=352.81 Aligned_cols=211 Identities=27% Similarity=0.433 Sum_probs=176.0
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+. +++.+|+|+|++++|||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 338 ~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~i 404 (574)
T PRK11160 338 SLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQPI 404 (574)
T ss_pred eEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEh
Confidence 5899999886531 124699999999999999999999999999999999998763 579999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLK------DAIVGLPGV 844 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~------~~~~~~~~~ 844 (1293)
++ ..+++.++||+|++.+++ .|++||+.++. + ..+++ .+.++++..++.+.. |+.+|. +.
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~~~----~i~~al~~~~l~~~i~~p~GldT~vge-~g 473 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NASDE----ALIEVLQQVGLEKLLEDDKGLNAWLGE-GG 473 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-ccCHH----HHHHHHHHcCCHHHHcCccccCchhcC-CC
Confidence 53 356778999999998886 49999997642 1 22222 367788888887643 455554 34
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
..||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++. +++|+|+++|+++ ....+|++++|++ |
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~-G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN-G 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-C
Confidence 6799999999999999999999999999999999999999999999885 4899999999975 4567999999985 8
Q ss_pred EEEEeCCC
Q 000773 925 QVIYSGPL 932 (1293)
Q Consensus 925 ~~~~~g~~ 932 (1293)
+++..|+.
T Consensus 550 ~i~~~g~~ 557 (574)
T PRK11160 550 QIIEQGTH 557 (574)
T ss_pred eEEEeCCH
Confidence 99999985
No 344
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-34 Score=314.84 Aligned_cols=196 Identities=26% Similarity=0.404 Sum_probs=154.7
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++ .|
T Consensus 14 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 90 (236)
T cd03253 14 RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYD--VSSGSILIDGQDIREVTLDSLRRAIGVVPQDTVLFN-DT 90 (236)
T ss_pred CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEhhhCCHHHHHhhEEEECCCChhhc-ch
Confidence 469999999999999999999999999999999999865 357999999986532 234567999999998875 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAI-------VGLPGVTGLSIEQRKRLTIAVELVANPSIIF 869 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-------~~~~~~~~lSgGerqrv~ia~aL~~~p~ill 869 (1293)
|+||+.+... ....++ +.+.++..++.+..+.. .. ...+.||||||||++||+||+.+|++|+
T Consensus 91 v~~nl~~~~~-----~~~~~~----~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~~~LS~G~~~rl~la~aL~~~p~lll 160 (236)
T cd03253 91 IGYNIRYGRP-----DATDEE----VIEAAKAAQIHDKIMRFPDGYDTIVG-ERGLKLSGGEKQRVAIARAILKNPPILL 160 (236)
T ss_pred HHHHHhhcCC-----CCCHHH----HHHHHHHcCcHHHHHhccccccchhh-cCCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999976421 111211 22333344433221111 11 1245799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCC
Q 000773 870 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 870 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|||||+|||+.+...+.+.|+++++ |+|||+++|+++ .+ ..+|++++|.+ |+++..|+.
T Consensus 161 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~-~~~d~~~~l~~-g~i~~~~~~ 219 (236)
T cd03253 161 LDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLS-TI-VNADKIIVLKD-GRIVERGTH 219 (236)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HH-HhCCEEEEEEC-CEEEeeCCH
Confidence 9999999999999999999999876 999999999975 34 55999999985 899888764
No 345
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.6e-33 Score=307.94 Aligned_cols=209 Identities=22% Similarity=0.330 Sum_probs=163.9
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++.... +++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 69 (221)
T cd03244 3 IEFKNVSLRYRP-----------NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVE--LSSGSILIDGVDIS 69 (221)
T ss_pred EEEEEEEEecCC-----------CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCCEEEECCEEhH
Confidence 567777654421 12469999999999999999999999999999999999865 35799999998753
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc------cCCCCC
Q 000773 775 Q---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIV------GLPGVT 845 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~------~~~~~~ 845 (1293)
. ..+++.++|++|++.+++ .||+||+.+.. .... ..+.+.++.+++.+..++.. ......
T Consensus 70 ~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~------~~~~----~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~ 138 (221)
T cd03244 70 KIGLHDLRSRISIIPQDPVLFS-GTIRSNLDPFG------EYSD----EELWQALERVGLKEFVESLPGGLDTVVEEGGE 138 (221)
T ss_pred hCCHHHHhhhEEEECCCCcccc-chHHHHhCcCC------CCCH----HHHHHHHHHhCcHHHHHhcccccccccccCCC
Confidence 2 234567999999998775 59999986421 1122 22456677777665433210 011345
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++ ..+|++++|.+ |+
T Consensus 139 ~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~-g~ 214 (221)
T cd03244 139 NLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFK-DCTVLTIAHRLD-TI-IDSDRILVLDK-GR 214 (221)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-hhCCEEEEEEC-Ce
Confidence 8999999999999999999999999999999999999999999999864 689999999975 34 55999999985 89
Q ss_pred EEEeCC
Q 000773 926 VIYSGP 931 (1293)
Q Consensus 926 ~~~~g~ 931 (1293)
+++.|+
T Consensus 215 ~~~~~~ 220 (221)
T cd03244 215 VVEFDS 220 (221)
T ss_pred EEecCC
Confidence 988775
No 346
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2e-34 Score=285.58 Aligned_cols=211 Identities=24% Similarity=0.364 Sum_probs=177.8
Q ss_pred cccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcC-ccCCh---hc-ccceEEEEc
Q 000773 712 EQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG-FPKKQ---ET-FARISGYCE 786 (1293)
Q Consensus 712 ~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g-~~~~~---~~-~~~~~~~v~ 786 (1293)
++++++++.++|+++||++.|||+-+|+|||||||||++++|+|...+ ..|++.++| .++.. .. .+.-||--+
T Consensus 10 ~vsVsF~GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtrp--~~G~v~f~g~~dl~~~~e~~IAr~GIGRKF 87 (249)
T COG4674 10 GVSVSFGGFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTRP--QEGEVLFDGDTDLTKLPEHRIARAGIGRKF 87 (249)
T ss_pred ceEEEEcceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCCC--CcceEEEcCchhhccCCHHHHHHhccCccc
Confidence 334456778899999999999999999999999999999999997763 479999999 55432 12 234588999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCC------CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHH
Q 000773 787 QNDIHSPQVTVKESLIYSAFLRLA------KEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVE 860 (1293)
Q Consensus 787 q~~~~~~~lTv~e~l~~~~~~~~~------~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~a 860 (1293)
|.|..|+.+||+|||..+...... .... .+..++++++++..||.+.+|...+ .||.||||++.|++.
T Consensus 88 Q~PtVfe~ltV~eNLelA~~~~k~v~a~L~~r~~-~~e~~ride~La~igL~~~~~~~A~-----~LSHGqKQwLEIGMl 161 (249)
T COG4674 88 QKPTVFENLTVRENLELALNRDKSVFASLFARLR-AEERRRIDELLATIGLGDERDRLAA-----LLSHGQKQWLEIGML 161 (249)
T ss_pred cCCeehhhccHHHHHHHHhcCCcchHHHhhhhcC-hhHHHHHHHHHHHcccchhhhhhhh-----hhccchhhhhhhhee
Confidence 999999999999999986532210 1112 2334578999999999999998877 599999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 861 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 861 L~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
++++|++|+||||++|+-.......-++|++++. +++|+++.||+. -+.+++|+|.+|.+ |.+...|+.+
T Consensus 162 l~Q~P~lLLlDEPvAGMTd~Et~~taeLl~~la~-~hsilVVEHDM~-Fvr~~A~~VTVlh~-G~VL~EGsld 231 (249)
T COG4674 162 LAQDPKLLLLDEPVAGMTDAETEKTAELLKSLAG-KHSILVVEHDMG-FVREIADKVTVLHE-GSVLAEGSLD 231 (249)
T ss_pred eccCCcEEEecCccCCCcHHHHHHHHHHHHHHhc-CceEEEEeccHH-HHHHhhheeEEEec-cceeecccHH
Confidence 9999999999999999999999999999999975 689999999975 47788999999985 8999999875
No 347
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-33 Score=353.64 Aligned_cols=210 Identities=25% Similarity=0.382 Sum_probs=176.2
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+ +++.+|+|+|+++++||.+||+|+||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 340 ~i~~~~v~f~y~------------~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 405 (592)
T PRK10790 340 RIDIDNVSFAYR------------DDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRPL 405 (592)
T ss_pred eEEEEEEEEEeC------------CCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEh
Confidence 588999988763 123599999999999999999999999999999999998764 479999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.++||||++.+++. |++||+.++. ..+++ +++++++.+|+.+. .|+.++. .
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~d~----~i~~a~~~~gl~~~i~~lp~Gldt~i~e-~ 473 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DISEE----QVWQALETVQLAELARSLPDGLYTPLGE-Q 473 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCCHH----HHHHHHHHcCcHHHHHhccccccccccC-C
Confidence 53 4567889999999999986 9999998742 12232 25677888887643 3555654 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++|+||||||+||+.+++.+.+.|+++.+ ++|+|+++|++ +....+|++++|++
T Consensus 474 g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~--~~l~~~D~ii~l~~- 549 (592)
T PRK10790 474 GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRL--STIVEADTILVLHR- 549 (592)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecch--HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999998864 69999999997 46678999999985
Q ss_pred cEEEEeCCCC
Q 000773 924 GQVIYSGPLG 933 (1293)
Q Consensus 924 G~~~~~g~~~ 933 (1293)
|+++..|+.+
T Consensus 550 G~i~~~G~~~ 559 (592)
T PRK10790 550 GQAVEQGTHQ 559 (592)
T ss_pred CEEEEEcCHH
Confidence 9999999863
No 348
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=2.2e-33 Score=302.39 Aligned_cols=174 Identities=26% Similarity=0.315 Sum_probs=146.8
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh---c-ccceEEEEccCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE---T-FARISGYCEQNDIHSP 793 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~~ 793 (1293)
+++.+|+|+||++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.... . .++.++|++|++.+++
T Consensus 11 ~~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (200)
T cd03217 11 GGKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGIFLAFQYPPEIP 90 (200)
T ss_pred CCEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCcEEEeecChhhcc
Confidence 34569999999999999999999999999999999999742114579999999876431 1 2345999999998888
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
..|+++++. .. .+.||||||||++|||+|+.+|++++||||
T Consensus 91 ~~~~~~~l~----------------------------------~~-----~~~LS~G~~qrv~laral~~~p~illlDEP 131 (200)
T cd03217 91 GVKNADFLR----------------------------------YV-----NEGFSGGEKKRNEILQLLLLEPDLAILDEP 131 (200)
T ss_pred CccHHHHHh----------------------------------hc-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 888887650 00 126999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHH-HHhHhheeecCcEEEEeCCC
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE-AFDELLLLKRGGQVIYSGPL 932 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~-~~d~v~~l~~~G~~~~~g~~ 932 (1293)
|+|||+.++..+.+.|++++++|+|||++||+++ .+.+ .+|++++|.+ |+++..|+.
T Consensus 132 t~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~~~~ 189 (200)
T cd03217 132 DSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKSGDK 189 (200)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEEccH
Confidence 9999999999999999999877899999999975 3444 6999999985 899998853
No 349
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.9e-33 Score=295.75 Aligned_cols=155 Identities=30% Similarity=0.494 Sum_probs=137.9
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lT 796 (1293)
+.+++++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++. |
T Consensus 15 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-t 91 (173)
T cd03246 15 PPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRP--TSGRVRLDGADISQWDPNELGDHVGYLPQDDELFSG-S 91 (173)
T ss_pred CcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEEcccCCHHHHHhheEEECCCCccccC-c
Confidence 4599999999999999999999999999999999998663 47999999987532 2345679999999988774 9
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
|+||+ ||||||||++||+||+.+|++++|||||+|
T Consensus 92 v~~~l---------------------------------------------LS~G~~qrv~la~al~~~p~~lllDEPt~~ 126 (173)
T cd03246 92 IAENI---------------------------------------------LSGGQRQRLGLARALYGNPRILVLDEPNSH 126 (173)
T ss_pred HHHHC---------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEECCccc
Confidence 98876 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 877 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
||+.++..+.+.|++++++|+|||+++|+++ ..+.+|++++|.+ |+
T Consensus 127 LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-G~ 172 (173)
T cd03246 127 LDVEGERALNQAIAALKAAGATRIVIAHRPE--TLASADRILVLED-GR 172 (173)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEEEC-CC
Confidence 9999999999999999877999999999974 4468999999975 65
No 350
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-34 Score=296.23 Aligned_cols=215 Identities=24% Similarity=0.440 Sum_probs=177.7
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
-+.++|++. .+++++||+|||++|+|||-.+|+|||||||||||++++|...++ +|.+.+.|++.
T Consensus 31 li~l~~v~v-------------~r~gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~ps--sg~~~~~G~~~ 95 (257)
T COG1119 31 LIELKNVSV-------------RRNGKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPS--SGDVTLLGRRF 95 (257)
T ss_pred eEEecceEE-------------EECCEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCC--CCceeeeeeec
Confidence 466666654 456789999999999999999999999999999999999976643 78999998875
Q ss_pred Ch----hcccceEEEEccC--CCCCCCCCHHHHHHHHHH--hcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000773 774 KQ----ETFARISGYCEQN--DIHSPQVTVKESLIYSAF--LRLAK-EVSKEDKIIFVEEVMDLVELESLKDAIVGLPGV 844 (1293)
Q Consensus 774 ~~----~~~~~~~~~v~q~--~~~~~~lTv~e~l~~~~~--~~~~~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 844 (1293)
.. ...++.||+|.-. ..+.++.+|+|-+.-+.. .-... ..+ ++...++..+++.+|+.+.+|+..+
T Consensus 96 G~~~~~~elrk~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~-~~~~~~a~~lle~~g~~~la~r~~~---- 170 (257)
T COG1119 96 GKGETIFELRKRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLT-AEDLAAAQWLLELLGAKHLADRPFG---- 170 (257)
T ss_pred cCCcchHHHHHHhCccCHHHHhhcccccccceeeeecccccccccccCCC-HHHHHHHHHHHHHcchhhhccCchh----
Confidence 33 3467889999753 345567888887753322 22222 233 3445678899999999999999887
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
.||-||||||-|||||+++|.+||||||++|||...++.+.+.|.+++.. +.++|++||+++ |+...|++++++++
T Consensus 171 -~LS~Ge~rrvLiaRALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~e-Ei~~~~th~lll~~ 248 (257)
T COG1119 171 -SLSQGEQRRVLIARALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAE-EIPPCFTHRLLLKE 248 (257)
T ss_pred -hcCHhHHHHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchh-hcccccceEEEeeC
Confidence 69999999999999999999999999999999999999999999999865 789999999986 78899999999985
Q ss_pred CcEEEEeCC
Q 000773 923 GGQVIYSGP 931 (1293)
Q Consensus 923 ~G~~~~~g~ 931 (1293)
|+++++|.
T Consensus 249 -g~v~~~g~ 256 (257)
T COG1119 249 -GEVVAQGK 256 (257)
T ss_pred -Cceeeccc
Confidence 89998874
No 351
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-33 Score=307.55 Aligned_cols=190 Identities=28% Similarity=0.359 Sum_probs=157.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+|++.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 104 (220)
T cd03265 28 IFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVP 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999876432 12356899999999999999999998865432110
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.. +.+..++++++.+||++..++.+++ ||||||||++||+|
T Consensus 105 --------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr~~la~a 145 (220)
T cd03265 105 --------------------GA--------------ERRERIDELLDFVGLLEAADRLVKT-----YSGGMRRRLEIARS 145 (220)
T ss_pred --------------------HH--------------HHHHHHHHHHHHcCCHHHhhCChhh-----CCHHHHHHHHHHHH
Confidence 00 0112356689999998877777754 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
++.+|++++|||||+|||+.++..+.+.|+++++++++|+|++.| ..+++.+.+|++++|++|+++..|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH-~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTH-YMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999999997755889888754 55688889999999999999999887653
No 352
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=325.23 Aligned_cols=191 Identities=24% Similarity=0.319 Sum_probs=161.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 33 i~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~ 109 (343)
T PRK11153 33 IFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLEL 109 (343)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999998876432 245799999999999999999999987543
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. ..+ .+..++++++.+||++..++.++ .|||||||||+
T Consensus 110 ~~~~--------------------~~~--------------~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~qRv~ 150 (343)
T PRK11153 110 AGTP--------------------KAE--------------IKARVTELLELVGLSDKADRYPA-----QLSGGQKQRVA 150 (343)
T ss_pred cCCC--------------------HHH--------------HHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHH
Confidence 2110 000 01235668899999887777665 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||||+.+|++++|||||+|||+.++..+++.|++++++.|+|+|+++| ..+++.++||++++|++|++++.|+.+++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH-~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITH-EMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999999998766889999755 456888899999999999999999988874
No 353
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.2e-33 Score=296.90 Aligned_cols=161 Identities=27% Similarity=0.510 Sum_probs=140.6
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCHH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVTVK 798 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lTv~ 798 (1293)
.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++ .|++
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~ 92 (178)
T cd03247 16 QVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKP--QQGEITLDGVPVSDLEKALSSLISVLNQRPYLFD-TTLR 92 (178)
T ss_pred cceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCEEHHHHHHHHHhhEEEEccCCeeec-ccHH
Confidence 599999999999999999999999999999999998653 47999999986532 234567999999988775 6998
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000773 799 ESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLD 878 (1293)
Q Consensus 799 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD 878 (1293)
||+ ...||||||||++|||||+.+|++|+|||||+|||
T Consensus 93 ~~i------------------------------------------~~~LS~G~~qrv~laral~~~p~~lllDEP~~~LD 130 (178)
T cd03247 93 NNL------------------------------------------GRRFSGGERQRLALARILLQDAPIVLLDEPTVGLD 130 (178)
T ss_pred Hhh------------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEECCcccCC
Confidence 876 12699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 879 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 879 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
+.++..+++.|++++ +++|||+++|+++ .+ +.+|++++|.+ |++++.|
T Consensus 131 ~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~~~~l~~-g~i~~~~ 178 (178)
T cd03247 131 PITERQLLSLIFEVL-KDKTLIWITHHLT-GI-EHMDKILFLEN-GKIIMQG 178 (178)
T ss_pred HHHHHHHHHHHHHHc-CCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEecC
Confidence 999999999999985 5899999999975 34 57999999985 8887654
No 354
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=318.36 Aligned_cols=224 Identities=30% Similarity=0.438 Sum_probs=184.5
Q ss_pred CccccccceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeE
Q 000773 685 GMVLPFTPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEG 764 (1293)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G 764 (1293)
.+.+|.+...++.+++++-. + ..++.+|+|+||++.+||.+||+||||||||||.|+|.|.-. +..|
T Consensus 325 ~m~LP~P~g~L~Ve~l~~~P---P--------g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p~~G 391 (580)
T COG4618 325 RMPLPAPQGALSVERLTAAP---P--------GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--PTSG 391 (580)
T ss_pred CCCCCCCCceeeEeeeeecC---C--------CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--cCCC
Confidence 35667677788999998732 2 134689999999999999999999999999999999999765 3579
Q ss_pred EEEEcCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHcCCccccc
Q 000773 765 DIRISGFPKKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKI-----IFVEEVMDLVELESLKD 836 (1293)
Q Consensus 765 ~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~l~~~~~ 836 (1293)
.|.+||.+.++ +.+-+.+||.||+-.+|+. ||.||+. |...+.+.+... ..+.|++ +.+.+-.|
T Consensus 392 ~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelI--l~lP~GYd 463 (580)
T COG4618 392 SVRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIA-----RFGEEADPEKVIEAARLAGVHELI--LRLPQGYD 463 (580)
T ss_pred cEEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHH-----hccccCCHHHHHHHHHHcChHHHH--HhCcCCcc
Confidence 99999988754 3456789999999999875 9999995 333333333211 1122322 45666788
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhH
Q 000773 837 AIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 916 (1293)
Q Consensus 837 ~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~ 916 (1293)
+.+|.. ..+||||||||+++||||-.+|.+++||||-|+||......+.+.|.+++++|+|+|+++|+|+ +...+|+
T Consensus 464 T~iG~~-G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~~Dk 540 (580)
T COG4618 464 TRIGEG-GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALASVDK 540 (580)
T ss_pred CccCCC-CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhhcce
Confidence 999964 4689999999999999999999999999999999999999999999999999999999999985 7788999
Q ss_pred hheeecCcEEEEeCCCC
Q 000773 917 LLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 917 v~~l~~~G~~~~~g~~~ 933 (1293)
+++|. +|++..+|+.+
T Consensus 541 ilvl~-~G~~~~FG~r~ 556 (580)
T COG4618 541 ILVLQ-DGRIAAFGPRE 556 (580)
T ss_pred eeeec-CChHHhcCCHH
Confidence 99997 59999999974
No 355
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6.6e-34 Score=313.62 Aligned_cols=206 Identities=23% Similarity=0.362 Sum_probs=161.6
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++++++..+.. +++.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 12 l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 79 (226)
T cd03248 12 VKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQP--QGGQVLLDGKPIS 79 (226)
T ss_pred EEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCcEEEECCCchH
Confidence 6778887655210 123599999999999999999999999999999999998653 4799999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCH-HH--HHHHHHHHHHHc--CCcccccccccCCCCCC
Q 000773 775 Q---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSK-ED--KIIFVEEVMDLV--ELESLKDAIVGLPGVTG 846 (1293)
Q Consensus 775 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~-~~--~~~~~~~~l~~l--~l~~~~~~~~~~~~~~~ 846 (1293)
. ...++.++|++|++.+++ .||+||+.+.... ..... .+ ....+++.++.+ |+.+..+..+ +.
T Consensus 80 ~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~-----~~ 150 (226)
T cd03248 80 QYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQS---CSFECVKEAAQKAHAHSFISELASGYDTEVGEKG-----SQ 150 (226)
T ss_pred HcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCC---CCHHHHHHHHHHcCcHHHHHhccccccchhhcCC-----Cc
Confidence 2 234567999999998876 5999999764321 11000 01 112245777777 6766555543 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 847 LSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 847 lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++ ..+|++++|.+ |+
T Consensus 151 LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~-g~ 225 (226)
T cd03248 151 LSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLS-TV-ERADQILVLDG-GR 225 (226)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHH-HH-HhCCEEEEecC-Cc
Confidence 999999999999999999999999999999999999999999999865 689999999975 34 56999999975 65
No 356
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-33 Score=305.37 Aligned_cols=185 Identities=28% Similarity=0.388 Sum_probs=153.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~- 103 (213)
T cd03259 28 FLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRGVP- 103 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcCCC-
Confidence 47999999999999999999999987 999999998875422 2456899999998898999999998864321100
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.. +.++.++++++.+||.+..++.+++ ||||||||++|||||
T Consensus 104 -------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrl~la~al 145 (213)
T cd03259 104 -------------------KA--------------EIRARVRELLELVGLEGLLNRYPHE-----LSGGQQQRVALARAL 145 (213)
T ss_pred -------------------HH--------------HHHHHHHHHHHHcCChhhhhcChhh-----CCHHHHHHHHHHHHH
Confidence 00 0012345678899998877776654 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
+.+|++++|||||+|||+.++..+++.|++++++.++|+|++.| ..+++.+.||++++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH-~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTH-DQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEec-CHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999987656889988755 456788899999999999998765
No 357
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-33 Score=274.70 Aligned_cols=190 Identities=25% Similarity=0.369 Sum_probs=162.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
.++++||||||||||||+++|.++|. .|+|.+||++++.... .-|.|+|++.++|-+||.||+.|+.++++..+.
T Consensus 33 ~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~ 107 (259)
T COG4525 33 LVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVIDNVAFGLQLRGIEKA 107 (259)
T ss_pred EEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCCc--cceeEeccCccchhhHHHHHHHHHHHhcCCCHH
Confidence 36899999999999999999999998 9999999998875433 348999999999999999999999998875321
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
. ...++++.+...||++..+..| -+|||||||||.|||||+
T Consensus 108 ~----------------------------------R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa 148 (259)
T COG4525 108 Q----------------------------------RREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALA 148 (259)
T ss_pred H----------------------------------HHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhh
Confidence 0 1234567889999988766555 469999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecC--CeEEEEcChhhHHH
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSE--GQIVYQGPRERVLE 235 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~--G~i~~~G~~~~~~~ 235 (1293)
.+|++|+||||+++||+-+++++.++|-++.+..|+.++++ +|...|+.-+++++++|+. |+|+..-++.-...
T Consensus 149 ~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lli-TH~ieEAlflatrLvvlsp~pgRvv~~~~~df~rR 224 (259)
T COG4525 149 VEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLI-THDIEEALFLATRLVVLSPGPGRVVERLPLDFARR 224 (259)
T ss_pred cCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEE-eccHHHHHhhhheeEEecCCCceeeEecCCCHHHH
Confidence 99999999999999999999999999999888889999885 5677888889999999974 89998777664433
No 358
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.6e-33 Score=357.51 Aligned_cols=209 Identities=28% Similarity=0.420 Sum_probs=173.4
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++++.+. +++.+|+|+|+++++||.+||+||||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEeH
Confidence 5899999987632 235699999999999999999999999999999999998764 479999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.+|||+|++.+++ .|++||+.++. ...++++ +.++++..++.+. .|+.+++.
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~~~----i~~al~~~~l~~~i~~lp~gl~t~i~e~- 612 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPDAD----LVRACKDAAIHDVITSRPGGYDAELAEG- 612 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCHHH----HHHHHHHhCCHHHHHhCcCcccceeccC-
Confidence 43 456788999999999885 59999997531 1223332 4566777666543 35666643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++|+||||||+||+.++..+.+.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~- 686 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER- 686 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 468999999999999999999999999999999999999999999976 4899999999964 5677999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 899999985
No 359
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.5e-33 Score=298.68 Aligned_cols=167 Identities=30% Similarity=0.488 Sum_probs=139.9
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQ 794 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 794 (1293)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|
T Consensus 10 ~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~--~~G~v~~~g~~~~~~~~~~~~~~i~~~~q------- 80 (180)
T cd03214 10 GGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKP--SSGEILLDGKDLASLSPKELARKIAYVPQ------- 80 (180)
T ss_pred CCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCcCCHHHHHHHHhHHHH-------
Confidence 345699999999999999999999999999999999998663 57999999987532 122344666666
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000773 795 VTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPT 874 (1293)
Q Consensus 795 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPt 874 (1293)
+++.+|+.+..++.+ +.||||||||++|||+|+.+|++++|||||
T Consensus 81 ------------------------------~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~ 125 (180)
T cd03214 81 ------------------------------ALELLGLAHLADRPF-----NELSGGERQRVLLARALAQEPPILLLDEPT 125 (180)
T ss_pred ------------------------------HHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 455667665555443 379999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 875 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 875 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
+|||+.++..+.+.|++++++ |+|+|+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 126 ~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~~~~l~~-g~i~~~~ 180 (180)
T cd03214 126 SHLDIAHQIELLELLRRLARERGKTVVMVLHDLN-LAARYADRVILLKD-GRIVAQG 180 (180)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999776 899999999975 56688999999985 8887643
No 360
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.4e-33 Score=348.47 Aligned_cols=194 Identities=29% Similarity=0.441 Sum_probs=160.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
.+||+|+||||||||+|+|+|+++|. +|+|.+||.++++.. .++.++||+|++.+|.. |++||+.++.....
T Consensus 501 ~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~g-SI~eNi~l~~p~~~- 575 (709)
T COG2274 501 KVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSG-SIRENIALGNPEAT- 575 (709)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhcC-cHHHHHhcCCCCCC-
Confidence 37999999999999999999999998 999999999987654 46889999999988866 99999988643211
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
.+ +..+++...+. .+ -..+++..+||.+| |.+.+||||||||++|||
T Consensus 576 ---~e---------------------~i~~A~~~ag~-----~~---fI~~lP~gy~t~v~-E~G~~LSGGQrQrlalAR 622 (709)
T COG2274 576 ---DE---------------------EIIEAAQLAGA-----HE---FIENLPMGYDTPVG-EGGANLSGGQRQRLALAR 622 (709)
T ss_pred ---HH---------------------HHHHHHHHhCc-----HH---HHHhcccccccccc-cCCCCCCHHHHHHHHHHH
Confidence 11 11122222111 11 12357888999999 477889999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEF 236 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~ 236 (1293)
||+++|+||+||||||+||+.+.+.+.+.|.++. .|+|+|++.|+++ ..+.||||+||++|+++++|+++|+.+.
T Consensus 623 aLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaHRl~--ti~~adrIiVl~~Gkiv~~gs~~ell~~ 697 (709)
T COG2274 623 ALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAHRLS--TIRSADRIIVLDQGKIVEQGSHEELLAQ 697 (709)
T ss_pred HhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEccch--HhhhccEEEEccCCceeccCCHHHHHHh
Confidence 9999999999999999999999999999999986 4689999888874 7889999999999999999999999863
No 361
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-33 Score=325.73 Aligned_cols=191 Identities=22% Similarity=0.331 Sum_probs=161.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-------cceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-------QKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.+++.+||+||+.++..
