Query 000774
Match_columns 1293
No_of_seqs 671 out of 4130
Neff 7.9
Searched_HMMs 46136
Date Mon Apr 1 23:25:45 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000774.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000774hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 3E-188 7E-193 1778.9 128.1 1130 5-1143 236-1373(1381)
2 PLN03130 ABC transporter C fam 100.0 3E-184 7E-189 1846.5 152.2 1287 6-1293 336-1622(1622)
3 PLN03232 ABC transporter C fam 100.0 2E-163 5E-168 1646.6 146.1 1147 5-1155 335-1481(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 1E-154 3E-159 1563.7 145.6 1132 5-1145 352-1520(1522)
5 PTZ00243 ABC transporter; Prov 100.0 9E-151 2E-155 1520.7 142.8 1132 9-1149 283-1550(1560)
6 TIGR01271 CFTR_protein cystic 100.0 5E-149 1E-153 1504.6 141.8 1128 8-1148 119-1455(1490)
7 KOG0055 Multidrug/pheromone ex 100.0 7E-147 1E-151 1366.1 112.9 1094 37-1145 97-1225(1228)
8 PTZ00265 multidrug resistance 100.0 1E-133 3E-138 1342.3 135.6 1121 17-1144 103-1464(1466)
9 KOG0058 Peptide exporter, ABC 100.0 6.4E-83 1.4E-87 754.9 61.3 552 585-1145 146-704 (716)
10 COG2274 SunT ABC-type bacterio 100.0 8.7E-77 1.9E-81 735.2 68.0 550 585-1144 153-707 (709)
11 KOG0058 Peptide exporter, ABC 100.0 3.2E-77 6.9E-82 706.5 57.5 497 14-511 191-705 (716)
12 COG2274 SunT ABC-type bacterio 100.0 2.9E-73 6.3E-78 703.8 63.4 496 11-509 194-707 (709)
13 PRK11174 cysteine/glutathione 100.0 1.1E-71 2.5E-76 701.3 70.7 565 573-1145 11-584 (588)
14 COG1132 MdlB ABC-type multidru 100.0 6.1E-71 1.3E-75 690.8 68.7 547 587-1145 15-564 (567)
15 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.8E-70 6.2E-75 699.0 71.5 544 586-1143 136-683 (686)
16 TIGR00958 3a01208 Conjugate Tr 100.0 5.4E-70 1.2E-74 695.5 68.6 543 586-1141 161-710 (711)
17 PRK11174 cysteine/glutathione 100.0 4.8E-70 1E-74 686.6 65.7 492 14-510 66-584 (588)
18 TIGR01193 bacteriocin_ABC ABC- 100.0 1E-69 2.2E-74 696.3 69.5 557 572-1143 144-707 (708)
19 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-69 2.5E-74 696.7 69.4 560 572-1142 142-709 (710)
20 COG1123 ATPase components of v 100.0 2E-71 4.4E-76 651.1 47.2 465 284-1143 5-530 (539)
21 PRK10790 putative multidrug tr 100.0 3.9E-69 8.5E-74 678.3 71.4 545 587-1144 24-574 (592)
22 KOG0055 Multidrug/pheromone ex 100.0 2.9E-71 6.2E-76 690.2 49.9 511 625-1145 72-588 (1228)
23 COG4987 CydC ABC-type transpor 100.0 1.6E-69 3.5E-74 618.9 59.4 501 632-1143 66-571 (573)
24 COG4988 CydD ABC-type transpor 100.0 3.4E-69 7.4E-74 628.4 62.8 497 11-511 40-556 (559)
25 PRK11160 cysteine/glutathione 100.0 5.4E-69 1.2E-73 671.8 69.2 545 588-1143 18-572 (574)
26 TIGR03375 type_I_sec_LssB type 100.0 6.5E-69 1.4E-73 687.3 69.8 536 587-1133 148-689 (694)
27 PRK11176 lipid transporter ATP 100.0 1.2E-68 2.5E-73 673.7 70.5 543 591-1144 30-578 (582)
28 PRK10261 glutathione transport 100.0 7.7E-71 1.7E-75 691.8 49.0 485 283-1139 11-560 (623)
29 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.1E-69 1.5E-73 686.2 67.5 492 13-509 178-684 (686)
30 COG4988 CydD ABC-type transpor 100.0 1.3E-68 2.8E-73 623.6 62.9 506 626-1144 42-554 (559)
31 TIGR01257 rim_protein retinal- 100.0 1.4E-68 3.1E-73 710.5 70.2 307 907-1247 1936-2254(2272)
32 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.3E-68 7.2E-73 683.1 65.7 490 13-507 196-709 (710)
33 PRK13549 xylose transporter AT 100.0 2.6E-70 5.7E-75 674.8 44.2 449 284-1131 5-493 (506)
34 TIGR01846 type_I_sec_HlyB type 100.0 2.1E-67 4.6E-72 672.8 71.5 560 572-1144 127-691 (694)
35 PRK15134 microcin C ABC transp 100.0 5E-70 1.1E-74 675.9 45.0 454 284-1134 5-517 (529)
36 TIGR02203 MsbA_lipidA lipid A 100.0 3.2E-67 7E-72 659.9 70.8 547 586-1143 14-566 (571)
37 TIGR00958 3a01208 Conjugate Tr 100.0 6.9E-68 1.5E-72 676.2 65.3 483 21-506 211-710 (711)
38 PRK09700 D-allose transporter 100.0 1.3E-69 2.7E-74 669.9 46.0 447 284-1129 5-495 (510)
39 TIGR03269 met_CoM_red_A2 methy 100.0 7E-70 1.5E-74 673.8 43.7 438 285-1132 1-517 (520)
40 TIGR01193 bacteriocin_ABC ABC- 100.0 1.4E-67 3E-72 676.6 66.2 489 15-508 200-707 (708)
41 PRK11176 lipid transporter ATP 100.0 4.3E-67 9.2E-72 659.5 66.9 488 20-509 74-578 (582)
42 KOG0057 Mitochondrial Fe/S clu 100.0 2.2E-67 4.9E-72 601.4 57.4 542 589-1144 33-585 (591)
43 PRK13657 cyclic beta-1,2-gluca 100.0 2.4E-66 5.2E-71 652.1 72.6 547 587-1144 20-569 (588)
44 PRK10762 D-ribose transporter 100.0 2.6E-69 5.6E-74 665.2 44.1 441 284-1130 4-482 (501)
45 PRK15439 autoinducer 2 ABC tra 100.0 4.5E-69 9.8E-74 663.3 46.1 450 283-1131 10-491 (510)
46 KOG0056 Heavy metal exporter H 100.0 2.3E-69 5E-74 600.3 39.0 546 589-1144 218-773 (790)
47 COG1132 MdlB ABC-type multidru 100.0 7.4E-67 1.6E-71 653.9 65.2 488 21-511 62-565 (567)
48 PRK15064 ABC transporter ATP-b 100.0 2E-68 4.4E-73 661.7 50.5 201 908-1133 319-526 (530)
49 PRK11160 cysteine/glutathione 100.0 9.9E-67 2.1E-71 651.5 65.9 486 19-508 68-572 (574)
50 TIGR03375 type_I_sec_LssB type 100.0 6.2E-67 1.3E-71 669.1 65.6 480 16-499 192-689 (694)
51 PRK11288 araG L-arabinose tran 100.0 6.8E-69 1.5E-73 661.5 43.3 445 283-1131 3-484 (501)
52 TIGR02633 xylG D-xylose ABC tr 100.0 8.1E-69 1.7E-73 661.7 44.0 448 285-1130 2-490 (500)
53 COG4987 CydC ABC-type transpor 100.0 8.1E-67 1.7E-71 596.8 56.7 483 23-508 70-571 (573)
54 TIGR01192 chvA glucan exporter 100.0 1.4E-65 2.9E-70 642.0 71.8 548 586-1145 19-570 (585)
55 PRK10790 putative multidrug tr 100.0 4.8E-66 1E-70 650.3 68.0 487 20-511 74-576 (592)
56 PRK10636 putative ABC transpor 100.0 2.4E-67 5.1E-72 660.4 55.0 199 908-1132 312-517 (638)
57 TIGR02868 CydC thiol reductant 100.0 3.2E-66 6.9E-71 643.9 64.5 508 588-1104 15-529 (529)
58 TIGR02204 MsbA_rel ABC transpo 100.0 2.2E-65 4.8E-70 643.5 70.5 549 587-1143 19-573 (576)
59 COG0488 Uup ATPase components 100.0 5.3E-68 1.2E-72 637.4 44.5 487 284-1133 3-526 (530)
60 PRK10789 putative multidrug tr 100.0 1.2E-65 2.6E-70 641.7 66.3 506 628-1144 40-549 (569)
61 TIGR02203 MsbA_lipidA lipid A 100.0 1.3E-65 2.9E-70 645.2 66.8 491 17-509 60-567 (571)
62 PRK10789 putative multidrug tr 100.0 2.1E-65 4.6E-70 639.5 67.7 495 14-510 39-550 (569)
63 PRK10982 galactose/methyl gala 100.0 1.1E-67 2.3E-72 649.8 43.5 436 287-1130 1-478 (491)
64 PRK11819 putative ABC transpor 100.0 1.7E-66 3.6E-71 646.4 54.0 199 908-1132 324-533 (556)
65 PRK10938 putative molybdenum t 100.0 1.7E-67 3.8E-72 648.2 44.2 441 284-1124 3-484 (490)
66 TIGR02857 CydD thiol reductant 100.0 4.8E-65 1E-69 633.3 65.2 518 588-1116 5-529 (529)
67 TIGR01846 type_I_sec_HlyB type 100.0 4.9E-65 1.1E-69 651.0 66.4 493 14-509 182-691 (694)
68 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.2E-66 9.1E-71 642.9 52.9 481 284-1132 4-531 (552)
69 PTZ00265 multidrug resistance 100.0 6.1E-65 1.3E-69 681.6 66.5 494 13-509 868-1464(1466)
70 PRK13657 cyclic beta-1,2-gluca 100.0 1.8E-64 3.9E-69 635.1 66.8 481 27-510 72-570 (588)
71 PRK11147 ABC transporter ATPas 100.0 4.9E-66 1.1E-70 650.5 52.6 203 908-1132 319-528 (635)
72 TIGR02204 MsbA_rel ABC transpo 100.0 4.6E-64 9.9E-69 631.6 67.1 489 20-509 67-574 (576)
73 TIGR01192 chvA glucan exporter 100.0 1.3E-63 2.7E-68 624.2 67.3 485 23-510 68-570 (585)
74 TIGR02868 CydC thiol reductant 100.0 4.3E-64 9.3E-69 624.8 61.5 447 20-470 62-529 (529)
75 TIGR01842 type_I_sec_PrtD type 100.0 3.2E-63 7E-68 617.6 67.7 527 588-1132 8-542 (544)
76 TIGR01842 type_I_sec_PrtD type 100.0 3.9E-63 8.5E-68 616.9 64.8 478 13-498 48-542 (544)
77 COG4172 ABC-type uncharacteriz 100.0 4.6E-65 1E-69 558.8 40.7 457 283-1140 5-524 (534)
78 TIGR02857 CydD thiol reductant 100.0 6.4E-63 1.4E-67 614.2 63.1 468 13-482 46-529 (529)
79 KOG0057 Mitochondrial Fe/S clu 100.0 5.1E-63 1.1E-67 565.6 56.5 488 19-510 82-586 (591)
80 TIGR00957 MRP_assoc_pro multi 100.0 9.6E-63 2.1E-67 668.3 66.3 475 32-509 1026-1519(1522)
81 TIGR00956 3a01205 Pleiotropic 100.0 2.6E-63 5.6E-68 665.9 56.3 211 908-1129 759-990 (1394)
82 PLN03073 ABC transporter F fam 100.0 8.9E-63 1.9E-67 619.2 53.7 200 907-1131 507-713 (718)
83 TIGR01194 cyc_pep_trnsptr cycl 100.0 4.7E-61 1E-65 598.1 65.5 522 586-1124 18-551 (555)
84 PLN03130 ABC transporter C fam 100.0 1.5E-61 3.3E-66 654.8 66.1 486 24-512 966-1476(1622)
85 PLN03232 ABC transporter C fam 100.0 3.2E-61 7E-66 652.5 64.6 479 31-512 970-1473(1495)
86 COG5265 ATM1 ABC-type transpor 100.0 9.9E-63 2.1E-67 545.3 40.1 488 646-1143 4-496 (497)
87 KOG0056 Heavy metal exporter H 100.0 5E-64 1.1E-68 557.8 29.5 471 35-511 283-775 (790)
88 PTZ00243 ABC transporter; Prov 100.0 1E-60 2.2E-65 646.2 66.0 472 38-511 1025-1547(1560)
89 COG4618 ArpD ABC-type protease 100.0 3.7E-60 8.1E-65 536.3 48.7 478 13-499 65-561 (580)
90 PRK13409 putative ATPase RIL; 100.0 3.5E-61 7.5E-66 595.4 40.9 191 908-1126 340-536 (590)
91 TIGR01271 CFTR_protein cystic 100.0 1.8E-58 3.8E-63 624.7 66.6 475 34-512 948-1454(1490)
92 PLN03140 ABC transporter G fam 100.0 3E-59 6.4E-64 623.2 57.9 211 908-1128 867-1106(1470)
93 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.9E-58 4.1E-63 574.7 58.9 458 23-490 65-551 (555)
94 COG1129 MglA ABC-type sugar tr 100.0 4.3E-60 9.4E-65 552.5 40.4 443 283-1129 7-487 (500)
95 PRK10522 multidrug transporter 100.0 2.3E-57 5E-62 565.0 65.2 469 637-1128 61-535 (547)
96 COG4618 ArpD ABC-type protease 100.0 3.9E-57 8.4E-62 511.8 49.6 523 594-1133 31-561 (580)
97 COG5265 ATM1 ABC-type transpor 100.0 5.3E-58 1.2E-62 507.8 38.5 468 38-508 9-496 (497)
98 PRK10522 multidrug transporter 100.0 3.6E-55 7.8E-60 545.3 59.6 452 28-495 65-536 (547)
99 COG3845 ABC-type uncharacteriz 100.0 3.4E-57 7.4E-62 515.1 37.7 448 283-1129 3-489 (501)
100 KOG0054 Multidrug resistance-a 100.0 4.2E-55 9.2E-60 559.4 54.4 472 35-508 882-1373(1381)
101 TIGR00954 3a01203 Peroxysomal 100.0 2E-53 4.4E-58 536.3 56.1 510 587-1117 97-652 (659)
102 TIGR00954 3a01203 Peroxysomal 100.0 6.6E-53 1.4E-57 531.6 58.2 457 20-484 148-653 (659)
103 KOG0927 Predicted transporter 100.0 7E-53 1.5E-57 479.9 28.2 200 908-1131 389-595 (614)
104 KOG0062 ATPase component of AB 100.0 5E-50 1.1E-54 454.2 26.6 200 907-1129 361-566 (582)
105 cd03289 ABCC_CFTR2 The CFTR su 100.0 8.8E-49 1.9E-53 441.8 28.2 239 907-1147 1-239 (275)
106 COG1126 GlnQ ABC-type polar am 100.0 5.2E-49 1.1E-53 404.1 22.0 219 908-1135 2-228 (240)
107 COG1125 OpuBA ABC-type proline 100.0 4.6E-47 9.9E-52 396.3 20.7 222 909-1139 2-232 (309)
108 COG1135 AbcC ABC-type metal io 100.0 3.8E-47 8.3E-52 409.6 20.7 216 909-1135 2-234 (339)
109 COG1126 GlnQ ABC-type polar am 100.0 2.9E-46 6.2E-51 383.9 18.7 203 284-500 2-227 (240)
110 PRK14257 phosphate ABC transpo 100.0 5.7E-45 1.2E-49 421.4 27.2 226 902-1134 74-315 (329)
111 COG1117 PstB ABC-type phosphat 100.0 2.8E-45 6E-50 374.2 18.9 218 908-1134 7-239 (253)
112 cd03288 ABCC_SUR2 The SUR doma 100.0 1E-43 2.2E-48 400.3 28.8 238 905-1142 16-253 (257)
113 COG1120 FepC ABC-type cobalami 100.0 2.1E-44 4.5E-49 391.4 22.1 211 909-1132 3-228 (258)
114 COG1127 Ttg2A ABC-type transpo 100.0 3.8E-44 8.2E-49 374.0 22.7 215 908-1135 8-238 (263)
115 cd03252 ABCC_Hemolysin The ABC 100.0 9.2E-44 2E-48 396.5 27.5 232 909-1141 1-233 (237)
116 cd03244 ABCC_MRP_domain2 Domai 100.0 2.2E-43 4.7E-48 389.3 26.4 219 908-1126 2-220 (221)
117 KOG0066 eIF2-interacting prote 100.0 7.7E-43 1.7E-47 383.6 28.9 199 908-1131 586-790 (807)
118 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.1E-43 4.6E-48 381.2 21.6 208 908-1132 4-227 (254)
119 KOG0065 Pleiotropic drug resis 100.0 3E-42 6.6E-47 429.4 34.9 199 921-1129 802-1018(1391)
120 COG3839 MalK ABC-type sugar tr 100.0 1.9E-43 4E-48 398.4 21.9 217 908-1139 3-230 (338)
121 cd03251 ABCC_MsbA MsbA is an e 100.0 9.7E-43 2.1E-47 387.6 26.6 225 909-1133 1-226 (234)
122 cd03254 ABCC_Glucan_exporter_l 100.0 1E-42 2.2E-47 386.2 26.5 225 908-1133 2-227 (229)
123 COG1124 DppF ABC-type dipeptid 100.0 5.1E-43 1.1E-47 368.1 20.5 223 908-1140 3-239 (252)
124 TIGR02314 ABC_MetN D-methionin 100.0 1.3E-42 2.8E-47 402.1 24.7 219 909-1138 2-236 (343)
125 COG2884 FtsE Predicted ATPase 100.0 3.5E-43 7.5E-48 352.6 16.8 206 909-1126 2-220 (223)
126 COG1135 AbcC ABC-type metal io 100.0 5.2E-43 1.1E-47 377.7 18.9 206 284-500 1-233 (339)
127 COG3842 PotA ABC-type spermidi 100.0 5.1E-43 1.1E-47 396.9 19.8 217 908-1139 5-233 (352)
128 COG1122 CbiO ABC-type cobalt t 100.0 9.2E-43 2E-47 379.7 20.7 214 908-1133 3-229 (235)
129 cd03253 ABCC_ATM1_transporter 100.0 5.7E-42 1.2E-46 381.9 27.3 224 909-1133 1-225 (236)
130 PRK14257 phosphate ABC transpo 100.0 1.6E-42 3.5E-47 401.0 23.2 265 220-500 23-315 (329)
131 cd03289 ABCC_CFTR2 The CFTR su 100.0 4E-42 8.6E-47 387.8 25.8 225 284-511 2-238 (275)
132 cd03245 ABCC_bacteriocin_expor 100.0 4.6E-42 1E-46 378.4 25.6 218 908-1125 2-220 (220)
133 COG3638 ABC-type phosphate/pho 100.0 1.9E-42 4.2E-47 360.3 21.0 212 908-1131 3-236 (258)
134 COG1137 YhbG ABC-type (unclass 100.0 1.7E-43 3.7E-48 357.0 12.0 223 908-1134 4-230 (243)
135 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.9E-42 1.5E-46 381.6 26.0 225 909-1133 1-227 (238)
136 COG1136 SalX ABC-type antimicr 100.0 4.4E-42 9.6E-47 366.1 23.1 203 909-1122 2-221 (226)
137 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-42 3.1E-47 369.0 19.0 197 908-1122 3-212 (248)
138 COG4555 NatA ABC-type Na+ tran 100.0 6.4E-43 1.4E-47 353.3 15.2 216 909-1133 2-223 (245)
139 cd03369 ABCC_NFT1 Domain 2 of 100.0 9.6E-42 2.1E-46 372.1 25.5 207 903-1127 1-207 (207)
140 cd03261 ABC_Org_Solvent_Resist 100.0 6.5E-42 1.4E-46 381.0 23.3 216 909-1133 1-227 (235)
141 COG1245 Predicted ATPase, RNas 100.0 2E-41 4.3E-46 377.8 26.2 183 909-1118 343-531 (591)
142 PRK13631 cbiO cobalt transport 100.0 1.6E-41 3.5E-46 391.5 26.3 220 907-1133 20-266 (320)
143 PRK13537 nodulation ABC transp 100.0 6.5E-42 1.4E-46 393.5 22.7 216 908-1133 7-228 (306)
144 COG1118 CysA ABC-type sulfate/ 100.0 2.9E-42 6.4E-47 370.6 17.9 215 909-1138 3-233 (345)
145 cd03260 ABC_PstB_phosphate_tra 100.0 7.3E-42 1.6E-46 378.6 21.7 209 909-1130 1-227 (227)
146 COG3840 ThiQ ABC-type thiamine 100.0 9.4E-42 2E-46 339.0 19.9 209 909-1134 2-221 (231)
147 PRK11650 ugpC glycerol-3-phosp 100.0 1.5E-41 3.3E-46 396.6 24.8 214 909-1136 4-228 (356)
148 COG4615 PvdE ABC-type sideroph 100.0 5.2E-39 1.1E-43 352.2 43.0 463 635-1124 59-529 (546)
149 PRK14250 phosphate ABC transpo 100.0 4.4E-41 9.5E-46 375.3 26.2 217 908-1134 3-223 (241)
150 PRK11432 fbpC ferric transport 100.0 1.7E-41 3.8E-46 394.9 23.7 216 908-1138 6-232 (351)
151 COG1125 OpuBA ABC-type proline 100.0 6.3E-42 1.4E-46 357.9 17.5 203 284-500 1-227 (309)
152 COG1131 CcmA ABC-type multidru 100.0 1.4E-41 3E-46 386.9 21.4 213 908-1133 4-227 (293)
153 COG1116 TauB ABC-type nitrate/ 100.0 1.7E-41 3.7E-46 360.7 20.6 187 284-485 3-207 (248)
154 PRK11153 metN DL-methionine tr 100.0 3.3E-41 7.1E-46 393.5 24.7 220 909-1135 2-233 (343)
155 COG1127 Ttg2A ABC-type transpo 100.0 3.6E-41 7.9E-46 351.7 22.1 212 282-508 6-246 (263)
156 COG0410 LivF ABC-type branched 100.0 3.5E-41 7.7E-46 352.0 21.8 220 908-1133 3-227 (237)
157 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.1E-41 1.1E-45 362.8 23.2 204 283-501 3-230 (254)
158 TIGR03265 PhnT2 putative 2-ami 100.0 3.6E-41 7.7E-46 393.0 23.6 220 908-1138 4-230 (353)
159 PRK14269 phosphate ABC transpo 100.0 6.2E-41 1.3E-45 375.5 24.3 216 909-1133 3-231 (246)
160 cd03248 ABCC_TAP TAP, the Tran 100.0 6.3E-41 1.4E-45 370.9 24.0 216 906-1121 9-226 (226)
161 PRK13637 cbiO cobalt transport 100.0 6.6E-41 1.4E-45 382.6 24.7 217 909-1132 3-234 (287)
162 PRK13650 cbiO cobalt transport 100.0 4.5E-41 9.8E-46 382.7 23.3 215 908-1133 4-230 (279)
163 cd03219 ABC_Mj1267_LivG_branch 100.0 4E-41 8.7E-46 375.1 21.8 220 909-1132 1-232 (236)
164 PRK13647 cbiO cobalt transport 100.0 4.9E-41 1.1E-45 381.4 22.8 212 908-1131 4-226 (274)
165 TIGR00960 3a0501s02 Type II (G 100.0 2.7E-41 5.8E-46 371.2 19.9 202 909-1121 2-216 (216)
166 PRK13536 nodulation factor exp 100.0 4.8E-41 1E-45 389.9 22.9 216 908-1133 41-262 (340)
167 cd03296 ABC_CysA_sulfate_impor 100.0 1E-40 2.2E-45 372.2 24.6 214 909-1133 3-227 (239)
168 cd03256 ABC_PhnC_transporter A 100.0 6.4E-41 1.4E-45 374.8 22.9 220 909-1131 1-233 (241)
169 cd03263 ABC_subfamily_A The AB 100.0 5.2E-41 1.1E-45 370.1 21.5 214 909-1130 1-219 (220)
170 COG1117 PstB ABC-type phosphat 100.0 8.1E-42 1.8E-46 348.9 13.5 207 283-500 6-239 (253)
171 PRK10851 sulfate/thiosulfate t 100.0 9.2E-41 2E-45 389.6 24.3 217 909-1136 3-230 (353)
172 cd03224 ABC_TM1139_LivF_branch 100.0 6.8E-41 1.5E-45 369.7 22.0 216 909-1132 1-221 (222)
173 TIGR01186 proV glycine betaine 100.0 3.6E-41 7.7E-46 391.9 20.6 205 924-1139 7-226 (363)
174 TIGR00972 3a0107s01c2 phosphat 100.0 1.6E-40 3.5E-45 372.5 25.1 216 909-1133 2-233 (247)
175 TIGR03258 PhnT 2-aminoethylpho 100.0 8.8E-41 1.9E-45 390.1 23.6 221 907-1138 4-234 (362)
176 PRK13635 cbiO cobalt transport 100.0 1.1E-40 2.3E-45 379.4 23.7 214 908-1132 5-229 (279)
177 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-40 2.3E-45 392.5 24.4 212 908-1132 3-228 (402)
178 cd03259 ABC_Carb_Solutes_like 100.0 4.9E-41 1.1E-45 368.3 20.1 206 909-1125 1-213 (213)
179 PRK13643 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 380.4 24.4 217 909-1132 2-233 (288)
180 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-40 2.4E-45 372.7 23.0 217 909-1133 1-226 (242)
181 PRK14242 phosphate transporter 100.0 1.5E-40 3.3E-45 374.2 24.1 217 908-1133 6-238 (253)
182 PRK14273 phosphate ABC transpo 100.0 2E-40 4.4E-45 373.3 25.1 219 908-1135 7-241 (254)
183 PRK13646 cbiO cobalt transport 100.0 1.6E-40 3.4E-45 379.6 24.3 218 909-1133 3-236 (286)
184 PRK09452 potA putrescine/sperm 100.0 1.3E-40 2.7E-45 390.0 24.0 216 908-1138 14-240 (375)
185 TIGR02315 ABC_phnC phosphonate 100.0 1.3E-40 2.7E-45 372.8 23.0 220 909-1131 2-234 (243)
186 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-40 2.3E-45 383.6 22.9 215 909-1133 3-222 (301)
187 COG1120 FepC ABC-type cobalami 100.0 1E-40 2.2E-45 362.7 21.4 202 284-500 2-230 (258)
188 PRK10744 pstB phosphate transp 100.0 2.9E-40 6.3E-45 373.0 25.6 219 907-1134 12-246 (260)
189 cd03258 ABC_MetN_methionine_tr 100.0 1.2E-40 2.6E-45 370.4 22.1 217 909-1132 2-230 (233)
190 PRK11000 maltose/maltodextrin 100.0 1.2E-40 2.5E-45 391.9 22.9 216 909-1135 4-226 (369)
191 PRK14247 phosphate ABC transpo 100.0 1.9E-40 4.2E-45 372.7 23.7 218 908-1134 3-236 (250)
192 PRK13634 cbiO cobalt transport 100.0 1.8E-40 3.9E-45 379.6 23.8 217 909-1132 3-235 (290)
193 PRK14259 phosphate ABC transpo 100.0 4E-40 8.6E-45 373.2 25.9 219 907-1134 12-255 (269)
194 TIGR01288 nodI ATP-binding ABC 100.0 1.6E-40 3.5E-45 382.7 22.9 216 908-1133 4-225 (303)
195 cd03265 ABC_DrrA DrrA is the A 100.0 1.4E-40 3.1E-45 366.4 21.5 208 909-1130 1-219 (220)
196 PRK14235 phosphate transporter 100.0 3.6E-40 7.9E-45 373.3 25.1 219 906-1133 17-252 (267)
197 cd03218 ABC_YhbG The ABC trans 100.0 1.7E-40 3.7E-45 369.1 21.8 215 909-1132 1-222 (232)
198 PRK13651 cobalt transporter AT 100.0 2.9E-40 6.3E-45 379.0 24.2 218 909-1133 3-255 (305)
199 PRK14267 phosphate ABC transpo 100.0 2.4E-40 5.3E-45 372.5 23.2 217 908-1133 4-238 (253)
200 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.8E-40 6.1E-45 368.0 23.3 215 909-1133 2-222 (236)
201 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.5E-40 3.2E-45 366.0 20.8 206 909-1121 1-218 (218)
202 COG0411 LivG ABC-type branched 100.0 6.4E-41 1.4E-45 352.7 16.7 220 909-1134 5-241 (250)
203 cd03226 ABC_cobalt_CbiO_domain 100.0 1.6E-40 3.4E-45 361.9 20.3 198 910-1122 1-205 (205)
204 PRK13636 cbiO cobalt transport 100.0 3.4E-40 7.3E-45 376.3 23.9 217 908-1132 5-231 (283)
205 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.1E-39 4.6E-44 367.0 29.8 240 260-506 16-255 (282)
206 cd03268 ABC_BcrA_bacitracin_re 100.0 2.4E-40 5.1E-45 361.5 21.3 202 909-1125 1-208 (208)
207 TIGR03411 urea_trans_UrtD urea 100.0 4.1E-40 8.9E-45 368.3 23.6 220 909-1132 3-231 (242)
208 PRK11629 lolD lipoprotein tran 100.0 3.5E-40 7.6E-45 366.5 22.8 212 908-1126 5-228 (233)
209 PRK11831 putative ABC transpor 100.0 3.2E-40 7E-45 374.2 22.8 217 908-1133 7-234 (269)
210 cd03266 ABC_NatA_sodium_export 100.0 2.6E-40 5.7E-45 363.9 21.4 209 909-1125 2-218 (218)
211 PRK13652 cbiO cobalt transport 100.0 5.8E-40 1.2E-44 373.5 24.6 212 909-1132 4-227 (277)
212 PRK10070 glycine betaine trans 100.0 3.5E-40 7.5E-45 387.9 23.5 223 909-1138 5-260 (400)
213 cd03264 ABC_drug_resistance_li 100.0 2.3E-40 5E-45 362.4 20.5 202 909-1125 1-211 (211)
214 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.9E-40 4.2E-45 375.8 20.5 217 910-1135 26-253 (269)
215 PRK14274 phosphate ABC transpo 100.0 6.4E-40 1.4E-44 370.2 24.6 218 908-1134 12-245 (259)
216 COG1122 CbiO ABC-type cobalt t 100.0 2.8E-40 6E-45 360.2 20.8 204 284-500 3-230 (235)
217 PRK10895 lipopolysaccharide AB 100.0 4.9E-40 1.1E-44 367.3 23.3 215 909-1132 4-226 (241)
218 PRK14268 phosphate ABC transpo 100.0 4.4E-40 9.5E-45 371.2 22.8 218 908-1134 12-244 (258)
219 PRK10575 iron-hydroxamate tran 100.0 3.7E-40 8.1E-45 373.0 22.3 212 908-1132 11-237 (265)
220 PRK11264 putative amino-acid A 100.0 1.2E-39 2.5E-44 366.5 26.2 216 909-1133 4-234 (250)
221 PRK15079 oligopeptide ABC tran 100.0 4.2E-40 9E-45 381.2 23.2 226 908-1140 8-259 (331)
222 PRK13644 cbiO cobalt transport 100.0 6.7E-40 1.5E-44 372.1 24.4 216 909-1132 2-224 (274)
223 cd03250 ABCC_MRP_domain1 Domai 100.0 5.8E-40 1.3E-44 357.2 22.9 199 909-1120 1-204 (204)
224 cd03247 ABCC_cytochrome_bd The 100.0 4.5E-40 9.8E-45 349.9 21.6 178 909-1125 1-178 (178)
225 PRK13632 cbiO cobalt transport 100.0 6.3E-40 1.4E-44 372.2 24.0 218 908-1132 7-231 (271)
226 PRK09493 glnQ glutamine ABC tr 100.0 6.8E-40 1.5E-44 366.0 23.7 216 909-1133 2-226 (240)
227 PRK13640 cbiO cobalt transport 100.0 6.5E-40 1.4E-44 373.8 23.8 214 908-1132 5-232 (282)
228 TIGR03005 ectoine_ehuA ectoine 100.0 6.6E-40 1.4E-44 368.7 23.3 217 909-1134 1-238 (252)
229 TIGR02211 LolD_lipo_ex lipopro 100.0 5.5E-40 1.2E-44 362.2 22.2 207 909-1122 2-220 (221)
230 PRK11607 potG putrescine trans 100.0 6.3E-40 1.4E-44 384.9 24.1 220 908-1138 19-245 (377)
231 PRK10619 histidine/lysine/argi 100.0 1E-39 2.2E-44 368.2 24.7 218 907-1133 4-242 (257)
232 PRK13641 cbiO cobalt transport 100.0 7.3E-40 1.6E-44 374.3 23.9 217 909-1132 3-234 (287)
233 PRK11614 livF leucine/isoleuci 100.0 7.9E-40 1.7E-44 364.7 23.5 217 908-1132 5-226 (237)
234 PRK14240 phosphate transporter 100.0 9.4E-40 2E-44 367.1 24.2 218 907-1133 2-235 (250)
235 cd03301 ABC_MalK_N The N-termi 100.0 5.1E-40 1.1E-44 360.3 21.3 206 909-1125 1-213 (213)