T Consensus 56 i~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~ 132 (400)
T PRK10070 56 IFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGME 132 (400)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999998764321 2469999999999999999999998765
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
..+... . +.+..++++++.+||.+..++.+. .|||||||||
T Consensus 133 ~~~~~~--------------------~--------------~~~~~~~e~L~~~gL~~~~~~~~~-----~LSgGq~QRv 173 (400)
T PRK10070 133 LAGINA--------------------E--------------ERREKALDALRQVGLENYAHSYPD-----ELSGGMRQRV 173 (400)
T ss_pred hcCCCH--------------------H--------------HHHHHHHHHHHHcCCChhhhcCcc-----cCCHHHHHHH
Confidence 322100 0 001235668999999887777665 4999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
+|||||+.+|+++||||||+|||+.++..+.+.|+++.++.++|+|+++| ..+++.+++|++++|++|+++..|+++++
T Consensus 174 ~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTH-d~~~~~~~~Dri~vL~~G~i~~~g~~~~l 252 (400)
T PRK10070 174 GLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISH-DLDEAMRIGDRIAIMQNGEVVQVGTPDEI 252 (400)
T ss_pred HHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEEC-CHHHHHHhCCEEEEEECCEEEecCCHHHH
Confidence 99999999999999999999999999999999999987666889998755 56788899999999999999999998876
Q ss_pred H
Q 000773 234 L 234 (1293)
Q Consensus 234 ~ 234 (1293)
.
T Consensus 253 ~ 253 (400)
T PRK10070 253 L 253 (400)
T ss_pred H
Confidence 4
No 362
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.2e-33 Score=357.34 Aligned_cols=210 Identities=22% Similarity=0.393 Sum_probs=173.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+ +++.+|+|+|+++++||.+||+||||||||||+++|+|..++ .+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEEH
Confidence 578999988753 134699999999999999999999999999999999998764 589999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
++ ..+++.+|||+|++.+++. |++||+.++.. ...++++ +.++++..++.+ -.|+.++. +
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~~~----i~~a~~~a~l~~~i~~lp~gldt~i~e-~ 608 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQDE----IWAACEIAEIKDDIENMPLGYQTELSE-E 608 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCHHH----HHHHHHHhCCHHHHHhcccccCcEecC-C
Confidence 43 4567889999999998865 99999986421 1223322 456666666543 24666664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++|+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 4679999999999999999999999999999999999999999999885 4799999999974 6688999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 899999985
No 363
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.6e-32 Score=296.58 Aligned_cols=179 Identities=21% Similarity=0.335 Sum_probs=137.9
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCC--CCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQND--IHSPQV 795 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~--~~~~~l 795 (1293)
+.++++++++|-|.-...+||+||||.||||||++|.|...+ ..|+..-| .+-.||+..|+. .+-..-
T Consensus 598 gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn--------hrL~iG~FdQh~~E~L~~Ee 667 (807)
T KOG0066|consen 598 GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN--------HRLRIGWFDQHANEALNGEE 667 (807)
T ss_pred CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc--------ceeeeechhhhhHHhhcccc
Confidence 567789999999999999999999999999999999998774 35654322 233578888863 344566
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000773 796 TVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTS 875 (1293)
Q Consensus 796 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPts 875 (1293)
|.-|.|.-.. +.+-++ +...+-.+||...++++- ++.||||||-||++|..-+..|+||||||||+
T Consensus 668 tp~EyLqr~F------Nlpyq~----ARK~LG~fGL~sHAHTik----ikdLSGGQKaRValaeLal~~PDvlILDEPTN 733 (807)
T KOG0066|consen 668 TPVEYLQRKF------NLPYQE----ARKQLGTFGLASHAHTIK----IKDLSGGQKARVALAELALGGPDVLILDEPTN 733 (807)
T ss_pred CHHHHHHHhc------CCChHH----HHHHhhhhhhhhccceEe----eeecCCcchHHHHHHHHhcCCCCEEEecCCCC
Confidence 7777664221 233333 456788999998888763 45799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 876 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 876 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
+||..+...+-+.|++. ...||+++||-+. +.+.-+.+.++.+.|
T Consensus 734 NLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~ 778 (807)
T KOG0066|consen 734 NLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQG 778 (807)
T ss_pred CcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCC
Confidence 99999999999888876 4589999998653 444445566665544
No 364
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.6e-33 Score=353.66 Aligned_cols=210 Identities=28% Similarity=0.414 Sum_probs=171.3
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+.. +++.+|+|+|++++|||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEEH
Confidence 58999999876421 134699999999999999999999999999999999998764 479999999986
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.++||+|++.+++ .|++||+.++. ...+++ .+.++++..++.+. .|+.+|+ +
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~~e----~i~~al~~a~l~~~i~~lp~GldT~ige-~ 614 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTPDE----EIMAAAKAANAHDFIMEFPNGYDTEVGE-K 614 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCCHH----HHHHHHHHcCCHHHHHhCCCccCCcccC-C
Confidence 53 346778999999999886 59999997642 122222 25667777776543 4566664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|+||+||||||+||+.++..+.+ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~- 688 (711)
T TIGR00958 615 GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK- 688 (711)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999988 22 235899999999964 6678999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 689 G~ive~Gt~ 697 (711)
T TIGR00958 689 GSVVEMGTH 697 (711)
T ss_pred CEEEEeeCH
Confidence 899999985
No 365
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-33 Score=308.24 Aligned_cols=195 Identities=27% Similarity=0.411 Sum_probs=158.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++........
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~ 106 (239)
T cd03296 30 LVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSE 106 (239)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccc
Confidence 47999999999999999999999887 999999998765432 23568999999998889999999988654221000
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
+. ... +....++.+++.+||++..++.+++ ||||||||++||+||
T Consensus 107 ~~----------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~la~al 151 (239)
T cd03296 107 RP----------------PEA--------------EIRAKVHELLKLVQLDWLADRYPAQ-----LSGGQRQRVALARAL 151 (239)
T ss_pred cC----------------CHH--------------HHHHHHHHHHHHcCChhhhhcChhh-----CCHHHHHHHHHHHHH
Confidence 00 000 0012345678999998777776654 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.+|++++|++|++++.|+++++.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~-~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 152 AVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHD-QEEALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 999999999999999999999999999999977558899997665 46788899999999999999999987763
No 366
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.2e-33 Score=343.47 Aligned_cols=197 Identities=18% Similarity=0.205 Sum_probs=164.3
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCC--
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIH-- 791 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~-- 791 (1293)
++++.+|+|+|+++++||+++|+||||||||||+|+|+|...+ .+|+|.++|.+... ...++.++|++|++..
T Consensus 13 ~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p--~~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (490)
T PRK10938 13 LSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPL--LSGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDM 90 (490)
T ss_pred cCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCceEEECCcccccCCHHHHHHHhceeccCcchhh
Confidence 3445699999999999999999999999999999999998653 47999998875432 2234568999998643
Q ss_pred C------CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 792 S------PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 792 ~------~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
+ ..+||+|++.+. .+..++++++++.+|+.+..++.++ .|||||||||+||+||+.+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p 154 (490)
T PRK10938 91 LSPGEDDTGRTTAEIIQDE-----------VKDPARCEQLAQQFGITALLDRRFK-----YLSTGETRKTLLCQALMSEP 154 (490)
T ss_pred cccchhhccccHHHhcccc-----------hhHHHHHHHHHHHcCCHhhhhCCcc-----cCCHHHHHHHHHHHHHHcCC
Confidence 1 147888876431 1122457889999999888887765 69999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 866 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|.+ |+++..|+.+
T Consensus 155 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 220 (490)
T PRK10938 155 DLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFD-EIPDFVQFAGVLAD-CTLAETGERE 220 (490)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHH-HHHhhCCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999999999877999999999975 57788999999985 8999988753
No 367
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-33 Score=312.38 Aligned_cols=191 Identities=24% Similarity=0.347 Sum_probs=159.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-------ccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-------PQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 52 ~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 128 (269)
T cd03294 52 IFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 128 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999987 899999998775421 13468999999999989999999988654
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
..+.. .. +....++++++.+||.+..++.+++ ||||||||+
T Consensus 129 ~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Gq~qrv 169 (269)
T cd03294 129 VQGVP--------------------RA--------------EREERAAEALELVGLEGWEHKYPDE-----LSGGMQQRV 169 (269)
T ss_pred hcCCC--------------------HH--------------HHHHHHHHHHHHcCCHhHhhCCccc-----CCHHHHHHH
Confidence 22100 00 0012345678999998877877764 999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
+||+||+.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.|+ .+++.+.+|++++|++|++++.|+++++
T Consensus 170 ~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~-~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 248 (269)
T cd03294 170 GLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHD-LDEALRLGDRIAIMKDGRLVQVGTPEEI 248 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999976568899987655 5678889999999999999999998876
Q ss_pred H
Q 000773 234 L 234 (1293)
Q Consensus 234 ~ 234 (1293)
.
T Consensus 249 ~ 249 (269)
T cd03294 249 L 249 (269)
T ss_pred H
Confidence 4
No 368
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.1e-32 Score=352.81 Aligned_cols=211 Identities=26% Similarity=0.450 Sum_probs=175.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++++.+. +++.+|+|+|++++|||.+||+||||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEh
Confidence 5899999987631 234699999999999999999999999999999999998764 579999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
++ ..+++.++||+|++.+++. |++||+.+.. ...++++ +.++++..++.+ -.|+.+|+.
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~-TI~eNi~~~~-----~~~~~~~----i~~a~~~~~l~~~i~~lp~gl~T~i~e~- 598 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYG-TLRDNIALGA-----PYADDEE----ILRAAELAGVTEFVRRHPDGLDMQIGER- 598 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhh-hHHHHHhCCC-----CCCCHHH----HHHHHHHcChHHHHHhCcccccceecCC-
Confidence 53 4567889999999998875 9999997631 1223332 456666666544 345666643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~- 674 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN- 674 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999886 4799999999974 6688999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 999999985
No 369
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-33 Score=323.28 Aligned_cols=192 Identities=30% Similarity=0.438 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc---cccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF---VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
.++|+|+||||||||+++|+|+.+|+ +|+|.+||.+..+. .++++++||+|+|.+++. |+|||+.++.....
T Consensus 349 ~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~~~~s- 423 (559)
T COG4988 349 LTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLARPDAS- 423 (559)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccCCcCC-
Confidence 37999999999999999999999987 99999999887654 467899999999998876 99999998643110
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
+.++.+..+. ..+.+.+.-++..||.+|+ .+++|||||+|||++||
T Consensus 424 ---------------------~e~i~~al~~------------a~l~~~v~~p~GLdt~ige-~G~~LSgGQ~QRlaLAR 469 (559)
T COG4988 424 ---------------------DEEIIAALDQ------------AGLLEFVPKPDGLDTVIGE-GGAGLSGGQAQRLALAR 469 (559)
T ss_pred ---------------------HHHHHHHHHH------------hcHHHhhcCCCcccchhcc-CCCCCCHHHHHHHHHHH
Confidence 0111111110 0112222224567899984 77889999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
||+.+++++++||||++||.++++.+.+.|.++++ ++|+++++|++ +....+|+|++|++|++++.|.++++.+
T Consensus 470 All~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itHrl--~~~~~~D~I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 470 ALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITHRL--EDAADADRIVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred HhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEcCh--HHHhcCCEEEEecCCceeccCCHHHHhh
Confidence 99999999999999999999999999999999986 58888887775 4667899999999999999999999854
No 370
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=313.62 Aligned_cols=192 Identities=28% Similarity=0.401 Sum_probs=157.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-----cccceEEeeccccc-cCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-----VPQKTSAYISQNDV-HVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++. .+...||+|++.|+...
T Consensus 35 ~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 111 (287)
T PRK13637 35 FVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPIN 111 (287)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHH
Confidence 47999999999999999999999988 99999999887642 22467899999863 33457999999886542
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc--cccCcccCCCcccccccccchh
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD--ICKDTIVGDEMNRGISGGQKKR 152 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~~t~vg~~~~~~LSGGqrqR 152 (1293)
.+.. .. +.+..++++++.+||+ +..|+.+. .||||||||
T Consensus 112 ~~~~--------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~~-----~LSgGq~qr 152 (287)
T PRK13637 112 LGLS--------------------EE--------------EIENRVKRAMNIVGLDYEDYKDKSPF-----ELSGGQKRR 152 (287)
T ss_pred CCCC--------------------HH--------------HHHHHHHHHHHHcCCCchhhccCCcc-----cCCHHHHHH
Confidence 2110 00 0112356789999997 55666654 599999999
Q ss_pred hHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhh
Q 000773 153 VTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRER 232 (1293)
Q Consensus 153 v~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~ 232 (1293)
++||+||+.+|++++|||||+|||+.++..+++.|++++++.|+|||+++|+ .+++.++||||++|++|++++.|++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd-~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHS-MEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999999977668999997554 567888999999999999999999988
Q ss_pred HHH
Q 000773 233 VLE 235 (1293)
Q Consensus 233 ~~~ 235 (1293)
+.+
T Consensus 232 ~~~ 234 (287)
T PRK13637 232 VFK 234 (287)
T ss_pred HHh
Confidence 743
No 371
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.7e-33 Score=317.03 Aligned_cols=191 Identities=28% Similarity=0.375 Sum_probs=159.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 32 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 108 (303)
T TIGR01288 32 CFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMS 108 (303)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999876432 12467999999999999999999998654322100
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
..+ .+..++.+++.+||++..++.+++ ||||||||++||+|
T Consensus 109 --------------------~~~--------------~~~~~~~ll~~~~l~~~~~~~~~~-----LSgG~~qrv~la~a 149 (303)
T TIGR01288 109 --------------------TRE--------------IEAVIPSLLEFARLESKADVRVAL-----LSGGMKRRLTLARA 149 (303)
T ss_pred --------------------HHH--------------HHHHHHHHHHHCCChhHhcCchhh-----CCHHHHHHHHHHHH
Confidence 000 011245678899999888887765 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|+.+|++++|||||+|||+.++..+++.|+++++ .|+|+|++.| ..+++.++||++++|++|++++.|+++++.+
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~sH-~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTH-FMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECC-CHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999976 5889998755 5568889999999999999999999988754
No 372
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.1e-33 Score=307.21 Aligned_cols=200 Identities=23% Similarity=0.315 Sum_probs=158.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc----cceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP----QKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++.....
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~ 104 (236)
T cd03219 28 IHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQART 104 (236)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhcc
Confidence 47999999999999999999999887 9999999988754321 3458999999999999999999988754221
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
....... ...... .+....++++++.+||++..++.++ .|||||||||+||
T Consensus 105 ~~~~~~~----------~~~~~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la 155 (236)
T cd03219 105 GSGLLLA----------RARREE--------------REARERAEELLERVGLADLADRPAG-----ELSYGQQRRLEIA 155 (236)
T ss_pred ccccccc----------cccccH--------------HHHHHHHHHHHHHcCccchhhCChh-----hCCHHHHHHHHHH
Confidence 0000000 000000 0012235678899999877777665 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||+.+|++++|||||+|||+.++..+++.|+++++ .++|+|++.|+ .+++.+.||++++|++|++++.|+++++.
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~-~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVEHD-MDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecC-HHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 999999999999999999999999999999999876 58899887554 56788899999999999999999987763
No 373
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.2e-32 Score=295.75 Aligned_cols=178 Identities=19% Similarity=0.246 Sum_probs=147.7
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKE 799 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e 799 (1293)
+.+++ +|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..... ++.++|++|++.+++.+||+|
T Consensus 14 ~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~-~~~~~~~~~~~~~~~~~tv~~ 89 (195)
T PRK13541 14 KNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQP--SSGNIYYKNCNINNIA-KPYCTYIGHNLGLKLEMTVFE 89 (195)
T ss_pred cEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCcccChhh-hhhEEeccCCcCCCccCCHHH
Confidence 34555 9999999999999999999999999999998663 5899999998764322 345899999988888999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000773 800 SLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDA 879 (1293)
Q Consensus 800 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~ 879 (1293)
|+.+..... . . .++++++++.+++.+..++.++ .||||||||++||+||+.+|++++|||||+|||+
T Consensus 90 ~l~~~~~~~---~--~---~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rl~la~al~~~p~~lllDEP~~~LD~ 156 (195)
T PRK13541 90 NLKFWSEIY---N--S---AETLYAAIHYFKLHDLLDEKCY-----SLSSGMQKIVAIARLIACQSDLWLLDEVETNLSK 156 (195)
T ss_pred HHHHHHHhc---c--c---HHHHHHHHHHcCCHhhhccChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 998754321 1 1 1246788899999877776544 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhH
Q 000773 880 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 916 (1293)
Q Consensus 880 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~ 916 (1293)
.++..+.+.|++..++|+|||+++|+++ ..+.+|-
T Consensus 157 ~~~~~l~~~l~~~~~~~~tiii~sh~~~--~i~~~~~ 191 (195)
T PRK13541 157 ENRDLLNNLIVMKANSGGIVLLSSHLES--SIKSAQI 191 (195)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeCCcc--ccchhhe
Confidence 9999999999877677999999999975 3344443
No 374
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-33 Score=322.39 Aligned_cols=186 Identities=25% Similarity=0.407 Sum_probs=159.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++||+|++.+++.+||+||+.|+.+
T Consensus 26 ~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 102 (352)
T PRK11144 26 ITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA 102 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHhhhh
Confidence 47999999999999999999999987 99999999876431 124679999999999999999999987532
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
.. .+..++++++.+||++..++.++ .|||||||||
T Consensus 103 ~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qRv 137 (352)
T PRK11144 103 KS----------------------------------------MVAQFDKIVALLGIEPLLDRYPG-----SLSGGEKQRV 137 (352)
T ss_pred hh----------------------------------------hHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHH
Confidence 00 01124567899999887777765 4999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|+++| ..+++..++|++++|++|+++..|+++++
T Consensus 138 alaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTH-d~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 138 AIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSH-SLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEec-CHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 99999999999999999999999999999999999998766889988755 45688999999999999999999999887
Q ss_pred HH
Q 000773 234 LE 235 (1293)
Q Consensus 234 ~~ 235 (1293)
..
T Consensus 217 ~~ 218 (352)
T PRK11144 217 WA 218 (352)
T ss_pred Hh
Confidence 53
No 375
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-33 Score=302.79 Aligned_cols=185 Identities=28% Similarity=0.376 Sum_probs=154.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. .++.++|++|++.+++.+||+||+.++....+...
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~- 105 (220)
T cd03293 32 FVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLDNVALGLELQGVPK- 105 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHHHHHHHHHHHcCCCH-
Confidence 47999999999999999999999887 9999999987753 34578999999988888999999988654321100
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
. .....++.+++.+||.+..++.++ .||||||||++||+||+
T Consensus 106 -------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al~ 147 (220)
T cd03293 106 -------------------A--------------EARERAEELLELVGLSGFENAYPH-----QLSGGMRQRVALARALA 147 (220)
T ss_pred -------------------H--------------HHHHHHHHHHHHcCChhhhhCCcc-----cCCHHHHHHHHHHHHHH
Confidence 0 001234668899999877777665 49999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEec--CCeEEEEcCh
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLS--EGQIVYQGPR 230 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~--~G~i~~~G~~ 230 (1293)
.+|++++|||||+|||+.++..+++.|+++.++.++|+|++.|+ ..++.+.+|++++|+ +|++++.++.
T Consensus 148 ~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 148 VDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHD-IDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred cCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecC-HHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 99999999999999999999999999999876568899987665 457888999999999 7999988765
No 376
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-33 Score=331.34 Aligned_cols=193 Identities=23% Similarity=0.446 Sum_probs=159.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc---cceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP---QKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
.||++||||+||||+.++|..++.|+ +|+|.+||.|+.+.+. ++.+|+|.|||.+|.. ||+|||.|+...-
T Consensus 496 ~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~~~-- 569 (716)
T KOG0058|consen 496 VVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLDNA-- 569 (716)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCCCC--
Confidence 48999999999999999999999998 9999999999887654 5789999999999976 9999999986511
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
+ +.++ ..++.+. ...+. ..++++.+||.||+ .+.+||||||||++|||
T Consensus 570 -t-------------------~e~i---~~AAk~A-----Nah~F---I~~~p~gY~T~VGE-kG~qLSGGQKQRIAIAR 617 (716)
T KOG0058|consen 570 -T-------------------DEEI---EAAAKMA-----NAHEF---ITNFPDGYNTVVGE-KGSQLSGGQKQRIAIAR 617 (716)
T ss_pred -C-------------------HHHH---HHHHHHh-----ChHHH---HHhCccccccccCC-ccccccchHHHHHHHHH
Confidence 0 0111 1111110 11112 23588999999995 55679999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
||+.||.||||||.||+||+++...+.+.|.++.+ ++|+|++.|+. ...+.+|+|+++++|++++.|+++|+++
T Consensus 618 ALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIAHRL--STV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 618 ALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIAHRL--STVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred HHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEehhh--hHhhhccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999999999999998865 58998876654 4778899999999999999999999875
No 377
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.5e-33 Score=343.87 Aligned_cols=212 Identities=29% Similarity=0.441 Sum_probs=171.2
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+. +++.+|+|+|++++|||.++|+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 316 ~i~~~~v~~~y~~-----------~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~i~~~g~~i 382 (544)
T TIGR01842 316 HLSVENVTIVPPG-----------GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPP--TSGSVRLDGADL 382 (544)
T ss_pred eEEEEEEEEEcCC-----------CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeh
Confidence 5889999886531 235699999999999999999999999999999999998763 479999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
.. ..+++.++||+|++.+++. |++||+.+.. ...++++ +.++++..++.+ -.|+.++. .
T Consensus 383 ~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~~----~~~~~~~~~~~~~i~~l~~gl~t~~~~-~ 451 (544)
T TIGR01842 383 KQWDRETFGKHIGYLPQDVELFPG-TVAENIARFG-----ENADPEK----IIEAAKLAGVHELILRLPDGYDTVIGP-G 451 (544)
T ss_pred hhCCHHHHhhheEEecCCcccccc-cHHHHHhccC-----CCCCHHH----HHHHHHHhChHHHHHhCccccccccCC-C
Confidence 43 3456789999999999876 9999997421 1123322 233444444332 22455553 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++.++|+|+|+++|+++ ..+.+|++++|++
T Consensus 452 g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~--~~~~~d~i~~l~~- 528 (544)
T TIGR01842 452 GATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPS--LLGCVDKILVLQD- 528 (544)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 4679999999999999999999999999999999999999999999998766899999999974 5678999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 529 G~i~~~g~~ 537 (544)
T TIGR01842 529 GRIARFGER 537 (544)
T ss_pred CEEEeeCCH
Confidence 899999985
No 378
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-33 Score=305.79 Aligned_cols=191 Identities=25% Similarity=0.340 Sum_probs=158.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~ 109 (233)
T cd03258 33 IFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEI 109 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999998875421 145689999999999999999999886542
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. ..+ ....++++++.+||++..++.+. .||||||||++
T Consensus 110 ~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 150 (233)
T cd03258 110 AGVP--------------------KAE--------------IEERVLELLELVGLEDKADAYPA-----QLSGGQKQRVG 150 (233)
T ss_pred cCCC--------------------HHH--------------HHHHHHHHHHHCCChhhhhcChh-----hCCHHHHHHHH
Confidence 2100 000 01134567899999887777664 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.+|++++|++|++++.|+.+++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~-~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHE-MEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999999877568899997665 46788899999999999999999887653
No 379
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6e-33 Score=289.67 Aligned_cols=202 Identities=26% Similarity=0.421 Sum_probs=170.7
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh--hcccceEEEEc-cCCCCCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCE-QNDIHSPQVT 796 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~-q~~~~~~~lT 796 (1293)
..+++||||+|++|++++++|||||||||+||+|+|...+ .+|.|.++|..+-. ..+-+.+++|+ |.-.+...+.
T Consensus 37 ~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~p--~~G~v~V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp 114 (325)
T COG4586 37 IEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLLP--TSGKVRVNGKDPFRRREEYLRSIGLVMGQKLQLWWDLP 114 (325)
T ss_pred hhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCcccc--CCCeEEecCcCcchhHHHHHHHHHHHhhhhheeeeech
Confidence 4589999999999999999999999999999999998763 58999999986532 23334566654 5556666777
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
+.|.+....... +.+.++-.++.+++.+.+++....+..+. .||-|||.|+.||.+|+++|++|||||||-|
T Consensus 115 ~~ds~~v~~~Iy---~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr-----~LSlGqRmraeLaaaLLh~p~VLfLDEpTvg 186 (325)
T COG4586 115 ALDSLEVLKLIY---EIPDDEFAERLDFLTEILDLEGFLKWPVR-----KLSLGQRMRAELAAALLHPPKVLFLDEPTVG 186 (325)
T ss_pred hhhhHHHHHHHH---hCCHHHHHHHHHHHHHHhcchhhhhhhhh-----hccchHHHHHHHHHHhcCCCcEEEecCCccC
Confidence 888776543332 45666667788999999999988777654 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 877 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
||..++..|.+.|++..++ +.||+.+||+.+ ++...||||++++. |+++|+|+.+
T Consensus 187 LDV~aq~~ir~Flke~n~~~~aTVllTTH~~~-di~~lc~rv~~I~~-Gqlv~dg~l~ 242 (325)
T COG4586 187 LDVNAQANIREFLKEYNEERQATVLLTTHIFD-DIATLCDRVLLIDQ-GQLVFDGTLA 242 (325)
T ss_pred cchhHHHHHHHHHHHHHHhhCceEEEEecchh-hHHHhhhheEEeeC-CcEeecccHH
Confidence 9999999999999998754 999999999987 79999999999985 9999999973
No 380
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1e-32 Score=315.75 Aligned_cols=190 Identities=25% Similarity=0.394 Sum_probs=160.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||.||+.+.+...+..
T Consensus 30 i~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~ 106 (301)
T TIGR03522 30 IVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMK 106 (301)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 99999999887542 22457999999999999999999999866543210
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
. . +....++++++.+||.+..|+.++. ||||||||++||+|
T Consensus 107 ~--------------------~--------------~~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrv~la~a 147 (301)
T TIGR03522 107 G--------------------Q--------------LLKQRVEEMIELVGLRPEQHKKIGQ-----LSKGYRQRVGLAQA 147 (301)
T ss_pred H--------------------H--------------HHHHHHHHHHHHCCCchHhcCchhh-----CCHHHHHHHHHHHH
Confidence 0 0 0012346689999999888887764 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|+.+|++++|||||+|||+.++..+++.|+++++ ++|||++. |..+++.++|||+++|++|++++.|+.+++.+
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiii~s-H~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--DKTIILST-HIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEc-CCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999853 68888875 55678999999999999999999999998765
No 381
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.3e-32 Score=321.32 Aligned_cols=190 Identities=27% Similarity=0.454 Sum_probs=160.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.|+..
T Consensus 25 i~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 101 (354)
T TIGR02142 25 VTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRYGMK 101 (354)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHHHhh
Confidence 47999999999999999999999987 99999999887432 124569999999999999999999998653
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
.... . +.+..++++++.+||.+..|+.+++ |||||||||
T Consensus 102 ~~~~-------~-----------------------------~~~~~~~~~l~~~gL~~~~~~~~~~-----LSgGqkqRv 140 (354)
T TIGR02142 102 RARP-------S-----------------------------ERRISFERVIELLGIGHLLGRLPGR-----LSGGEKQRV 140 (354)
T ss_pred ccCh-------h-----------------------------HHHHHHHHHHHHcCChhHhcCChhh-----CCHHHHHHH
Confidence 2100 0 0012346688999998888777654 999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
+|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|+++|+ .+++..++|++++|++|+++..|+++++
T Consensus 141 alAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~-~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 141 AIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHS-LQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 999999999999999999999999999999999999987668899887554 5688889999999999999999998887
Q ss_pred HH
Q 000773 234 LE 235 (1293)
Q Consensus 234 ~~ 235 (1293)
..
T Consensus 220 ~~ 221 (354)
T TIGR02142 220 WA 221 (354)
T ss_pred hc
Confidence 43
No 382
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-32 Score=306.06 Aligned_cols=199 Identities=26% Similarity=0.388 Sum_probs=158.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 105 (241)
T cd03256 29 FVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLG 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcc
Confidence 47999999999999999999999887 899999998875432 245689999999889989999999875421
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.. .... .. ...... .....++++++.+||.+..++.++ .|||||||||+
T Consensus 106 ~~--~~~~---~~------~~~~~~---------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 154 (241)
T cd03256 106 RR--STWR---SL------FGLFPK---------------EEKQRALAALERVGLLDKAYQRAD-----QLSGGQQQRVA 154 (241)
T ss_pred cc--hhhh---hh------cccCcH---------------HHHHHHHHHHHHcCChhhhCCCcc-----cCCHHHHHHHH
Confidence 10 0000 00 000000 011235667899999877776664 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||+||+.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.|+ .+++.+++|++++|++|++++.|+++++.