236 PRK14245 phosphate ABC transpo 100.0 6.5E-40 1.4E-44 368.3 22.6 218 908-1134 3-236 (250)
237 PRK13649 cbiO cobalt transport 100.0 8.1E-40 1.8E-44 373.5 23.7 217 909-1132 3-234 (280)
238 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.1E-40 6.7E-45 363.8 19.5 208 909-1128 1-219 (220)
239 PRK14248 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 370.0 24.6 217 908-1133 21-253 (268)
240 TIGR02769 nickel_nikE nickel i 100.0 1.3E-39 2.8E-44 368.6 25.0 218 909-1133 3-241 (265)
241 cd03225 ABC_cobalt_CbiO_domain 100.0 4.9E-40 1.1E-44 359.9 20.8 204 910-1120 1-211 (211)
242 TIGR03410 urea_trans_UrtE urea 100.0 4.6E-40 9.9E-45 365.0 20.8 212 909-1131 1-220 (230)
243 TIGR01188 drrA daunorubicin re 100.0 4.6E-40 9.9E-45 378.8 21.4 207 917-1133 2-214 (302)
244 PRK14239 phosphate transporter 100.0 9.6E-40 2.1E-44 367.6 23.5 218 908-1134 5-238 (252)
245 PRK13548 hmuV hemin importer A 100.0 1.7E-39 3.6E-44 366.1 25.3 211 909-1132 3-230 (258)
246 cd03252 ABCC_Hemolysin The ABC 100.0 2.3E-39 4.9E-44 361.1 26.1 221 285-507 1-234 (237)
247 PRK11231 fecE iron-dicitrate t 100.0 8.9E-40 1.9E-44 368.1 23.1 211 909-1132 3-227 (255)
248 cd03257 ABC_NikE_OppD_transpor 100.0 6.3E-40 1.4E-44 363.6 21.5 211 909-1125 2-228 (228)
249 PRK11124 artP arginine transpo 100.0 1.1E-39 2.4E-44 364.7 23.6 215 909-1132 3-230 (242)
250 PRK11308 dppF dipeptide transp 100.0 1.3E-39 2.9E-44 376.7 24.7 227 908-1141 5-253 (327)
251 PRK10253 iron-enterobactin tra 100.0 1E-39 2.2E-44 369.5 23.2 212 908-1132 7-233 (265)
252 PRK13648 cbiO cobalt transport 100.0 1.7E-39 3.7E-44 368.4 25.1 219 908-1133 7-232 (269)
253 PRK14251 phosphate ABC transpo 100.0 9.5E-40 2.1E-44 367.3 22.7 218 908-1134 4-237 (251)
254 PRK11247 ssuB aliphatic sulfon 100.0 1.5E-39 3.2E-44 364.7 24.1 203 908-1128 12-219 (257)
255 PRK14237 phosphate transporter 100.0 1.7E-39 3.6E-44 367.9 24.8 217 908-1133 20-252 (267)
256 cd03291 ABCC_CFTR1 The CFTR su 100.0 4.4E-39 9.6E-44 364.4 28.0 211 906-1133 37-248 (282)
257 PRK14256 phosphate ABC transpo 100.0 1.7E-39 3.7E-44 365.4 24.4 219 907-1134 3-238 (252)
258 PRK14243 phosphate transporter 100.0 2.3E-39 5.1E-44 366.1 25.6 218 908-1134 10-250 (264)
259 PRK13642 cbiO cobalt transport 100.0 1.3E-39 2.8E-44 370.6 23.6 215 908-1133 4-230 (277)
260 COG1118 CysA ABC-type sulfate/ 100.0 4.2E-40 9E-45 354.1 18.3 203 284-500 2-229 (345)
261 PRK11022 dppD dipeptide transp 100.0 1.5E-39 3.2E-44 376.6 24.4 225 909-1141 4-252 (326)
262 PRK14238 phosphate transporter 100.0 2.1E-39 4.6E-44 367.7 25.0 219 907-1134 23-257 (271)
263 PRK13633 cobalt transporter AT 100.0 1.4E-39 3.1E-44 370.9 23.7 215 908-1133 4-234 (280)
264 TIGR02673 FtsE cell division A 100.0 5.7E-40 1.2E-44 360.2 19.5 200 909-1120 2-214 (214)
265 PRK13645 cbiO cobalt transport 100.0 1.5E-39 3.2E-44 372.7 23.6 219 907-1132 5-240 (289)
266 COG4615 PvdE ABC-type sideroph 100.0 1.9E-37 4.1E-42 340.0 38.7 436 37-490 74-529 (546)
267 PRK14249 phosphate ABC transpo 100.0 2.5E-39 5.4E-44 363.8 24.8 218 908-1134 4-237 (251)
268 PRK14262 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 365.3 23.2 217 908-1133 3-235 (250)
269 cd03246 ABCC_Protease_Secretio 100.0 1.5E-39 3.2E-44 344.1 21.6 172 909-1121 1-173 (173)
270 PRK14270 phosphate ABC transpo 100.0 2.3E-39 5.1E-44 364.0 24.4 217 908-1133 4-236 (251)
271 PRK14244 phosphate ABC transpo 100.0 9.1E-40 2E-44 367.3 21.1 217 909-1134 6-239 (251)
272 PRK13638 cbiO cobalt transport 100.0 1.7E-39 3.6E-44 368.9 23.2 216 909-1133 2-226 (271)
273 cd03235 ABC_Metallic_Cations A 100.0 7.4E-40 1.6E-44 359.0 19.3 201 910-1125 1-213 (213)
274 cd03292 ABC_FtsE_transporter F 100.0 1E-39 2.2E-44 358.2 20.5 205 909-1121 1-214 (214)
275 COG3839 MalK ABC-type sugar tr 100.0 1.2E-39 2.6E-44 367.5 21.5 203 284-500 3-225 (338)
276 COG3842 PotA ABC-type spermidi 100.0 6E-40 1.3E-44 371.9 19.1 203 283-500 4-228 (352)
277 PRK14253 phosphate ABC transpo 100.0 2.8E-39 6.2E-44 363.0 24.2 217 908-1133 3-234 (249)
278 PRK14236 phosphate transporter 100.0 3.2E-39 6.9E-44 366.6 24.8 218 907-1133 24-257 (272)
279 COG1136 SalX ABC-type antimicr 100.0 1.9E-39 4.1E-44 346.0 21.4 193 285-488 2-221 (226)
280 PRK14261 phosphate ABC transpo 100.0 3.1E-39 6.7E-44 363.5 24.3 218 908-1134 6-239 (253)
281 PRK10584 putative ABC transpor 100.0 2.2E-39 4.8E-44 359.0 22.8 210 908-1124 6-227 (228)
282 PRK11300 livG leucine/isoleuci 100.0 2.5E-39 5.5E-44 364.9 23.5 221 908-1132 5-243 (255)
283 TIGR03415 ABC_choXWV_ATP choli 100.0 1.5E-39 3.2E-44 379.8 22.2 209 924-1139 38-261 (382)
284 cd03290 ABCC_SUR1_N The SUR do 100.0 2.8E-39 6E-44 355.6 23.1 210 910-1120 2-218 (218)
285 PRK10247 putative ABC transpor 100.0 2.1E-39 4.6E-44 358.0 22.1 210 908-1128 7-223 (225)
286 PRK14254 phosphate ABC transpo 100.0 4.8E-39 1E-43 366.7 25.7 218 907-1133 38-270 (285)
287 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.2E-39 4.8E-44 354.7 21.9 200 909-1125 1-211 (211)
288 TIGR03873 F420-0_ABC_ATP propo 100.0 2.7E-39 5.9E-44 364.5 23.2 219 909-1132 2-226 (256)
289 cd03269 ABC_putative_ATPase Th 100.0 1.1E-39 2.4E-44 356.7 19.5 204 909-1125 1-210 (210)
290 PRK11701 phnK phosphonate C-P 100.0 6.1E-39 1.3E-43 362.0 26.0 219 908-1135 6-244 (258)
291 PRK14260 phosphate ABC transpo 100.0 3.2E-39 7E-44 364.3 23.5 218 908-1134 7-245 (259)
292 PRK14241 phosphate transporter 100.0 3E-39 6.6E-44 364.5 23.3 217 908-1133 4-243 (258)
293 PRK10908 cell division protein 100.0 3.6E-39 7.8E-44 355.8 23.2 207 909-1123 2-217 (222)
294 COG4175 ProV ABC-type proline/ 100.0 1.1E-39 2.4E-44 350.3 18.4 222 908-1140 4-262 (386)
295 COG4178 ABC-type uncharacteriz 100.0 8E-36 1.7E-40 355.3 53.1 446 31-484 106-588 (604)
296 PRK10771 thiQ thiamine transpo 100.0 5.9E-39 1.3E-43 356.4 24.8 208 909-1133 2-220 (232)
297 PRK14271 phosphate ABC transpo 100.0 8.5E-39 1.8E-43 363.2 26.5 220 908-1134 21-253 (276)
298 COG3840 ThiQ ABC-type thiamine 100.0 1.6E-39 3.6E-44 323.0 17.9 199 285-500 2-221 (231)
299 PRK13639 cbiO cobalt transport 100.0 3.7E-39 8E-44 366.5 23.2 216 909-1132 2-226 (275)
300 PRK09473 oppD oligopeptide tra 100.0 4E-39 8.7E-44 373.2 23.9 226 908-1141 12-260 (330)
301 PRK14265 phosphate ABC transpo 100.0 6.8E-39 1.5E-43 363.9 25.2 218 908-1134 20-260 (274)
302 TIGR01257 rim_protein retinal- 100.0 8.5E-40 1.8E-44 436.5 20.7 224 908-1139 928-1156(2272)
303 cd03262 ABC_HisP_GlnQ_permease 100.0 2.2E-39 4.8E-44 355.3 20.2 204 909-1121 1-213 (213)
304 PRK14252 phosphate ABC transpo 100.0 5.9E-39 1.3E-43 363.4 24.3 220 905-1133 13-250 (265)
305 PRK14266 phosphate ABC transpo 100.0 5.5E-39 1.2E-43 360.9 23.8 218 909-1135 4-237 (250)
306 PRK14275 phosphate ABC transpo 100.0 6E-39 1.3E-43 366.3 24.5 218 908-1134 39-272 (286)
307 cd03250 ABCC_MRP_domain1 Domai 100.0 6.7E-39 1.5E-43 348.9 23.7 201 285-486 1-204 (204)
308 PRK15112 antimicrobial peptide 100.0 5E-39 1.1E-43 364.0 23.2 217 908-1134 4-241 (267)
309 PRK00349 uvrA excinuclease ABC 100.0 2E-38 4.3E-43 403.4 31.3 102 1034-1135 818-930 (943)
310 TIGR00968 3a0106s01 sulfate AB 100.0 6E-39 1.3E-43 357.2 23.3 214 909-1133 1-221 (237)
311 PRK14272 phosphate ABC transpo 100.0 8.1E-39 1.8E-43 360.1 24.6 217 909-1134 5-238 (252)
312 PRK14263 phosphate ABC transpo 100.0 7.4E-39 1.6E-43 361.0 24.0 218 908-1134 8-247 (261)
313 cd03300 ABC_PotA_N PotA is an 100.0 2.9E-39 6.2E-44 358.8 20.4 214 909-1133 1-221 (232)
314 COG2884 FtsE Predicted ATPase 100.0 2E-39 4.4E-44 325.5 17.2 195 284-491 1-219 (223)
315 PRK15093 antimicrobial peptide 100.0 6.3E-39 1.4E-43 372.7 24.1 224 909-1140 4-256 (330)
316 PRK13547 hmuV hemin importer A 100.0 8.6E-39 1.9E-43 361.5 24.3 220 909-1132 2-244 (272)
317 TIGR01978 sufC FeS assembly AT 100.0 5.1E-39 1.1E-43 359.9 22.0 215 909-1132 1-234 (243)
318 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.6E-38 3.5E-43 354.5 25.7 220 285-505 1-233 (238)
319 cd03288 ABCC_SUR2 The SUR doma 100.0 2.6E-38 5.5E-43 356.4 27.0 225 282-508 17-254 (257)
320 PRK09984 phosphonate/organopho 100.0 1.1E-38 2.4E-43 360.7 23.9 219 908-1130 4-240 (262)
321 PRK14258 phosphate ABC transpo 100.0 9.5E-39 2.1E-43 360.7 23.3 218 908-1134 7-247 (261)
322 cd03253 ABCC_ATM1_transporter 100.0 2.3E-38 5.1E-43 352.9 26.0 220 285-507 1-233 (236)
323 PRK11144 modC molybdate transp 100.0 7.6E-39 1.6E-43 375.0 22.9 211 909-1135 2-221 (352)
324 TIGR02314 ABC_MetN D-methionin 100.0 6E-39 1.3E-43 371.6 21.3 204 285-499 2-231 (343)
325 cd03251 ABCC_MsbA MsbA is an e 100.0 1.8E-38 4E-43 353.2 24.4 217 285-503 1-230 (234)
326 PRK11248 tauB taurine transpor 100.0 9.4E-39 2E-43 358.9 22.1 206 909-1128 2-216 (255)
327 TIGR01277 thiQ thiamine ABC tr 100.0 9.7E-39 2.1E-43 349.9 21.6 201 909-1126 1-212 (213)
328 PRK14264 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 365.5 24.7 219 906-1133 43-290 (305)
329 COG3638 ABC-type phosphate/pho 100.0 4.6E-39 9.9E-44 335.1 17.6 202 283-497 2-236 (258)
330 PRK14255 phosphate ABC transpo 100.0 1.3E-38 2.8E-43 358.4 22.8 218 908-1134 5-238 (252)
331 PRK14246 phosphate ABC transpo 100.0 1.7E-38 3.7E-43 357.2 23.5 219 908-1135 10-244 (257)
332 cd03254 ABCC_Glucan_exporter_l 100.0 2.4E-38 5.2E-43 351.1 24.2 213 284-499 2-227 (229)
333 cd03299 ABC_ModC_like Archeal 100.0 1.6E-38 3.5E-43 353.3 22.6 213 909-1133 1-220 (235)
334 COG1124 DppF ABC-type dipeptid 100.0 2.4E-38 5.3E-43 332.8 22.3 206 283-499 2-232 (252)
335 cd03228 ABCC_MRP_Like The MRP 100.0 1.7E-38 3.7E-43 335.4 21.1 171 909-1120 1-171 (171)
336 cd03244 ABCC_MRP_domain2 Domai 100.0 3.2E-38 6.9E-43 348.2 24.2 207 284-492 2-220 (221)
337 PRK13631 cbiO cobalt transport 100.0 4.1E-38 8.8E-43 363.3 24.5 211 281-501 18-268 (320)
338 TIGR03740 galliderm_ABC gallid 100.0 2.8E-38 6E-43 349.0 22.1 204 909-1129 1-210 (223)
339 cd03261 ABC_Org_Solvent_Resist 100.0 2E-38 4.4E-43 352.9 21.2 201 285-499 1-227 (235)
340 cd03229 ABC_Class3 This class 100.0 2.9E-38 6.3E-43 335.9 20.8 172 909-1120 1-178 (178)
341 TIGR02323 CP_lyasePhnK phospho 100.0 3.8E-38 8.3E-43 354.7 22.9 218 908-1134 3-240 (253)
342 PRK10419 nikE nickel transport 100.0 5.6E-38 1.2E-42 355.4 24.4 227 909-1140 4-248 (268)
343 TIGR02142 modC_ABC molybdenum 100.0 2.9E-38 6.3E-43 370.7 22.8 212 913-1135 4-224 (354)
344 PRK10418 nikD nickel transport 100.0 4.5E-38 9.7E-43 353.9 23.2 214 908-1134 4-232 (254)
345 COG4559 ABC-type hemin transpo 100.0 2.6E-38 5.6E-43 322.4 18.8 212 909-1133 2-231 (259)
346 TIGR02982 heterocyst_DevA ABC 100.0 2.8E-38 6.1E-43 348.0 20.5 206 909-1121 2-219 (220)
347 cd03230 ABC_DR_subfamily_A Thi 100.0 3.6E-38 7.8E-43 333.6 20.1 170 909-1121 1-173 (173)
348 PRK11650 ugpC glycerol-3-phosp 100.0 5.1E-38 1.1E-42 366.9 23.4 203 284-499 3-225 (356)
349 PRK00635 excinuclease ABC subu 100.0 5.5E-37 1.2E-41 403.4 35.6 210 908-1132 600-906 (1809)
350 cd03245 ABCC_bacteriocin_expor 100.0 1.5E-37 3.2E-42 342.6 25.0 206 284-491 2-220 (220)
351 cd03297 ABC_ModC_molybdenum_tr 100.0 5.4E-38 1.2E-42 344.4 21.1 201 913-1125 5-214 (214)
352 cd03234 ABCG_White The White s 100.0 4.1E-38 8.9E-43 348.2 20.3 212 909-1125 4-226 (226)
353 PRK09544 znuC high-affinity zi 100.0 7.6E-38 1.7E-42 350.2 22.6 200 908-1132 4-209 (251)
354 PRK11432 fbpC ferric transport 100.0 7.1E-38 1.5E-42 364.6 22.6 203 283-499 5-227 (351)