T Consensus 155 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~-~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 155 IARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQ-VDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999999876568899987555 56788899999999999999999988753
No 383
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-32 Score=298.82 Aligned_cols=198 Identities=24% Similarity=0.328 Sum_probs=156.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++.... ..+.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~-----------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 72 (207)
T cd03369 6 EIEVENLSVRYAP-----------DLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEA--EEGKIEIDGIDI 72 (207)
T ss_pred eEEEEEEEEEeCC-----------CCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEEh
Confidence 3677777765421 123699999999999999999999999999999999998663 479999999875
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
.. ...++.++|++|++.+++ .|++||+.+.. ....+ .+.+.++ + +. ....||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~~~l~~~~------~~~~~----~~~~~l~---~----~~-----~~~~LS~G 129 (207)
T cd03369 73 STIPLEDLRSSLTIIPQDPTLFS-GTIRSNLDPFD------EYSDE----EIYGALR---V----SE-----GGLNLSQG 129 (207)
T ss_pred HHCCHHHHHhhEEEEecCCcccC-ccHHHHhcccC------CCCHH----HHHHHhh---c----cC-----CCCcCCHH
Confidence 32 234567999999998876 59999996421 11211 1233333 2 22 23479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeC
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSG 930 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g 930 (1293)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +|+|+|++||+++ .+ ..+|++++|.+ |+++..|
T Consensus 130 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~th~~~-~~-~~~d~v~~l~~-g~i~~~g 205 (207)
T cd03369 130 QRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEF-TNSTILTIAHRLR-TI-IDYDKILVMDA-GEVKEYD 205 (207)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999999985 4899999999975 34 45899999985 8888877
Q ss_pred C
Q 000773 931 P 931 (1293)
Q Consensus 931 ~ 931 (1293)
+
T Consensus 206 ~ 206 (207)
T cd03369 206 H 206 (207)
T ss_pred C
Confidence 5
No 384
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=9.6e-31 Score=337.45 Aligned_cols=216 Identities=26% Similarity=0.388 Sum_probs=187.4
Q ss_pred ccccccccc-cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh----hcccceEEEEcc
Q 000773 713 QGVAEDKLR-LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ----ETFARISGYCEQ 787 (1293)
Q Consensus 713 ~~~~~~~~~-iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q 787 (1293)
+.+.++++. +++++|+.|++||+.|++|+|||||||++|+|+|..+ +.+|++.++|.+... ...++.+|||||
T Consensus 570 L~k~y~~~~~Av~~ls~~V~~gecfgLLG~NGAGKtT~f~mltG~~~--~t~G~a~i~g~~i~~~~~~~~~~~~iGyCPQ 647 (885)
T KOG0059|consen 570 LSKVYGGKDGAVRGLSFAVPPGECFGLLGVNGAGKTTTFKMLTGETK--PTSGEALIKGHDITVSTDFQQVRKQLGYCPQ 647 (885)
T ss_pred eeeeecchhhhhcceEEEecCCceEEEecCCCCCchhhHHHHhCCcc--CCcceEEEecCccccccchhhhhhhcccCCc
Confidence 333444444 9999999999999999999999999999999999876 458999999988643 225677999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000773 788 NDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSI 867 (1293)
Q Consensus 788 ~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~i 867 (1293)
+|.+.+.+|.||++.+.++++. .+..+..+.++.+++.+||.+.+|+.++ .+|||+|||+++|.||+.+|++
T Consensus 648 ~d~l~~~lT~rEhL~~~arlrG---~~~~di~~~v~~ll~~~~L~~~~~~~~~-----~ySgG~kRkLs~aialig~p~v 719 (885)
T KOG0059|consen 648 FDALWEELTGREHLEFYARLRG---LPRSDIGSAIEKLLRLVGLGPYANKQVR-----TYSGGNKRRLSFAIALIGDPSV 719 (885)
T ss_pred hhhhhhhccHHHHHHHHHHHcC---CChhHHHHHHHHHHHHcCChhhhccchh-----hCCCcchhhHHHHHHHhcCCCE
Confidence 9999999999999999998875 3445555668999999999999999876 6999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCCCChhHHHHHHH
Q 000773 868 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKVIEYYE 944 (1293)
Q Consensus 868 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~~~~~~~~~~~~ 944 (1293)
++|||||+|+||.+++.++++++++.++|+.||.|||..+ |...+|||+.+|.+ |+...-|++ +++...|.
T Consensus 720 i~LDEPstGmDP~arr~lW~ii~~~~k~g~aiiLTSHsMe-E~EaLCtR~aImv~-G~l~ciGs~----q~LKsrfG 790 (885)
T KOG0059|consen 720 ILLDEPSTGLDPKARRHLWDIIARLRKNGKAIILTSHSME-EAEALCTRTAIMVI-GQLRCIGSP----QELKSRYG 790 (885)
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHHhhhhheeec-CeeEEecCh----HHHHhhcC
Confidence 9999999999999999999999999988889999999864 56678999999986 899999986 44555553
No 385
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.4e-32 Score=318.90 Aligned_cols=191 Identities=24% Similarity=0.334 Sum_probs=160.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCc----ccCCcc-------ccceEEeeccccccCCCCCHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGY----RLNEFV-------PQKTSAYISQNDVHVGEMTVKETLD 69 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~----~~~~~~-------~~~~~~yv~Q~~~~~~~lTV~e~l~ 69 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|. ++.... .++.++||+|++.+++.+||+||+.
T Consensus 52 i~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~ 128 (382)
T TIGR03415 52 ICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVA 128 (382)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHH
Confidence 47999999999999999999999987 999999996 332211 1246999999999999999999999
Q ss_pred HHhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCccccccccc
Q 000773 70 FSARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQ 149 (1293)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1293)
++....+... . +.+..++++++.+||++..|+.+++ |||||
T Consensus 129 ~~~~~~g~~~--------------------~--------------~~~~~a~e~le~vgL~~~~~~~~~~-----LSgGq 169 (382)
T TIGR03415 129 FGLEMQGMPE--------------------A--------------ERRKRVDEQLELVGLAQWADKKPGE-----LSGGM 169 (382)
T ss_pred HHHHhcCCCH--------------------H--------------HHHHHHHHHHHHcCCchhhcCChhh-----CCHHH
Confidence 8864322100 0 0112356689999998887777654 99999
Q ss_pred chhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcC
Q 000773 150 KKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGP 229 (1293)
Q Consensus 150 rqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~ 229 (1293)
||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.++.++|+|+++| ..+++.+++|||++|++|+++..|+
T Consensus 170 ~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTH-dl~e~~~l~DrI~vl~~G~iv~~g~ 248 (382)
T TIGR03415 170 QQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSH-DLDEALKIGNRIAIMEGGRIIQHGT 248 (382)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999999999999997766899999754 5678899999999999999999999
Q ss_pred hhhHH
Q 000773 230 RERVL 234 (1293)
Q Consensus 230 ~~~~~ 234 (1293)
++++.
T Consensus 249 ~~ei~ 253 (382)
T TIGR03415 249 PEEIV 253 (382)
T ss_pred HHHHh
Confidence 98875
No 386
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.7e-32 Score=303.79 Aligned_cols=189 Identities=22% Similarity=0.375 Sum_probs=156.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (232)
T cd03218 28 IVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG 104 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC
Confidence 47999999999999999999999987 999999998765432 12468999999999999999999987643211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
.. .. +....++.+++.+||++..++.++ .||||||||++||
T Consensus 105 ~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la 145 (232)
T cd03218 105 LS--------------------KK--------------EREEKLEELLEEFHITHLRKSKAS-----SLSGGERRRVEIA 145 (232)
T ss_pred CC--------------------HH--------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHH
Confidence 00 00 001234667889999887777665 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
+||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|+ .+++.+.+|++++|++|++++.|+.+++
T Consensus 146 ~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH~-~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 146 RALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITDHN-VRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999999999999999875 57898887554 5688999999999999999999988765
No 387
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.8e-33 Score=312.96 Aligned_cols=210 Identities=22% Similarity=0.332 Sum_probs=162.2
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+. .++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~i~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 85 (257)
T cd03288 19 EIKIHDLCVRYEN-----------NLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVD--IFDGKIVIDGIDI 85 (257)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccC--CCCCeEEECCEEh
Confidence 4678888765421 12469999999999999999999999999999999999865 3579999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAI-------VGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-------~~~~~ 843 (1293)
.. ...++.++|++|++.+++ .|++||+.... ..... .+.++++..++.+..+.. .+ ..
T Consensus 86 ~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~------~~~~~----~~~~~l~~~~l~~~~~~~~~~l~~~~~-~~ 153 (257)
T cd03288 86 SKLPLHTLRSRLSIILQDPILFS-GSIRFNLDPEC------KCTDD----RLWEALEIAQLKNMVKSLPGGLDAVVT-EG 153 (257)
T ss_pred hhCCHHHHhhhEEEECCCCcccc-cHHHHhcCcCC------CCCHH----HHHHHHHHhCcHHHHhhcccccCcEec-cC
Confidence 43 234567999999998876 59999885310 11111 123344444443322221 11 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.++++. +++|||+++|+++ .+ ..+|++++|.+
T Consensus 154 ~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~-~~~dri~~l~~- 229 (257)
T cd03288 154 GENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAF-ADRTVVTIAHRVS-TI-LDADLVLVLSR- 229 (257)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhc-CCCEEEEEecChH-HH-HhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 4899999999976 34 45999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 230 G~i~~~g~~ 238 (257)
T cd03288 230 GILVECDTP 238 (257)
T ss_pred CEEEEeCCH
Confidence 899998875
No 388
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-32 Score=299.59 Aligned_cols=185 Identities=27% Similarity=0.365 Sum_probs=153.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+..
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~- 103 (213)
T cd03301 28 FVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKVP- 103 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHHHHHHHHHHhcCCC-
Confidence 47899999999999999999999887 999999998875432 2356999999998888899999998864322100
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.. +.++.++++++.+||.+..++.+++ ||||||||++|||||
T Consensus 104 -------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr~~laral 145 (213)
T cd03301 104 -------------------KD--------------EIDERVREVAELLQIEHLLDRKPKQ-----LSGGQRQRVALGRAI 145 (213)
T ss_pred -------------------HH--------------HHHHHHHHHHHHcCCHHHHhCChhh-----CCHHHHHHHHHHHHH
Confidence 00 0112346678899998877777754 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++.+.+|++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~-~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHD-QVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999987568899997665 46788899999999999999876
No 389
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2.9e-32 Score=284.19 Aligned_cols=152 Identities=30% Similarity=0.396 Sum_probs=134.0
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKE 799 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e 799 (1293)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|. +.++|++|++.++ ..|++|
T Consensus 14 ~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~~~--------~~i~~~~q~~~~~-~~tv~~ 82 (166)
T cd03223 14 RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPW--GSGRIGMPEG--------EDLLFLPQRPYLP-LGTLRE 82 (166)
T ss_pred CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCC--------ceEEEECCCCccc-cccHHH
Confidence 4699999999999999999999999999999999998663 4799999873 4689999998764 679999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000773 800 SLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDA 879 (1293)
Q Consensus 800 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~ 879 (1293)
|+.+. . ...||||||||++|||||+.+|++++|||||+|||+
T Consensus 83 nl~~~---------------------------------~-----~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~ 124 (166)
T cd03223 83 QLIYP---------------------------------W-----DDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166)
T ss_pred Hhhcc---------------------------------C-----CCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCH
Confidence 98642 0 136999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 880 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 880 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
.++..+.+.|+++ ++|+|++||+++ ....+|++++|+++|.
T Consensus 125 ~~~~~l~~~l~~~---~~tiiivsh~~~--~~~~~d~i~~l~~~~~ 165 (166)
T cd03223 125 ESEDRLYQLLKEL---GITVISVGHRPS--LWKFHDRVLDLDGEGG 165 (166)
T ss_pred HHHHHHHHHHHHh---CCEEEEEeCChh--HHhhCCEEEEEcCCCC
Confidence 9999999999876 689999999975 4578999999988763
No 390
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=9.2e-33 Score=302.26 Aligned_cols=180 Identities=23% Similarity=0.365 Sum_probs=148.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~ 107 (216)
T TIGR00960 31 MVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRI 107 (216)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHh
Confidence 47999999999999999999999987 999999998765321 235689999999999999999999887543
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. .. +.+..++++++.+||++..++.++ .|||||||||+
T Consensus 108 ~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~ 148 (216)
T TIGR00960 108 IGVP--------------------PR--------------DANERVSAALEKVGLEGKAHALPM-----QLSGGEQQRVA 148 (216)
T ss_pred cCCC--------------------HH--------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHH
Confidence 2110 00 001234667899999887777665 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQI 224 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i 224 (1293)
|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.| ..+++.+.||++++|++|++
T Consensus 149 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH-~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 149 IARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RGTTVLVATH-DINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-CHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999865 4789888755 45678889999999999974
No 391
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=2.1e-32 Score=315.82 Aligned_cols=184 Identities=28% Similarity=0.406 Sum_probs=157.6
Q ss_pred EECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHH
Q 000773 738 LMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKE 816 (1293)
Q Consensus 738 i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~ 816 (1293)
|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+||+||+.|....+ ....+
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p--~~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~---~~~~~ 75 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQP--DSGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMR---KVPRA 75 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCC--CceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhc---CCCHH
Confidence 6899999999999999998763 58999999987643 223567999999999999999999999875432 12334
Q ss_pred HHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-
Q 000773 817 DKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT- 895 (1293)
Q Consensus 817 ~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~- 895 (1293)
+..++++++++.+++.+..++.+. +|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++
T Consensus 76 ~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~ 150 (325)
T TIGR01187 76 EIKPRVLEALRLVQLEEFADRKPH-----QLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKTIQEQL 150 (325)
T ss_pred HHHHHHHHHHHHcCCcchhcCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc
Confidence 444568899999999988887654 79999999999999999999999999999999999999999999998765
Q ss_pred CCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 896 GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 896 g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
|+|||++||+++ ++...+|++++|.+ |+++..|+++
T Consensus 151 g~tiiivTHd~~-e~~~~~d~i~vl~~-G~i~~~g~~~ 186 (325)
T TIGR01187 151 GITFVFVTHDQE-EAMTMSDRIAIMRK-GKIAQIGTPE 186 (325)
T ss_pred CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 899999999975 67788999999985 8999998864
No 392
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=1.5e-32 Score=316.88 Aligned_cols=188 Identities=28% Similarity=0.348 Sum_probs=158.9
Q ss_pred EeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCcchh
Q 000773 4 LLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTRYE 82 (1293)
Q Consensus 4 ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~~~ 82 (1293)
|+|||||||||||++|+|+.+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.|+.+..+..
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~---~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~---- 73 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPD---SGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKVP---- 73 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCCC----
Confidence 68999999999999999999988 999999998875432 2457999999999999999999999875432110
Q ss_pred hhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHhcC
Q 000773 83 LLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIVGP 162 (1293)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~~~ 162 (1293)
.. +.+..++++++.+||++..++.+. .|||||||||+|||||+.+
T Consensus 74 ----------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qRvalaraL~~~ 118 (325)
T TIGR01187 74 ----------------RA--------------EIKPRVLEALRLVQLEEFADRKPH-----QLSGGQQQRVALARALVFK 118 (325)
T ss_pred ----------------HH--------------HHHHHHHHHHHHcCCcchhcCChh-----hCCHHHHHHHHHHHHHHhC
Confidence 00 001235668899999887777664 5999999999999999999
Q ss_pred CcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 163 TKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 163 p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|++++|||||+|||+.++..+.+.|+++.++.++|+|+++| ...++..++|++++|++|+++..|+++++.
T Consensus 119 p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tiiivTH-d~~e~~~~~d~i~vl~~G~i~~~g~~~~~~ 189 (325)
T TIGR01187 119 PKILLLDEPLSALDKKLRDQMQLELKTIQEQLGITFVFVTH-DQEEAMTMSDRIAIMRKGKIAQIGTPEEIY 189 (325)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999998766899999755 456888999999999999999999998874
No 393
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1e-32 Score=322.80 Aligned_cols=194 Identities=23% Similarity=0.407 Sum_probs=161.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||||+|+|+++|+ +|+|.++|.++.... .++.++||+|++.+++.+||+|++.++.....
T Consensus 31 iv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~- 106 (402)
T PRK09536 31 LVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHR- 106 (402)
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhc-
Confidence 47999999999999999999999987 999999998876432 34679999999998889999999988642110
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
..+. .+.. +.++.+++.++.+||.+..++.+.+ ||||||||++|||
T Consensus 107 -~~~~-------------~~~~---------------~~~~~v~~~le~vgl~~~~~~~~~~-----LSgGerQRv~IAr 152 (402)
T PRK09536 107 -SRFD-------------TWTE---------------TDRAAVERAMERTGVAQFADRPVTS-----LSGGERQRVLLAR 152 (402)
T ss_pred -cccc-------------CCCH---------------HHHHHHHHHHHHcCCchhhcCChhh-----CCHHHHHHHHHHH
Confidence 0000 0000 0123467789999999888877754 9999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||+++|++++|||||+|||+.++.++++.|+++++ .++|+|+++ |..+++.++|||+++|++|++++.|+++++.
T Consensus 153 AL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIivs-Hdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 153 ALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAAI-HDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEE-CCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999986 588999875 5567899999999999999999999998864
No 394
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-32 Score=299.19 Aligned_cols=183 Identities=24% Similarity=0.362 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. ..++.++|++|++.+++.+||+||+.+.....+...
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~- 102 (210)
T cd03269 28 IFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLKK- 102 (210)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCCh-
Confidence 47999999999999999999999887 9999999987654 234578999999998999999999987654321100
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
. +.++.++++++.+||++..++.++ .||||||||++||+|++
T Consensus 103 -------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~ 144 (210)
T cd03269 103 -------------------E--------------EARRRIDEWLERLELSEYANKRVE-----ELSKGNQQKVQFIAAVI 144 (210)
T ss_pred -------------------H--------------HHHHHHHHHHHHcCChHHHhCcHh-----hCCHHHHHHHHHHHHHh
Confidence 0 011234667899999877777665 49999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
.+|++++|||||+|||+.++..+.+.|+++++ +++|+|++.| ..+++.+.+|++++|++|++++.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH-~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDVIRELAR-AGKTVILSTH-QMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEECC-CHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 4788888755 556788899999999999998764
No 395
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.7e-32 Score=285.00 Aligned_cols=148 Identities=28% Similarity=0.447 Sum_probs=129.6
Q ss_pred cccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChh----cccceEEEEccCCCCCC
Q 000773 718 DKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQE----TFARISGYCEQNDIHSP 793 (1293)
Q Consensus 718 ~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~~ 793 (1293)
+++++++++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|
T Consensus 11 ~~~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q------ 82 (163)
T cd03216 11 GGVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKP--DSGEILVDGKEVSFASPRDARRAGIAMVYQ------ 82 (163)
T ss_pred CCeEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEECCcCCHHHHHhcCeEEEEe------
Confidence 345699999999999999999999999999999999998763 579999999875421 12345777776
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 794 QVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 794 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
||||||||++|||||+.+|++++||||
T Consensus 83 -----------------------------------------------------LS~G~~qrl~laral~~~p~illlDEP 109 (163)
T cd03216 83 -----------------------------------------------------LSVGERQMVEIARALARNARLLILDEP 109 (163)
T ss_pred -----------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEE
Q 000773 874 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIY 928 (1293)
Q Consensus 874 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~ 928 (1293)
|+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 110 ~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~~~~l~~-g~i~~ 162 (163)
T cd03216 110 TAALTPAEVERLFKVIRRLRAQGVAVIFISHRLD-EVFEIADRVTVLRD-GRVVG 162 (163)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEe
Confidence 9999999999999999999877999999999964 46678999999975 88764
No 396
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2e-32 Score=297.67 Aligned_cols=180 Identities=25% Similarity=0.378 Sum_probs=150.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-cccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.......
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~-- 102 (208)
T cd03268 28 IYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARENLRLLARLLGI-- 102 (208)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcCC--
Confidence 47999999999999999999999887 99999999876532 2245689999999889999999999876432110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.+..++.+++.+||.+..++.+++ |||||||||+||+|+
T Consensus 103 ------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~la~al 141 (208)
T cd03268 103 ------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG-----FSLGMKQRLGIALAL 141 (208)
T ss_pred ------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----CCHHHHHHHHHHHHH
Confidence 011245578889998777776654 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
+.+|++++|||||+|||+.++..+.+.|+++++ +++|+|++.| ..+++.+.+|++++|++|++++.|
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH-~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 142 LGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISSH-LLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEcC-CHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999876 5889888755 456788899999999999998765
No 397
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-32 Score=304.13 Aligned_cols=191 Identities=27% Similarity=0.379 Sum_probs=157.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+.
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 105 (242)
T cd03295 29 FLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKW 105 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999987 899999998765422 245689999999999999999999876432210
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCcc--ccCcccCCCcccccccccchhhHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDI--CKDTIVGDEMNRGISGGQKKRVTT 155 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~~t~vg~~~~~~LSGGqrqRv~i 155 (1293)
. .. +....+.++++.+||++ ..++.+ ..|||||||||+|
T Consensus 106 ~--------------------~~--------------~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G~~qrv~l 146 (242)
T cd03295 106 P--------------------KE--------------KIRERADELLALVGLDPAEFADRYP-----HELSGGQQQRVGV 146 (242)
T ss_pred C--------------------HH--------------HHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHHHHHHHHH
Confidence 0 00 00123456789999985 555555 4599999999999
Q ss_pred HHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 156 GEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 156 a~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|++ +++.+.+|++++|++|++++.|+++++.
T Consensus 147 aral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~-~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 147 ARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDI-DEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999999999765588999876654 5788899999999999999999887763
No 398
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.4e-32 Score=301.38 Aligned_cols=180 Identities=25% Similarity=0.371 Sum_probs=148.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-------ccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-------PQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~ 108 (218)
T cd03255 32 FVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLL 108 (218)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHh
Confidence 47999999999999999999999987 999999998875432 13568999999999999999999998754
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
..+... . +.+..++++++.+||++..++.++ .||||||||+
T Consensus 109 ~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 149 (218)
T cd03255 109 LAGVPK--------------------K--------------ERRERAEELLERVGLGDRLNHYPS-----ELSGGQQQRV 149 (218)
T ss_pred hcCCCH--------------------H--------------HHHHHHHHHHHHcCCchhhhcChh-----hcCHHHHHHH
Confidence 321100 0 001234667899999877777665 4999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQI 224 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i 224 (1293)
+|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|++ +++. .||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDP-ELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCH-HHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999999999999999765588999986665 4555 8999999999974
No 399
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5.1e-32 Score=340.41 Aligned_cols=210 Identities=26% Similarity=0.397 Sum_probs=172.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+. ++.+|+|+|++++|||+++|+|+||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 334 ~I~~~~vsf~y~~------------~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p--~~G~I~i~g~~i 399 (588)
T PRK13657 334 AVEFDDVSFSYDN------------SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDP--QSGRILIDGTDI 399 (588)
T ss_pred eEEEEEEEEEeCC------------CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEEh
Confidence 5889999887631 23599999999999999999999999999999999998764 589999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
.+ ..+++.++|++|++.+++ .|++||+.++. .+.++++ +.++++..++.+. .|+.++. +
T Consensus 400 ~~~~~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~-----~~~~d~~----i~~al~~~~l~~~i~~lp~gldt~i~~-~ 468 (588)
T PRK13657 400 RTVTRASLRRNIAVVFQDAGLFN-RSIEDNIRVGR-----PDATDEE----MRAAAERAQAHDFIERKPDGYDTVVGE-R 468 (588)
T ss_pred hhCCHHHHHhheEEEecCccccc-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhCHHHHHHhCcccccchhcC-C
Confidence 53 456778999999999886 59999997641 1223332 4556666665442 3555554 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
.+.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. +++|+|++||++ +..+.+|++++|++
T Consensus 469 g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~--~~~~~~D~ii~l~~- 544 (588)
T PRK13657 469 GRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRL--STVRNADRILVFDN- 544 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecH--HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 479999999996 46788999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 545 G~i~~~g~~ 553 (588)
T PRK13657 545 GRVVESGSF 553 (588)
T ss_pred CEEEEeCCH
Confidence 899998885
No 400
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-32 Score=297.16 Aligned_cols=177 Identities=23% Similarity=0.385 Sum_probs=140.3
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVKES 800 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~ 800 (1293)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++| .++|++|++.++ ..|++||
T Consensus 19 ~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~--~~~G~i~~~g----------~i~~~~q~~~l~-~~t~~en 85 (204)
T cd03250 19 FTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELE--KLSGSVSVPG----------SIAYVSQEPWIQ-NGTIREN 85 (204)
T ss_pred ceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCCeEEEcC----------EEEEEecCchhc-cCcHHHH
Confidence 69999999999999999999999999999999999866 3579999998 489999999887 5699999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000773 801 LIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDA-------IVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEP 873 (1293)
Q Consensus 801 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEP 873 (1293)
+.+... ...+ ...+.++.+++.+..+. ... .....||+|||||++|||+|+.+|++++||||
T Consensus 86 l~~~~~------~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~lS~G~~qrv~laral~~~p~llllDEP 154 (204)
T cd03250 86 ILFGKP------FDEE----RYEKVIKACALEPDLEILPDGDLTEIG-EKGINLSGGQKQRISLARAVYSDADIYLLDDP 154 (204)
T ss_pred hccCCC------cCHH----HHHHHHHHcCcHHHHHhccCcccceec-CCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 976321 1111 12334444444322211 111 12457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHH-HHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 874 TSGLDARAAAIVMR-TVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 874 tsgLD~~~~~~i~~-~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
|+|||+.++..+.+ +++++.++|+|||+++|+++ .+. .+|++++|.+ |
T Consensus 155 ~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~-~~~-~~d~i~~l~~-G 203 (204)
T cd03250 155 LSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQ-LLP-HADQIVVLDN-G 203 (204)
T ss_pred cccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHH-HHh-hCCEEEEEeC-C
Confidence 99999999999988 56766666899999999975 344 4999999975 5
No 401
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.5e-32 Score=308.25 Aligned_cols=192 Identities=22% Similarity=0.356 Sum_probs=158.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||.||+.++...
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~ 111 (269)
T PRK11831 35 ITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLRE 111 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHH
Confidence 47999999999999999999999987 999999998775321 235689999999999999999999876431
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
... . +..+ .+..++.+++.+||.+..++.+++ ||||||||++
T Consensus 112 ~~~---~----------------~~~~--------------~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~ 153 (269)
T PRK11831 112 HTQ---L----------------PAPL--------------LHSTVMMKLEAVGLRGAAKLMPSE-----LSGGMARRAA 153 (269)
T ss_pred ccC---C----------------CHHH--------------HHHHHHHHHHHcCChhhhhCChhh-----CCHHHHHHHH
Confidence 100 0 0000 012245678899998877777754 9999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||+||+.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.| ..+++.+.+|++++|++|++++.|+++++.
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH-~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSH-DVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEec-CHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999987655889998755 456788899999999999999999988764
No 402
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=310.49 Aligned_cols=190 Identities=22% Similarity=0.319 Sum_probs=156.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeecccc--ccCCCCCHHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQND--VHVGEMTVKETLDFS 71 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~lTV~e~l~f~ 71 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.++||+|++ .++ ..||+||+.|+
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~ 110 (290)
T PRK13634 35 YVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFG 110 (290)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHH
Confidence 47999999999999999999999987 99999999987421 1235689999986 344 56999999987
Q ss_pred hhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccc
Q 000773 72 ARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1293)
....+.. .. +.++.++++++.+||. +..++.+. .||||||
T Consensus 111 ~~~~~~~--------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~-----~LSgGq~ 151 (290)
T PRK13634 111 PMNFGVS--------------------EE--------------DAKQKAREMIELVGLPEELLARSPF-----ELSGGQM 151 (290)
T ss_pred HHHcCCC--------------------HH--------------HHHHHHHHHHHHCCCChhhhhCCcc-----cCCHHHH
Confidence 5422110 00 0112356789999997 55676664 4999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
|||+|||||+.+|++++|||||+|||+.++..+++.|++++++.|.|||+++| ..+++.+.+|||++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitH-d~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTH-SMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999997766889999755 55688899999999999999999998
Q ss_pred hhHH
Q 000773 231 ERVL 234 (1293)
Q Consensus 231 ~~~~ 234 (1293)
+++.
T Consensus 231 ~~~~ 234 (290)
T PRK13634 231 REIF 234 (290)
T ss_pred HHHh
Confidence 8764
No 403
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-32 Score=311.25 Aligned_cols=202 Identities=24% Similarity=0.371 Sum_probs=160.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeecccc--ccCCCCCHHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQND--VHVGEMTVKETLDFS 71 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~lTV~e~l~f~ 71 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+++.. ..++.++||+|++ .+++ .||.|++.|+
T Consensus 34 ~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~ 109 (288)
T PRK13643 34 YTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFG 109 (288)
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhH
Confidence 47999999999999999999999988 99999999987421 1245789999986 4554 6999999987
Q ss_pred hhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccc
Q 000773 72 ARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1293)
....+.. .. +.+..+.++++.+||. +..++.+ +.||||||
T Consensus 110 ~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~L~~~~~~~~~-----~~LSgGqk 150 (288)
T PRK13643 110 PQNFGIP--------------------KE--------------KAEKIAAEKLEMVGLADEFWEKSP-----FELSGGQM 150 (288)
T ss_pred HHHcCCC--------------------HH--------------HHHHHHHHHHHHcCCChhhccCCc-----ccCCHHHH
Confidence 6432110 00 0112356678899996 4556555 45999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ .|+|||+++|+ .+++.++||||++|++|++++.|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~vtHd-~~~~~~~~dri~~l~~G~i~~~g~~ 228 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SGQTVVLVTHL-MDDVADYADYVYLLEKGHIISCGTP 228 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEecC-HHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999875 58899997554 5678889999999999999999999
Q ss_pred hhHHH---HHHhCCCCCCCC
Q 000773 231 ERVLE---FFESCGFCCPER 247 (1293)
Q Consensus 231 ~~~~~---~f~~~G~~~~~~ 247 (1293)
+++.+ .+...|+.+|..