355 PRK13650 cbiO cobalt transport 100.0 8.1E-38 1.8E-42 356.0 22.4 206 284-500 4-231 (279)
356 cd03217 ABC_FeS_Assembly ABC-t 100.0 1E-37 2.2E-42 338.0 21.9 185 909-1131 1-192 (200)
357 COG0444 DppD ABC-type dipeptid 100.0 7.7E-38 1.7E-42 344.0 20.9 228 909-1144 2-255 (316)
358 COG4178 ABC-type uncharacteriz 100.0 8.9E-35 1.9E-39 346.4 48.2 468 626-1117 88-587 (604)
359 PRK13651 cobalt transporter AT 100.0 1.6E-37 3.4E-42 356.4 23.8 206 284-500 2-256 (305)
360 cd03233 ABC_PDR_domain1 The pl 100.0 9.8E-38 2.1E-42 338.5 20.6 189 909-1125 4-202 (202)
361 PRK15056 manganese/iron transp 100.0 2E-37 4.3E-42 351.9 23.3 209 908-1132 6-230 (272)
362 cd03214 ABC_Iron-Siderophores_ 100.0 1.2E-37 2.6E-42 331.7 20.1 177 910-1125 1-180 (180)
363 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-37 2.5E-42 363.6 21.7 204 283-500 3-226 (353)
364 PRK13637 cbiO cobalt transport 100.0 1.4E-37 3E-42 355.3 21.9 207 284-499 2-235 (287)
365 cd03213 ABCG_EPDR ABCG transpo 100.0 1.1E-37 2.4E-42 335.9 19.7 182 908-1125 3-194 (194)
366 PRK13643 cbiO cobalt transport 100.0 2.5E-37 5.4E-42 353.4 23.7 206 285-500 2-235 (288)
367 PRK11153 metN DL-methionine tr 100.0 2E-37 4.3E-42 361.7 22.5 204 285-499 2-231 (343)
368 COG4619 ABC-type uncharacteriz 100.0 4.6E-38 1E-42 308.2 14.1 194 922-1121 15-212 (223)
369 PRK09452 potA putrescine/sperm 100.0 2.7E-37 5.9E-42 361.9 23.4 203 283-499 13-235 (375)
370 cd03296 ABC_CysA_sulfate_impor 100.0 3.2E-37 7E-42 344.0 22.9 202 284-499 2-227 (239)
371 cd03215 ABC_Carb_Monos_II This 100.0 1.4E-37 3E-42 331.9 19.0 172 908-1121 4-182 (182)
372 PRK13537 nodulation ABC transp 100.0 1.9E-37 4E-42 356.6 21.3 203 283-499 6-228 (306)
373 PRK13647 cbiO cobalt transport 100.0 2.2E-37 4.8E-42 351.5 21.7 201 284-497 4-226 (274)
374 TIGR00630 uvra excinuclease AB 100.0 1.5E-36 3.3E-41 385.6 31.3 97 1034-1130 816-923 (924)
375 PRK13634 cbiO cobalt transport 100.0 4E-37 8.7E-42 352.0 23.6 207 285-501 3-238 (290)
376 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-37 2.7E-42 342.2 18.6 191 285-487 2-216 (216)
377 cd03219 ABC_Mj1267_LivG_branch 100.0 2.2E-37 4.8E-42 345.0 20.9 200 285-498 1-232 (236)
378 cd03259 ABC_Carb_Solutes_like 100.0 2E-37 4.4E-42 339.7 20.2 193 285-491 1-213 (213)
379 PRK15439 autoinducer 2 ABC tra 100.0 4.9E-37 1.1E-41 378.9 25.9 215 908-1132 11-229 (510)
380 TIGR03608 L_ocin_972_ABC putat 100.0 1.4E-37 3E-42 339.3 18.6 197 911-1116 1-206 (206)
381 CHL00131 ycf16 sulfate ABC tra 100.0 4E-37 8.6E-42 346.4 22.7 217 908-1130 7-239 (252)
382 cd03267 ABC_NatA_like Similar 100.0 1.4E-37 3.1E-42 345.8 18.8 194 924-1125 35-236 (236)
383 COG4152 ABC-type uncharacteriz 100.0 4.3E-38 9.4E-43 326.9 13.5 213 909-1134 3-221 (300)
384 cd03260 ABC_PstB_phosphate_tra 100.0 3.2E-37 6.9E-42 341.6 21.5 198 285-495 1-226 (227)
385 PRK13646 cbiO cobalt transport 100.0 4.6E-37 1E-41 351.0 23.3 208 284-501 2-238 (286)
386 PRK10851 sulfate/thiosulfate t 100.0 3.7E-37 8.1E-42 359.3 22.9 202 284-499 2-227 (353)
387 cd03226 ABC_cobalt_CbiO_domain 100.0 3.2E-37 6.9E-42 336.0 20.8 190 286-488 1-205 (205)
388 cd03232 ABC_PDR_domain2 The pl 100.0 2E-37 4.4E-42 333.4 19.1 181 908-1125 3-192 (192)
389 TIGR03258 PhnT 2-aminoethylpho 100.0 3E-37 6.6E-42 360.4 22.0 203 283-499 4-229 (362)
390 cd03223 ABCD_peroxisomal_ALDP 100.0 3.6E-37 7.8E-42 323.2 20.1 163 909-1119 1-163 (166)
391 PRK11000 maltose/maltodextrin 100.0 4E-37 8.6E-42 362.0 22.6 202 284-499 3-224 (369)
392 PRK13635 cbiO cobalt transport 100.0 8.3E-37 1.8E-41 347.4 24.1 207 284-502 5-233 (279)
393 cd03216 ABC_Carb_Monos_I This 100.0 5.9E-37 1.3E-41 320.6 20.9 159 909-1123 1-162 (163)
394 PRK14250 phosphate ABC transpo 100.0 1.1E-36 2.3E-41 340.1 24.3 203 284-499 3-222 (241)
395 PRK03695 vitamin B12-transport 100.0 5.9E-37 1.3E-41 343.3 22.4 209 910-1132 2-222 (248)
396 cd03265 ABC_DrrA DrrA is the A 100.0 3.9E-37 8.4E-42 339.1 20.5 198 285-496 1-219 (220)
397 PRK09580 sufC cysteine desulfu 100.0 4.6E-37 1E-41 345.1 21.4 218 909-1130 2-233 (248)
398 PRK09536 btuD corrinoid ABC tr 100.0 6E-37 1.3E-41 360.8 23.2 203 284-500 3-230 (402)
399 cd03290 ABCC_SUR1_N The SUR do 100.0 9.5E-37 2.1E-41 335.5 22.9 199 286-486 2-218 (218)
400 PRK11629 lolD lipoprotein tran 100.0 6E-37 1.3E-41 340.5 21.6 199 283-492 4-228 (233)
401 PRK13549 xylose transporter AT 100.0 4.8E-37 1E-41 379.3 22.8 215 908-1131 5-231 (506)
402 PRK11247 ssuB aliphatic sulfon 100.0 1E-36 2.2E-41 341.7 23.4 198 283-494 11-219 (257)
403 TIGR02315 ABC_phnC phosphonate 100.0 5.8E-37 1.3E-41 343.2 21.4 200 285-497 2-234 (243)
404 cd03231 ABC_CcmA_heme_exporter 100.0 7.4E-37 1.6E-41 331.6 21.3 194 909-1116 1-198 (201)
405 PRK10762 D-ribose transporter 100.0 6.8E-37 1.5E-41 377.4 23.8 215 908-1131 4-229 (501)
406 TIGR01186 proV glycine betaine 100.0 3.5E-37 7.7E-42 358.5 20.0 190 299-499 5-220 (363)
407 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.7E-37 8.1E-42 338.9 19.1 192 285-487 1-218 (218)
408 cd03258 ABC_MetN_methionine_tr 100.0 6.4E-37 1.4E-41 340.5 21.1 203 285-498 2-230 (233)
409 TIGR01184 ntrCD nitrate transp 100.0 3E-37 6.5E-42 341.8 18.4 194 926-1131 1-203 (230)
410 TIGR02770 nickel_nikD nickel i 100.0 6.1E-37 1.3E-41 339.7 20.8 201 925-1134 1-217 (230)
411 PRK09700 D-allose transporter 100.0 6E-37 1.3E-41 379.0 23.1 216 908-1132 5-234 (510)
412 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.8E-37 1.3E-41 337.7 20.4 198 285-493 1-218 (220)
413 cd03256 ABC_PhnC_transporter A 100.0 8E-37 1.7E-41 341.7 21.8 200 285-497 1-233 (241)
414 PRK13644 cbiO cobalt transport 100.0 9.3E-37 2E-41 346.4 22.7 202 285-499 2-225 (274)
415 cd03248 ABCC_TAP TAP, the Tran 100.0 1.2E-36 2.7E-41 336.6 23.1 205 282-487 9-226 (226)
416 TIGR01288 nodI ATP-binding ABC 100.0 7.2E-37 1.6E-41 352.4 21.9 202 283-498 3-224 (303)
417 cd03268 ABC_BcrA_bacitracin_re 100.0 9.7E-37 2.1E-41 333.0 21.5 193 285-491 1-208 (208)
418 PRK13636 cbiO cobalt transport 100.0 1.2E-36 2.6E-41 347.2 23.1 205 284-501 5-234 (283)
419 PRK13536 nodulation factor exp 100.0 6.8E-37 1.5E-41 355.3 21.2 203 283-499 40-262 (340)
420 COG1123 ATPase components of v 100.0 6.8E-37 1.5E-41 360.1 21.3 226 908-1142 5-254 (539)
421 cd03369 ABCC_NFT1 Domain 2 of 100.0 2E-36 4.3E-41 330.2 23.6 190 283-492 5-206 (207)
422 COG4598 HisP ABC-type histidin 100.0 2.8E-37 6E-42 305.5 15.0 220 908-1136 6-245 (256)
423 PRK11607 potG putrescine trans 100.0 9.8E-37 2.1E-41 358.0 22.4 204 282-499 17-240 (377)
424 cd03235 ABC_Metallic_Cations A 100.0 8.6E-37 1.9E-41 334.7 20.4 190 286-490 1-212 (213)
425 cd03218 ABC_YhbG The ABC trans 100.0 1.1E-36 2.5E-41 338.4 21.6 200 285-498 1-222 (232)
426 PRK13641 cbiO cobalt transport 100.0 2E-36 4.2E-41 346.1 23.7 205 284-499 2-235 (287)
427 PRK13538 cytochrome c biogenes 100.0 1.3E-36 2.7E-41 330.8 20.9 194 909-1116 2-202 (204)
428 PRK14273 phosphate ABC transpo 100.0 1.5E-36 3.2E-41 341.9 22.2 206 283-499 6-239 (254)
429 cd03301 ABC_MalK_N The N-termi 100.0 1E-36 2.2E-41 334.2 20.2 193 285-491 1-213 (213)
430 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-36 2.6E-41 335.9 20.9 200 285-497 1-220 (222)
431 PRK14242 phosphate transporter 100.0 1.6E-36 3.4E-41 341.6 22.2 206 283-499 5-238 (253)
432 PRK13633 cobalt transporter AT 100.0 2.4E-36 5.2E-41 344.3 23.8 207 284-501 4-236 (280)
433 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.7E-36 3.7E-41 337.6 21.9 201 285-499 2-222 (236)
434 PRK13642 cbiO cobalt transport 100.0 2.3E-36 5E-41 343.9 23.3 207 284-501 4-232 (277)
435 PRK13640 cbiO cobalt transport 100.0 2.8E-36 6.1E-41 343.9 24.0 206 283-500 4-234 (282)
436 PRK00635 excinuclease ABC subu 100.0 7.1E-35 1.5E-39 383.6 40.5 94 1039-1132 1381-1483(1809)
437 COG4181 Predicted ABC-type tra 100.0 7.9E-37 1.7E-41 300.5 16.4 209 908-1124 6-227 (228)
438 PRK13540 cytochrome c biogenes 100.0 1.9E-36 4.2E-41 328.3 21.0 195 909-1115 2-198 (200)
439 TIGR00972 3a0107s01c2 phosphat 100.0 2.5E-36 5.5E-41 338.6 22.4 205 284-499 1-233 (247)
440 PRK14269 phosphate ABC transpo 100.0 1.6E-36 3.5E-41 339.8 20.9 205 284-499 2-231 (246)
441 COG1131 CcmA ABC-type multidru 100.0 2.2E-36 4.8E-41 344.2 22.2 203 284-499 4-227 (293)
442 cd03263 ABC_subfamily_A The AB 100.0 2E-36 4.3E-41 333.7 21.1 199 285-496 1-219 (220)
443 PRK10938 putative molybdenum t 100.0 2.1E-36 4.6E-41 372.5 23.7 210 909-1132 4-224 (490)
444 TIGR02211 LolD_lipo_ex lipopro 100.0 1.8E-36 3.9E-41 334.2 20.7 193 285-488 2-220 (221)
445 PRK11831 putative ABC transpor 100.0 2.1E-36 4.5E-41 343.1 21.6 203 283-499 6-234 (269)
446 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.4E-36 3E-41 344.2 20.2 200 286-499 26-251 (269)
447 PRK13632 cbiO cobalt transport 100.0 4.1E-36 9E-41 340.9 24.0 206 283-500 6-233 (271)
448 cd03266 ABC_NatA_sodium_export 100.0 2.1E-36 4.5E-41 333.0 20.8 196 285-491 2-218 (218)
449 PRK10982 galactose/methyl gala 100.0 1.5E-36 3.3E-41 373.6 21.8 212 911-1131 1-222 (491)
450 PRK11264 putative amino-acid A 100.0 1.4E-36 3.1E-41 341.5 19.7 202 284-499 3-234 (250)
451 PRK09493 glnQ glutamine ABC tr 100.0 3.4E-36 7.4E-41 336.1 22.3 201 285-499 2-226 (240)
452 PRK10584 putative ABC transpor 100.0 3.9E-36 8.5E-41 333.1 22.4 197 283-490 5-227 (228)
453 PRK13543 cytochrome c biogenes 100.0 3.6E-36 7.8E-41 329.6 21.8 195 908-1118 11-212 (214)
454 PRK10619 histidine/lysine/argi 100.0 3.1E-36 6.8E-41 339.7 21.8 204 283-499 4-242 (257)
455 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-36 4.8E-41 338.0 20.3 204 285-499 1-226 (242)
456 PRK13649 cbiO cobalt transport 100.0 3.8E-36 8.3E-41 343.2 22.7 207 284-500 2-236 (280)
457 cd03269 ABC_putative_ATPase Th 100.0 2.4E-36 5.2E-41 330.4 20.1 193 285-491 1-210 (210)
458 PRK11288 araG L-arabinose tran 100.0 2.8E-36 6.1E-41 372.0 22.8 211 908-1127 4-224 (501)
459 PRK11614 livF leucine/isoleuci 100.0 5.6E-36 1.2E-40 333.8 23.1 203 283-499 4-227 (237)
460 PRK10744 pstB phosphate transp 100.0 6E-36 1.3E-40 337.9 23.4 206 283-499 12-245 (260)
461 TIGR02673 FtsE cell division A 100.0 2.3E-36 5E-41 331.6 19.4 189 285-486 2-214 (214)
462 PRK11124 artP arginine transpo 100.0 5.9E-36 1.3E-40 334.7 23.0 201 284-498 2-230 (242)
463 PRK11231 fecE iron-dicitrate t 100.0 5.2E-36 1.1E-40 337.6 22.6 201 284-498 2-227 (255)
464 PRK13638 cbiO cobalt transport 100.0 5.5E-36 1.2E-40 340.1 22.9 202 285-500 2-227 (271)
465 COG0410 LivF ABC-type branched 100.0 4.5E-36 9.7E-41 313.8 20.2 212 283-502 2-230 (237)
466 PRK13652 cbiO cobalt transport 100.0 7.3E-36 1.6E-40 339.8 23.9 204 284-500 3-229 (277)
467 PRK10895 lipopolysaccharide AB 100.0 4.9E-36 1.1E-40 335.1 22.0 202 284-499 3-227 (241)
468 PRK13645 cbiO cobalt transport 100.0 6.3E-36 1.4E-40 342.7 23.3 208 283-500 5-242 (289)
469 PRK10070 glycine betaine trans 100.0 3.8E-36 8.3E-41 353.7 21.9 205 284-499 4-255 (400)
470 COG4555 NatA ABC-type Na+ tran 100.0 1.1E-36 2.4E-41 308.1 14.8 203 284-499 1-223 (245)
471 PRK13648 cbiO cobalt transport 100.0 6.7E-36 1.5E-40 339.0 23.1 206 283-500 6-233 (269)
472 PRK10575 iron-hydroxamate tran 100.0 6.1E-36 1.3E-40 338.6 22.6 203 283-499 10-238 (265)
473 PRK13639 cbiO cobalt transport 100.0 5.2E-36 1.1E-40 340.7 21.8 202 285-499 2-227 (275)