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~ 248 (288)
T PRK13643 229 SDVFQEVDFLKAHELGVPKA 248 (288)
T ss_pred HHHHcCHHHHHHcCCCCChH
Confidence 88743 234456655543
No 404
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.8e-32 Score=305.79 Aligned_cols=198 Identities=24% Similarity=0.341 Sum_probs=156.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 106 (243)
T TIGR02315 30 FVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLG 106 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccc
Confidence 47999999999999999999999887 999999998765321 245689999999899999999999875321
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.. .... .. . ...+. +.+..++++++.+||.+..++.+. .|||||||||+
T Consensus 107 ~~--~~~~---~~---~---~~~~~---------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~ 155 (243)
T TIGR02315 107 YK--PTWR---SL---L---GRFSE---------------EDKERALSALERVGLADKAYQRAD-----QLSGGQQQRVA 155 (243)
T ss_pred cc--cchh---hh---h---ccccH---------------HHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHH
Confidence 00 0000 00 0 00000 012235667899999877776664 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|+++|+ .+++.++||++++|++|++++.|+++++
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~-~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQ-VDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999999999876568898887555 5678889999999999999999988765
No 405
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.5e-32 Score=300.41 Aligned_cols=188 Identities=23% Similarity=0.400 Sum_probs=153.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++.....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~ 104 (222)
T cd03224 28 IVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR 104 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC
Confidence 47999999999999999999999987 999999998775432 13468999999999999999999988653211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHh-CCccccCcccCCCcccccccccchhhHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKIL-GLDICKDTIVGDEMNRGISGGQKKRVTT 155 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1293)
. .. .+..++.+++.+ ++++..++.++ .||||||||++|
T Consensus 105 ~-------~~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~~-----~LS~G~~qrv~l 143 (222)
T cd03224 105 R-------AK-----------------------------RKARLERVYELFPRLKERRKQLAG-----TLSGGEQQMLAI 143 (222)
T ss_pred c-------hh-----------------------------HHHHHHHHHHHHHhhhhhhhCchh-----hCCHHHHHHHHH
Confidence 0 00 011123456666 46666666654 499999999999
Q ss_pred HHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 156 GEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 156 a~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||||+.+|++++|||||+|||+.++..+++.|+++++ .++|+|++.|+ ..++.+.+|++++|++|++++.|+.+++.
T Consensus 144 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 144 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVEQN-ARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999999999999999876 57899987554 56788999999999999999999887653
No 406
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.98 E-value=1.6e-32 Score=276.28 Aligned_cols=193 Identities=30% Similarity=0.446 Sum_probs=158.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcccc---ceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQ---KTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~---~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
|++|+||||||||||||+|+|.+.|+ +|++.+||.+++..... +..+..||+..+-...||+|.+.+|..-...
T Consensus 29 v~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~ 105 (259)
T COG4559 29 VLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS 105 (259)
T ss_pred EEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc
Confidence 57999999999999999999999988 99999999998765432 4568999998877777999999998653321
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
+. .++ +..++.++.|...++.+.+.+.+ ..|||||||||.+||
T Consensus 106 g~-----------------~~~---------------e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEqQRVqlAR 148 (259)
T COG4559 106 GR-----------------EPE---------------EDERIAAQALAATDLSGLAGRDY-----RTLSGGEQQRVQLAR 148 (259)
T ss_pred CC-----------------Cch---------------hhHHHHHHHHHHcChhhhhccch-----hhcCchHHHHHHHHH
Confidence 11 010 12234566788888877766655 459999999999999
Q ss_pred HHhc------CCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 158 MIVG------PTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 158 al~~------~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
.|++ ++++|+||||||+||...+..+++..++++++ |..|+++ .|+.+.+..+||||++|++||++..|+++
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g~~V~~V-LHDLNLAA~YaDrivll~~Grv~a~g~p~ 226 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-GGAVLAV-LHDLNLAAQYADRIVLLHQGRVIASGSPQ 226 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-CCcEEEE-EccchHHHHhhheeeeeeCCeEeecCCHH
Confidence 9986 34589999999999999999999999999985 5677775 56778899999999999999999999999
Q ss_pred hHHH
Q 000773 232 RVLE 235 (1293)
Q Consensus 232 ~~~~ 235 (1293)
+++.
T Consensus 227 ~vlt 230 (259)
T COG4559 227 DVLT 230 (259)
T ss_pred HhcC
Confidence 8763
No 407
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.4e-32 Score=301.10 Aligned_cols=186 Identities=19% Similarity=0.277 Sum_probs=152.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-------cceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-------QKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.+...
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 113 (233)
T PRK11629 37 MMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL 113 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHH
Confidence 47999999999999999999999887 9999999988754321 2468999999988999999999988653
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
..+.. .. +.+..++++++.+||++..++.++ .||||||||+
T Consensus 114 ~~~~~--------------------~~--------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG~~qrl 154 (233)
T PRK11629 114 IGKKK--------------------PA--------------EINSRALEMLAAVGLEHRANHRPS-----ELSGGERQRV 154 (233)
T ss_pred hcCCC--------------------HH--------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHH
Confidence 21100 00 001234667899999877776664 4999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
+||+|++.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.|++ +++.. +|++++|++|++++.|+.
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~-~~~~~-~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 155 AIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDL-QLAKR-MSRQLEMRDGRLTAELSL 229 (233)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH-HHHHh-hCEEEEEECCEEEEEecc
Confidence 9999999999999999999999999999999999998765688999986664 45554 689999999999988764
No 408
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=99.98 E-value=3.5e-32 Score=347.78 Aligned_cols=211 Identities=28% Similarity=0.444 Sum_probs=173.6
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+. +++.+|+|+|++++|||.+||+|+||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 455 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~i 521 (694)
T TIGR01846 455 AITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVDL 521 (694)
T ss_pred eEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEeh
Confidence 5889999887531 234699999999999999999999999999999999998763 479999999986
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.++||+|++.+++ .|++||+.+.. ...+.++ +.++++..++.+. .|+.++..
T Consensus 522 ~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~~~----i~~a~~~~~l~~~i~~lp~gl~t~i~~~- 590 (694)
T TIGR01846 522 AIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPFEH----VIHAAKLAGAHDFISELPQGYNTEVGEK- 590 (694)
T ss_pred hhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCHHH----HHHHHHHcChHHHHHhCcCccCcEecCC-
Confidence 53 356778999999998886 59999997531 1223332 4455666665432 45666643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++. +++|+|++||+++ ....+|++++|++
T Consensus 591 g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~- 666 (694)
T TIGR01846 591 GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK- 666 (694)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC-
Confidence 46899999999999999999999999999999999999999999999985 5899999999974 5567999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 667 G~i~~~g~~ 675 (694)
T TIGR01846 667 GQIAESGRH 675 (694)
T ss_pred CEEEEeCCH
Confidence 899999985
No 409
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1.8e-32 Score=287.76 Aligned_cols=151 Identities=32% Similarity=0.544 Sum_probs=133.5
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCH
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ---ETFARISGYCEQNDIHSPQVTV 797 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv 797 (1293)
.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~-~t~ 92 (171)
T cd03228 16 PVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDP--TSGEILIDGVDLRDLDLESLRKNIAYVPQDPFLFS-GTI 92 (171)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCCEEEECCEEhhhcCHHHHHhhEEEEcCCchhcc-chH
Confidence 699999999999999999999999999999999998663 47999999987532 234567999999987765 588
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000773 798 KESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGL 877 (1293)
Q Consensus 798 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgL 877 (1293)
.||+ ||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~e~l---------------------------------------------LS~G~~~rl~la~al~~~p~llllDEP~~gL 127 (171)
T cd03228 93 RENI---------------------------------------------LSGGQRQRIAIARALLRDPPILILDEATSAL 127 (171)
T ss_pred HHHh---------------------------------------------hCHHHHHHHHHHHHHhcCCCEEEEECCCcCC
Confidence 8775 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 878 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 878 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
|+.++..+.+.|+++.+ ++|||++||+++ ++.. +|++++|.+
T Consensus 128 D~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~-~d~~~~l~~ 169 (171)
T cd03228 128 DPETEALILEALRALAK-GKTVIVIAHRLS-TIRD-ADRIIVLDD 169 (171)
T ss_pred CHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HHHh-CCEEEEEcC
Confidence 99999999999999864 799999999975 4544 999999975
No 410
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.98 E-value=6.8e-32 Score=298.89 Aligned_cols=200 Identities=23% Similarity=0.264 Sum_probs=156.3
Q ss_pred cccceeeeee-----cCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 000773 722 LLNEVTSAFR-----PGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 722 iL~~vs~~i~-----~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lT 796 (1293)
.+++++++++ +||+++|+||||||||||+++|+|...+ .+|+|.++|. .++|++|+....+.+|
T Consensus 9 ~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~p--~~G~i~~~g~---------~i~~~~q~~~~~~~~t 77 (246)
T cd03237 9 TLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKP--DEGDIEIELD---------TVSYKPQYIKADYEGT 77 (246)
T ss_pred ccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCc---------eEEEecccccCCCCCC
Confidence 5566666664 7999999999999999999999998663 4799999874 4899999988778899
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000773 797 VKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSG 876 (1293)
Q Consensus 797 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsg 876 (1293)
|+|++.+...... .. ...++++++.+++.+..++.++ .|||||||||+||+||+.+|++++|||||++
T Consensus 78 v~e~l~~~~~~~~----~~---~~~~~~~l~~l~l~~~~~~~~~-----~LSgGe~qrv~iaraL~~~p~llllDEPt~~ 145 (246)
T cd03237 78 VRDLLSSITKDFY----TH---PYFKTEIAKPLQIEQILDREVP-----ELSGGELQRVAIAACLSKDADIYLLDEPSAY 145 (246)
T ss_pred HHHHHHHHhhhcc----cc---HHHHHHHHHHcCCHHHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999875432110 11 1235688999999887777655 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHHhHhheeecCcEEE--EeCCCCCChhHHHHHHHhC
Q 000773 877 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI--YSGPLGRNSHKVIEYYEAI 946 (1293)
Q Consensus 877 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~--~~g~~~~~~~~~~~~~~~~ 946 (1293)
||+.++..+.+.|++++++ |+|||+++|+++ .+...+|++++|.+ +..+ ..+++....+.+..|++..
T Consensus 146 LD~~~~~~l~~~l~~~~~~~~~tiiivsHd~~-~~~~~~d~i~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 216 (246)
T cd03237 146 LDVEQRLMASKVIRRFAENNEKTAFVVEHDII-MIDYLADRLIVFEG-EPSVNGVANPPQSLRSGMNRFLKNL 216 (246)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEcC-CCeeEEEeCCchHHHHHHHHHHHHC
Confidence 9999999999999998764 899999999964 46667999999963 3323 2333332223445555544
No 411
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.98 E-value=2e-32 Score=296.91 Aligned_cols=177 Identities=25% Similarity=0.340 Sum_probs=146.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccc-cCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDV-HVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||+||+.++......
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~-- 102 (205)
T cd03226 28 IIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVREELLLGLKELDA-- 102 (205)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHHHHhhhhhhcCc--
Confidence 47999999999999999999999987 9999999988754334457999999974 34467999999875431100
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.+..++++++.+||.+..++.++ .||||||||++|||||
T Consensus 103 ------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral 141 (205)
T cd03226 103 ------------------------------------GNEQAETVLKDLDLYALKERHPL-----SLSGGQKQRLAIAAAL 141 (205)
T ss_pred ------------------------------------cHHHHHHHHHHcCCchhcCCCch-----hCCHHHHHHHHHHHHH
Confidence 01124567899999887777765 4999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEE
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIV 225 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~ 225 (1293)
+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|+ .+++.+.+|++++|++|+++
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sH~-~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 142 LSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGKAVIVITHD-YEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999999999875 48899987655 46788899999999999874
No 412
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=99.98 E-value=2.8e-32 Score=342.88 Aligned_cols=212 Identities=23% Similarity=0.377 Sum_probs=174.6
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++++.+. .++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 330 ~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~i 396 (571)
T TIGR02203 330 DVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHDL 396 (571)
T ss_pred eEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEeH
Confidence 5889999887531 124699999999999999999999999999999999998764 479999999875
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.++|++|++.+++. |++||+.++. +++.+++ +++++++.+|+.+. .|+.++..
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~~-Ti~~Ni~~~~----~~~~~~~----~i~~~l~~~~l~~~i~~lp~gldt~i~~~- 466 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFND-TIANNIAYGR----TEQADRA----EIERALAAAYAQDFVDKLPLGLDTPIGEN- 466 (571)
T ss_pred HhcCHHHHHhhceEEccCcccccc-cHHHHHhcCC----CCCCCHH----HHHHHHHHcChHHHHHhCcCcccceecCC-
Confidence 43 4466789999999988755 9999997641 1123332 25677777777543 35556643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
.+.||||||||++||||++++|++++||||||+||+.+++.+++.|++++ +++|+|++||++ +....+|++++|++
T Consensus 467 g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~--~~~~~~D~ii~l~~- 542 (571)
T TIGR02203 467 GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRL--STIEKADRIVVMDD- 542 (571)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhh--HHHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999875 479999999996 46788999999975
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 543 g~i~~~g~~ 551 (571)
T TIGR02203 543 GRIVERGTH 551 (571)
T ss_pred CEEEeeCCH
Confidence 899988885
No 413
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.98 E-value=3.1e-32 Score=313.64 Aligned_cols=193 Identities=21% Similarity=0.239 Sum_probs=158.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeecccc--ccCCCCCHHHHHHHHh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQND--VHVGEMTVKETLDFSA 72 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTV~e~l~f~~ 72 (1293)
+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+.. .++.++||+|++ .+++.+||.|++.+..
T Consensus 49 ~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l 125 (331)
T PRK15079 49 TLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 125 (331)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999987 999999999876432 235799999997 5888999999998865
Q ss_pred hccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccch
Q 000773 73 RCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQKK 151 (1293)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1293)
...... .+.. +.++.++++++.+||. +..++.. ..|||||||
T Consensus 126 ~~~~~~------------------~~~~--------------~~~~~~~~~l~~vgl~~~~~~~~p-----~~LSgG~~Q 168 (331)
T PRK15079 126 RTYHPK------------------LSRQ--------------EVKDRVKAMMLKVGLLPNLINRYP-----HEFSGGQCQ 168 (331)
T ss_pred HHhccC------------------CCHH--------------HHHHHHHHHHHHcCCChHHhcCCc-----ccCCHHHHH
Confidence 421100 0000 0122356678999994 3455544 569999999
Q ss_pred hhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 152 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 152 Rv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
||+|||||+.+|+++++||||+|||+.++.++++.|+++.++.+.|+|++ +|+...+.+++|||++|++|++++.|+.+
T Consensus 169 Rv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~i-THdl~~~~~~~dri~vl~~G~ive~g~~~ 247 (331)
T PRK15079 169 RIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFI-AHDLAVVKHISDRVLVMYLGHAVELGTYD 247 (331)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 99999999999999999999999999999999999999987668899886 55667888899999999999999999998
Q ss_pred hHH
Q 000773 232 RVL 234 (1293)
Q Consensus 232 ~~~ 234 (1293)
++.
T Consensus 248 ~i~ 250 (331)
T PRK15079 248 EVY 250 (331)
T ss_pred HHH
Confidence 875
No 414
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.98 E-value=4.8e-32 Score=296.94 Aligned_cols=187 Identities=25% Similarity=0.354 Sum_probs=147.5
Q ss_pred cccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCCh-------hcccceEEEEccCCCCC
Q 000773 720 LRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ-------ETFARISGYCEQNDIHS 792 (1293)
Q Consensus 720 ~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~ 792 (1293)
+.+++|+||++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.++|++|++.++
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (218)
T cd03290 14 LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQT--LEGKVHWSNKNESEPSFEATRSRNRYSVAYAAQKPWLL 91 (218)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCcccccccccccchhhcceEEEEcCCCccc
Confidence 5699999999999999999999999999999999998653 47999999986532 12345799999999877
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000773 793 PQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDA-------IVGLPGVTGLSIEQRKRLTIAVELVANP 865 (1293)
Q Consensus 793 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~~~lSgGerqrv~ia~aL~~~p 865 (1293)
..|++||+.+... ...+ ...++++.+++.+..+. ..+. .+..||||||||++||++|+.+|
T Consensus 92 -~~t~~~nl~~~~~------~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 92 -NATVEENITFGSP------FNKQ----RYKAVTDACSLQPDIDLLPFGDQTEIGE-RGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred -cccHHHHHhhcCc------CCHH----HHHHHHHHhCcHHHHHhCcCccccCccc-CCCcCCHHHHHHHHHHHHHhhCC
Confidence 5799999976421 1111 12455666666443221 1111 24579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH--HHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeec
Q 000773 866 SIIFMDEPTSGLDARAAAIVMR--TVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 922 (1293)
Q Consensus 866 ~illlDEPtsgLD~~~~~~i~~--~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 922 (1293)
++|+|||||+|||+.++..+++ +++.+.++|.|+|++||+++ .+ ..+|++++|.+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~ 216 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQ-YL-PHADWIIAMKD 216 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChH-HH-hhCCEEEEecC
Confidence 9999999999999999999998 67766666899999999975 34 57999999874
No 415
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=3.1e-32 Score=296.93 Aligned_cols=183 Identities=27% Similarity=0.426 Sum_probs=151.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc--ccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV--PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+..
T Consensus 27 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 103 (211)
T cd03264 27 MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIP 103 (211)
T ss_pred cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhCCC
Confidence 47999999999999999999999987 999999998765422 2456899999999999999999998765422100
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
..+ .++.++.+++.+||++..++.+++ ||||||||++||||
T Consensus 104 --------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~la~a 144 (211)
T cd03264 104 --------------------SKE--------------VKARVDEVLELVNLGDRAKKKIGS-----LSGGMRRRVGIAQA 144 (211)
T ss_pred --------------------HHH--------------HHHHHHHHHHHCCCHHHHhCchhh-----CCHHHHHHHHHHHH
Confidence 000 012346678899998777777654 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
|+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++. |...++.+.+||+++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~vs-H~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILST-HIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEc-CCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999864 47888865 5556788899999999999998765
No 416
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=3.2e-32 Score=296.83 Aligned_cols=185 Identities=23% Similarity=0.363 Sum_probs=152.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++......
T Consensus 26 ~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-- 100 (211)
T cd03298 26 ITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGLK-- 100 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhcccccccC--
Confidence 47999999999999999999999987 999999998875432 245689999999999999999999875321100
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
. .. ..+..++++++.+||.+..++.+. .||||||||++||||+
T Consensus 101 -~---~~----------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ia~al 143 (211)
T cd03298 101 -L---TA----------------------------EDRQAIEVALARVGLAGLEKRLPG-----ELSGGERQRVALARVL 143 (211)
T ss_pred -c---cH----------------------------HHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHH
Confidence 0 00 001234667899999877777665 4999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
+.+|++++|||||+|||+.++..+.+.|+++++++++|+|++.| ...++.+.+|++++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH-~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTH-QPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEec-CHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999997666889998755 556788899999999999998654
No 417
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=99.98 E-value=3.6e-32 Score=337.94 Aligned_cols=187 Identities=25% Similarity=0.407 Sum_probs=155.4
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+. ++.+|+|+|+++++||++||+||||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 334 ~I~~~~vsf~Y~~------------~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p--~~G~I~i~g~~i 399 (529)
T TIGR02868 334 TLELRDLSFGYPG------------SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDP--LQGEVTLDGVSV 399 (529)
T ss_pred eEEEEEEEEecCC------------CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEh
Confidence 5899999987631 23599999999999999999999999999999999998764 589999999876
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCC
Q 000773 774 KQ--ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPGV 844 (1293)
Q Consensus 774 ~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~~ 844 (1293)
++ ..+++.++||||++.+++. |++||+.++. ...++++ ++++++..++.+ -.|+.+|+. .
T Consensus 400 ~~~~~~lr~~i~~V~Q~~~lF~~-TI~eNI~~g~-----~~~~~e~----i~~al~~a~l~~~i~~lp~GldT~ige~-G 468 (529)
T TIGR02868 400 SSLQDELRRRISVFAQDAHLFDT-TVRDNLRLGR-----PDATDEE----LWAALERVGLADWLRSLPDGLDTVLGEG-G 468 (529)
T ss_pred hhHHHHHHhheEEEccCcccccc-cHHHHHhccC-----CCCCHHH----HHHHHHHcCCHHHHHhCcccccchhccc-c
Confidence 53 4466789999999999865 9999998741 1223332 567777777654 346777753 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 906 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 906 (1293)
.+||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++. +++|+|+++|++
T Consensus 469 ~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 469 ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 5799999999999999999999999999999999999999999999864 579999999974
No 418
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.98 E-value=5.3e-32 Score=300.23 Aligned_cols=191 Identities=23% Similarity=0.338 Sum_probs=156.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc--ccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV--PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... ..+.++|++|++.+++.+|++||+.+.....+..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~ 105 (236)
T TIGR03864 29 FVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALHGLS 105 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCC
Confidence 47999999999999999999999987 999999998765322 1246899999998888999999998754322100
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.. +....++++++.+||++..++.+++ ||||||||++||||
T Consensus 106 --------------------~~--------------~~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrl~lara 146 (236)
T TIGR03864 106 --------------------RA--------------EARERIAALLARLGLAERADDKVRE-----LNGGHRRRVEIARA 146 (236)
T ss_pred --------------------HH--------------HHHHHHHHHHHHcCChhhhcCChhh-----CCHHHHHHHHHHHH
Confidence 00 0011345678899998877777654 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|+.+|++++|||||+|||+.++..+.+.|+++++++++|+|++.|++ +++. .+|++++|++|++++.|+++++.+
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~-~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLV-DEIE-ADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCh-hhHh-hCCEEEEEeCCeEEEeCCHHHHHH
Confidence 99999999999999999999999999999998765688999876655 4555 599999999999999999877654
No 419
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.98 E-value=2.6e-32 Score=299.35 Aligned_cols=184 Identities=29% Similarity=0.429 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 109 (218)
T cd03266 33 VTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYGLK 109 (218)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999887532 22457999999999999899999998754322100
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.. +....++++++.+||.+..++.+++ ||||||||++||||
T Consensus 110 --------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~lara 150 (218)
T cd03266 110 --------------------GD--------------ELTARLEELADRLGMEELLDRRVGG-----FSTGMRQKVAIARA 150 (218)
T ss_pred --------------------HH--------------HHHHHHHHHHHHcCCHHHHhhhhhh-----cCHHHHHHHHHHHH
Confidence 00 0112356688999998877776654 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
++.+|++++|||||+|||+.++..+.+.|+++++ .++|+|+++|+ .+++.+.+|++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~-~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFSTHI-MQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999865 58899987655 46788899999999999998754
No 420
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.98 E-value=3.2e-32 Score=300.17 Aligned_cols=190 Identities=26% Similarity=0.340 Sum_probs=154.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+.++...... .
T Consensus 13 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~- 85 (230)
T TIGR01184 13 FISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIALAVDRVLP-D- 85 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHHHHHHhccc-C-
Confidence 47999999999999999999999987 9999999988754322 248999999999999999999876321000 0
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
. ... +.+..++++++.+||++..++.+++ ||||||||++||++|+
T Consensus 86 ~----------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~la~al~ 130 (230)
T TIGR01184 86 L----------------SKS--------------ERRAIVEEHIALVGLTEAADKRPGQ-----LSGGMKQRVAIARALS 130 (230)
T ss_pred C----------------CHH--------------HHHHHHHHHHHHcCCHHHHcCChhh-----CCHHHHHHHHHHHHHH
Confidence 0 000 0012345678999998877777654 9999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.+|++++|++|++++.|+..++
T Consensus 131 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 131 IRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHD-VDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhcCEEEEEeCCcEecccCceec
Confidence 99999999999999999999999999999877668899987555 5678889999999999999988865543
No 421
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.98 E-value=3e-32 Score=299.25 Aligned_cols=188 Identities=28% Similarity=0.439 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~ 106 (220)
T cd03263 30 IFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKGLP 106 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999886532 22456899999998888999999998865432110
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.. +.+..++++++.+||.+..++.+++ ||||||||++||||
T Consensus 107 --------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~la~a 147 (220)
T cd03263 107 --------------------KS--------------EIKEEVELLLRVLGLTDKANKRART-----LSGGMKRKLSLAIA 147 (220)
T ss_pred --------------------HH--------------HHHHHHHHHHHHcCCHHHHhChhhh-----CCHHHHHHHHHHHH
Confidence 00 0012245678899998877777654 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
++.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++.|+ .+++.+.+|++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~-~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILTTHS-MDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEEcCC-HHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999999864 4888887555 5678889999999999999999987764
No 422
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=99.98 E-value=7.5e-33 Score=306.22 Aligned_cols=217 Identities=25% Similarity=0.375 Sum_probs=177.1
Q ss_pred cceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcC
Q 000773 691 TPLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG 770 (1293)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g 770 (1293)
....++|+|+++..+ .++++|+||||++.||+.+||+|||||||||++++|.+..+ ..+|.|.+||
T Consensus 534 ~~G~i~fsnvtF~Y~------------p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd--v~sGsI~iDg 599 (790)
T KOG0056|consen 534 TQGKIEFSNVTFAYD------------PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD--VNSGSITIDG 599 (790)
T ss_pred cCCeEEEEEeEEecC------------CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh--ccCceEEEcC
Confidence 345789999998764 35789999999999999999999999999999999998654 3479999999
Q ss_pred ccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHH--HHHH-HHcCCcccccccccCCCC
Q 000773 771 FPKKQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFV--EEVM-DLVELESLKDAIVGLPGV 844 (1293)
Q Consensus 771 ~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~--~~~l-~~l~l~~~~~~~~~~~~~ 844 (1293)
++++. ...++.||.||||..++.+ |+..|+.|+. . ..+.++..+.+ ..+- +.++..+-.++.+|..+.
T Consensus 600 qdIrnvt~~SLRs~IGVVPQDtvLFNd-TI~yNIryak---~--~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGL 673 (790)
T KOG0056|consen 600 QDIRNVTQSSLRSSIGVVPQDTVLFND-TILYNIRYAK---P--SASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGL 673 (790)
T ss_pred chHHHHHHHHHHHhcCcccCcceeecc-eeeeheeecC---C--CCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhccc
Confidence 98754 4577889999999988754 8889988742 1 22333322211 1121 246777778888886544
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCc
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 924 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G 924 (1293)
.|||||||||+|||+++++|.+++|||.||.||..+.++|+..|.++++ ++|-|++.|+.+ ..-.+|.++++++ |
T Consensus 674 -kLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLS--TivnAD~ILvi~~-G 748 (790)
T KOG0056|consen 674 -KLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLS--TIVNADLILVISN-G 748 (790)
T ss_pred -ccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeeh--heecccEEEEEeC-C
Confidence 5999999999999999999999999999999999999999999999975 799999999976 4456899999985 9
Q ss_pred EEEEeCCC
Q 000773 925 QVIYSGPL 932 (1293)
Q Consensus 925 ~~~~~g~~ 932 (1293)
+|++.|..
T Consensus 749 ~IvErG~H 756 (790)
T KOG0056|consen 749 RIVERGRH 756 (790)
T ss_pred eEeecCcH
Confidence 99999875
No 423
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=99.98 E-value=6.3e-32 Score=297.55 Aligned_cols=188 Identities=35% Similarity=0.542 Sum_probs=153.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC---CCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLN---RDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~---~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+++|+|.++ |+ +|+|.++|.++.....++.++|++|++.+++.+||+||+.++......
T Consensus 35 ~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~ 111 (226)
T cd03234 35 VMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLP 111 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcc
Confidence 479999999999999999999998 66 999999998875444466799999999999999999999987543211
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHH-HHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDY-TLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
.... ... .....+. .++.+++++..++.++ .||||||||++||
T Consensus 112 ~~~~---~~~----------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la 155 (226)
T cd03234 112 RKSS---DAI----------------------------RKKRVEDVLLRDLALTRIGGNLVK-----GISGGERRRVSIA 155 (226)
T ss_pred cccc---hHH----------------------------HHHHHHHHHHHhhcchhhhccccc-----CcCHHHHHHHHHH
Confidence 0000 000 0011233 6888888776666665 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
|+|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|+++|++..++.+.+|++++|++|++++.|
T Consensus 156 ral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 156 VQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999999875 48899998777656899999999999999998765
No 424
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=99.98 E-value=2.6e-32 Score=301.06 Aligned_cols=189 Identities=22% Similarity=0.333 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCC-----CCCCceeEEEEECCcccCCcc-----ccceEEeeccccccCCCCCHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKL-----NRDLKVRGEITYNGYRLNEFV-----PQKTSAYISQNDVHVGEMTVKETLDF 70 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~-----~~~~~~~G~v~~~g~~~~~~~-----~~~~~~yv~Q~~~~~~~lTV~e~l~f 70 (1293)
+++|+||||||||||+++|+|.+ +|+ +|+|.++|.++.... .++.++|++|++.++ .+||+||+.+
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~ 103 (227)
T cd03260 28 ITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAY 103 (227)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHh
Confidence 47999999999999999999999 776 899999998765322 245689999998887 7899999988
Q ss_pred HhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccc
Q 000773 71 SARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1293)
+....+... .. +.++.++++++.+||.+..++.+. +.+||||||
T Consensus 104 ~~~~~~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~ 147 (227)
T cd03260 104 GLRLHGIKL-------------------KE--------------ELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQ 147 (227)
T ss_pred HHHhcCCCc-------------------HH--------------HHHHHHHHHHHHcCCChHHhccCC---cccCCHHHH
Confidence 654221000 00 001234567889999876665530 245999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
||++||+||+.+|++++|||||+|||+.++..+++.|+++++ . +|+|++.|+ .+++.+.||++++|++|++++.|++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~tii~~sH~-~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK-E-YTIVIVTHN-MQQAARVADRTAFLLNGRLVEFGPT 224 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh-C-cEEEEEecc-HHHHHHhCCEEEEEeCCEEEEecCc
Confidence 999999999999999999999999999999999999999875 3 788887554 5678889999999999999999987
Q ss_pred hh
Q 000773 231 ER 232 (1293)
Q Consensus 231 ~~ 232 (1293)
++
T Consensus 225 ~~ 226 (227)
T cd03260 225 EQ 226 (227)
T ss_pred cc
Confidence 65
No 425
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.3e-32 Score=306.78 Aligned_cols=190 Identities=22% Similarity=0.324 Sum_probs=157.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++. .++..||+||+.|+....+
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (279)
T PRK13650 35 WLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKG 111 (279)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCC
Confidence 47999999999999999999999987 999999998875422 2356899999973 6777899999988654221
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
.. .. +.++.++++++.+||++..++.++ .||||||||++||
T Consensus 112 ~~--------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~qrv~lA 152 (279)
T PRK13650 112 IP--------------------HE--------------EMKERVNEALELVGMQDFKEREPA-----RLSGGQKQRVAIA 152 (279)
T ss_pred CC--------------------HH--------------HHHHHHHHHHHHCCCHhHhhCCcc-----cCCHHHHHHHHHH
Confidence 10 00 011235668999999887777665 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||+.+|++++|||||+|||+.++..+++.|++++++.|+|+|+++|+. +++ ..+|++++|++|+++..|+++++.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~-~~~-~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDL-DEV-ALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999876689999986664 456 579999999999999999988764
No 426
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.3e-32 Score=305.93 Aligned_cols=189 Identities=24% Similarity=0.326 Sum_probs=155.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..||+||+.|+....+
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 109 (274)
T PRK13647 33 KTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMG 109 (274)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcC
Confidence 47999999999999999999999987 999999998875432 2356899999863 4456799999988643211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
.. .. +.+..++.+++.+||.+..++.+.+ |||||||||+||
T Consensus 110 ~~--------------------~~--------------~~~~~~~~~l~~~~L~~~~~~~~~~-----LSgG~~qrv~la 150 (274)
T PRK13647 110 LD--------------------KD--------------EVERRVEEALKAVRMWDFRDKPPYH-----LSYGQKKRVAIA 150 (274)
T ss_pred CC--------------------HH--------------HHHHHHHHHHHHCCCHHHhcCChhh-----CCHHHHHHHHHH
Confidence 00 00 0112356678999998877777754 999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
|||+.+|++++|||||+|||+.++..+++.|+++++ .|+|+|+++| ..+++.+.|||+++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tili~tH-~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-QGKTVIVATH-DVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999999999976 4889998755 45678889999999999999999998654
No 427
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.98 E-value=7.5e-32 Score=336.55 Aligned_cols=211 Identities=23% Similarity=0.388 Sum_probs=171.4
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+. +++.+|+|+|+++++||.++|+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 313 ~I~~~~v~~~y~~-----------~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p--~~G~i~~~g~~~ 379 (569)
T PRK10789 313 ELDVNIRQFTYPQ-----------TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDV--SEGDIRFHDIPL 379 (569)
T ss_pred cEEEEEEEEECCC-----------CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCEEEECCEEH
Confidence 4788888776531 234699999999999999999999999999999999998763 579999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
.. ..+++.++|++|++.+++. |++||+.++. ...++++ ++++++..++.+ -.|+.+|. +
T Consensus 380 ~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~~----~~~~~~~~~l~~~i~~lp~gl~t~~~~-~ 448 (569)
T PRK10789 380 TKLQLDSWRSRLAVVSQTPFLFSD-TVANNIALGR-----PDATQQE----IEHVARLASVHDDILRLPQGYDTEVGE-R 448 (569)
T ss_pred hhCCHHHHHhheEEEccCCeeccc-cHHHHHhcCC-----CCCCHHH----HHHHHHHcCCHHHHHhCcCcccceecC-C
Confidence 43 3456789999999998875 9999997631 1223322 345566655543 23555554 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++++|||||++||+.++..+.+.|+++. +|+|+|+++|+++ ....+|++++|++
T Consensus 449 g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tii~itH~~~--~~~~~d~i~~l~~- 524 (569)
T PRK10789 449 GVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG-EGRTVIISAHRLS--ALTEASEILVMQH- 524 (569)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchh--HHHcCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999875 5899999999974 5677999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 525 G~i~~~g~~ 533 (569)
T PRK10789 525 GHIAQRGNH 533 (569)
T ss_pred CEEEEecCH
Confidence 899999985
No 428
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=5.8e-32 Score=295.33 Aligned_cols=183 Identities=27% Similarity=0.409 Sum_probs=151.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+...
T Consensus 25 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~ 101 (214)
T cd03297 25 VTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLAFGLK 101 (214)
T ss_pred eEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHHHHHHHHh
Confidence 47999999999999999999999987 99999999876421 124568999999999989999999987642
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
... . .. .+..++++++.+||++..++.++ .||||||||+
T Consensus 102 ~~~-----~------~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 140 (214)
T cd03297 102 RKR-----N------RE-------------------------DRISVDELLDLLGLDHLLNRYPA-----QLSGGEKQRV 140 (214)
T ss_pred hCC-----H------HH-------------------------HHHHHHHHHHHcCCHhHhhcCcc-----cCCHHHHHHH
Confidence 110 0 00 01124567889999876666664 4999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
+||+|++.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.+|++++|++|++++.|
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 141 ALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHD-LSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecC-HHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999977558898887554 56788899999999999998765
No 429
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.98 E-value=5.5e-32 Score=301.07 Aligned_cols=190 Identities=20% Similarity=0.331 Sum_probs=156.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-----cccceEEeeccccccCCCCCHHHHHHHHhhc-
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-----VPQKTSAYISQNDVHVGEMTVKETLDFSARC- 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~- 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~ 105 (240)
T PRK09493 29 VVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999887 99999999887542 1245689999999888899999999875421
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+. ... +.++.++++++.+||++..++.+. .||||||||++
T Consensus 106 ~~~--------------------~~~--------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~ 146 (240)
T PRK09493 106 RGA--------------------SKE--------------EAEKQARELLAKVGLAERAHHYPS-----ELSGGQQQRVA 146 (240)
T ss_pred cCC--------------------CHH--------------HHHHHHHHHHHHcCChHHHhcChh-----hcCHHHHHHHH
Confidence 100 000 011234667899999877777664 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||||++.+|++++|||||+|||+.++..+.+.|+++++ +++|+|+++|+ .+++.+.||++++|++|++++.|+.+++.
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 147 IARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EGMTMVIVTHE-IGFAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 99999999999999999999999999999999999875 48899987665 46788899999999999999999988764
No 430
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=1.6e-32 Score=312.28 Aligned_cols=191 Identities=24% Similarity=0.381 Sum_probs=158.2
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 2 TLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 2 ~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+||+|+|||||||++|+|.+... + +|+|.+||+++.+.. .++.+|||||+..+|.+ ||.+||.+|-.-.
T Consensus 381 VaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~sa--- 452 (591)
T KOG0057|consen 381 VAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNPSA--- 452 (591)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCCCc---
Confidence 69999999999999999999987 4 899999999886543 46789999999988876 9999999975322
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.++.+.+.|+... .++ ....|++.++|.||+ .+..|||||||||+||||
T Consensus 453 -s~eeV~e~~k~a~---------------------------~hd--~i~~l~~GY~T~VGe-rG~~LSGGekQrvslaRa 501 (591)
T KOG0057|consen 453 -SDEEVVEACKRAG---------------------------LHD--VISRLPDGYQTLVGE-RGLMLSGGEKQRVSLARA 501 (591)
T ss_pred -CHHHHHHHHHHcC---------------------------cHH--HHHhccccchhhHhh-cccccccchHHHHHHHHH
Confidence 1222333333221 011 123578899999995 566699999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
++.+|+|+++|||||+||+++..++++.+.+. ..++|+|++.|.. ...+.||+|++|++|++.+.|+++|++.
T Consensus 502 ~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~IvH~l--~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 502 FLKDAPILLLDEATSALDSETEREILDMIMDV--MSGRTVIMIVHRL--DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HhcCCCeEEecCcccccchhhHHHHHHHHHHh--cCCCeEEEEEecc--hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999999999999884 3589999988765 4778999999999999999999999875
No 431
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.98 E-value=6.6e-32 Score=302.52 Aligned_cols=191 Identities=21% Similarity=0.300 Sum_probs=155.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-----------cccceEEeeccccccCCCCCHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-----------VPQKTSAYISQNDVHVGEMTVKETLD 69 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-----------~~~~~~~yv~Q~~~~~~~lTV~e~l~ 69 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~ 107 (250)
T PRK11264 31 VVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENII 107 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHH
Confidence 47999999999999999999999887 89999999876431 12456899999998898899999998
Q ss_pred HHhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCccccccccc
Q 000773 70 FSARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQ 149 (1293)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1293)
++........ .. +....++++++.+||.+..|+.++ .|||||
T Consensus 108 ~~~~~~~~~~-------------------~~--------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~Gq 149 (250)
T PRK11264 108 EGPVIVKGEP-------------------KE--------------EATARARELLAKVGLAGKETSYPR-----RLSGGQ 149 (250)
T ss_pred HHHHHhcCCC-------------------HH--------------HHHHHHHHHHHHcCCcchhhCChh-----hCChHH
Confidence 7532110000 00 011234567889999877776664 499999
Q ss_pred chhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcC
Q 000773 150 KKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGP 229 (1293)
Q Consensus 150 rqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~ 229 (1293)
||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.| ..+++.+.+|++++|++|++++.|+
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~tH-~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EKRTMVIVTH-EMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cCCEEEEEeC-CHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999875 4789888755 4567888999999999999999999
Q ss_pred hhhHH
Q 000773 230 RERVL 234 (1293)
Q Consensus 230 ~~~~~ 234 (1293)
.+++.
T Consensus 228 ~~~~~ 232 (250)
T PRK11264 228 AKALF 232 (250)
T ss_pred HHHHh
Confidence 87763
No 432
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.9e-32 Score=308.20 Aligned_cols=191 Identities=20% Similarity=0.288 Sum_probs=155.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeecccc--ccCCCCCHHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQND--VHVGEMTVKETLDFS 71 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~lTV~e~l~f~ 71 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .+++ .||.||+.|+
T Consensus 35 ~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~ 110 (286)
T PRK13646 35 YYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFG 110 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhh
Confidence 47999999999999999999999988 99999999887532 1245789999986 4554 5999999986
Q ss_pred hhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccc
Q 000773 72 ARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1293)
....+.. .. +....++++++.+||. +..++.+. .||||||
T Consensus 111 ~~~~~~~--------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~-----~LSgGq~ 151 (286)
T PRK13646 111 PKNFKMN--------------------LD--------------EVKNYAHRLLMDLGFSRDVMSQSPF-----QMSGGQM 151 (286)
T ss_pred HHHcCCC--------------------HH--------------HHHHHHHHHHHHcCCChhhhhCCcc-----cCCHHHH
Confidence 5321110 00 0112356678999996 56666554 5999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++.|+|+|+++|+ .+++.+.+||+++|++|++++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~-~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHD-MNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecC-HHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999976668999997554 5678889999999999999999998
Q ss_pred hhHHH
Q 000773 231 ERVLE 235 (1293)
Q Consensus 231 ~~~~~ 235 (1293)
+++.+
T Consensus 231 ~~~~~ 235 (286)
T PRK13646 231 KELFK 235 (286)
T ss_pred HHHHh
Confidence 87643
No 433
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.9e-32 Score=309.97 Aligned_cols=190 Identities=22% Similarity=0.327 Sum_probs=153.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCC---------------------------ccccceEEeec
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNE---------------------------FVPQKTSAYIS 53 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~---------------------------~~~~~~~~yv~ 53 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+... ...++.+|||+
T Consensus 35 ~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~ 111 (305)
T PRK13651 35 FIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVF 111 (305)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEe
Confidence 47999999999999999999999987 8999999865421 11245689999
Q ss_pred ccc-ccCCCCCHHHHHHHHhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-c
Q 000773 54 QND-VHVGEMTVKETLDFSARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-I 131 (1293)
Q Consensus 54 Q~~-~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~ 131 (1293)
|++ ..+...||+|++.|+....+.. .. +..+.++++++.+||+ +
T Consensus 112 Q~~~~~l~~~tv~e~i~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~gL~~~ 157 (305)
T PRK13651 112 QFAEYQLFEQTIEKDIIFGPVSMGVS--------------------KE--------------EAKKRAAKYIELVGLDES 157 (305)
T ss_pred eCcccccccccHHHHHHhhHHHcCCC--------------------HH--------------HHHHHHHHHHHHcCCChh
Confidence 985 3344579999999875432110 00 0112356788999996 5
Q ss_pred ccCcccCCCcccccccccchhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHH
Q 000773 132 CKDTIVGDEMNRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFD 211 (1293)
Q Consensus 132 ~~~t~vg~~~~~~LSGGqrqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~ 211 (1293)
..++.+. .|||||||||+||++|+.+|++++|||||+|||+.++..+++.|+++.+ .|+|||++. |..+++.+
T Consensus 158 ~~~~~~~-----~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivt-Hd~~~~~~ 230 (305)
T PRK13651 158 YLQRSPF-----ELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QGKTIILVT-HDLDNVLE 230 (305)
T ss_pred hhhCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-eCHHHHHH
Confidence 6676664 4999999999999999999999999999999999999999999999875 588988874 55667889
Q ss_pred hccceEEecCCeEEEEcChhhHH
Q 000773 212 LFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 212 ~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
.+|||++|++|++++.|+++++.
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988864
No 434
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=99.98 E-value=6.4e-32 Score=301.16 Aligned_cols=180 Identities=22% Similarity=0.287 Sum_probs=151.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+||+.++...
T Consensus 40 ~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~enl~~~~~~------ 108 (257)
T PRK11247 40 FVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVIDNVGLGLKG------ 108 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHHHHHhcccc------
Confidence 47999999999999999999999987 9999999976532 345689999999888889999999874210
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
. .+..++++++.+||.+..+..++ .||||||||++|||+|+
T Consensus 109 -----~-----------------------------~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGqkqrl~laraL~ 149 (257)
T PRK11247 109 -----Q-----------------------------WRDAALQALAAVGLADRANEWPA-----ALSGGQKQRVALARALI 149 (257)
T ss_pred -----h-----------------------------HHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHh
Confidence 0 00123557888999877676664 49999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ .+++.+.+|++++|++|++++.|+.+
T Consensus 150 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd-~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 150 HRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHD-VSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999999999876668899887554 55778899999999999999988754
No 435
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.3e-32 Score=309.51 Aligned_cols=189 Identities=21% Similarity=0.392 Sum_probs=153.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------------------cccceEEeecccc--ccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------------------VPQKTSAYISQND--VHV 59 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------------------~~~~~~~yv~Q~~--~~~ 59 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.+. ..++.++||+|++ .++
T Consensus 54 ~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~ 130 (320)
T PRK13631 54 IYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF 130 (320)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECchhccc
Confidence 47999999999999999999999987 99999999876432 1245799999986 455
Q ss_pred CCCCHHHHHHHHhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccC
Q 000773 60 GEMTVKETLDFSARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVG 138 (1293)
Q Consensus 60 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg 138 (1293)
+ .||+||+.|+....+. . .. +....++++++.+||+ +..++.+
T Consensus 131 ~-~tv~eni~~~~~~~~~-~-------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~- 174 (320)
T PRK13631 131 K-DTIEKDIMFGPVALGV-K-------------------KS--------------EAKKLAKFYLNKMGLDDSYLERSP- 174 (320)
T ss_pred c-chHHHHHHhhHHhcCC-C-------------------HH--------------HHHHHHHHHHHHcCCChhHhcCCc-
Confidence 5 5999999886532110 0 00 0112345678899996 4555544
Q ss_pred CCcccccccccchhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEE
Q 000773 139 DEMNRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIIL 218 (1293)
Q Consensus 139 ~~~~~~LSGGqrqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~ 218 (1293)
..|||||||||+|||||+.+|++++|||||+|||+.++..+++.|+++.+ +|+|+|+++|+ .+++.+.|||+++
T Consensus 175 ----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TiiivtHd-~~~~~~~adri~v 248 (320)
T PRK13631 175 ----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NNKTVFVITHT-MEHVLEVADEVIV 248 (320)
T ss_pred ----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEecC-HHHHHHhCCEEEE
Confidence 45999999999999999999999999999999999999999999999875 58899987554 5678889999999
Q ss_pred ecCCeEEEEcChhhHH
Q 000773 219 LSEGQIVYQGPRERVL 234 (1293)
Q Consensus 219 L~~G~i~~~G~~~~~~ 234 (1293)
|++|++++.|+++++.
T Consensus 249 l~~G~i~~~g~~~~~~ 264 (320)
T PRK13631 249 MDKGKILKTGTPYEIF 264 (320)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998764
No 436
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.6e-32 Score=297.73 Aligned_cols=191 Identities=21% Similarity=0.372 Sum_probs=158.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++.... .
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~-~-- 100 (232)
T PRK10771 27 RVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG-L-- 100 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhcccccc-c--
Confidence 47999999999999999999999987 899999998765432 2356899999999999999999998753210 0
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
.. .. ..+..++++++.+||++..++.+++ ||||||||++||+|+
T Consensus 101 ~~------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~laral 144 (232)
T PRK10771 101 KL------NA-------------------------AQREKLHAIARQMGIEDLLARLPGQ-----LSGGQRQRVALARCL 144 (232)
T ss_pred CC------CH-------------------------HHHHHHHHHHHHcCcHHHHhCCccc-----CCHHHHHHHHHHHHH
Confidence 00 00 0012356678999998877877754 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ .+++.+.+|++++|++|++++.|+.+++.
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 218 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHS-LEDAARIAPRSLVVADGRIAWDGPTDELL 218 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECC-HHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999876568899987555 56788899999999999999999987764
No 437
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.2e-31 Score=292.11 Aligned_cols=215 Identities=24% Similarity=0.304 Sum_probs=169.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC-C-CCceeEEEEECCcccCCccc-------cceEEeecccc--ccCCCCCHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLN-R-DLKVRGEITYNGYRLNEFVP-------QKTSAYISQND--VHVGEMTVKETLD 69 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~-~-~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTV~e~l~ 69 (1293)
+++|+|.|||||||+.++|+|+++ + ....+|+|.++|.++..... .+.++|++|++ .+.|.+||.+.+.
T Consensus 33 ~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~ 112 (316)
T COG0444 33 ILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIA 112 (316)
T ss_pred EEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHH
Confidence 479999999999999999999997 4 33568999999997644321 24789999996 5788899999987
Q ss_pred HHhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCccccccccc
Q 000773 70 FSARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQ 149 (1293)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1293)
-..+...... ...+..+.+.++|+.+||++-. .+-+.++.+|||||
T Consensus 113 E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~--~~~~~YPhelSGGM 158 (316)
T COG0444 113 EVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE--RRLKSYPHELSGGM 158 (316)
T ss_pred HHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH--HHHhhCCcccCCcH
Confidence 6554211000 0011233456789999998532 13356788999999
Q ss_pred chhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcC
Q 000773 150 KKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGP 229 (1293)
Q Consensus 150 rqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~ 229 (1293)
||||.||.||+.+|+++|.||||++||...+.+|++.|+++.++.|.++|++ +|+...+.++||||+||+.|+|++.|+
T Consensus 159 rQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilI-THDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 159 RQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILI-THDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 9999999999999999999999999999999999999999998889999995 677889999999999999999999999
Q ss_pred hhhHHHHHHhCCCCCCCCCChhhHHHHhc
Q 000773 230 RERVLEFFESCGFCCPERKGTADFLQEVT 258 (1293)
Q Consensus 230 ~~~~~~~f~~~G~~~~~~~~~~~~~~~~~ 258 (1293)
.+++.+ .|.+..+...+..+.
T Consensus 238 ~~~i~~--------~P~HPYT~~Ll~s~P 258 (316)
T COG0444 238 VEEIFK--------NPKHPYTRGLLNSLP 258 (316)
T ss_pred HHHHhc--------CCCChHHHHHHHhCc
Confidence 998753 355555444444443
No 438
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=99.97 E-value=4.2e-32 Score=339.18 Aligned_cols=210 Identities=26% Similarity=0.339 Sum_probs=168.9
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+ +++.+|+|+|+++++||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 334 ~i~~~~v~~~y~------------~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~i~~~g~~~ 399 (585)
T TIGR01192 334 AVEFRHITFEFA------------NSSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDP--TVGQILIDGIDI 399 (585)
T ss_pred eEEEEEEEEECC------------CCCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCC--CCCEEEECCEEh
Confidence 588999987652 124589999999999999999999999999999999998763 589999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELES-------LKDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~ 843 (1293)
.. ..+++.++|++|++.+++ .|++||+.++. + ..++++ +.++++..++.+ -.|+.++. .
T Consensus 400 ~~~~~~~~~~~i~~v~q~~~lf~-~ti~~Ni~~~~----~-~~~~~~----~~~a~~~~~~~~~i~~l~~g~~t~~~~-~ 468 (585)
T TIGR01192 400 NTVTRESLRKSIATVFQDAGLFN-RSIRENIRLGR----E-GATDEE----VYEAAKAAAAHDFILKRSNGYDTLVGE-R 468 (585)
T ss_pred hhCCHHHHHhheEEEccCCccCc-ccHHHHHhcCC----C-CCCHHH----HHHHHHHhCcHHHHHhccccccchhcC-C
Confidence 43 346678999999998886 69999997641 1 223332 233444444332 23445554 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..+||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ....+|++++|++
T Consensus 469 ~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~-~~~tvI~isH~~~--~~~~~d~i~~l~~- 544 (585)
T TIGR01192 469 GNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR-KNRTTFIIAHRLS--TVRNADLVLFLDQ- 544 (585)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh-CCCEEEEEEcChH--HHHcCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999874 5899999999974 4577999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 545 G~i~~~g~~ 553 (585)
T TIGR01192 545 GRLIEKGSF 553 (585)
T ss_pred CEEEEECCH
Confidence 899999885
No 439
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.97 E-value=9.8e-32 Score=296.67 Aligned_cols=191 Identities=24% Similarity=0.281 Sum_probs=154.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCC----CCceeEEEEECCcccCCccc-cceEEeeccccc--cCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNR----DLKVRGEITYNGYRLNEFVP-QKTSAYISQNDV--HVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~----~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~--~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|.++| + +|+|.++|.++..... ++.++|++|++. +.+.+|+.|++.+...
T Consensus 14 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~ 90 (230)
T TIGR02770 14 VLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAIETLR 90 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHHHHHH
Confidence 4799999999999999999999987 6 8999999988754332 247899999974 5567899999977543
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc---cccCcccCCCcccccccccc
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD---ICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~---~~~~t~vg~~~~~~LSGGqr 150 (1293)
..+.. .. ..+..++++++.+||. +..++.++ .||||||
T Consensus 91 ~~~~~---------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~LS~G~~ 131 (230)
T TIGR02770 91 SLGKL---------SK-------------------------QARALILEALEAVGLPDPEEVLKKYPF-----QLSGGML 131 (230)
T ss_pred HcCcc---------HH-------------------------HHHHHHHHHHHHcCCCchHHHHhCChh-----hcCHHHH
Confidence 21100 00 0012356678999997 34555554 4999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
|||+||||++.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++...+|++++|++|+++..|++
T Consensus 132 qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i~~l~~G~i~~~~~~ 210 (230)
T TIGR02770 132 QRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHD-LGVVARIADEVAVMDDGRIVERGTV 210 (230)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999876557899987554 5678889999999999999999998
Q ss_pred hhHH
Q 000773 231 ERVL 234 (1293)
Q Consensus 231 ~~~~ 234 (1293)
+++.
T Consensus 211 ~~~~ 214 (230)
T TIGR02770 211 KEIF 214 (230)
T ss_pred HHHH
Confidence 8764
No 440
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.2e-32 Score=273.48 Aligned_cols=194 Identities=26% Similarity=0.393 Sum_probs=166.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc---cceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP---QKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+|+|+|||||||||||.+++.+++.+ +|+|+++|.++..... .+.++..-|++.....+||+|-+.||.-..
T Consensus 29 iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPY-- 103 (252)
T COG4604 29 ITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHINSRLTVRDLVGFGRFPY-- 103 (252)
T ss_pred eeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcc--
Confidence 58999999999999999999999988 9999999998876443 355688899998889999999999985321
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
++.+ +. .+.+..+++.++.|+|++..|+.+ .+||||||||.-||+
T Consensus 104 -SqGR--------------lt---------------~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAM 148 (252)
T COG4604 104 -SQGR--------------LT---------------KEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAM 148 (252)
T ss_pred -cCCC--------------Cc---------------hHHHHHHHHHHHHhcccchHHHhH-----Hhcccchhhhhhhhe
Confidence 1111 11 122345778899999998888766 459999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
.++++.+.++||||.+.||...+..+++.|++++++.|+|+++++| +-..+..++|+|+-|++|+++..|+++++++
T Consensus 149 VlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlH-DINfAS~YsD~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 149 VLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLH-DINFASCYSDHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred eeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEe-cccHHHhhhhheeeecCCEEEecCCHHHhcC
Confidence 9999999999999999999999999999999999999999999865 5567888999999999999999999999864
No 441
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.97 E-value=7.1e-32 Score=296.50 Aligned_cols=181 Identities=22% Similarity=0.315 Sum_probs=147.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-------cceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-------QKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.+...
T Consensus 33 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~ 109 (221)
T TIGR02211 33 IVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLL 109 (221)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999987 9999999988754321 2468999999988889999999988643
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
..... .. +....+.++++.+||.+..++.++ .||||||||+
T Consensus 110 ~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 150 (221)
T TIGR02211 110 IGKKS--------------------VK--------------EAKERAYEMLEKVGLEHRINHRPS-----ELSGGERQRV 150 (221)
T ss_pred hcCCC--------------------HH--------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHH
Confidence 21100 00 001224567889999877777665 4999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEE
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIV 225 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~ 225 (1293)
+|||+|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|+++|++ +++ ..+|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~-~~~-~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDL-ELA-KKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHH-hhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999999999765688999986665 455 457999999999975
No 442
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.97 E-value=1.2e-31 Score=296.41 Aligned_cols=187 Identities=25% Similarity=0.304 Sum_probs=149.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeecccc--ccCCCCCHHHHHHHHh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQND--VHVGEMTVKETLDFSA 72 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTV~e~l~f~~ 72 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+++.+||+||+.+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~ 109 (228)
T cd03257 33 TLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPL 109 (228)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHH
Confidence 47999999999999999999999987 999999998875432 245799999998 4667899999998765
Q ss_pred hccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccch
Q 000773 73 RCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQKK 151 (1293)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1293)
........ . .. .+...+++++.+||. +..++.++ .|||||||
T Consensus 110 ~~~~~~~~--------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----~LS~G~~q 152 (228)
T cd03257 110 RIHGKLSK--------K----------EA--------------RKEAVLLLLVGVGLPEEVLNRYPH-----ELSGGQRQ 152 (228)
T ss_pred HhccCCcH--------H----------HH--------------HHHHHHHHHHHCCCChhHhhCCch-----hcCHHHHH
Confidence 32211000 0 00 001123567888885 45666554 49999999
Q ss_pred hhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 152 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 152 Rv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
|++|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.+|++++|++|+++..|
T Consensus 153 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 153 RVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHD-LGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999999976558899997655 46778899999999999998765
No 443
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.97 E-value=4.3e-31 Score=297.26 Aligned_cols=198 Identities=22% Similarity=0.350 Sum_probs=154.9
Q ss_pred ceeEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCc
Q 000773 692 PLAMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGF 771 (1293)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~ 771 (1293)
+..++++|+++. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|
T Consensus 37 ~~~l~i~nls~~---------------~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p--~~G~I~i~g- 98 (282)
T cd03291 37 DNNLFFSNLCLV---------------GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEP--SEGKIKHSG- 98 (282)
T ss_pred CCeEEEEEEEEe---------------cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECC-
Confidence 345788888762 13599999999999999999999999999999999998763 479999987
Q ss_pred cCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCC
Q 000773 772 PKKQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDA-------IVGLPGV 844 (1293)
Q Consensus 772 ~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~ 844 (1293)
.++|++|++.+++. ||+||+.+... .... .+.+.++.+++.+..+. .++. ..
T Consensus 99 ---------~i~yv~q~~~l~~~-tv~enl~~~~~------~~~~----~~~~~l~~~~l~~~l~~~~~~~~~~~~~-~~ 157 (282)
T cd03291 99 ---------RISFSSQFSWIMPG-TIKENIIFGVS------YDEY----RYKSVVKACQLEEDITKFPEKDNTVLGE-GG 157 (282)
T ss_pred ---------EEEEEeCccccccc-CHHHHhhcccc------cCHH----HHHHHHHHhCCHHHHHhccccccceecC-CC
Confidence 38999999988775 99999976321 1111 12334444454332221 2211 23
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHH-HHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 845 TGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV-RNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 845 ~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l-~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.+ +++. ++.|||+++|+++ ....+|++++|.+
T Consensus 158 ~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~-~~~tIiiisH~~~--~~~~~d~i~~l~~- 233 (282)
T cd03291 158 ITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLM-ANKTRILVTSKME--HLKKADKILILHE- 233 (282)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhh-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999998865 5554 4799999999975 3467999999975
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|++++.|+.
T Consensus 234 G~i~~~g~~ 242 (282)
T cd03291 234 GSSYFYGTF 242 (282)
T ss_pred CEEEEECCH
Confidence 899998885
No 444
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=299.72 Aligned_cols=186 Identities=26% Similarity=0.362 Sum_probs=153.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ...++|++|++.+++.+||+||+.++....+..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~-- 101 (255)
T PRK11248 29 LLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVE-- 101 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHHHHHhHHHHcCCC--
Confidence 47999999999999999999999987 99999999887532 235899999998888899999998764321100
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
.. +....++++++.+||.+..++.++ .||||||||++||+||+
T Consensus 102 ------------------~~--------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qrl~laral~ 144 (255)
T PRK11248 102 ------------------KM--------------QRLEIAHQMLKKVGLEGAEKRYIW-----QLSGGQRQRVGIARALA 144 (255)
T ss_pred ------------------HH--------------HHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHHHHHHHHHh
Confidence 00 001235668899999877776664 49999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEec--CCeEEEEcChh
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLS--EGQIVYQGPRE 231 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~--~G~i~~~G~~~ 231 (1293)
.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.| ..+++.+.||++++|+ +|+++..++.+
T Consensus 145 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH-~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 145 ANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITH-DIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 9999999999999999999999999999986556889988755 5568889999999998 59999887653
No 445
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=1.1e-31 Score=296.88 Aligned_cols=187 Identities=25% Similarity=0.342 Sum_probs=152.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++.....