474 TIGR02633 xylG D-xylose ABC tr 100.0 4.1E-36 8.9E-41 370.9 22.8 214 909-1131 2-229 (500)
475 PRK15079 oligopeptide ABC tran 100.0 5.5E-36 1.2E-40 346.8 22.4 207 283-499 7-252 (331)
476 PRK14248 phosphate ABC transpo 100.0 5.6E-36 1.2E-40 339.7 22.0 207 282-499 19-253 (268)
477 COG1137 YhbG ABC-type (unclass 100.0 2.3E-37 5E-42 312.7 9.2 203 284-500 4-230 (243)
478 PRK10247 putative ABC transpor 100.0 5.8E-36 1.3E-40 330.6 21.3 199 283-494 6-223 (225)
479 cd03264 ABC_drug_resistance_li 100.0 4.6E-36 1E-40 328.4 20.3 191 285-491 1-211 (211)
480 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.6E-36 1.4E-40 327.2 21.5 191 285-491 1-211 (211)
481 TIGR03411 urea_trans_UrtD urea 100.0 7.7E-36 1.7E-40 333.8 22.5 200 284-498 2-231 (242)
482 TIGR03410 urea_trans_UrtE urea 100.0 4.3E-36 9.2E-41 333.3 20.2 199 285-496 1-219 (230)
483 TIGR03005 ectoine_ehuA ectoine 100.0 6.1E-36 1.3E-40 336.5 21.7 201 285-499 1-237 (252)
484 PRK14268 phosphate ABC transpo 100.0 5.4E-36 1.2E-40 337.9 21.3 206 283-499 11-243 (258)
485 cd03292 ABC_FtsE_transporter F 100.0 3.7E-36 8E-41 330.1 19.4 190 285-487 1-214 (214)
486 PRK13548 hmuV hemin importer A 100.0 1.3E-35 2.8E-40 334.5 24.1 201 284-498 2-230 (258)
487 PRK11300 livG leucine/isoleuci 100.0 1E-35 2.2E-40 335.5 23.3 202 284-499 5-244 (255)
488 TIGR03415 ABC_choXWV_ATP choli 100.0 6.1E-36 1.3E-40 349.4 22.0 189 300-499 37-255 (382)
489 PRK14274 phosphate ABC transpo 100.0 6.7E-36 1.4E-40 337.5 21.7 206 283-499 11-244 (259)
490 PRK13539 cytochrome c biogenes 100.0 9.1E-36 2E-40 324.7 22.0 193 909-1118 3-200 (207)
491 cd03225 ABC_cobalt_CbiO_domain 100.0 4.2E-36 9.2E-41 328.8 19.4 189 286-486 1-211 (211)
492 PRK10771 thiQ thiamine transpo 100.0 2.2E-35 4.7E-40 327.8 25.3 200 285-500 2-221 (232)
493 PRK14259 phosphate ABC transpo 100.0 1.1E-35 2.4E-40 336.9 23.3 207 282-499 11-254 (269)
494 PRK15134 microcin C ABC transp 100.0 7.4E-36 1.6E-40 370.6 23.9 220 908-1134 5-248 (529)
495 PRK14249 phosphate ABC transpo 100.0 8.1E-36 1.8E-40 335.3 21.9 205 284-499 4-236 (251)
496 PRK14235 phosphate transporter 100.0 1E-35 2.3E-40 336.9 22.7 207 282-499 17-252 (267)
497 PRK14239 phosphate transporter 100.0 8.2E-36 1.8E-40 335.7 21.6 205 284-499 5-237 (252)
498 PRK14245 phosphate ABC transpo 100.0 7.9E-36 1.7E-40 335.2 21.4 206 283-499 2-235 (250)
499 TIGR03522 GldA_ABC_ATP gliding 100.0 5.5E-36 1.2E-40 344.5 20.6 201 284-499 2-222 (301)
500 cd03247 ABCC_cytochrome_bd The 100.0 1.1E-35 2.3E-40 316.3 21.2 167 285-491 1-178 (178)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-188 Score=1778.88 Aligned_cols=1130 Identities=51% Similarity=0.858 Sum_probs=1040.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHH
Q 000774 5 GPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQV 84 (1293)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~ 84 (1293)
.|.|.+|++++.++++.++..++.++|++...+.+.|+|..+...+|+|.++++.......+.|+++|+|++|++++.++
T Consensus 236 ~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~ 315 (1381)
T KOG0054|consen 236 LPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDA 315 (1381)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000774 85 CQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKC 164 (1293)
Q Consensus 85 ~~~l~~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~ 164 (1293)
..++|.+|..|++++++++++|..+|+++++|++++++++|++.++.+++++++++.++.+|+|.+.++|+++||++||+
T Consensus 316 ~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~ 395 (1381)
T KOG0054|consen 316 ACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKL 395 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 000774 165 YAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFT-LLGGDLTPARAFTSLSLFAVLRFPLFM 243 (1293)
Q Consensus 165 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~lt~~~~~~~l~~~~~l~~pl~~ 243 (1293)
|+||+.|.+++++.|++|++..++..++.++..++..++|.++.+++|++|. ..++.+++..+|+++++|+.+..|+..
T Consensus 396 yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~ 475 (1381)
T KOG0054|consen 396 YAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFM 475 (1381)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 678889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCC--CCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcC
Q 000774 244 LPNMITQVVNANVSLKRMEEFLLAEEKILLPNP--PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGG 321 (1293)
Q Consensus 244 l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~--~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~ 321 (1293)
+|..+..+.++.+|++|+.+|+..++....... +..+....++++|.+|+|++.+..+.|+||||+|++|+.+||||+
T Consensus 476 ~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~ 555 (1381)
T KOG0054|consen 476 LPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGP 555 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECC
Confidence 999999999999999999999988776533222 223345579999999999875556799999999999999999999
Q ss_pred CCCcHHHHHHHHhcCCCCCCCCceeecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCc
Q 000774 322 TGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDV 401 (1293)
Q Consensus 322 ~GsGKSTLl~~l~g~~~~~~g~~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~ 401 (1293)
.|||||+||.+|+|++++.+| .+.+++.++||||+||+|++||||||+||.++++++|++++++|+|.+|++.+|.||.
T Consensus 556 vGsGKSSLL~AiLGEm~~~sG-~v~v~gsiaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~ 634 (1381)
T KOG0054|consen 556 VGSGKSSLLSAILGEMPKLSG-SVAVNGSVAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDL 634 (1381)
T ss_pred CCCCHHHHHHHHhcCcccccc-eEEEcCeEEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCc
Confidence 999999999999999999999 7888999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEE
Q 000774 402 TEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIIL 481 (1293)
Q Consensus 402 t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~ 481 (1293)
|+|||+|.+|||||||||+||||+|+|+|||+||||+|++|.++.++|+++|++...++||+|+|||+++++++||+|++
T Consensus 635 TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iiv 714 (1381)
T KOG0054|consen 635 TEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIV 714 (1381)
T ss_pred ceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred EeCCeEEEecChHHHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCC-CCCCCCCCccccccccccccccch
Q 000774 482 VHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAAN-GVDNDLPKEASDTRKTKEGKSVLI 560 (1293)
Q Consensus 482 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 560 (1293)
|+||+|.+.|+|+|+++.+..+.++........... ...+ .......+.... ................+.......
T Consensus 715 l~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1381)
T KOG0054|consen 715 LKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEE--ASEK-DLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLV 791 (1381)
T ss_pred ecCCeEecccCHHHHHhcchhHHHHhhccchhhccc--cccc-cccccccccchhhhhhhhhcccccccccccchhhHHH
Confidence 999999999999999998888888743222111110 0000 000000000000 000000000000011111133455
Q ss_pred hhhhhhcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCC---CCchHHHHHHHHHHHHH
Q 000774 561 KQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKT---HGPLFYNTIYSLLSFGQ 637 (1293)
Q Consensus 561 ~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~l~~~~ 637 (1293)
++++++.|.++|++|++|+++.++++.+++++++.++.+++..+..+|+++|++...... .+...|..+|.++++++
T Consensus 792 ~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~ 871 (1381)
T KOG0054|consen 792 QEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVAS 871 (1381)
T ss_pred HHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHH
Confidence 677889999999999999999788888888888899999999999999999998865433 46778999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 638 VLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFV 717 (1293)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~ 717 (1293)
.++.+++++++...+.++++.+|++++++++|+||.|||++|+|+|+|||++|++.+|..+|..+..++..++.+++.++
T Consensus 872 ~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~ 951 (1381)
T KOG0054|consen 872 SLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILV 951 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHH
Q 000774 718 LIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNI 797 (1293)
Q Consensus 718 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~ 797 (1293)
++.+..|+++++++|+.++++.++.+|.+++|+++|.++.+|+|+++|+.|++.|+.|||||+.+++|.+.+.+..|.+.
T Consensus 952 vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~ 1031 (1381)
T KOG0054|consen 952 VISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENS 1031 (1381)
T ss_pred HhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 798 RYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGS-AENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNA 876 (1293)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 876 (1293)
+..+.....++|+++++++++.++++.++.+++..... .+ ++.+|+.++|+++++..++++++....+|+.++|
T Consensus 1032 ~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~-----~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~S 1106 (1381)
T KOG0054|consen 1032 RAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLIS-----PGLVGLSLSYALQLTGLLQWLVRQSSELENNMVS 1106 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999888876655 33 7899999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHH
Q 000774 877 VERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTL 956 (1293)
Q Consensus 877 ~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l 956 (1293)
+||+.+|.+.|+|.|...+...|++.||..|.|+|+|++.+|+++.|+||+||||+|+|||||||||++|||||||+++|
T Consensus 1107 VERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aL 1186 (1381)
T KOG0054|consen 1107 VERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILAL 1186 (1381)
T ss_pred hhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHH
Confidence 99999999999886655555558899999999999999999999889999999999999999999999999999999999
Q ss_pred hcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcc
Q 000774 957 FRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLD 1036 (1293)
Q Consensus 957 ~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~ 1036 (1293)
+|+.+|.+|+|.|||+||.+++++++|++++++||||.||+||+|.||||+.+++|+++|+||++|+++++++++|.|||
T Consensus 1187 FRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld 1266 (1381)
T KOG0054|consen 1187 FRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLD 1266 (1381)
T ss_pred HHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEE
Q 000774 1037 AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLL 1116 (1293)
Q Consensus 1037 ~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl 1116 (1293)
+.+.|+|.|+|-||||.+||||||+++++||+|||+|+++|++|+..|+++|++.+++||||.|+||++++.+||||+||
T Consensus 1267 ~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVl 1346 (1381)
T KOG0054|consen 1267 SEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVL 1346 (1381)
T ss_pred ceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEeeecChhhhhhcCCChHHHHHH
Q 000774 1117 DSGRVLEYDTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1117 ~~G~i~~~g~~~el~~~~~~~~~~l~~ 1143 (1293)
|+|+|+|+|+|++|++++++.|+++..