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (230)
T TIGR03410 28 VTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP 104 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC
Confidence 47999999999999999999999987 999999998865432 13468999999999999999999988654211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhC-CccccCcccCCCcccccccccchhhHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILG-LDICKDTIVGDEMNRGISGGQKKRVTT 155 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1293)
.. .+...+++++.++ +.+..++.++ .||||||||++|
T Consensus 105 ~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~~~-----~LS~G~~qrv~l 142 (230)
T TIGR03410 105 RR-------------------------------------SRKIPDEIYELFPVLKEMLGRRGG-----DLSGGQQQQLAI 142 (230)
T ss_pred cc-------------------------------------hHHHHHHHHHHHHhHHHHhhCChh-----hCCHHHHHHHHH
Confidence 00 0001233455555 4555555554 499999999999
Q ss_pred HHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 156 GEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 156 a~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
|+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|+++|+ .+++.+.+|++++|++|++++.|+.+++
T Consensus 143 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 143 ARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQY-LDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCC-HHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999999999999999876557899987555 5678889999999999999999998775
No 446
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=99.97 E-value=1.7e-31 Score=335.86 Aligned_cols=212 Identities=25% Similarity=0.387 Sum_probs=172.8
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+.. +++.+|+|+|++++|||.++|+||||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 337 ~i~~~~v~f~y~~~----------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p--~~G~I~i~g~~i 404 (576)
T TIGR02204 337 EIEFEQVNFAYPAR----------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDP--QSGRILLDGVDL 404 (576)
T ss_pred eEEEEEEEEECCCC----------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEEH
Confidence 58899998875321 124699999999999999999999999999999999998763 479999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.++|+||++.+++ .|++||+.++. + ..+++ .++++++..|+.+. .|+.+++ .
T Consensus 405 ~~~~~~~~~~~i~~~~Q~~~lf~-~Ti~~Ni~~~~----~-~~~~~----~~~~~l~~~~l~~~i~~l~~gl~t~i~~-~ 473 (576)
T TIGR02204 405 RQLDPAELRARMALVPQDPVLFA-ASVMENIRYGR----P-DATDE----EVEAAARAAHAHEFISALPEGYDTYLGE-R 473 (576)
T ss_pred HhcCHHHHHHhceEEccCCcccc-ccHHHHHhcCC----C-CCCHH----HHHHHHHHcCcHHHHHhCCCCCCceeCC-C
Confidence 43 345678999999998875 59999997631 1 12222 25667777776543 2444543 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecC
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 923 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~ 923 (1293)
...||||||||++||||++++|++|+||||||+||+.+++.+++.|+++. +++|+|++||++ +....+|+++.|++
T Consensus 474 g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~-~~~t~IiitH~~--~~~~~~d~vi~l~~- 549 (576)
T TIGR02204 474 GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM-KGRTTLIIAHRL--ATVLKADRIVVMDQ- 549 (576)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh-CCCEEEEEecch--HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999985 489999999996 45678999999985
Q ss_pred cEEEEeCCC
Q 000773 924 GQVIYSGPL 932 (1293)
Q Consensus 924 G~~~~~g~~ 932 (1293)
|+++..|+.
T Consensus 550 g~~~~~g~~ 558 (576)
T TIGR02204 550 GRIVAQGTH 558 (576)
T ss_pred CEEEeeecH
Confidence 899998885
No 447
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=99.97 E-value=5.5e-31 Score=331.35 Aligned_cols=218 Identities=22% Similarity=0.362 Sum_probs=181.8
Q ss_pred EEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCC
Q 000773 695 MSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKK 774 (1293)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~ 774 (1293)
++++|+++..+.. .+.+.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|++.+||.++.
T Consensus 5 l~~~nl~~~y~~~---------~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~i~ 73 (648)
T PRK10535 5 LELKDIRRSYPSG---------EEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKP--TSGTYRVAGQDVA 73 (648)
T ss_pred EEEeeEEEEeCCC---------CCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcC
Confidence 6777877654210 1124699999999999999999999999999999999998763 4799999998764
Q ss_pred hh---c----ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000773 775 QE---T----FARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGL 847 (1293)
Q Consensus 775 ~~---~----~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 847 (1293)
.. . .++.++|++|++.+++.+|+.||+.+..... ....++..+++.++++.+|+.+..|+..+ .|
T Consensus 74 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~-----~L 145 (648)
T PRK10535 74 TLDADALAQLRREHFGFIFQRYHLLSHLTAAQNVEVPAVYA---GLERKQRLLRAQELLQRLGLEDRVEYQPS-----QL 145 (648)
T ss_pred cCCHHHHHHHHhccEEEEeCCcccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhhhcCCcc-----cC
Confidence 31 1 2457999999999999999999998754322 12334445568899999999887777654 79
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEE
Q 000773 848 SIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI 927 (1293)
Q Consensus 848 SgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~ 927 (1293)
|||||||++|||+|+.+|++|+|||||+|||+.+++.+.+.|++++++|+|+|+++|+++ ..+.+|++++|.+ |+++
T Consensus 146 S~Gq~qrv~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~--~~~~~d~i~~l~~-G~i~ 222 (648)
T PRK10535 146 SGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQ--VAAQAERVIEIRD-GEIV 222 (648)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHH--HHHhCCEEEEEEC-CEEE
Confidence 999999999999999999999999999999999999999999999877999999999964 5567999999985 8999
Q ss_pred EeCCCCC
Q 000773 928 YSGPLGR 934 (1293)
Q Consensus 928 ~~g~~~~ 934 (1293)
+.|+.++
T Consensus 223 ~~g~~~~ 229 (648)
T PRK10535 223 RNPPAQE 229 (648)
T ss_pred eecCccc
Confidence 9998753
No 448
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=99.97 E-value=2.3e-31 Score=289.16 Aligned_cols=186 Identities=19% Similarity=0.211 Sum_probs=150.2
Q ss_pred cccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEE-EcCccCChhcccceEEEEccCCCCCCCCCHHHH
Q 000773 722 LLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIR-ISGFPKKQETFARISGYCEQNDIHSPQVTVKES 800 (1293)
Q Consensus 722 iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~-~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~ 800 (1293)
+|+||||++++||+++|+||||||||||+++|+|..++ .+|+|. ++|... .+.+++.+++.+|++||
T Consensus 2 vl~~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~--~sG~i~~~~~~~~----------~~~~~~~l~~~ltv~en 69 (213)
T PRK15177 2 VLDKTDFVMGYHEHIGILAAPGSGKTTLTRLLCGLDAP--DEGDFIGLRGDAL----------PLGANSFILPGLTGEEN 69 (213)
T ss_pred eeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCccC--CCCCEEEecCcee----------ccccccccCCcCcHHHH
Confidence 79999999999999999999999999999999998653 479986 766432 12345678899999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000773 801 LIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 880 (1293)
Q Consensus 801 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~ 880 (1293)
+.+...... ...++. .+++.+.+++....++.++ .||||||||++||+||+.+|++++|||||+++|+.
T Consensus 70 l~~~~~~~~---~~~~~~---~~~~~~~~~l~~~~~~~~~-----~lS~G~~qrv~la~al~~~p~llllDEP~~~lD~~ 138 (213)
T PRK15177 70 ARMMASLYG---LDGDEF---SHFCYQLTQLEQCYTDRVS-----EYSVTMKTHLAFAINLLLPCRLYIADGKLYTGDNA 138 (213)
T ss_pred HHHHHHHcC---CCHHHH---HHHHHHHhChhHHhhchHh-----hcCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHH
Confidence 988654331 222222 2344556777777777655 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCCCC
Q 000773 881 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLG 933 (1293)
Q Consensus 881 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~~~ 933 (1293)
++..+.+.+.+..+ ++|+|+++|+++ .+...+|++++|.+ |++++.|+.+
T Consensus 139 ~~~~~~~~l~~~~~-~~~ii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 188 (213)
T PRK15177 139 TQLRMQAALACQLQ-QKGLIVLTHNPR-LIKEHCHAFGVLLH-GKITMCEDLA 188 (213)
T ss_pred HHHHHHHHHHHHhh-CCcEEEEECCHH-HHHHhcCeeEEEEC-CeEEEeCCHH
Confidence 99999998865433 478999999975 56678999999985 8999999874
No 449
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.97 E-value=1.3e-31 Score=308.87 Aligned_cols=199 Identities=21% Similarity=0.241 Sum_probs=159.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-------cceEEeecccc--ccCCCCCHHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-------QKTSAYISQND--VHVGEMTVKETLDFS 71 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTV~e~l~f~ 71 (1293)
+++|+|+||||||||+++|+|+++|+...+|+|.++|.++..... ++.++||+|++ .+.+.+|+.+++.+.
T Consensus 44 ~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~ 123 (330)
T PRK09473 44 TLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 123 (330)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHH
Confidence 479999999999999999999998742348999999998764321 24699999997 688899999999765
Q ss_pred hhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccch
Q 000773 72 ARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKK 151 (1293)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrq 151 (1293)
........ .. +....+.++++.+||++..+. + +.++++|||||||
T Consensus 124 ~~~~~~~~-------------------~~--------------~~~~~~~~~L~~vgL~~~~~~-~-~~~p~~LSgG~~Q 168 (330)
T PRK09473 124 LMLHKGMS-------------------KA--------------EAFEESVRMLDAVKMPEARKR-M-KMYPHEFSGGMRQ 168 (330)
T ss_pred HHHhcCCC-------------------HH--------------HHHHHHHHHHHHcCCCChHHH-h-cCCcccCCHHHHH
Confidence 43211000 00 011235667888998753322 2 2456789999999
Q ss_pred hhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 152 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 152 Rv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
||+||+||+.+|+++++||||+|||+.++.++++.|+++.++.+.|+|+++ |+.+.+.+++|||++|++|++++.|+.+
T Consensus 169 Rv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iT-Hdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 169 RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMIT-HDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEE-CCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999999876788999864 5566888899999999999999999998
Q ss_pred hHHH
Q 000773 232 RVLE 235 (1293)
Q Consensus 232 ~~~~ 235 (1293)
++.+
T Consensus 248 ~i~~ 251 (330)
T PRK09473 248 DVFY 251 (330)
T ss_pred HHHh
Confidence 8753
No 450
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.1e-31 Score=298.84 Aligned_cols=191 Identities=19% Similarity=0.360 Sum_probs=156.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+..+...
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 107 (241)
T PRK10895 31 IVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD 107 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc
Confidence 47999999999999999999999887 999999998875432 23568999999988988999999987543210
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. . ... +.+..++++++.+||.+..++.++ .||||||||++||
T Consensus 108 ~---------~----------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la 149 (241)
T PRK10895 108 D---------L----------SAE--------------QREDRANELMEEFHIEHLRDSMGQ-----SLSGGERRRVEIA 149 (241)
T ss_pred c---------c----------CHH--------------HHHHHHHHHHHHcCCHHHhhcchh-----hCCHHHHHHHHHH
Confidence 0 0 000 011234667889999876666654 5999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+|++.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|+ .+++.+.+|++++|++|++++.|+++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~sH~-~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHN-VRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEcC-HHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 999999999999999999999999999999999865 58899987655 46788999999999999999999987764
No 451
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1e-31 Score=304.20 Aligned_cols=190 Identities=25% Similarity=0.372 Sum_probs=157.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++. .++..||.||+.++....+
T Consensus 35 ~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~ 111 (279)
T PRK13635 35 WVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIG 111 (279)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCC
Confidence 47999999999999999999999987 999999999876432 2456899999973 6667899999988654221
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. +.. +.++.++.+++.+||++..++.++. ||||||||++||
T Consensus 112 ~--------------------~~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~-----LS~G~~qrv~la 152 (279)
T PRK13635 112 V--------------------PRE--------------EMVERVDQALRQVGMEDFLNREPHR-----LSGGQKQRVAIA 152 (279)
T ss_pred C--------------------CHH--------------HHHHHHHHHHHHcCChhhhhCCccc-----CCHHHHHHHHHH
Confidence 0 000 0012356688999998888877754 999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||+.+|++++|||||+|||+.++..+++.|++++++.++|+|++.|++ +++. .+|++++|++|++++.|+.+++.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~-~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDL-DEAA-QADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCH-HHHH-cCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999999876689999986665 4565 59999999999999999988765
No 452
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.97 E-value=1.7e-31 Score=291.39 Aligned_cols=186 Identities=22% Similarity=0.314 Sum_probs=153.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-cccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|+.||+.+....... .
T Consensus 26 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~~-~ 101 (213)
T TIGR01277 26 IVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGLK-L 101 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHHHhHhhccCC-c
Confidence 47999999999999999999999987 99999999887542 2345689999999999999999999875321100 0
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
. . ..+..++++++.+||++..++.+. .||||||||++|||++
T Consensus 102 ~-------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral 143 (213)
T TIGR01277 102 N-------------------A--------------EQQEKVVDAAQQVGIADYLDRLPE-----QLSGGQRQRVALARCL 143 (213)
T ss_pred c-------------------H--------------HHHHHHHHHHHHcCcHHHhhCCcc-----cCCHHHHHHHHHHHHH
Confidence 0 0 001234567899999877777665 4999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcC
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGP 229 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~ 229 (1293)
+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ ..++.+.+|++++|++|++++.|+
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~-~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHH-LSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999999876558899987555 567788999999999999998875
No 453
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.3e-32 Score=305.42 Aligned_cols=192 Identities=28% Similarity=0.379 Sum_probs=157.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCC--c---cccceEEeeccccc-cCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNE--F---VPQKTSAYISQNDV-HVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~--~---~~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++. .+...||+||+.++...
T Consensus 34 ~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 110 (283)
T PRK13636 34 VTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVN 110 (283)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHH
Confidence 47999999999999999999999987 9999999988741 1 23457999999863 33457999999886432
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+. +.. +.+..++.+++.+||.+..++.+++ ||||||||++
T Consensus 111 ~~~--------------------~~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~-----LS~G~~qrl~ 151 (283)
T PRK13636 111 LKL--------------------PED--------------EVRKRVDNALKRTGIEHLKDKPTHC-----LSFGQKKRVA 151 (283)
T ss_pred cCC--------------------CHH--------------HHHHHHHHHHHHCCChhhhhCCccc-----CCHHHHHHHH
Confidence 110 000 0112356688999998877777654 9999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||||+.+|++++|||||+|||+.++..+.+.|++++++.|+|++++.| ..+++.+.|||+++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH-~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATH-DIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEec-CHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998766889999755 556788899999999999999999998875
Q ss_pred H
Q 000773 235 E 235 (1293)
Q Consensus 235 ~ 235 (1293)
+
T Consensus 231 ~ 231 (283)
T PRK13636 231 A 231 (283)
T ss_pred c
Confidence 3
No 454
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=99.97 E-value=1.6e-31 Score=332.17 Aligned_cols=200 Identities=28% Similarity=0.452 Sum_probs=164.5
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|++++.+. +++++|+|+|++++|||.+||+||||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 320 ~i~~~~v~f~y~~-----------~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~I~~~g~~i 386 (529)
T TIGR02857 320 SLEFSGLSVAYPG-----------RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDP--TEGSIAVNGVPL 386 (529)
T ss_pred eEEEEEEEEECCC-----------CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEeh
Confidence 5889999887632 124699999999999999999999999999999999998764 479999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESL-------KDAIVGLPG 843 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 843 (1293)
++ ..+++.++||+|++.+++ .|++||+.++. ...+++ .++++++..++.+. .|+.+|. .
T Consensus 387 ~~~~~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~~~~----~i~~a~~~~~l~~~i~~lp~Gldt~v~e-~ 455 (529)
T TIGR02857 387 ADADADSWRDQIAWVPQHPFLFA-GTIAENIRLAR-----PDASDA----EIRRALERAGLDEFVAALPQGLDTLIGE-G 455 (529)
T ss_pred hhCCHHHHHhheEEEcCCCcccC-cCHHHHHhccC-----CCCCHH----HHHHHHHHcCcHHHHHhCcccccchhcc-c
Confidence 43 456778999999999886 59999997642 112222 25667777776543 3566664 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhhee
Q 000773 844 VTGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 920 (1293)
Q Consensus 844 ~~~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 920 (1293)
...||||||||++|||||+++|++++||||||+||+.+++.+.+.++++. +++|+|+++|++ +..+.+|++++|
T Consensus 456 g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~--~~~~~~d~i~~l 529 (529)
T TIGR02857 456 GAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRL--ALAERADRIVVL 529 (529)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCH--HHHHhCCEEEeC
Confidence 45799999999999999999999999999999999999999999999875 589999999996 456789998875
No 455
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=1.2e-31 Score=260.09 Aligned_cols=181 Identities=24% Similarity=0.344 Sum_probs=155.3
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 2 TLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 2 ~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
++|+|||||||||||-+++|+..|+ +|+|.+.|+++.+.. ..+.+|+|+|...++|++|..||+...+++
T Consensus 39 vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL 115 (228)
T COG4181 39 VAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLEL 115 (228)
T ss_pred EEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhh
Confidence 6899999999999999999999988 999999999886543 236789999999999999999999987776
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
++...+ +......+.|+.+||.+-.+. ++.+|||||+|||+
T Consensus 116 ~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~H-----yP~qLSGGEQQRVA 156 (228)
T COG4181 116 RGESSA----------------------------------DSRAGAKALLEAVGLGKRLTH-----YPAQLSGGEQQRVA 156 (228)
T ss_pred cCCccc----------------------------------cHHHHHHHHHHHhCccccccc-----CccccCchHHHHHH
Confidence 542110 112234567899999876554 45679999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEE
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVY 226 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~ 226 (1293)
||||++..|+|||-||||..||..+...|.++|-.+.+++|.|.++++|+| .....|||.+-|.+|+++.
T Consensus 157 iARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~--~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 157 LARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDP--QLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCH--HHHHhhhheeeeecceecc
Confidence 999999999999999999999999999999999999999999999988876 4778999999999999874
No 456
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.6e-31 Score=307.69 Aligned_cols=193 Identities=19% Similarity=0.207 Sum_probs=158.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeecccc--ccCCCCCHHHHHHHHh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQND--VHVGEMTVKETLDFSA 72 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTV~e~l~f~~ 72 (1293)
+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.... .++.++||+|++ .+.+.+||.+++....
T Consensus 43 ~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~ 119 (327)
T PRK11308 43 TLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPL 119 (327)
T ss_pred EEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHH
Confidence 47999999999999999999999887 899999998875432 245799999997 5888899999997754
Q ss_pred hccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCcc-ccCcccCCCcccccccccch
Q 000773 73 RCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDI-CKDTIVGDEMNRGISGGQKK 151 (1293)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrq 151 (1293)
...... ... +.+..+.++++.+||.+ ..++.+ ..|||||||
T Consensus 120 ~~~~~~-------------------~~~--------------~~~~~~~~~l~~~gL~~~~~~~~p-----~~LSgGq~Q 161 (327)
T PRK11308 120 LINTSL-------------------SAA--------------ERREKALAMMAKVGLRPEHYDRYP-----HMFSGGQRQ 161 (327)
T ss_pred HHccCC-------------------CHH--------------HHHHHHHHHHHHCCCChHHhcCCC-----ccCCHHHHH
Confidence 321100 000 01223567899999963 556555 459999999
Q ss_pred hhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 152 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 152 Rv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
||+|||||+.+|++|++||||+|||..++..+++.|+++.++.|.|+|++ +|+...+.+++|+|++|++|++++.|+.+
T Consensus 162 Rv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~i-THdl~~~~~~adrv~vm~~G~ive~g~~~ 240 (327)
T PRK11308 162 RIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFI-SHDLSVVEHIADEVMVMYLGRCVEKGTKE 240 (327)
T ss_pred HHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999987678899886 55667888899999999999999999998
Q ss_pred hHHH
Q 000773 232 RVLE 235 (1293)
Q Consensus 232 ~~~~ 235 (1293)
++.+
T Consensus 241 ~~~~ 244 (327)
T PRK11308 241 QIFN 244 (327)
T ss_pred HHhc
Confidence 8754
No 457
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=7.3e-32 Score=276.98 Aligned_cols=193 Identities=26% Similarity=0.347 Sum_probs=169.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
|.+++|||||||||++++|.|+++|+ +|+|+++|.+++.. .+.++||.|.+.-+++.+||.|.|.|-+++++...
T Consensus 30 i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~~- 104 (300)
T COG4152 30 IFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELKGMPK- 104 (300)
T ss_pred EEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhh-hhhhcccChhhhccCccCcHHHHHHHHHHhcCCcH-
Confidence 57899999999999999999999998 99999999988654 34579999999999999999999999999877421
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
. +.+...+.+|+.+++......+|- .||.|++|++.+..+++
T Consensus 105 -------------------~--------------e~~~~~~~wLer~~i~~~~~~kIk-----~LSKGnqQKIQfisavi 146 (300)
T COG4152 105 -------------------A--------------EIQKKLQAWLERLEIVGKKTKKIK-----ELSKGNQQKIQFISAVI 146 (300)
T ss_pred -------------------H--------------HHHHHHHHHHHhccccccccchHH-----HhhhhhhHHHHHHHHHh
Confidence 1 112345678999999887777664 59999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHHHHH
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLEFFE 238 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~~f~ 238 (1293)
++|++++||||+|||||.+.+.+-+.+.++.. +|.|||.+. |-+..+.++||++++|++|+.|.+|+.+++...|+
T Consensus 147 HePeLlILDEPFSGLDPVN~elLk~~I~~lk~-~GatIifSs-H~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~G 222 (300)
T COG4152 147 HEPELLILDEPFSGLDPVNVELLKDAIFELKE-EGATIIFSS-HRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFG 222 (300)
T ss_pred cCCCEEEecCCccCCChhhHHHHHHHHHHHHh-cCCEEEEec-chHHHHHHHhhhhheecCCceEEeccHHHHHHhcC
Confidence 99999999999999999999999999999865 699999985 56789999999999999999999999999987654
No 458
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=305.13 Aligned_cols=190 Identities=23% Similarity=0.355 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeeccccc-cCCCCCHHHHHHHHh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQNDV-HVGEMTVKETLDFSA 72 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~ 72 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+..+||.||+.++.
T Consensus 35 ~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~ 111 (287)
T PRK13641 35 FVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGP 111 (287)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHH
Confidence 47999999999999999999999988 99999999877431 12356899999862 233579999998865
Q ss_pred hccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccch
Q 000773 73 RCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQKK 151 (1293)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1293)
...... .. +....++++++.+||. +..++.+++ |||||||
T Consensus 112 ~~~~~~--------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~~-----LSgGq~q 152 (287)
T PRK13641 112 KNFGFS--------------------ED--------------EAKEKALKWLKKVGLSEDLISKSPFE-----LSGGQMR 152 (287)
T ss_pred HHcCCC--------------------HH--------------HHHHHHHHHHHHcCCChhHhhCCccc-----CCHHHHH
Confidence 321100 00 0012356688999997 566776654 9999999
Q ss_pred hhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 152 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 152 Rv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
|++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .|+|+|++. |..+++.+.||++++|++|++++.|+++
T Consensus 153 rl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvlivs-H~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 153 RVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILVT-HNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999865 588998864 5567888999999999999999999988
Q ss_pred hHH
Q 000773 232 RVL 234 (1293)
Q Consensus 232 ~~~ 234 (1293)
++.
T Consensus 231 ~~~ 233 (287)
T PRK13641 231 EIF 233 (287)
T ss_pred HHh
Confidence 764
No 459
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=6e-32 Score=340.33 Aligned_cols=192 Identities=27% Similarity=0.384 Sum_probs=154.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
.+||+||||||||||+++|+|++ |+ +|+|.+||.++.+.. .++.++||+|++++|.. |++|||.++....
T Consensus 378 ~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~~~~-- 450 (588)
T PRK11174 378 RIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGNPDA-- 450 (588)
T ss_pred EEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCCCCC--
Confidence 37999999999999999999999 76 899999999887643 35789999999998876 9999999863210
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
.+.++.+..+.+ ..++.++ .|++..||.+|+ .+..||||||||++|||
T Consensus 451 --------------------~~eei~~al~~a---------~l~~~i~--~lp~G~dT~vge-~G~~LSGGQrQRialAR 498 (588)
T PRK11174 451 --------------------SDEQLQQALENA---------WVSEFLP--LLPQGLDTPIGD-QAAGLSVGQAQRLALAR 498 (588)
T ss_pred --------------------CHHHHHHHHHHh---------CHHHHHH--hccccccccccc-CCCCCCHHHHHHHHHHH
Confidence 001111111111 0111222 356778999996 46779999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|++++|+|++||||||+||+.++..+.+.|+++. +++|+|++.|++ +..+.+|+|++|++|++++.|+++++.+
T Consensus 499 All~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiItHrl--~~i~~aD~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 499 ALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVTHQL--EDLAQWDQIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEecCh--HHHHhCCEEEEEeCCeEeecCCHHHHHh
Confidence 9999999999999999999999999999999875 478999988887 4667899999999999999999999864
No 460
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=99.97 E-value=1.2e-31 Score=293.18 Aligned_cols=180 Identities=24% Similarity=0.353 Sum_probs=148.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~ 105 (214)
T cd03292 29 FVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEV 105 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998775421 235689999999999999999999886542
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. . . +.++.++++++.+||++..++.++ +||||||||++
T Consensus 106 ~~~~--~------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 146 (214)
T cd03292 106 TGVP--P------------------R--------------EIRKRVPAALELVGLSHKHRALPA-----ELSGGEQQRVA 146 (214)
T ss_pred cCCC--H------------------H--------------HHHHHHHHHHHHcCCHHHhhCChh-----hcCHHHHHHHH
Confidence 2100 0 0 001234567888999887777665 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQI 224 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i 224 (1293)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.|+ .+++.+.+|++++|++|++
T Consensus 147 laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tiiivtH~-~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 147 IARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AGTTVVVATHA-KELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999865 47898887555 4677788999999999974
No 461
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.6e-31 Score=302.69 Aligned_cols=191 Identities=26% Similarity=0.395 Sum_probs=156.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+...||.||+.++....+
T Consensus 32 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~ 108 (277)
T PRK13652 32 RIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLG 108 (277)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 999999998775422 2356899999963 3446799999987643211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
.. .. +.++.++.+++.+||.+..++.+++ ||||||||++||
T Consensus 109 ~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Gq~qrl~la 149 (277)
T PRK13652 109 LD--------------------EE--------------TVAHRVSSALHMLGLEELRDRVPHH-----LSGGEKKRVAIA 149 (277)
T ss_pred CC--------------------HH--------------HHHHHHHHHHHHCCChhHhcCCccc-----CCHHHHHHHHHH
Confidence 00 00 0112356688999998877877754 999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ .+++.+.|||+++|++|++++.|+++++.
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~-~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQ-LDLVPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHHhCCEEEEEECCeEEEECCHHHHh
Confidence 999999999999999999999999999999999977558899987555 56888999999999999999999998875
No 462
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.8e-31 Score=300.00 Aligned_cols=206 Identities=22% Similarity=0.288 Sum_probs=158.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .+..++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 109 (255)
T PRK11300 33 IVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQL 109 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccc
Confidence 47999999999999999999999987 999999998875432 12347899999999999999999998643110
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
... ........ ...... ..+....++..++.+||.+..++.+++ ||||||||++||
T Consensus 110 ~~~---~~~~~~~~----~~~~~~------------~~~~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrv~la 165 (255)
T PRK11300 110 KTG---LFSGLLKT----PAFRRA------------ESEALDRAATWLERVGLLEHANRQAGN-----LAYGQQRRLEIA 165 (255)
T ss_pred cch---hhhhhccc----cccccc------------hhHHHHHHHHHHHhCChhhhhhCChhh-----CCHHHHHHHHHH
Confidence 000 00000000 000000 001112356678899998777777654 999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|+++|+ .+++.+.||++++|++|++++.|+++++.
T Consensus 166 ~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~-~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 166 RCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHD-MKLVMGISDRIYVVNQGTPLANGTPEEIR 242 (255)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCC-HHHHHHhCCEEEEEECCeEEecCCHHHHh
Confidence 999999999999999999999999999999999876558899997554 56888999999999999999999987753
No 463
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.97 E-value=2e-31 Score=298.99 Aligned_cols=191 Identities=27% Similarity=0.439 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++......
T Consensus 30 ~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 106 (258)
T PRK13548 30 VVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGL 106 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccCC
Confidence 47999999999999999999999887 999999998765422 235689999998887889999999875431110
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
. . . +.+..++.+++.+||.+..++.+++ |||||||||+||+
T Consensus 107 -~-~------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgGe~qrv~la~ 147 (258)
T PRK13548 107 -S-R------------------A--------------EDDALVAAALAQVDLAHLAGRDYPQ-----LSGGEQQRVQLAR 147 (258)
T ss_pred -C-c------------------H--------------HHHHHHHHHHHHcCCHhHhcCCccc-----CCHHHHHHHHHHH
Confidence 0 0 0 0012245678899998877777754 9999999999999
Q ss_pred HHh------cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 158 MIV------GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 158 al~------~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
||+ .+|++++|||||+|||+.++..+.+.|+++++++++|+|++.| +..++.+.+|++++|++|++++.|+++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH-~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLH-DLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEEC-CHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 5999999999999999999999999999987456889988755 456788899999999999999999987
Q ss_pred hHH
Q 000773 232 RVL 234 (1293)
Q Consensus 232 ~~~ 234 (1293)
++.
T Consensus 227 ~~~ 229 (258)
T PRK13548 227 EVL 229 (258)
T ss_pred HHh
Confidence 764
No 464
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.97 E-value=2.2e-31 Score=300.01 Aligned_cols=192 Identities=22% Similarity=0.296 Sum_probs=155.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeecccc--ccCCCCCHHHHHHHHh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQND--VHVGEMTVKETLDFSA 72 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTV~e~l~f~~ 72 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+.+.+||+|++.+..
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 115 (265)
T TIGR02769 39 TVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPL 115 (265)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999987 999999998875432 235699999996 4667899999998754
Q ss_pred hccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccch
Q 000773 73 RCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQKK 151 (1293)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1293)
..... . ... +.+..++++++.+||. +..++.++ .|||||||
T Consensus 116 ~~~~~---------~----------~~~--------------~~~~~~~~~l~~~gl~~~~~~~~~~-----~LSgGe~q 157 (265)
T TIGR02769 116 RHLTS---------L----------DES--------------EQKARIAELLDMVGLRSEDADKLPR-----QLSGGQLQ 157 (265)
T ss_pred HHhcC---------C----------CHH--------------HHHHHHHHHHHHcCCChhhhhCChh-----hCCHHHHH
Confidence 31100 0 000 0112356678999996 56666554 59999999
Q ss_pred hhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChh
Q 000773 152 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRE 231 (1293)
Q Consensus 152 Rv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~ 231 (1293)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.| ..+.+.+.+|++++|++|++++.|+.+
T Consensus 158 rv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH-~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 158 RINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITH-DLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeC-CHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 9999999999999999999999999999999999999987656889998755 456788899999999999999999988
Q ss_pred hHH
Q 000773 232 RVL 234 (1293)
Q Consensus 232 ~~~ 234 (1293)
++.
T Consensus 237 ~~~ 239 (265)
T TIGR02769 237 QLL 239 (265)
T ss_pred HHc
Confidence 764
No 465
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.97 E-value=2.1e-31 Score=298.58 Aligned_cols=191 Identities=23% Similarity=0.345 Sum_probs=156.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc----------------cccceEEeeccccccCCCCCH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF----------------VPQKTSAYISQNDVHVGEMTV 64 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~~~yv~Q~~~~~~~lTV 64 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++..||
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 104 (252)
T TIGR03005 28 KVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTV 104 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcccCCCCcH
Confidence 47999999999999999999999987 99999999876432 124568999999999999999
Q ss_pred HHHHHHHhhcc-CCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCccc
Q 000773 65 KETLDFSARCL-GVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNR 143 (1293)
Q Consensus 65 ~e~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 143 (1293)
.||+.++.... +. ...+ .+..+++.++.+|+.+..++.+.
T Consensus 105 ~~nl~~~~~~~~~~--------------------~~~~--------------~~~~~~~~l~~~gl~~~~~~~~~----- 145 (252)
T TIGR03005 105 LDNVTEAPVLVLGM--------------------ARAE--------------AEKRAMELLDMVGLADKADHMPA----- 145 (252)
T ss_pred HHHHHHHHHHhcCC--------------------CHHH--------------HHHHHHHHHHHcCChhHhhcChh-----
Confidence 99998753210 00 0000 01124567888999877666554
Q ss_pred ccccccchhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCe
Q 000773 144 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQ 223 (1293)
Q Consensus 144 ~LSGGqrqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~ 223 (1293)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+++||+++|++|+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~-~~~~~~~~d~i~~l~~G~ 224 (252)
T TIGR03005 146 QLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHE-MGFAREFADRVCFFDKGR 224 (252)
T ss_pred hcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCC-HHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999877568899997655 567888999999999999
Q ss_pred EEEEcChhhHH
Q 000773 224 IVYQGPRERVL 234 (1293)
Q Consensus 224 i~~~G~~~~~~ 234 (1293)
+++.|+.+++.
T Consensus 225 i~~~g~~~~~~ 235 (252)
T TIGR03005 225 IVEQGKPDEIF 235 (252)
T ss_pred EEEeCCHHHHh
Confidence 99999987764
No 466
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=99.97 E-value=1.6e-31 Score=292.11 Aligned_cols=179 Identities=25% Similarity=0.374 Sum_probs=147.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (214)
T TIGR02673 30 FLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEV 106 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998875422 235689999999989899999999886542
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. ..+ .+..++++++.+||++..++.+. .||||||||++
T Consensus 107 ~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~ 147 (214)
T TIGR02673 107 RGKK--------------------ERE--------------IQRRVGAALRQVGLEHKADAFPE-----QLSGGEQQRVA 147 (214)
T ss_pred cCCC--------------------HHH--------------HHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHH
Confidence 2100 000 01234667889999876676665 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCe
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQ 223 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~ 223 (1293)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.|+ .+++.++||++++|++|+
T Consensus 148 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~-~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 148 IARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVATHD-LSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999999865 47898887655 568888999999999985
No 467
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.97 E-value=2.2e-31 Score=299.04 Aligned_cols=190 Identities=22% Similarity=0.293 Sum_probs=154.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCC----------------ccccceEEeeccccccCCCCCH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNE----------------FVPQKTSAYISQNDVHVGEMTV 64 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~----------------~~~~~~~~yv~Q~~~~~~~lTV 64 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. ...++.++|++|++.+++.+||
T Consensus 33 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv 109 (257)
T PRK10619 33 VISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTV 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCCCcH
Confidence 47999999999999999999999987 8999999987642 0124568999999999999999
Q ss_pred HHHHHHHhh-ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCcccc-CcccCCCcc
Q 000773 65 KETLDFSAR-CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICK-DTIVGDEMN 142 (1293)
Q Consensus 65 ~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-~t~vg~~~~ 142 (1293)
+||+.++.. .... ... +.+..+.++++.+||.+.. ++.+
T Consensus 110 ~enl~~~~~~~~~~--------------------~~~--------------~~~~~~~~~l~~~gl~~~~~~~~~----- 150 (257)
T PRK10619 110 LENVMEAPIQVLGL--------------------SKQ--------------EARERAVKYLAKVGIDERAQGKYP----- 150 (257)
T ss_pred HHHHHHHHHHhCCC--------------------CHH--------------HHHHHHHHHHHHcCCChhhhhCCc-----
Confidence 999987542 1100 000 0112345678999997643 5444
Q ss_pred cccccccchhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCC
Q 000773 143 RGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEG 222 (1293)
Q Consensus 143 ~~LSGGqrqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G 222 (1293)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .|+|+|++.|+ ..++.+.|||+++|++|
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivsH~-~~~~~~~~d~i~~l~~G 228 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTHE-MGFARHVSSHVIFLHQG 228 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCC-HHHHHHhcCEEEEEECC
Confidence 45999999999999999999999999999999999999999999999875 58899887554 56788899999999999
Q ss_pred eEEEEcChhhHH
Q 000773 223 QIVYQGPRERVL 234 (1293)
Q Consensus 223 ~i~~~G~~~~~~ 234 (1293)
++++.|+++++.
T Consensus 229 ~i~~~~~~~~~~ 240 (257)
T PRK10619 229 KIEEEGAPEQLF 240 (257)
T ss_pred EEEEeCCHHHhh
Confidence 999999987764
No 468
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.7e-31 Score=296.63 Aligned_cols=188 Identities=23% Similarity=0.380 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 109 (237)
T PRK11614 33 IVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAE 109 (237)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhccC
Confidence 47999999999999999999999987 999999998875432 23568999999999998999999987542110
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHh-CCccccCcccCCCcccccccccchhhHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKIL-GLDICKDTIVGDEMNRGISGGQKKRVTT 155 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1293)
. ... +..++.+++.+ ++.+..++.+ ..||||||||++|
T Consensus 110 ---~----~~~-----------------------------~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G~~qrl~l 148 (237)
T PRK11614 110 ---R----DQF-----------------------------QERIKWVYELFPRLHERRIQRA-----GTMSGGEQQMLAI 148 (237)
T ss_pred ---h----hHH-----------------------------HHHHHHHHHHHHHHHHHHhCch-----hhCCHHHHHHHHH
Confidence 0 000 01123345555 3555455544 4599999999999
Q ss_pred HHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 156 GEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 156 a~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.| ..+++.+.+||+++|++|++++.|+++++.
T Consensus 149 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH-~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 149 GRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMTIFLVEQ-NANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred HHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-cHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 9999999999999999999999999999999999875 4889988755 456888999999999999999999988764
No 469
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=7.7e-32 Score=262.92 Aligned_cols=191 Identities=21% Similarity=0.286 Sum_probs=157.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----------------ccceEEeeccccccCCCCCH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----------------PQKTSAYISQNDVHVGEMTV 64 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----------------~~~~~~yv~Q~~~~~~~lTV 64 (1293)
++.|+|.|||||||+|++|.-+..|+ .|.|.+||+.+.... .+.+.++|+|+..++..+||
T Consensus 34 VisIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtv 110 (256)
T COG4598 34 VISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTV 110 (256)
T ss_pred EEEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHH
Confidence 46899999999999999999999888 999999998753211 12346899999999999999
Q ss_pred HHHHHHHhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccc
Q 000773 65 KETLDFSARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRG 144 (1293)
Q Consensus 65 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 144 (1293)
.||+.-+.... ...++ .+..+..+.+|...||.+.+|... ..
T Consensus 111 LeNViEaPvhV---------Lg~~k------------------------~ea~e~Ae~~L~kVGi~ek~~~YP-----~~ 152 (256)
T COG4598 111 LENVIEAPVHV---------LGVSK------------------------AEAIERAEKYLAKVGIAEKADAYP-----AH 152 (256)
T ss_pred HHHHHhcchHh---------hcCCH------------------------HHHHHHHHHHHHHhCchhhhhcCc-----cc
Confidence 99997543211 11111 112234577899999998877554 45
Q ss_pred cccccchhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000773 145 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQI 224 (1293)
Q Consensus 145 LSGGqrqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i 224 (1293)
|||||+||++|||||+.+|+++++|||||+|||.-.-++++.++++++ .|+|.+++ +|.+..+.+...+|+.|++|.|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAe-EgrTMv~V-THEM~FAR~Vss~v~fLh~G~i 230 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAE-EGRTMVVV-THEMGFARDVSSHVIFLHQGKI 230 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHH-hCCeEEEE-eeehhHHHhhhhheEEeeccee
Confidence 999999999999999999999999999999999999999999999997 48998886 5567788889999999999999
Q ss_pred EEEcChhhHH
Q 000773 225 VYQGPRERVL 234 (1293)
Q Consensus 225 ~~~G~~~~~~ 234 (1293)
-++|+++++.
T Consensus 231 EE~G~P~qvf 240 (256)
T COG4598 231 EEEGPPEQVF 240 (256)
T ss_pred cccCChHHHh
Confidence 9999999874
No 470
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.5e-31 Score=299.13 Aligned_cols=190 Identities=22% Similarity=0.281 Sum_probs=155.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++. +++..|+++|+.+.....+
T Consensus 37 ~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~ 113 (269)
T PRK13648 37 WTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHA 113 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcC
Confidence 47999999999999999999999987 999999998875422 2456899999974 6777899999988653211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
.. ..+ ....++.+++.+||.+..++.++ .||||||||++||
T Consensus 114 ~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la 154 (269)
T PRK13648 114 VP--------------------YDE--------------MHRRVSEALKQVDMLERADYEPN-----ALSGGQKQRVAIA 154 (269)
T ss_pred CC--------------------HHH--------------HHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHHHHH
Confidence 00 000 01234567899999887776664 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||++.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|++ .++.. +||+++|++|++++.|+++++.
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~-~~~~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDL-SEAME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCc-hHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999998765588999987765 45654 9999999999999999988764
No 471
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.4e-31 Score=295.59 Aligned_cols=186 Identities=20% Similarity=0.329 Sum_probs=152.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc---cccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF---VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++.+++ .||+||+.++.....
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~- 105 (241)
T PRK14250 31 IYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLKG- 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhcC-
Confidence 47999999999999999999999987 99999999876532 22456899999988876 699999976432110
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccchhhHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. .+..++.+++.+||+ +..++.++ .||||||||++||
T Consensus 106 -~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----~LS~G~~qrl~la 143 (241)
T PRK14250 106 -E------------------------------------KNVDVEYYLSIVGLNKEYATRDVK-----NLSGGEAQRVSIA 143 (241)
T ss_pred -c------------------------------------HHHHHHHHHHHcCCCHHHhhCCcc-----cCCHHHHHHHHHH
Confidence 0 001234578888996 45555544 5999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+|++.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.| +.+++.+.+|++++|++|+++..|+++++.
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH-~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 144 RTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITH-NMEQAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEec-cHHHHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999987655889988755 556788899999999999999999988764
No 472
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.97 E-value=3.8e-31 Score=290.88 Aligned_cols=183 Identities=26% Similarity=0.365 Sum_probs=153.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccCCCCCHHHHHHHHhhccCCCcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTR 80 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 80 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .+.++|++|++.+++.+|++||+.+.....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~~--- 100 (223)
T TIGR03740 28 VYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARENLKVHTTLLGL--- 100 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHHHHHHHHHHcCC---
Confidence 47999999999999999999999987 999999998765432 24689999999888889999999876432110
Q ss_pred hhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHHh
Q 000773 81 YELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMIV 160 (1293)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1293)
+ +..++.+++.+||++..|+.+++ ||||||||++||||++
T Consensus 101 -----------------~------------------~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~~rv~laral~ 140 (223)
T TIGR03740 101 -----------------P------------------DSRIDEVLNIVDLTNTGKKKAKQ-----FSLGMKQRLGIAIALL 140 (223)
T ss_pred -----------------C------------------HHHHHHHHHHcCCcHHHhhhHhh-----CCHHHHHHHHHHHHHh
Confidence 0 01235578889998777776654 9999999999999999
Q ss_pred cCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhh
Q 000773 161 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRER 232 (1293)
Q Consensus 161 ~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~ 232 (1293)
.+|++++|||||+|||+.++..+.+.|+++++ .++|+|+++|+ .+++.+.+|++++|++|++++.|++.+
T Consensus 141 ~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 141 NHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSHI-LSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred cCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcCC-HHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999999999999865 57898887665 457888999999999999999998643
No 473
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.97 E-value=2.8e-31 Score=293.16 Aligned_cols=182 Identities=25% Similarity=0.325 Sum_probs=149.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccc-------cceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVP-------QKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||.||+.+...
T Consensus 38 ~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~ 114 (228)
T PRK10584 38 TIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPAL 114 (228)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999987754321 2468999999988999999999987643
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhh
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRV 153 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1293)
..... .. +.+..++++++.+||.+..++.+++ ||||||||+
T Consensus 115 ~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Ge~qrl 155 (228)
T PRK10584 115 LRGES--------------------SR--------------QSRNGAKALLEQLGLGKRLDHLPAQ-----LSGGEQQRV 155 (228)
T ss_pred hcCCC--------------------HH--------------HHHHHHHHHHHHcCCHhHhhCChhh-----CCHHHHHHH
Confidence 21100 00 0112346678999998777776654 999999999
Q ss_pred HHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEE
Q 000773 154 TTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVY 226 (1293)
Q Consensus 154 ~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~ 226 (1293)
+||+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|++ +++ +.+|++++|++|++++
T Consensus 156 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~-~~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 156 ALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDL-QLA-ARCDRRLRLVNGQLQE 226 (228)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEEEEECCEEEe
Confidence 9999999999999999999999999999999999998766688999976665 455 5599999999999875
No 474
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.5e-31 Score=300.42 Aligned_cols=190 Identities=27% Similarity=0.357 Sum_probs=155.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++. .++.+||+||+.++.....
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~ 113 (271)
T PRK13632 37 YVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKK 113 (271)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 999999998875422 3457899999974 5677899999988643211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. ... +.+..++++++.+||.+..++.++ .||||||||++||
T Consensus 114 ~--------------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la 154 (271)
T PRK13632 114 V--------------------PPK--------------KMKDIIDDLAKKVGMEDYLDKEPQ-----NLSGGQKQRVAIA 154 (271)
T ss_pred C--------------------CHH--------------HHHHHHHHHHHHcCCHHHhhCCcc-----cCCHHHHHHHHHH
Confidence 0 000 011235668899999887777765 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|||+.+|++++|||||+|||+.++..+++.|+++++++++|+|++.|++. ++ ..+|++++|++|++++.|+.+++.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999987655689999877664 55 479999999999999999987754
No 475
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.9e-31 Score=292.77 Aligned_cols=191 Identities=26% Similarity=0.392 Sum_probs=158.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++....+..
T Consensus 27 ~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~- 102 (235)
T cd03299 27 YFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVD- 102 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcCCC-
Confidence 47999999999999999999999987 899999998875422 2457899999999999999999998764321100
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
..+ ....+.++++.+||.+..++.+.+ ||||||||++||||+
T Consensus 103 -------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~laral 144 (235)
T cd03299 103 -------------------KKE--------------IERKVLEIAEMLGIDHLLNRKPET-----LSGGEQQRVAIARAL 144 (235)
T ss_pred -------------------HHH--------------HHHHHHHHHHHcCChhHHhcCccc-----CCHHHHHHHHHHHHH
Confidence 000 011245578889998877777754 999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||+|||+.++..+++.|++++.+.++|+|++.|++ +++.+.+|++++|++|++++.|+.+++.
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~-~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 218 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDF-EEAWALADKVAIMLNGKLIQVGKPEEVF 218 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999998765588999986654 6788899999999999999999987664
No 476
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.97 E-value=4e-31 Score=295.28 Aligned_cols=192 Identities=22% Similarity=0.368 Sum_probs=153.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeEEEEECCcccCCc-----cccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRD--LKVRGEITYNGYRLNEF-----VPQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|.++|+ ...+|+|.++|.++... ..++.++|++|++.+++ +|++||+.+...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~ 107 (247)
T TIGR00972 29 VTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPR 107 (247)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHH
Confidence 47999999999999999999999763 12379999999887531 12457899999998888 999999988654
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc----cccCcccCCCccccccccc
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD----ICKDTIVGDEMNRGISGGQ 149 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1293)
..+... .. +.+..++.+++.+||. +..++.++ .|||||
T Consensus 108 ~~~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~~~~-----~LSgG~ 149 (247)
T TIGR00972 108 LHGIKD-------------------KK--------------ELDEIVEESLKKAALWDEVKDRLHDSAL-----GLSGGQ 149 (247)
T ss_pred hcCCCC-------------------HH--------------HHHHHHHHHHHHcCCCcchhhHhhCCcc-----cCCHHH
Confidence 321000 00 0012345678889997 55555554 599999
Q ss_pred chhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcC
Q 000773 150 KKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGP 229 (1293)
Q Consensus 150 rqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~ 229 (1293)
|||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++.|+ .+++.+.+|++++|++|++++.|+
T Consensus 150 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivsH~-~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 150 QQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIVTHN-MQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEEecC-HHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999865 3788887554 567888999999999999999999
Q ss_pred hhhHH
Q 000773 230 RERVL 234 (1293)
Q Consensus 230 ~~~~~ 234 (1293)
++++.
T Consensus 227 ~~~~~ 231 (247)
T TIGR00972 227 TEQIF 231 (247)
T ss_pred HHHHH
Confidence 88764
No 477
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=3.7e-31 Score=294.92 Aligned_cols=196 Identities=21% Similarity=0.329 Sum_probs=156.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccccCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDVHVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~ 106 (242)
T TIGR03411 30 LRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDK 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhccc
Confidence 47999999999999999999999987 999999998775432 13458999999999999999999988643110
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
..+..... .... +.+..++..++.+|+++..++.+++ |||||||||+||
T Consensus 107 --~~~~~~~~----------~~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Ge~qrv~la 155 (242)
T TIGR03411 107 --SVFASLFF----------RLSA--------------EEKDRIEEVLETIGLADEADRLAGL-----LSHGQKQWLEIG 155 (242)
T ss_pred --cccccccc----------ccHH--------------HHHHHHHHHHHHcCCchhhcCChhh-----CCHHHHHHHHHH
Confidence 00000000 0000 0122356788999998877776654 999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERV 233 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~ 233 (1293)
||++.+|++++|||||+|||+.++..+++.|+++++ ++|+|++.|+ .+++.+.||++++|++|++++.|+.+++
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~-~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVEHD-MEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEECC-HHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 999999999999999999999999999999999864 5788887554 5678889999999999999999988775
No 478
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.9e-31 Score=328.76 Aligned_cols=196 Identities=20% Similarity=0.306 Sum_probs=158.8
Q ss_pred ccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 000773 717 EDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVT 796 (1293)
Q Consensus 717 ~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lT 796 (1293)
++++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|. +.+||++|++.+++.+|
T Consensus 11 ~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~~--------~~i~~~~q~~~~~~~~t 80 (530)
T PRK15064 11 FGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEP--SAGNVSLDPN--------ERLGKLRQDQFAFEEFT 80 (530)
T ss_pred eCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEecCC--------CEEEEEeccCCcCCCCc
Confidence 3456799999999999999999999999999999999997653 4799999873 34899999999999999
Q ss_pred HHHHHHHHHH-hc-----------CCC-CC----------------CHHHHHHHHHHHHHHcCCcccc-cccccCCCCCC
Q 000773 797 VKESLIYSAF-LR-----------LAK-EV----------------SKEDKIIFVEEVMDLVELESLK-DAIVGLPGVTG 846 (1293)
Q Consensus 797 v~e~l~~~~~-~~-----------~~~-~~----------------~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~ 846 (1293)
|+|++.+... .+ .+. .. ...+...+++++++.+|+.+.. ++.++ .
T Consensus 81 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-----~ 155 (530)
T PRK15064 81 VLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMS-----E 155 (530)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchh-----h
Confidence 9999986421 00 000 00 0011234578899999997543 33433 7
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEE
Q 000773 847 LSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQV 926 (1293)
Q Consensus 847 lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~ 926 (1293)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++ .|.|||++||+++ .+.+.+|++++|.+ |++
T Consensus 156 LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~---~~~tiiivsHd~~-~~~~~~d~i~~l~~-g~i 230 (530)
T PRK15064 156 VAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE---RNSTMIIISHDRH-FLNSVCTHMADLDY-GEL 230 (530)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh---CCCeEEEEeCCHH-HHHhhcceEEEEeC-CEE
Confidence 999999999999999999999999999999999999999999864 5899999999975 56788999999985 788
Q ss_pred -EEeCCC
Q 000773 927 -IYSGPL 932 (1293)
Q Consensus 927 -~~~g~~ 932 (1293)
++.|+.
T Consensus 231 ~~~~g~~ 237 (530)
T PRK15064 231 RVYPGNY 237 (530)
T ss_pred EEecCCH
Confidence 577875
No 479
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.2e-31 Score=305.43 Aligned_cols=196 Identities=21% Similarity=0.236 Sum_probs=156.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC-ceeEEEEECCcccCCccc-------cceEEeecccc--ccCCCCCHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDL-KVRGEITYNGYRLNEFVP-------QKTSAYISQND--VHVGEMTVKETLDF 70 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~-~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTV~e~l~f 70 (1293)
+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++ .+.+.+||.+++..
T Consensus 35 ~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~ 114 (326)
T PRK11022 35 VVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIME 114 (326)
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHH
Confidence 479999999999999999999987421 248999999998754321 13589999997 47888999999876
Q ss_pred HhhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCcc---ccCcccCCCccccccc
Q 000773 71 SARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDI---CKDTIVGDEMNRGISG 147 (1293)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~~t~vg~~~~~~LSG 147 (1293)
........ .. .+.++.++++|+.+||.+ ..++ ++.+|||
T Consensus 115 ~l~~~~~~-------------------~~--------------~~~~~~~~~~L~~~gL~~~~~~l~~-----~p~~LSg 156 (326)
T PRK11022 115 AIKVHQGG-------------------NK--------------KTRRQRAIDLLNQVGIPDPASRLDV-----YPHQLSG 156 (326)
T ss_pred HHHHhcCC-------------------CH--------------HHHHHHHHHHHHHCCCCChHHHHhC-----CchhCCH
Confidence 54321000 00 001233567889999974 2333 4456999
Q ss_pred ccchhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEE
Q 000773 148 GQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQ 227 (1293)
Q Consensus 148 GqrqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~ 227 (1293)
||||||+||+||+.+|+++++||||+|||+.++..+++.|+++.++.|.|+|+++ |+.+.+.+++|||++|++|++++.
T Consensus 157 Gq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iT-Hdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 157 GMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLIT-HDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999876789999864 556678889999999999999999
Q ss_pred cChhhHHH
Q 000773 228 GPRERVLE 235 (1293)
Q Consensus 228 G~~~~~~~ 235 (1293)
|+.+++.+
T Consensus 236 g~~~~~~~ 243 (326)
T PRK11022 236 GKAHDIFR 243 (326)
T ss_pred CCHHHHhh
Confidence 99988753
No 480
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.7e-31 Score=285.40 Aligned_cols=166 Identities=43% Similarity=0.742 Sum_probs=140.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeeccccccCCCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|.++|....+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--- 111 (202)
T cd03233 35 MVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--- 111 (202)
T ss_pred EEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc---
Confidence 4799999999999999999999982112399999999887543 23467899999999999999999998753210
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.++ ....||||||||++||+|
T Consensus 112 ------------------------------------------------------~~~-----~~~~LS~Ge~qrl~lara 132 (202)
T cd03233 112 ------------------------------------------------------GNE-----FVRGISGGERKRVSIAEA 132 (202)
T ss_pred ------------------------------------------------------ccc-----chhhCCHHHHHHHHHHHH
Confidence 112 224599999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
|+.+|++++|||||+|||+.++..+++.|++++++.+.|+++++||+.+++.+.+|++++|++|++++.|
T Consensus 133 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 133 LVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999999999976557787877788888899999999999999998765
No 481
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.9e-31 Score=299.90 Aligned_cols=189 Identities=27% Similarity=0.388 Sum_probs=154.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc----ccceEEeeccccc-cCCCCCHHHHHHHHhhcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV----PQKTSAYISQNDV-HVGEMTVKETLDFSARCL 75 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~ 75 (1293)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+...||.||+.++....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~ 106 (274)
T PRK13644 30 YIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL 106 (274)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc
Confidence 47999999999999999999999987 999999998875421 2456899999975 366789999998764321
Q ss_pred CCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHH
Q 000773 76 GVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTT 155 (1293)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1293)
+. +.. +.++.++++++.+||++..++.+++ ||||||||++|
T Consensus 107 ~~--------------------~~~--------------~~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrv~l 147 (274)
T PRK13644 107 CL--------------------PPI--------------EIRKRVDRALAEIGLEKYRHRSPKT-----LSGGQGQCVAL 147 (274)
T ss_pred CC--------------------CHH--------------HHHHHHHHHHHHCCCHHHhcCCccc-----CCHHHHHHHHH
Confidence 10 000 0112356678999998877777654 99999999999
Q ss_pred HHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 156 GEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 156 a~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|+||+.+|++++|||||+|||+.++..+++.|+++.+ .|+|+|+++|++ +++ ..+|++++|++|++++.|+.+++.
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~~-~~~-~~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHNL-EEL-HDADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecCH-HHH-hhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999999875 588999976654 566 569999999999999999988764
No 482
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.97 E-value=3e-31 Score=298.86 Aligned_cols=201 Identities=24% Similarity=0.347 Sum_probs=158.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--------cccceEEeeccccccCCCCCHHHHHHHHh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--------VPQKTSAYISQNDVHVGEMTVKETLDFSA 72 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--------~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~ 72 (1293)
+++|+||||||||||+++|+|.++|+...+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++.
T Consensus 32 ~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~ 111 (262)
T PRK09984 32 MVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGA 111 (262)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhh
Confidence 4799999999999999999999987523469999999876431 11346899999999899999999998754
Q ss_pred hccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchh
Q 000773 73 RCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKR 152 (1293)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1293)
....+ .. ... ....+. +.+..++++++.+||++..|+.+++ ||||||||
T Consensus 112 ~~~~~--~~------~~~---~~~~~~---------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr 160 (262)
T PRK09984 112 LGSTP--FW------RTC---FSWFTR---------------EQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQR 160 (262)
T ss_pred ccccc--ch------hhh---cccccH---------------HHHHHHHHHHHHcCCHHHHhCCccc-----cCHHHHHH
Confidence 21000 00 000 000000 0122356789999998877777654 99999999
Q ss_pred hHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhh
Q 000773 153 VTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRER 232 (1293)
Q Consensus 153 v~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~ 232 (1293)
|+|||||+.+|++++|||||+|||+.++..+.+.|++++++.|+|+|+++|+ .+++.+.+|++++|++|++++.|++++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~-~~~~~~~~d~i~~l~~g~i~~~g~~~~ 239 (262)
T PRK09984 161 VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQ-VDYALRYCERIVALRQGHVFYDGSSQQ 239 (262)
T ss_pred HHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999976568899997655 457888999999999999999999876
Q ss_pred H
Q 000773 233 V 233 (1293)
Q Consensus 233 ~ 233 (1293)
+
T Consensus 240 ~ 240 (262)
T PRK09984 240 F 240 (262)
T ss_pred h
Confidence 4
No 483
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=99.97 E-value=4.2e-31 Score=292.49 Aligned_cols=185 Identities=23% Similarity=0.296 Sum_probs=151.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc--cccceEEeec-cccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF--VPQKTSAYIS-QNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~-Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++.+||+|++.+.....+.