T Consensus 1347 d~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1347 DAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred eCCeEeecCChHHHHhCCcchHHHHHH
Confidence 999999999999999998888875554
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.4e-184 Score=1846.48 Aligned_cols=1287 Identities=87% Similarity=1.316 Sum_probs=1126.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH
Q 000774 6 PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC 85 (1293)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~ 85 (1293)
+.+.++.++++++++.++..++..++.+...+++.++|..++..+|+|+++++...+.+.++|+++|++++|+++++.++
T Consensus 336 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~ 415 (1622)
T PLN03130 336 PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQIC 415 (1622)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34667777666666666667777778888889999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 000774 86 QALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCY 165 (1293)
Q Consensus 86 ~~l~~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~ 165 (1293)
..++.+|..|+.+++++++++..++++++++++++++++|+..++.+++++.+++.++..++|.+.++|+++||++||+|
T Consensus 416 ~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~ 495 (1622)
T PLN03130 416 QQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCY 495 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999998888888888899999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000774 166 AWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLP 245 (1293)
Q Consensus 166 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~ 245 (1293)
+||+.+.+++++.|+++.+..++......+..++....+.++.+++|+++.+.++.++++.+|++++++..+..|+..+|
T Consensus 496 ~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~ 575 (1622)
T PLN03130 496 AWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLP 575 (1622)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888877777776666667778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCc
Q 000774 246 NMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 325 (1293)
Q Consensus 246 ~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsG 325 (1293)
..+..+.++.+|++||.++++.++....+.++.......|+++|++|+|++++++++|+|+||+|++|++++||||+|||
T Consensus 576 ~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSG 655 (1622)
T PLN03130 576 NLITQAVNANVSLKRLEELLLAEERVLLPNPPLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEG 655 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcccccccCCcccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCC
Confidence 99999999999999999999866542211111112234699999999997544578999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCceeecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCccccc
Q 000774 326 KTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIG 405 (1293)
Q Consensus 326 KSTLl~~l~g~~~~~~g~~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig 405 (1293)
||||+++|+|+++|++|+.+.+++.|+||+|+||+|++||+|||+||.++++++|+++++.|++.++++.+|+|++|.||
T Consensus 656 KSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IG 735 (1622)
T PLN03130 656 KTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIG 735 (1622)
T ss_pred HHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCccccccc
Confidence 99999999999999993367789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCC
Q 000774 406 ERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEG 485 (1293)
Q Consensus 406 ~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G 485 (1293)
|+|.+|||||||||+||||+|++|||||||||||+||+++++++++.+++...+++|+|+|||+++.++.||+|++|++|
T Consensus 736 e~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G 815 (1622)
T PLN03130 736 ERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEG 815 (1622)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999998887767899999999999999999999999999
Q ss_pred eEEEecChHHHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhh
Q 000774 486 MVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEER 565 (1293)
Q Consensus 486 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1293)
+++++|+|+++++..+.|+.+.......++..+...+. ........+..+......+.........+..+.....++++
T Consensus 816 ~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 894 (1622)
T PLN03130 816 MIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEE-EDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEER 894 (1622)
T ss_pred EEEEeCCHHHHHhcchhHHHHHHhcccccccccccccc-cccccccccccccccccccccccccccccccchhhhhHHHH
Confidence 99999999999998888888876543221111100000 00000000000000000000000000001111223455677
Q ss_pred hcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 000774 566 ETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANS 645 (1293)
Q Consensus 566 ~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 645 (1293)
+.|.+++++|++|+++.++++.+++++++.++.+++....++|+++|.+...........|..+|.+++++..++.+++.
T Consensus 895 ~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~ 974 (1622)
T PLN03130 895 ETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLNS 974 (1622)
T ss_pred hcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999987777777777777888888889999999999886543333455677788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 646 YWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTM 725 (1293)
Q Consensus 646 ~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1293)
++....+.+++.++|.+++++++++|+.||+++++|+++||+++|++.+|..++..+..++..++.+++.++++++++++
T Consensus 975 ~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~ 1054 (1622)
T PLN03130 975 YWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTI 1054 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 726 SLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMG 805 (1293)
Q Consensus 726 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1293)
.+++++|++++++.++.++.+..++.++.....++++++++.|+++|+.+||+|+.++++.+.+.+..+...+..+....
T Consensus 1055 ~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~ 1134 (1622)
T PLN03130 1055 SLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMS 1134 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888877777888888999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 000774 806 ANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIE 885 (1293)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~ 885 (1293)
.++|++.++++++.+++++++.+.+...+.......+.+.+|.+++|+..+..++.++.+....++..+.+++|+.++.+
T Consensus 1135 ~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~ 1214 (1622)
T PLN03130 1135 SNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYID 1214 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999998888777776666555444333344556788999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcc
Q 000774 886 LPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 965 (1293)
Q Consensus 886 ~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G 965 (1293)
.|+|.+...+...+++.||..|.|+|+||+|+|+++.+++|+|+||+|+|||+||||||||||||||+++|+|+++|++|
T Consensus 1215 ~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G 1294 (1622)
T PLN03130 1215 LPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERG 1294 (1622)
T ss_pred CCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCc
Confidence 88776543333344557888899999999999987656799999999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCC
Q 000774 966 RILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1045 (1293)
Q Consensus 966 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~ 1045 (1293)
+|.+||+|+++++++++|++|++|||||.+|+||||+||+++.+++|++++++++.++++++++++|.||||.++++|.+
T Consensus 1295 ~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~n 1374 (1622)
T PLN03130 1295 RILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGEN 1374 (1622)
T ss_pred eEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeec
Q 000774 1046 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1046 LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g 1125 (1293)
|||||||||||||||+++|+|||||||||+||++|++.|+++|++.++++|+|+||||++++.+||||+||++|+|+|.|
T Consensus 1375 LSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~G 1454 (1622)
T PLN03130 1375 FSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFD 1454 (1622)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCChHHHHHHhhccchHHHHHHhhccCcchhhhhhhhhcccccccchhhchhHHHHHHHHHHhhccccchhh
Q 000774 1126 TPEELLSNEGSSFSKMVQSTGAANAQYLRSLVLGGEAENKLREENKQIDGQRRWLASSRWAAAAQYALAVSLTSSHNDLQ 1205 (1293)
Q Consensus 1126 ~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1205 (1293)
+|+||+++.++.|++|++.++..+.+.+.....+.+.+.....+....+.+.++.+..+|+..++++++.++++++++++
T Consensus 1455 t~~eLl~~~~g~f~~L~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1534 (1622)
T PLN03130 1455 TPENLLSNEGSAFSKMVQSTGAANAQYLRSLVFGGDEDRLAREESKALDGQRKWLASSRWAAAAQFALAVSLTSSQNDLQ 1534 (1622)
T ss_pred CHHHHHhCCCCHHHHHHHHcChhhhHHHHHHHhccccccccccchhcccchhhHHHhhhcccchhhhhhhhccccccchh
Confidence 99999987778999999988876666665554222222222333445677888888889999999999999999999999
Q ss_pred hccccchhhHhhhchhhHHHHHHhhccCCchhhHhhhcccccchhhHHHHHHHHHhhhhhhhHhhhhccccCCCCCCCcc
Q 000774 1206 RLEVEDQNNILKKTKDAVVTLQGVLEGKHDKEIEESLNQHEVSTDGWWSALYRMIEGLSVMSRLARNRLHQSDYDLEERS 1285 (1293)
Q Consensus 1206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1285 (1293)
..++++..++++++|+++.++++|.+|+||+.+.+.+.++++++|+||+++|+|+||+++|+|+++||.||++|++++.+
T Consensus 1535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1614 (1622)
T PLN03130 1535 SLEIEDENSILEKTKDAVITLQSVLEGKHDKEIDESLNQRQVPRDGWWSSLYRMVEGLAVMSRLARNRMQQSDHNFEGKS 1614 (1622)
T ss_pred ccccCCchhhhhhhhhhHhHHHHhhccccccccchhhhhccCCcccchHHHHHHHhccccchhHHHHhhccCcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCC
Q 000774 1286 IDWDHVEM 1293 (1293)
Q Consensus 1286 ~~~~~~~~ 1293 (1293)
+|||++||
T Consensus 1615 ~~~~~~~~ 1622 (1622)
T PLN03130 1615 IDWDNVEM 1622 (1622)
T ss_pred CChhhhcC
Confidence 99999997
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.5e-163 Score=1646.60 Aligned_cols=1147 Identities=75% Similarity=1.189 Sum_probs=996.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHH
Q 000774 5 GPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQV 84 (1293)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~ 84 (1293)
.+.+.++.++++++++.++..++.+++.+...+++.+++..++..+|+|.++++...+++.++|+++|++++|+++++++
T Consensus 335 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~ 414 (1495)
T PLN03232 335 DPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQI 414 (1495)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 34466777788888888888888888888889999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000774 85 CQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKC 164 (1293)
Q Consensus 85 ~~~l~~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~ 164 (1293)
+..++.+|..|+.+++++++++..+++.++++++++++++|+..++.+++++..++.++..|++.+.++|.++||++||+
T Consensus 415 ~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~ 494 (1495)
T PLN03232 415 AEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKC 494 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999998888888888888888888888899999999999999999999999999999999999
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 000774 165 YAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFML 244 (1293)
Q Consensus 165 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l 244 (1293)
|+||+.+.+++++.|+++.+..++......+..++....+.++.+++||++.+.++.++++.+|++++++..+..|+..+
T Consensus 495 ~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l 574 (1495)
T PLN03232 495 YAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNML 574 (1495)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888777777666666666677788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCC
Q 000774 245 PNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 324 (1293)
Q Consensus 245 ~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~Gs 324 (1293)
|..+..+.++.+|++||.++++.+++.....+........|+++|++|+|+++.++++|+|+||+|++||+++|+|||||
T Consensus 575 ~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGS 654 (1495)
T PLN03232 575 PNLLSQVVNANVSLQRIEELLLSEERILAQNPPLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGE 654 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccccccccCCcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCC
Confidence 99999999999999999999987654221111111223469999999999854457899999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCCceeecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccc
Q 000774 325 GKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEI 404 (1293)
Q Consensus 325 GKSTLl~~l~g~~~~~~g~~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~i 404 (1293)
|||||+++|+|+++|++|+...+++.|+||+|+||+|++||+|||+||+++++++++++++.|++.++++.+|+||+|.|
T Consensus 655 GKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~I 734 (1495)
T PLN03232 655 GKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEI 734 (1495)
T ss_pred cHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCcee
Confidence 99999999999999999888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeC
Q 000774 405 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 484 (1293)
Q Consensus 405 g~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~ 484 (1293)
||+|.+|||||||||+||||+|++|||||||||||+||+++++++++.+++...+++|+|+|||+++.++.||+|++|++
T Consensus 735 Ge~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~ 814 (1495)
T PLN03232 735 GERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSE 814 (1495)
T ss_pred cCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999888776789999999999999999999999999
Q ss_pred CeEEEecChHHHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhh
Q 000774 485 GMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEE 564 (1293)
Q Consensus 485 G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1293)
|+++++|+|+++.+.++.|++++..+...++..++....+..... .+.. .. +............+..+.....+++
T Consensus 815 G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~e~ 890 (1495)
T PLN03232 815 GMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKL--GPTV-TI-DVSERNLGSTKQGKRGRSVLVKQEE 890 (1495)
T ss_pred CEEEEecCHHHHHhcchhHHHHHHhcccccccccccccccccccc--cccc-cc-cccccccccccccccchhhhhhHHH
Confidence 999999999999998888988876544221110000000000000 0000 00 0000000000000111112345667
Q ss_pred hhcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHH
Q 000774 565 RETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLAN 644 (1293)
Q Consensus 565 ~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 644 (1293)
++.|.+++++|++|+++.++++.+++++++.++.+++.....+|+++|.+...........|..+|.+++++..++.+++
T Consensus 891 ~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~ 970 (1495)
T PLN03232 891 RETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTN 970 (1495)
T ss_pred HhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999998877777777777777888888889999999987543222334578888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 645 SYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVST 724 (1293)
Q Consensus 645 ~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 724 (1293)
.+++...+.+++.++|++++++++++|+.||+++++|+++||+++|++.+|..++..+..++..++.+++.++++++..+
T Consensus 971 ~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~ 1050 (1495)
T PLN03232 971 SFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVST 1050 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888888888888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 725 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNM 804 (1293)
Q Consensus 725 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1293)
+.+++++|++++++..+.++.+..++.++....+++++++++.|+++|+.+||+|+.++++.+.+.+..+...+..+...
T Consensus 1051 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~ 1130 (1495)
T PLN03232 1051 ISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANT 1130 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777778777777777888888889999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000774 805 GANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYI 884 (1293)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~ 884 (1293)
....|+..++..++.+++++++.+.+...+..+....+.+.+|++++|+..+..++.++.+.+..++..+.+++|+.++.
T Consensus 1131 ~~~~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~ 1210 (1495)
T PLN03232 1131 SSNRWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYI 1210 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88899998888777666655555555443433333345667788889999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCc
Q 000774 885 ELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER 964 (1293)
Q Consensus 885 ~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~ 964 (1293)
+.|+|.+...+...+++.||..|.|+|+||+|+|+++.+++|+|+||+|+|||++|||||||||||||+++|+|+++|++
T Consensus 1211 ~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~ 1290 (1495)
T PLN03232 1211 DLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEK 1290 (1495)
T ss_pred cCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCC
Confidence 98877543222223445688888999999999997665679999999999999999999999999999999999999999
Q ss_pred ceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCC
Q 000774 965 GRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE 1044 (1293)
Q Consensus 965 G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~ 1044 (1293)
|+|.+||+|+++++++++|++|+||||+|.+|++|||+||+++++++|++++++++.++++++++++|+|+||.++++|.
T Consensus 1291 G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~ 1370 (1495)
T PLN03232 1291 GRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGE 1370 (1495)
T ss_pred ceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeee
Q 000774 1045 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1045 ~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 1124 (1293)
+|||||||||||||||+++|+|||||||||+||++|++.|++.|++.++++|+|+||||++++.+||||+||++|+|+|.
T Consensus 1371 ~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1450 (1495)
T PLN03232 1371 NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEY 1450 (1495)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred cChhhhhhcCCChHHHHHHhhccchHHHHHH
Q 000774 1125 DTPEELLSNEGSSFSKMVQSTGAANAQYLRS 1155 (1293)
Q Consensus 1125 g~~~el~~~~~~~~~~l~~~~~~~~~~~~~~ 1155 (1293)
|+|+||+++.++.|++|++.++..+.+.++.
T Consensus 1451 Gt~~eLl~~~~~~f~~l~~~~~~~~~~~~~~ 1481 (1495)
T PLN03232 1451 DSPQELLSRDTSAFFRMVHSTGPANAQYLSN 1481 (1495)
T ss_pred CCHHHHHhCCCCHHHHHHHHhChhhhHHHHH
Confidence 9999999887789999998877665554443
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.3e-154 Score=1563.73 Aligned_cols=1132 Identities=41% Similarity=0.710 Sum_probs=975.9
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHH
Q 000774 5 GPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQV 84 (1293)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~ 84 (1293)
.+.+.+|.++++++++.++..++..+|.+...+++.+++..|+..+|+|+++++...+++.++|+++|++++|++++..+
T Consensus 352 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~ 431 (1522)
T TIGR00957 352 APDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDL 431 (1522)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHH
Confidence 34566788888888888888889889998899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000774 85 CQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKC 164 (1293)
Q Consensus 85 ~~~l~~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~ 164 (1293)
...++.+|..|+.++++++++|...|+.++++++++++++|+..++.+++++.+++.++..|+|.+.++|+++||++||+
T Consensus 432 ~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~ 511 (1522)
T TIGR00957 432 ATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKL 511 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000774 165 YAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLL--GGDLTPARAFTSLSLFAVLRFPLF 242 (1293)
Q Consensus 165 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~lt~~~~~~~l~~~~~l~~pl~ 242 (1293)
|+||+.+.+++++.|++|.+..++...+..+..+.....+.++.+++|++|.+. ++.++++.+|++++++..+..|+.
T Consensus 512 ~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~ 591 (1522)
T TIGR00957 512 YAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLN 591 (1522)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888877776666655556666667777777765 357899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccCC--CCCCC-CCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEE
Q 000774 243 MLPNMITQVVNANVSLKRMEEFLLAEEKILLP--NPPLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIV 319 (1293)
Q Consensus 243 ~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~--~~~~~-~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lv 319 (1293)
.++..+..+.++.+|++||.++++.++..... ..... .....|+++|++|+|++ .++++|+|+||+|++||+++|+
T Consensus 592 ~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~l~~isl~i~~G~~v~Iv 670 (1522)
T TIGR00957 592 ILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWAR-DLPPTLNGITFSIPEGALVAVV 670 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCC-CCCceeeeeEEEEcCCCEEEEE
Confidence 99999999999999999999999866542111 01011 11236999999999974 3468999999999999999999
Q ss_pred cCCCCcHHHHHHHHhcCCCCCCCCceeecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCC
Q 000774 320 GGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGG 399 (1293)
Q Consensus 320 G~~GsGKSTLl~~l~g~~~~~~g~~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g 399 (1293)
||||||||||+++|+|+++|++| .+.+.+.|+||||+||+|++||+|||.||.+.++++++++++.|++.++++.+|+|
T Consensus 671 G~~GsGKSTLl~~l~g~~~~~~G-~i~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g 749 (1522)
T TIGR00957 671 GQVGCGKSSLLSALLAEMDKVEG-HVHMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSG 749 (1522)
T ss_pred CCCCCCHHHHHHHHhCCCccCCc-EEEECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCC
Confidence 99999999999999999999998 66778899999999999999999999999888888999999999999999999999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHh--hhcCCcEEEEEecCcchhhhCC
Q 000774 400 DVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIR--GELSGKTRVLVTNQLHFLSQVD 477 (1293)
Q Consensus 400 ~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~--~~~~~~tvi~vtH~~~~l~~~d 477 (1293)
++|.+|++|.+|||||||||+||||+|++|+++|||||||+||+++++++++.+.+ ...+++|+|+|||+++.+..||
T Consensus 750 ~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D 829 (1522)
T TIGR00957 750 DRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVD 829 (1522)
T ss_pred CCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCC
Confidence 99999999999999999999999999999999999999999999999999998874 3456899999999999999999
Q ss_pred eEEEEeCCeEEEecChHHHhhccHHHHHHHHHhchhhhhh--hhc-c---cCccccC---CC--------CCCCCCC---
Q 000774 478 RIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYV--EEK-E---DGETVDN---KT--------SKPAANG--- 537 (1293)
Q Consensus 478 ~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~-~---~~~~~~~---~~--------~~~~~~~--- 537 (1293)
+|++|++|++++.|+++++.+..+.|.++.......+... ++. . ..+.... .. .......
T Consensus 830 ~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1522)
T TIGR00957 830 VIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSA 909 (1522)
T ss_pred EEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 9999999999999999999988888887775432211100 000 0 0000000 00 0000000
Q ss_pred CCCCCCC---c--cc-c-cc-ccccccccchhhhhhhcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 000774 538 VDNDLPK---E--AS-D-TR-KTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWL 609 (1293)
Q Consensus 538 ~~~~~~~---~--~~-~-~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 609 (1293)
....... . .. . .. ..+........+++++.|.+++++|+.|+++.|. +.+++++++.++.+++....++|+
T Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~l 988 (1522)
T TIGR00957 910 SSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGL-FITFLSIFLFVCNHVSALASNYWL 988 (1522)
T ss_pred cccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0 00 0 00 0000111233455667788999999999998764 444445555566777888899999
Q ss_pred hhhccCCCcC--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHH
Q 000774 610 SYWTDQSSLK--THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRF 687 (1293)
Q Consensus 610 ~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rl 687 (1293)
++|.+..... ......+..+|.+++++..++.++..++....+.+++.++|++++++++++|+.||+++++|+++||+
T Consensus 989 ~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~ 1068 (1522)
T TIGR00957 989 SLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRF 1068 (1522)
T ss_pred HHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHH
Confidence 9998754211 12234566688888888888888888999999999999999999999999999999999999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Q 000774 688 AKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFG 767 (1293)
Q Consensus 688 s~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (1293)
++|++.+|..++..+..++..++.+++.++++++.+|+++++++|++++++.+..+|.+..++.++.....++++++++.
T Consensus 1069 s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~ 1148 (1522)
T TIGR00957 1069 SKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFN 1148 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999998888888888888888888888888888889999999999999999999999999
Q ss_pred HHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHH
Q 000774 768 EALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMG 847 (1293)
Q Consensus 768 e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 847 (1293)
|+++|+.+||+|+.++++.+.+.+..+...+..+.....+.|+..++++++.+++++++.+.+...+..+ .+.++
T Consensus 1149 E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~g~l~ 1223 (1522)
T TIGR00957 1149 ETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAVISRHSLS-----AGLVG 1223 (1522)
T ss_pred HHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----HHHHH
Confidence 9999999999999999999999999999999998888899999999998877666555555554444444 67788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCcee
Q 000774 848 LLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLH 927 (1293)
Q Consensus 848 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~ 927 (1293)
+++.|+..+..++..+.+.+..++..+.+++|+.++.+.++|.+...+...+++.||..|.|+|+||+|+|+++.+++|+
T Consensus 1224 ~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~ 1303 (1522)
T TIGR00957 1224 LSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLR 1303 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCccccc
Confidence 99999999999999999999999999999999999998877654222233345568888999999999999866557999
Q ss_pred eeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCC
Q 000774 928 GLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF 1007 (1293)
Q Consensus 928 ~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~ 1007 (1293)
|+||+|+|||++|||||||||||||+++|+|+++|++|+|.+||+|+++++++++|++|++|||||.+|+||||+||+|+
T Consensus 1304 ~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~ 1383 (1522)
T TIGR00957 1304 HINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPF 1383 (1522)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000774 1008 SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKT 1087 (1293)
Q Consensus 1008 ~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~ 1087 (1293)
++++|++++++++.+++++++.++|.||||.++++|.+||||||||+||||||+++|+|||||||||+||++|++.|++.
T Consensus 1384 ~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~ 1463 (1522)
T TIGR00957 1384 SQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST 1463 (1522)
T ss_pred cCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHhh
Q 000774 1088 IREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 1145 (1293)
Q Consensus 1088 l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~~ 1145 (1293)
|++.++++|+|+||||++++.+||||+||++|+|+|.|+|+||+++ ++.|+++++..
T Consensus 1464 l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1464 IRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred HHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999986 57899888763
No 5
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=8.9e-151 Score=1520.68 Aligned_cols=1132 Identities=34% Similarity=0.592 Sum_probs=960.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhc--CCChhHHHHHHHHHHHHHHHHHH
Q 000774 9 IGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARK--NFASGKITNLMTTDAEQLQQVCQ 86 (1293)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~--~~~~G~l~~~l~~Dv~~l~~~~~ 86 (1293)
.++.++++++++.++..++.+++.+...+.+.++|..|...+|+|+++++..... +.++|+++|++++|++++..++.
T Consensus 283 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~ 362 (1560)
T PTZ00243 283 RGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQ 362 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHH
Confidence 4667777788888899999999999999999999999999999999999887665 56899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 000774 87 ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYA 166 (1293)
Q Consensus 87 ~l~~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~ 166 (1293)
.++.+|..|+.++++++++|..+|++++++++++++++|+..++.+++.+.+++.++..|+|.+.++|+++||++||+|+
T Consensus 363 ~~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~ 442 (1560)
T PTZ00243 363 YCMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMA 442 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 167 WENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPN 246 (1293)
Q Consensus 167 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~ 246 (1293)
||+.+.+++++.|++|++..++......+..++..+.+.++.+++|++|.+.++.++++.+|+++++++.+..|+..+|.
T Consensus 443 wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~ 522 (1560)
T PTZ00243 443 WEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPW 522 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888888888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccc-------C---------C--C--------------C---C--------------
Q 000774 247 MITQVVNANVSLKRMEEFLLAEEKIL-------L---------P--N--------------P---P-------------- 277 (1293)
Q Consensus 247 ~~~~~~~~~~s~~Ri~~~l~~~~~~~-------~---------~--~--------------~---~-------------- 277 (1293)
.+..+.++.+|++||.+||+.++... . . . + +
T Consensus 523 ~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1560)
T PTZ00243 523 VFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRAL 602 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccch
Confidence 99999999999999999997654110 0 0 0 0 0
Q ss_pred -----------CCCCCCcEEEEeeEEEcCCC-------------------------------------CCCCceeceeEE
Q 000774 278 -----------LTSGLPAISIRNGYFSWDSK-------------------------------------AERPTLLNINLD 309 (1293)
Q Consensus 278 -----------~~~~~~~i~~~~~~~~y~~~-------------------------------------~~~~~l~~isl~ 309 (1293)
.....+.+.++|++|.++.. .++++|+|+||+
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~ 682 (1560)
T PTZ00243 603 RMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVS 682 (1560)
T ss_pred hhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEE
Confidence 00011246677777764310 135689999999
Q ss_pred ecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCC
Q 000774 310 IPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSL 389 (1293)
Q Consensus 310 i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l 389 (1293)
|++|++++|+||||||||||+++|+|+++|++| .+.+++.||||||+||+|++||+|||.|+.+.+.+++.++++.|++
T Consensus 683 i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G-~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l 761 (1560)
T PTZ00243 683 VPRGKLTVVLGATGSGKSTLLQSLLSQFEISEG-RVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQL 761 (1560)
T ss_pred ECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCc-EEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999 5567789999999999999999999999987777789999999999
Q ss_pred hhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecC
Q 000774 390 QHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQ 469 (1293)
Q Consensus 390 ~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~ 469 (1293)
.++++.+|+|++|.+|++|.+|||||||||+|||||+.+|++||||||||+||+++.+++++.++....+|+|+|+|||+
T Consensus 762 ~~~l~~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~ 841 (1560)
T PTZ00243 762 EADLAQLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQ 841 (1560)
T ss_pred HHHHHHhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999998776555578999999999
Q ss_pred cchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHHHHhchhhhhhhhcccCc--cccCCCCCCCC-CCC-CCCCCCc
Q 000774 470 LHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGE--TVDNKTSKPAA-NGV-DNDLPKE 545 (1293)
Q Consensus 470 ~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~-~~~~~~~ 545 (1293)
++.++.||+|++|++|++++.|+++++.+.+ .|..+........+..+.....+ ........... ... .......
T Consensus 842 ~~~~~~ad~ii~l~~G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1560)
T PTZ00243 842 VHVVPRADYVVALGDGRVEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNA 920 (1560)
T ss_pred HHHHHhCCEEEEEECCEEEEecCHHHHHhCh-HHHHHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999998754 46655543211110000000000 00000000000 000 0000000
Q ss_pred cccc-cccccccccchhhhhhhcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCch
Q 000774 546 ASDT-RKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL 624 (1293)
Q Consensus 546 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 624 (1293)
.... .........+...+++..|.++|++|++|++..|++..++++++++++.+++....++|+++|.+.... ....
T Consensus 921 ~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~--~~~~ 998 (1560)
T PTZ00243 921 EGGDGAALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFK--LSAA 998 (1560)
T ss_pred ccccccccccccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--CCcc
Confidence 0000 000011122344556677889999999999988877766666677777888888899999999864321 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHH
Q 000774 625 FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNM 704 (1293)
Q Consensus 625 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~ 704 (1293)
.|..+|.++.++..++.+++.+.......+.++++|++++++++++|+.||+++++|+++||+++|++.+|..++..+..
T Consensus 999 ~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~ 1078 (1560)
T PTZ00243 999 TYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLY 1078 (1560)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHH
Confidence 56677777777777777777777777788889999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHH
Q 000774 705 FMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDR 784 (1293)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~ 784 (1293)
++..++.+++.++++++..|+++++++|++++++.+..+|.+..++.++.....++++++++.|++.|+.+||+|+.++.
T Consensus 1079 ~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~ 1158 (1560)
T PTZ00243 1079 LLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHL 1158 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHH
Confidence 88888888888888888888877777777777777788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCcccchhhhHHHHHHHHHHHHHHHHHH
Q 000774 785 MADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVV----QNGSAENQEAFASTMGLLLSYALNITSLL 860 (1293)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 860 (1293)
+.+++.+..+...+..+.....+.|+..+.+++..+++.+++.+.+. ..+..+ .+.+++++.++..+..++
T Consensus 1159 ~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~l~~~l~~a~~l~~~l 1233 (1560)
T PTZ00243 1159 VMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQE-----IGLVSLSLTMAMQTTATL 1233 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888899999999888876654443333321 112222 567888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcC-CCCCcccc-----------------------CCCCCC---CCCCCCccEEEEE
Q 000774 861 TAVLRLASLAENSLNAVERVGNYIEL-PSEAPLVI-----------------------ESNRPP---PGWPSSGSIKFED 913 (1293)
Q Consensus 861 ~~~~~~~~~~~~~~~a~~Rl~~~~~~-~~e~~~~~-----------------------~~~~~~---~~~~~~g~i~~~~ 913 (1293)
..+.+.+..++..+.+++|+.++.+. |+|+.... +...++ +.|+..|.|+|+|
T Consensus 1234 ~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~n 1313 (1560)
T PTZ00243 1234 NWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEG 1313 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEE
Confidence 99999999999999999999999863 33321000 001111 1234567899999
Q ss_pred EEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEcccc
Q 000774 914 VVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSP 993 (1293)
Q Consensus 914 v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~ 993 (1293)
|+|+|+++.+++|+||||+|+|||+||||||||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||+|
T Consensus 1314 Vsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp 1393 (1560)
T PTZ00243 1314 VQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDP 1393 (1560)
T ss_pred EEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCC
Confidence 99999876567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC-CCEEEEeCC
Q 000774 994 VLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR-SKILVLDEA 1072 (1293)
Q Consensus 994 ~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~-p~iLlLDEp 1072 (1293)
.||++|||+||+++.+.+|+++++|++.+++++++.++|.||||.++++|.+|||||||||||||||+++ |+|||||||
T Consensus 1394 ~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEA 1473 (1560)
T PTZ00243 1394 VLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEA 1473 (1560)
T ss_pred ccccccHHHHhCcccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 9999999999999888899999999999999999999999999999999999999999999999999995 899999999
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHhhccch
Q 000774 1073 TAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGAAN 1149 (1293)
Q Consensus 1073 Ts~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~~~~~~ 1149 (1293)
||+||++|++.|++.|++.++++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++.++.|+++++..+..+
T Consensus 1474 TSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~~ 1550 (1560)
T PTZ00243 1474 TANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRSE 1550 (1560)
T ss_pred CccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChhH
Confidence 99999999999999999998999999999999999999999999999999999999999877889999998765433
No 6
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.6e-149 Score=1504.64 Aligned_cols=1128 Identities=29% Similarity=0.523 Sum_probs=957.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHHH
Q 000774 8 WIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQA 87 (1293)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~~ 87 (1293)
+.++.++++++++.++..++.+++.|...+.+.++|..+...+|+|+++++...+++.++|+++|++++|++++..++..