T Consensus 49 ~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~ 125 (236)
T cd03267 49 IVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDL 125 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999987 99999999865321 2345789997 556778889999999876543211
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
.. .+ ....++.+++.+||++..|+.+++ ||||||||++||+
T Consensus 126 ~~--------------------~~--------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrl~la~ 166 (236)
T cd03267 126 PP--------------------AR--------------FKKRLDELSELLDLEELLDTPVRQ-----LSLGQRMRAEIAA 166 (236)
T ss_pred CH--------------------HH--------------HHHHHHHHHHHcCChhHhcCChhh-----CCHHHHHHHHHHH
Confidence 00 00 011245678889998888887754 9999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.+|++++|++|++++.|
T Consensus 167 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~-~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 167 ALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHY-MKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecC-HHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999977667899987655 45788899999999999998765
No 484
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.1e-31 Score=298.92 Aligned_cols=190 Identities=27% Similarity=0.416 Sum_probs=153.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-----cccceEEeecccccc-CCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-----VPQKTSAYISQNDVH-VGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~-~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.. +...|+.||+.+....
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~ 105 (271)
T PRK13638 29 VTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRN 105 (271)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHH
Confidence 47999999999999999999999987 99999999887421 123568999998752 3456899999876432
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. ..+ ....++.+++.+||.+..++.++ .||||||||++
T Consensus 106 ~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~ 146 (271)
T PRK13638 106 LGVP--------------------EAE--------------ITRRVDEALTLVDAQHFRHQPIQ-----CLSHGQKKRVA 146 (271)
T ss_pred cCCC--------------------HHH--------------HHHHHHHHHHHcCCHhHhcCCch-----hCCHHHHHHHH
Confidence 1100 000 01124567888999877777665 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||++|+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.| ..+++.+.+|++++|++|++++.|+++++.
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tii~vtH-~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QGNHVIISSH-DIDLIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999875 4789888754 556788899999999999999999987764
No 485
>PRK10908 cell division protein FtsE; Provisional
Probab=99.97 E-value=3.6e-31 Score=290.85 Aligned_cols=181 Identities=21% Similarity=0.277 Sum_probs=148.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc------ccceEEeeccccccCCCCCHHHHHHHHhhc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV------PQKTSAYISQNDVHVGEMTVKETLDFSARC 74 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~ 74 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (222)
T PRK10908 30 MAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLII 106 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHh
Confidence 47999999999999999999999987 999999998775421 245689999999888899999999886532
Q ss_pred cCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhH
Q 000773 75 LGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.+.. ..+ .+..++..++.+||.+..++.++ .||||||||++
T Consensus 107 ~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 147 (222)
T PRK10908 107 AGAS--------------------GDD--------------IRRRVSAALDKVGLLDKAKNFPI-----QLSGGEQQRVG 147 (222)
T ss_pred cCCC--------------------HHH--------------HHHHHHHHHHHcCChhhhhCCch-----hCCHHHHHHHH
Confidence 2100 000 01124567888999877776664 49999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEE
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIV 225 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~ 225 (1293)
||||++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.| ..+++...+|++++|++|+++
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH-~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 148 IARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-VGVTVLMATH-DIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-CHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999999999999999865 4788888755 556788899999999999975
No 486
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=99.97 E-value=4.5e-31 Score=327.97 Aligned_cols=193 Identities=29% Similarity=0.404 Sum_probs=157.4
Q ss_pred ccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccCChhcccceEEEEccCCCCCCCCCHH
Q 000773 719 KLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVK 798 (1293)
Q Consensus 719 ~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~ 798 (1293)
++.+|+||||+|++||+++|+|||||||||||++|+|..++ .+|+|.+++. ..+||++|++.+++.+||.
T Consensus 19 ~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p--~~G~i~~~~~--------~~i~~v~Q~~~~~~~~tv~ 88 (556)
T PRK11819 19 KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKE--FEGEARPAPG--------IKVGYLPQEPQLDPEKTVR 88 (556)
T ss_pred CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEecCC--------CEEEEEecCCCCCCCCcHH
Confidence 46799999999999999999999999999999999998663 4799998752 3589999999999999999
Q ss_pred HHHHHHHH-hc------------CCCCCC--------------------HHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000773 799 ESLIYSAF-LR------------LAKEVS--------------------KEDKIIFVEEVMDLVELESLKDAIVGLPGVT 845 (1293)
Q Consensus 799 e~l~~~~~-~~------------~~~~~~--------------------~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 845 (1293)
||+.+... .+ ...... ..+...+++++++.+|+.. .++.++
T Consensus 89 e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~----- 162 (556)
T PRK11819 89 ENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP-WDAKVT----- 162 (556)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc-ccCchh-----
Confidence 99987421 00 000000 0011345778899999953 566554
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcE
Q 000773 846 GLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQ 925 (1293)
Q Consensus 846 ~lSgGerqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~ 925 (1293)
.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++ +.|||++||+++ .+...+|++++|.+ |+
T Consensus 163 ~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~---~~tviiisHd~~-~~~~~~d~i~~l~~-g~ 237 (556)
T PRK11819 163 KLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDY---PGTVVAVTHDRY-FLDNVAGWILELDR-GR 237 (556)
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhC---CCeEEEEeCCHH-HHHhhcCeEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999986 259999999975 56778999999985 77
Q ss_pred EE-EeCCC
Q 000773 926 VI-YSGPL 932 (1293)
Q Consensus 926 ~~-~~g~~ 932 (1293)
++ +.|+.
T Consensus 238 i~~~~g~~ 245 (556)
T PRK11819 238 GIPWEGNY 245 (556)
T ss_pred EEEecCCH
Confidence 65 77765
No 487
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=2.5e-31 Score=289.99 Aligned_cols=179 Identities=28% Similarity=0.435 Sum_probs=145.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+||+||+.++....+
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~ 105 (211)
T cd03225 29 FVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLG 105 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHcC
Confidence 47999999999999999999999987 999999998765322 2456899999974 3667899999987643211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
.. ..+ .+..++++++.+||.+..++.++ .|||||||||+||
T Consensus 106 ~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la 146 (211)
T cd03225 106 LP--------------------EEE--------------IEERVEEALELVGLEGLRDRSPF-----TLSGGQKQRVAIA 146 (211)
T ss_pred CC--------------------HHH--------------HHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHH
Confidence 00 000 01234567889999877776665 4999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCe
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQ 223 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~ 223 (1293)
|||+.+|++++|||||+|||+.++..+.+.|++++++ ++|+|++.|+ ..++..+||++++|++|+
T Consensus 147 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~sH~-~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 147 GVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVTHD-LDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEeCC-HHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999999998764 8899887655 567888899999999885
No 488
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.2e-31 Score=300.82 Aligned_cols=194 Identities=25% Similarity=0.342 Sum_probs=156.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc-cCCCCCHHHHHHHHhhccC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV-HVGEMTVKETLDFSARCLG 76 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~~ 76 (1293)
+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++..||+||+.|.....+
T Consensus 35 ~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~ 114 (282)
T PRK13640 35 WTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRA 114 (282)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCC
Confidence 47999999999999999999999886212399999999875422 2456899999974 5677899999987643211
Q ss_pred CCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHH
Q 000773 77 VGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTG 156 (1293)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1293)
. ... +.++.++.+++.+||++..++.+. .||||||||++||
T Consensus 115 ~--------------------~~~--------------~~~~~~~~~l~~~~L~~~~~~~~~-----~LS~G~~qrv~la 155 (282)
T PRK13640 115 V--------------------PRP--------------EMIKIVRDVLADVGMLDYIDSEPA-----NLSGGQKQRVAIA 155 (282)
T ss_pred C--------------------CHH--------------HHHHHHHHHHHHCCChhHhcCCcc-----cCCHHHHHHHHHH
Confidence 0 000 011235667899999887777664 5999999999999
Q ss_pred HHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 157 EMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 157 ~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
+||+.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.|++ +++ ..||++++|++|++++.|+++++.+
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~-~~~-~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDI-DEA-NMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999765688999987665 455 5799999999999999999887643
No 489
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.4e-31 Score=298.54 Aligned_cols=195 Identities=23% Similarity=0.351 Sum_probs=157.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+|++.++......
T Consensus 35 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~ 111 (265)
T PRK10253 35 FTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQP 111 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccc
Confidence 47999999999999999999999987 899999998765422 234689999999888889999999875211000
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
... .... ..+..++.+++.+||.+..++.+. .||||||||++|||
T Consensus 112 --~~~-------------~~~~---------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~lar 156 (265)
T PRK10253 112 --LFT-------------RWRK---------------EDEEAVTKAMQATGITHLADQSVD-----TLSGGQRQRAWIAM 156 (265)
T ss_pred --ccc-------------CCCH---------------HHHHHHHHHHHHcCCHHHhcCCcc-----cCChHHHHHHHHHH
Confidence 000 0000 001234667889999877777665 49999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
|++.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.| ...++.+.+|++++|++|++++.|+++++.
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH-~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLH-DLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999987655889988755 456788999999999999999999987764
No 490
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=6.6e-31 Score=290.49 Aligned_cols=191 Identities=26% Similarity=0.336 Sum_probs=158.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc-ccceEEeeccccccCCCCCHHHHHHHHhhccCCCc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV-PQKTSAYISQNDVHVGEMTVKETLDFSARCLGVGT 79 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~ 79 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~~~- 103 (232)
T cd03300 28 FFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKKLP- 103 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999987 899999998875432 2457899999999888899999998865432110
Q ss_pred chhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHHH
Q 000773 80 RYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEMI 159 (1293)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1293)
. . ..++.++.+++.+||.+..++.+. .||||||||++||||+
T Consensus 104 -~------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrl~laral 145 (232)
T cd03300 104 -K------------------A--------------EIKERVAEALDLVQLEGYANRKPS-----QLSGGQQQRVAIARAL 145 (232)
T ss_pred -H------------------H--------------HHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHH
Confidence 0 0 001234567889999887777664 4999999999999999
Q ss_pred hcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 160 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 160 ~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|++ .++.+.+|++++|++|++++.|+.+++.
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~-~~~~~~~d~i~~l~~G~~~~~~~~~~~~ 219 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQ-EEALTMSDRIAVMNKGKIQQIGTPEEIY 219 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCEEEEEECCEEEecCCHHHHH
Confidence 9999999999999999999999999999998765588999976654 5778899999999999999999877654
No 491
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.97 E-value=3.9e-31 Score=298.14 Aligned_cols=192 Identities=20% Similarity=0.225 Sum_probs=154.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCcc---ccceEEeeccccc--cCCCCCHHHHHHHHhhcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFV---PQKTSAYISQNDV--HVGEMTVKETLDFSARCL 75 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~--~~~~lTV~e~l~f~~~~~ 75 (1293)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++. +++.+||.|++.+.....
T Consensus 41 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~ 117 (267)
T PRK15112 41 TLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN 117 (267)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhc
Confidence 47999999999999999999999987 999999998775321 1346899999874 567889999998764421
Q ss_pred CCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccchhhH
Q 000773 76 GVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQKKRVT 154 (1293)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1293)
.... .. +....++.+++.+||. +..++.+. .|||||||||+
T Consensus 118 ~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----~LS~G~~qrv~ 159 (267)
T PRK15112 118 TDLE-------------------PE--------------QREKQIIETLRQVGLLPDHASYYPH-----MLAPGQKQRLG 159 (267)
T ss_pred cCCC-------------------HH--------------HHHHHHHHHHHHcCCChHHHhcCch-----hcCHHHHHHHH
Confidence 1000 00 0012346678999994 55565554 59999999999
Q ss_pred HHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 155 TGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 155 ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++..+||++++|++|++++.|+++++.
T Consensus 160 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~-~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 160 LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQH-LGMMKHISDQVLVMHQGEVVERGSTADVL 238 (267)
T ss_pred HHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCC-HHHHHHhcCEEEEEECCEEEecCCHHHHh
Confidence 99999999999999999999999999999999999977568898887555 56788899999999999999999887764
No 492
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.97 E-value=2.3e-31 Score=290.57 Aligned_cols=185 Identities=26% Similarity=0.379 Sum_probs=146.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCccccceEEeeccccccC--CCCCHHHHHHHHhhccCCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEFVPQKTSAYISQNDVHV--GEMTVKETLDFSARCLGVG 78 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~--~~lTV~e~l~f~~~~~~~~ 78 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++. ..++.++|++|++.+. ..+||+||+.++......
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~~- 100 (213)
T cd03235 27 FLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHKG- 100 (213)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCcHHHHHHhccccccc-
Confidence 47999999999999999999999987 999999998764 2345789999997653 347999999875431100
Q ss_pred cchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHHH
Q 000773 79 TRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGEM 158 (1293)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1293)
.+.. ... +.+..++.+++.+||++..++.+++ ||||||||++||+|
T Consensus 101 -~~~~--------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~la~a 146 (213)
T cd03235 101 -LFRR--------------LSK--------------ADKAKVDEALERVGLSELADRQIGE-----LSGGQQQRVLLARA 146 (213)
T ss_pred -cccC--------------CCH--------------HHHHHHHHHHHHcCCHHHHhCCccc-----CCHHHHHHHHHHHH
Confidence 0000 000 0012356678999998777776654 99999999999999
Q ss_pred HhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEc
Q 000773 159 IVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQG 228 (1293)
Q Consensus 159 l~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G 228 (1293)
|+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|+ .+++.+.+|++++|++| +++.|
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sH~-~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EGMTILVVTHD-LGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCC-HHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999876 58898887554 56788899999999886 66654
No 493
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.4e-31 Score=300.55 Aligned_cols=191 Identities=23% Similarity=0.347 Sum_probs=156.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc----cccceEEeeccccc-cCCCCCHHHHHHHHhhcc
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF----VPQKTSAYISQNDV-HVGEMTVKETLDFSARCL 75 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~~-~~~~lTV~e~l~f~~~~~ 75 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+...||.|++.|+....
T Consensus 38 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~ 114 (280)
T PRK13633 38 FLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL 114 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc
Confidence 47999999999999999999999987 99999999887542 22467899999974 233469999998865422
Q ss_pred CCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHH
Q 000773 76 GVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTT 155 (1293)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1293)
+.. .. +.+..++.+++.+||++..++.+++ ||||||||++|
T Consensus 115 ~~~--------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~-----LS~G~~qrv~l 155 (280)
T PRK13633 115 GIP--------------------PE--------------EIRERVDESLKKVGMYEYRRHAPHL-----LSGGQKQRVAI 155 (280)
T ss_pred CCC--------------------HH--------------HHHHHHHHHHHHCCCHhHhhCCccc-----CCHHHHHHHHH
Confidence 110 00 0112356789999999888887754 99999999999
Q ss_pred HHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHHH
Q 000773 156 GEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVLE 235 (1293)
Q Consensus 156 a~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~~ 235 (1293)
|++|+.+|++++|||||+|||+.++..+.+.|++++++.|+|+|++.|++ +++.. +|++++|++|++++.|+++++..
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~-~~~~~-~d~v~~l~~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYM-EEAVE-ADRIIVMDSGKVVMEGTPKEIFK 233 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCh-HHHhc-CCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999999765689999986665 45654 99999999999999999888753
No 494
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=99.97 E-value=6.3e-31 Score=327.02 Aligned_cols=206 Identities=21% Similarity=0.272 Sum_probs=164.3
Q ss_pred eEEEeeeEEEEECCcccccccccccccccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEEEcCccC
Q 000773 694 AMSFDSVYYYVDMPPEMKEQGVAEDKLRLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 773 (1293)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~~~g~~~ 773 (1293)
.++++|+++..+ +++.+|+|+|+++++||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 322 ~i~~~~v~f~y~------------~~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~--~~G~i~~~g~~~ 387 (547)
T PRK10522 322 TLELRNVTFAYQ------------DNGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQP--QSGEILLDGKPV 387 (547)
T ss_pred eEEEEEEEEEeC------------CCCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEC
Confidence 588999988763 123589999999999999999999999999999999998763 589999999986
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000773 774 KQ---ETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIE 850 (1293)
Q Consensus 774 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 850 (1293)
.+ ..+++.++|++|++.+++. |++|| . ...+ .+.+++.++.+++.+..+...+.....+||||
T Consensus 388 ~~~~~~~~~~~i~~v~q~~~lf~~-ti~~n---~------~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgG 453 (547)
T PRK10522 388 TAEQPEDYRKLFSAVFTDFHLFDQ-LLGPE---G------KPAN----PALVEKWLERLKMAHKLELEDGRISNLKLSKG 453 (547)
T ss_pred CCCCHHHHhhheEEEecChhHHHH-hhccc---c------CchH----HHHHHHHHHHcCCchhhhccccCCCCCCCCHH
Confidence 53 3466789999999887754 67665 0 1111 22357788888887643321111113479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEe
Q 000773 851 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYS 929 (1293)
Q Consensus 851 erqrv~ia~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~ 929 (1293)
||||++|||||+++|++|+||||||+||+.++..+.+.+.+..+ .|+|+|+++|++ +....+|++++|++ |+++..
T Consensus 454 q~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~--~~~~~~d~i~~l~~-G~i~e~ 530 (547)
T PRK10522 454 QKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDD--HYFIHADRLLEMRN-GQLSEL 530 (547)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEech--HHHHhCCEEEEEEC-CEEEEe
Confidence 99999999999999999999999999999999999999876643 589999999996 46778999999986 777765
Q ss_pred C
Q 000773 930 G 930 (1293)
Q Consensus 930 g 930 (1293)
.
T Consensus 531 ~ 531 (547)
T PRK10522 531 T 531 (547)
T ss_pred c
Confidence 3
No 495
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.6e-31 Score=294.91 Aligned_cols=189 Identities=23% Similarity=0.303 Sum_probs=153.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCC---------ccccceEEeeccccccCCCCCHHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNE---------FVPQKTSAYISQNDVHVGEMTVKETLDFS 71 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~---------~~~~~~~~yv~Q~~~~~~~lTV~e~l~f~ 71 (1293)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. ...++.++|++|++.+++.+||.||+.+.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~ 106 (242)
T PRK11124 30 TLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEA 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHH
Confidence 47999999999999999999999887 9999999987521 11245689999999999999999999753
Q ss_pred h-hccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccc
Q 000773 72 A-RCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 72 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1293)
. ...+.. ..+ ....++..++.+||++..++.++ .||||||
T Consensus 107 ~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 147 (242)
T PRK11124 107 PCRVLGLS--------------------KDQ--------------ALARAEKLLERLRLKPYADRFPL-----HLSGGQQ 147 (242)
T ss_pred HHHHcCCC--------------------HHH--------------HHHHHHHHHHHcCChhhhhCChh-----hCCHHHH
Confidence 2 111100 000 01234667889999877777665 4999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.|+ ..++.+.+|++++|++|++++.|++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sh~-~~~~~~~~d~i~~l~~g~i~~~~~~ 225 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TGITQVIVTHE-VEVARKTASRVVYMENGHIVEQGDA 225 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999865 58898887655 4577788999999999999999987
Q ss_pred hhH
Q 000773 231 ERV 233 (1293)
Q Consensus 231 ~~~ 233 (1293)
+++
T Consensus 226 ~~~ 228 (242)
T PRK11124 226 SCF 228 (242)
T ss_pred HHh
Confidence 764
No 496
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.97 E-value=3.5e-31 Score=294.19 Aligned_cols=191 Identities=24% Similarity=0.252 Sum_probs=154.8
Q ss_pred ccccceeeeeecCcEEEEECCCCccHHHHHHHHhCCCCCCceeEEEE-----------EcCccCChh--c-c--cceEEE
Q 000773 721 RLLNEVTSAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGDIR-----------ISGFPKKQE--T-F--ARISGY 784 (1293)
Q Consensus 721 ~iL~~vs~~i~~Ge~~~i~G~nGaGKTTLl~~l~g~~~~~~~~G~i~-----------~~g~~~~~~--~-~--~~~~~~ 784 (1293)
.+|+|+| .+++||+++|+|||||||||||++|+|..++ .+|+|. ++|.+.... . . ...++|
T Consensus 15 ~~l~~i~-~i~~Ge~~~IvG~nGsGKSTLlk~l~Gl~~p--~~G~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 91 (255)
T cd03236 15 FKLHRLP-VPREGQVLGLVGPNGIGKSTALKILAGKLKP--NLGKFDDPPDWDEILDEFRGSELQNYFTKLLEGDVKVIV 91 (255)
T ss_pred hhhhcCC-CCCCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEeeccccchhhhhccCchhhhhhHHhhhcccceee
Confidence 5999999 5999999999999999999999999998763 479985 777765321 1 1 123789
Q ss_pred EccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000773 785 CEQNDIHSPQVTVKESLIYSAFLRLAKEVSKEDKIIFVEEVMDLVELESLKDAIVGLPGVTGLSIEQRKRLTIAVELVAN 864 (1293)
Q Consensus 785 v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~aL~~~ 864 (1293)
++|+...++. ++.+++.+.. + ..+....+.++++.+|+.+..++.+. .||||||||++||++|+.+
T Consensus 92 ~~~~~~~~~~-~~~~~i~~~l--~------~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~laral~~~ 157 (255)
T cd03236 92 KPQYVDLIPK-AVKGKVGELL--K------KKDERGKLDELVDQLELRHVLDRNID-----QLSGGELQRVAIAAALARD 157 (255)
T ss_pred ecchhccCch-HHHHHHHHHh--c------hhHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHHhC
Confidence 9999888774 8888876532 1 12223457899999999877766544 7999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHhHhheeecCcEEEEeCC
Q 000773 865 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGP 931 (1293)
Q Consensus 865 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~~G~~~~~g~ 931 (1293)
|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|++++|. |++.+.|-
T Consensus 158 p~illlDEPts~LD~~~~~~l~~~l~~l~~~~~tIIiiSHd~~-~~~~~ad~i~~l~--~~~~~~~~ 221 (255)
T cd03236 158 ADFYFFDEPSSYLDIKQRLNAARLIRELAEDDNYVLVVEHDLA-VLDYLSDYIHCLY--GEPGAYGV 221 (255)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEC--CCCCccee
Confidence 9999999999999999999999999999877999999999975 4556799999994 55665553
No 497
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.8e-31 Score=298.13 Aligned_cols=195 Identities=22% Similarity=0.344 Sum_probs=156.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc---cccceEEeeccccccCCCCCHHHHHHHHhhccCC
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF---VPQKTSAYISQNDVHVGEMTVKETLDFSARCLGV 77 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~~~~~ 77 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||.||+.++.....
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~- 114 (265)
T PRK10575 39 VTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWH- 114 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCccccc-
Confidence 47999999999999999999999887 89999999876432 123568999999888888999999987532100
Q ss_pred CcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCccccCcccCCCcccccccccchhhHHHH
Q 000773 78 GTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDEMNRGISGGQKKRVTTGE 157 (1293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1293)
... ...+. ..+..++.+++.+||++..++.+++ |||||||||+|||
T Consensus 115 -~~~-------------~~~~~---------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~lar 160 (265)
T PRK10575 115 -GAL-------------GRFGA---------------ADREKVEEAISLVGLKPLAHRLVDS-----LSGGERQRAWIAM 160 (265)
T ss_pred -ccc-------------cCCCH---------------HHHHHHHHHHHHcCCHHHhcCCccc-----CCHHHHHHHHHHH
Confidence 000 00000 0012346678899998777777764 9999999999999
Q ss_pred HHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcChhhHH
Q 000773 158 MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPRERVL 234 (1293)
Q Consensus 158 al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~~~~~ 234 (1293)
||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.+|++++|++|++++.|+.+++.
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~-~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHD-INMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999876558898887555 56788999999999999999999887653
No 498
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4e-31 Score=301.72 Aligned_cols=191 Identities=21% Similarity=0.320 Sum_probs=152.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCC--------ccccceEEeeccccc-cCCCCCHHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNE--------FVPQKTSAYISQNDV-HVGEMTVKETLDFS 71 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~--------~~~~~~~~yv~Q~~~-~~~~lTV~e~l~f~ 71 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. ...++.++|++|++. .+...||+||+.++
T Consensus 39 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~ 115 (289)
T PRK13645 39 VTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFG 115 (289)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHH
Confidence 47999999999999999999999987 8999999987642 112456899999973 22345999999886
Q ss_pred hhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccc
Q 000773 72 ARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1293)
....+.. ..+ ....++.+++.++|. +..++.++ .||||||
T Consensus 116 ~~~~~~~--------------------~~~--------------~~~~~~~ll~~~~L~~~~~~~~~~-----~LS~Gq~ 156 (289)
T PRK13645 116 PVNLGEN--------------------KQE--------------AYKKVPELLKLVQLPEDYVKRSPF-----ELSGGQK 156 (289)
T ss_pred HHHcCCC--------------------HHH--------------HHHHHHHHHHHcCCChhHhcCChh-----hCCHHHH
Confidence 4321100 000 011245678888994 56666554 4999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
||++|||||+.+|++++|||||+|||+.++..+++.|+++.++.++|+|++.|+ .+++.+.||++++|++|++++.|+.
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~-~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHN-MDQVLRIADEVIVMHEGKVISIGSP 235 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999876568899987554 5678899999999999999999998
Q ss_pred hhHH
Q 000773 231 ERVL 234 (1293)
Q Consensus 231 ~~~~ 234 (1293)
+++.
T Consensus 236 ~~~~ 239 (289)
T PRK13645 236 FEIF 239 (289)
T ss_pred HHHh
Confidence 7764
No 499
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.8e-31 Score=300.02 Aligned_cols=189 Identities=21% Similarity=0.330 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeEEEEECCcccCCc-------cccceEEeecccc--ccCCCCCHHHHHHHH
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDLKVRGEITYNGYRLNEF-------VPQKTSAYISQND--VHVGEMTVKETLDFS 71 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~lTV~e~l~f~ 71 (1293)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++ .+++ .||+||+.+.
T Consensus 35 ~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~ 110 (280)
T PRK13649 35 YTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFG 110 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHH
Confidence 47999999999999999999999987 99999999876532 1235689999986 3444 6999999876
Q ss_pred hhccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc-cccCcccCCCcccccccccc
Q 000773 72 ARCLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD-ICKDTIVGDEMNRGISGGQK 150 (1293)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1293)
....+.. ..+ .+..++.+++.+||. ...++.++ .||||||
T Consensus 111 ~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~ 151 (280)
T PRK13649 111 PQNFGVS--------------------QEE--------------AEALAREKLALVGISESLFEKNPF-----ELSGGQM 151 (280)
T ss_pred HHHcCCC--------------------HHH--------------HHHHHHHHHHHcCCChhhhhCCcc-----cCCHHHH
Confidence 4321100 000 012345678889997 35566654 4999999
Q ss_pred hhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcCh
Q 000773 151 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 230 (1293)
Q Consensus 151 qRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~~ 230 (1293)
||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .++|||+++|+ .+++.+.+|++++|++|++++.|++
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivsH~-~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SGMTIVLVTHL-MDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecc-HHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999875 48899987655 4678889999999999999999998
Q ss_pred hhHH
Q 000773 231 ERVL 234 (1293)
Q Consensus 231 ~~~~ 234 (1293)
+++.
T Consensus 230 ~~~~ 233 (280)
T PRK13649 230 KDIF 233 (280)
T ss_pred HHHh
Confidence 8764
No 500
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.1e-31 Score=295.49 Aligned_cols=191 Identities=19% Similarity=0.294 Sum_probs=150.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC--ceeEEEEECCcccCCc-----cccceEEeeccccccCCCCCHHHHHHHHhh
Q 000773 1 MTLLLGPPSSGKTTLLLALAGKLNRDL--KVRGEITYNGYRLNEF-----VPQKTSAYISQNDVHVGEMTVKETLDFSAR 73 (1293)
Q Consensus 1 ~~~ilG~nGsGKSTLL~~l~G~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTV~e~l~f~~~ 73 (1293)
+++|+||||||||||+++|+|..+|.. ..+|+|.++|.++... ..++.++|++|++.+++ +||+||+.++..
T Consensus 40 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 118 (258)
T PRK14268 40 VTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPR 118 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHH
Confidence 479999999999999999999987410 1389999999876431 12456899999988887 899999988653
Q ss_pred ccCCCcchhhhhHhhHHhhhcCCCChhHHHHHHHHhhhccccchhhHHHHHHHhCCc----cccCcccCCCccccccccc
Q 000773 74 CLGVGTRYELLSELARREKDAGIFPEAEIDLFMKATAMEGVESSLITDYTLKILGLD----ICKDTIVGDEMNRGISGGQ 149 (1293)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1293)
..+.. ..+ .+..++++++.+|+. +..++.+ ..|||||
T Consensus 119 ~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~LSgG~ 159 (258)
T PRK14268 119 IHGAN--------------------KKD--------------LDGVVENALRSAALWDETSDRLKSPA-----LSLSGGQ 159 (258)
T ss_pred HcCCC--------------------HHH--------------HHHHHHHHHHHcCCCcchhhhhcCCh-----hhCCHHH
Confidence 22110 000 011245577888873 3345544 4599999
Q ss_pred chhhHHHHHHhcCCcEeEeeCCCccccHHHHHHHHHHHHHHHhhCCCEEEEEecCCChhHHHhccceEEecCCeEEEEcC
Q 000773 150 KKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHVTDATILMSLLQPAPETFDLFDDIILLSEGQIVYQGP 229 (1293)
Q Consensus 150 rqRv~ia~al~~~p~vlllDEPtsgLD~~~~~~i~~~l~~l~~~~~~tii~~~~~~~~~~~~~~D~i~~L~~G~i~~~G~ 229 (1293)
||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++.|+ .+++.+.||++++|++|++++.|+
T Consensus 160 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~~tiiivsH~-~~~~~~~~d~i~~l~~G~i~~~~~ 236 (258)
T PRK14268 160 QQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--DYTIVIVTHN-MQQAARISDYTGFFLMGELIEFGQ 236 (258)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--CCEEEEEECC-HHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999853 6888887554 567888999999999999999999
Q ss_pred hhhHH
Q 000773 230 RERVL 234 (1293)
Q Consensus 230 ~~~~~ 234 (1293)
++++.
T Consensus 237 ~~~~~ 241 (258)
T PRK14268 237 TRQIF 241 (258)
T ss_pred HHHHh
Confidence 88763
Done!