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~ 198 (1490)
T TIGR01271 119 EIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLAL 198 (1490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHH
Confidence 56778888888888888899999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcc
Q 000774 88 LHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAW 167 (1293)
Q Consensus 88 l~~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~ 167 (1293)
++.+|..|+.++++++++|..+|++++++++++++++|+..++.+++.+.+++.++..|+|.+.++|+++||++||+|+|
T Consensus 199 ~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~ 278 (1490)
T TIGR01271 199 AHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCW 278 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HHHH
Q 000774 168 ENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLF-MLPN 246 (1293)
Q Consensus 168 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~-~l~~ 246 (1293)
|+.+.+++++.|++|++..++...+..+...+..+.+.++.+++|++|.+.++ ++++.+|++++++..+..|+. .+|.
T Consensus 279 E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~ 357 (1490)
T TIGR01271 279 EEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPG 357 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888877776666667777777888888877654 789999999999999999985 7999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCC-----------------------------
Q 000774 247 MITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSK----------------------------- 297 (1293)
Q Consensus 247 ~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~----------------------------- 297 (1293)
.+..+.++.+|++||.+|+..++....... .....++++|++|.|+..
T Consensus 358 ~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~---~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1490)
T TIGR01271 358 AIQTWYDSLGAITKIQDFLCKEEYKTLEYN---LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNF 434 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccc---CCCCceEEecceEecCCcccccccccccccccccccccccccccccc
Confidence 999999999999999999987654311111 112359999999999531
Q ss_pred --CCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeecCcEEEEcCCccccCccHHHHHccCCCC
Q 000774 298 --AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAF 375 (1293)
Q Consensus 298 --~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~ 375 (1293)
..+++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+.+.|+||+|+||+|++||+|||.||.++
T Consensus 435 s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G-~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~ 513 (1490)
T TIGR01271 435 SLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEG-KIKHSGRISFSPQTSWIMPGTIKDNIIFGLSY 513 (1490)
T ss_pred ccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-eEEECCEEEEEeCCCccCCccHHHHHHhcccc
Confidence 024689999999999999999999999999999999999999999 66688899999999999999999999999888
Q ss_pred CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHh
Q 000774 376 EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIR 455 (1293)
Q Consensus 376 ~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~ 455 (1293)
+++++.++++.|++.++++.+|+|+.|.+|++|.+|||||||||+||||+|++|++||||||||+||+++++++++.++.
T Consensus 514 ~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~ 593 (1490)
T TIGR01271 514 DEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLC 593 (1490)
T ss_pred chHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred hhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHHHHhchhhh-------------------h
Q 000774 456 GELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEE-------------------Y 516 (1293)
Q Consensus 456 ~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~-------------------~ 516 (1293)
...+++|+|+|||+++.+..||+|++|++|++++.|+++++.+..+.|...........+ .
T Consensus 594 ~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1490)
T TIGR01271 594 KLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSID 673 (1490)
T ss_pred HHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhcChHHHHHHhccccccccccccccccccccccccccc
Confidence 666799999999999999999999999999999999999998876666555531100000 0
Q ss_pred --------hhhc-c-----cCcccc--------C-----------------------C--CCCCCCCC---------CCC
Q 000774 517 --------VEEK-E-----DGETVD--------N-----------------------K--TSKPAANG---------VDN 540 (1293)
Q Consensus 517 --------~~~~-~-----~~~~~~--------~-----------------------~--~~~~~~~~---------~~~ 540 (1293)
.++. . ..+... + . ...+.... ...
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1490)
T TIGR01271 674 GDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEE 753 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhccccccccccccccccccc
Confidence 0000 0 000000 0 0 00000000 000
Q ss_pred CCCC-----------------------cc--------c---c--------c------------cc-ccc----------c
Q 000774 541 DLPK-----------------------EA--------S---D--------T------------RK-TKE----------G 555 (1293)
Q Consensus 541 ~~~~-----------------------~~--------~---~--------~------------~~-~~~----------~ 555 (1293)
..+. .. . . . +. ... .
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1490)
T TIGR01271 754 SLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINE 833 (1490)
T ss_pred ccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 0000 00 0 0 0 00 000 0
Q ss_pred ---cccchhhhhhhcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC-------Cc-C-----
Q 000774 556 ---KSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQS-------SL-K----- 619 (1293)
Q Consensus 556 ---~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~-------~~-~----- 619 (1293)
......++++..|.++|++|++|++..|+++.+++++++.++.+++.....+|+..|.... .. .
T Consensus 834 ~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~ 913 (1490)
T TIGR01271 834 EDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDV 913 (1490)
T ss_pred hhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccc
Confidence 0012234556678899999999999877666666666677778888999999999886421 00 0
Q ss_pred ------CCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchh
Q 000774 620 ------THGPLFY-NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLG 692 (1293)
Q Consensus 620 ------~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~ 692 (1293)
.....+| .++|..+.++..++.+++.+++...+.+++.++|.+++++++++|+.||+++++|+++||+++|++
T Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~ 993 (1490)
T TIGR01271 914 QKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMA 993 (1490)
T ss_pred cccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHH
Confidence 0011122 344555555566777888999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHcc
Q 000774 693 DIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNG 772 (1293)
Q Consensus 693 ~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 772 (1293)
.+|..++..+..++..++.+++.++++++.+|+++++++|++++++.+..+|.+..++.++.....++|+++++.|+++|
T Consensus 994 ~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~G 1073 (1490)
T TIGR01271 994 IIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKG 1073 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcC
Confidence 99999999999999999999999999999999888888888888888888898899999999999999999999999999
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHH
Q 000774 773 LSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSY 852 (1293)
Q Consensus 773 ~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 852 (1293)
+.+||+|+.++++.+++.+..+...+..+......+|+..++.+++.+++..++.+.+.. ...+ .+.+|.++++
T Consensus 1074 l~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-~~~~-----~g~~g~~l~~ 1147 (1490)
T TIGR01271 1074 LWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-NQDG-----EGEVGIILTL 1147 (1490)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCC-----ccHHHHHHHH
Confidence 999999999999999999999988888888888889999988887655444333332221 1122 3457888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccC--------------CCCCCCCCCCCccEEEEEEEEEe
Q 000774 853 ALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIE--------------SNRPPPGWPSSGSIKFEDVVLRY 918 (1293)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~--------------~~~~~~~~~~~g~i~~~~v~~~y 918 (1293)
+..+...+.++.+.+..++..+.+++|+.++.+.|+|.+...+ ...+++.||..|.|+|+||+|+|
T Consensus 1148 ~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y 1227 (1490)
T TIGR01271 1148 AMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKY 1227 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEe
Confidence 8888889999999999999999999999999988776432111 11234468888999999999999
Q ss_pred cCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccc
Q 000774 919 RPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSG 998 (1293)
Q Consensus 919 ~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ 998 (1293)
+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++ ++|+|.+||+|+++++++++|++|+||||+|.+|+|
T Consensus 1228 ~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~G 1306 (1490)
T TIGR01271 1228 TEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSG 1306 (1490)
T ss_pred CCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCcc
Confidence 8766789999999999999999999999999999999999997 799999999999999999999999999999999999
Q ss_pred cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000774 999 TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDV 1078 (1293)
Q Consensus 999 ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~ 1078 (1293)
|||+||+++.+.+|++++++++.+++++++.++|.|||+.+++.|.+|||||||||||||||+++|+|||||||||+||+
T Consensus 1307 TIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~ 1386 (1490)
T TIGR01271 1307 TFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDP 1386 (1490)
T ss_pred CHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCH
Confidence 99999999888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHhhccc
Q 000774 1079 RTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGAA 1148 (1293)
Q Consensus 1079 ~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~~~~~ 1148 (1293)
+|++.|++.|++.++++|||+||||++++.+||||+||++|+|+|.|+|++|++ .++.|+++++..+..
T Consensus 1387 ~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1387 VTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLN-ETSLFKQAMSAADRL 1455 (1490)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHc-CCcHHHHHHHHhChh
Confidence 999999999999999999999999999999999999999999999999999996 478899999876544
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.5e-147 Score=1366.08 Aligned_cols=1094 Identities=22% Similarity=0.296 Sum_probs=853.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000774 37 RVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVASLL 115 (1293)
Q Consensus 37 ~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~~~~l~~~~~~~~l~ 115 (1293)
+.+.|.-..+|...++.+++.+..+++...+|++.+++++|++.+++.+ ..+..++.....++.++++.|+..|.++++
T Consensus 97 ~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~W~Ltlv 176 (1228)
T KOG0055|consen 97 RTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYGWKLTLV 176 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555566666677788889999999999999999999999999976 455566666667777888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 116 GALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAAC 195 (1293)
Q Consensus 116 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1293)
++.+.|++......+.+.+.+...+.++...+..+...|.+.++|||.+|+.|+...+++.+.-+...+...+......+
T Consensus 177 ~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g~~~G~ 256 (1228)
T KOG0055|consen 177 MLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKGLFKGL 256 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888899899999999999999999999999999999999999999999999888888877777766666
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccC
Q 000774 196 NSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILL 273 (1293)
Q Consensus 196 ~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~ 273 (1293)
...+..++. .....+|||..++..+..++|.+++.+..+......+.+....+..+..+++|+.+|.+.++..+....
T Consensus 257 ~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~ 336 (1228)
T KOG0055|consen 257 GLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDP 336 (1228)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCCc
Confidence 655544433 335567888888888889999998887666666667888889999999999999999999987665422
Q ss_pred CC--C-CCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCce-----
Q 000774 274 PN--P-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASA----- 345 (1293)
Q Consensus 274 ~~--~-~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~----- 345 (1293)
.. . ........|+|+||+|+||.+++.++|+|+||+|++|+.+||||||||||||++++|.|+|+|++|.+.
T Consensus 337 ~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~d 416 (1228)
T KOG0055|consen 337 YSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGED 416 (1228)
T ss_pred ccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCcc
Confidence 21 1 122234579999999999988888999999999999999999999999999999999999999998432
Q ss_pred -------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 346 -------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 346 -------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
.+|++||.|+|+|.||++||+|||.+|++ .+.+++.++++.++.++++..+|+|++|.+||+|.+|||||||
T Consensus 417 i~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQ 496 (1228)
T KOG0055|consen 417 IRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQ 496 (1228)
T ss_pred chhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHH
Confidence 24668999999999999999999999985 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHh
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
||||||||++||+|||||||||+||+++++.+.+ +++...+|+|.|+||||++++++||+|++|++|+|++.|+|+||+
T Consensus 497 RIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~-ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi 575 (1228)
T KOG0055|consen 497 RIAIARALVRNPKILLLDEATSALDAESERVVQE-ALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELI 575 (1228)
T ss_pred HHHHHHHHHhCCCEEEecCcccccCHHHHHHHHH-HHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999998877754 677788999999999999999999999999999999999999999
Q ss_pred hccHHHHHHHHHhchhhhhhhhcccCccc---cCCC-CCCCCCCCCC-CCCCccccccccccccccchhhhhhhcCcccH
Q 000774 498 NNGELFQKLMENAGKMEEYVEEKEDGETV---DNKT-SKPAANGVDN-DLPKEASDTRKTKEGKSVLIKQEERETGVVSF 572 (1293)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 572 (1293)
+.+|.|.++++.+........+..+.+.. ..+. .+........ .............+........ +....++
T Consensus 576 ~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~~~s~ 652 (1228)
T KOG0055|consen 576 ALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSE---EDEKVSF 652 (1228)
T ss_pred hccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccccccccccccccccc---ccccccH
Confidence 99999999998774333211100000000 0000 0000000000 0000000000000000000000 0123444
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCc-----CCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 573 KVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSL-----KTHGPLFYNTIYSLLSFGQVLVTLANSYW 647 (1293)
Q Consensus 573 ~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 647 (1293)
..+.++.++ -|+++++..++.++.........+.++........ .......|..+|..+++...++.+++.++
T Consensus 653 ~~i~k~~~p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~ 730 (1228)
T KOG0055|consen 653 WRIFKLNKP--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYF 730 (1228)
T ss_pred HHHHHhccc--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444433 35555555665555544444433333322211111 11122348889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccccc--ccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 648 LIISSLYAAKRLHDAMLHSILRAPMVFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTM 725 (1293)
Q Consensus 648 ~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~--~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1293)
+.+.+.+...++|..+|++++++++.|||. |. |.+.+|+.+|...++..+...+..++..+..++..+++.++.+|.
T Consensus 731 f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~ 809 (1228)
T KOG0055|consen 731 FGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWR 809 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999995 66 999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 726 SLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMG 805 (1293)
Q Consensus 726 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1293)
+.++.+.+.++++.....+.+.....................|++.+++||++|+.|+++.+.+.+..+...+.......
T Consensus 810 lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~ 889 (1228)
T KOG0055|consen 810 LALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGL 889 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87665444444333333333222222222333333445677899999999999999999999999998887777665544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000774 806 ANRWLAIRLEIVGGLMIWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNY 883 (1293)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~ 883 (1293)
.........+.+..++..+..++. ++..+..+....+-..+.+. +. ...+.......+.+..+..|+.++.++
T Consensus 890 i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~--~t---a~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 890 ISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALS--FT---AMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHH--HH---HHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 333222222222222222222221 23344444322222222111 11 123344455566677888899999999
Q ss_pred hcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCC-CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC
Q 000774 884 IELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL 962 (1293)
Q Consensus 884 ~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~-~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p 962 (1293)
++.++..+...+. .....+..|+|+++||+|+||.++ .++|+|+||+|++|+.+||||||||||||++.+|.|+|+|
T Consensus 965 ~dr~~~i~~~~~~--~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp 1042 (1228)
T KOG0055|consen 965 LDRKPTIDPDSTS--GGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDP 1042 (1228)
T ss_pred hcCCCCCCCCCCC--CCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 9876532211111 111224578999999999997432 3689999999999999999999999999999999999999
Q ss_pred CcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhc
Q 000774 963 ERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSE 1041 (1293)
Q Consensus 963 ~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~ 1041 (1293)
++|.|.|||.|+++++++++|++||+|.|+|.||++||||||.++. +.+++|+.+|++.+++++||..||+||||.+++
T Consensus 1043 ~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGe 1122 (1228)
T KOG0055|consen 1043 DAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGE 1122 (1228)
T ss_pred CCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCc
Confidence 9999999999999999999999999999999999999999999773 468999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeE
Q 000774 1042 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1042 ~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i 1121 (1293)
+|.+||||||||+|||||++|||+||||||+||+||.++++.++++|++...++|+|+|+||++++++||.|+|+++|+|
T Consensus 1123 rG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~V 1202 (1228)
T KOG0055|consen 1123 RGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKV 1202 (1228)
T ss_pred ccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecChhhhhhcCCChHHHHHHhh
Q 000774 1122 LEYDTPEELLSNEGSSFSKMVQST 1145 (1293)
Q Consensus 1122 ~~~g~~~el~~~~~~~~~~l~~~~ 1145 (1293)
+|.|+|++|++ .++.|.+|++.+
T Consensus 1203 vE~GtH~~L~~-~~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1203 VEQGTHDELLA-KRGIYFRLVQLQ 1225 (1228)
T ss_pred EecccHHHHHh-CCCchHHHhhhc
Confidence 99999999998 578899998764
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.5e-133 Score=1342.32 Aligned_cols=1121 Identities=18% Similarity=0.249 Sum_probs=843.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000774 17 IFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAP 95 (1293)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~ 95 (1293)
++++.++..++.+...+...+++.++...+|..+|+++++++..+++..++|++.+++++|++.++..+ ..+..++..+
T Consensus 103 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~ 182 (1466)
T PTZ00265 103 LVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYA 182 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455566666777788999999999999999999999999999999999999999999999865 5677777888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHH
Q 000774 96 FRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKV 175 (1293)
Q Consensus 96 ~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~ 175 (1293)
+.++++++++++..|.++++.++++++++.+..++.+++++..++..+..++..+.+.|.++|+++||+|+.|+.+.+++
T Consensus 183 ~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f 262 (1466)
T PTZ00265 183 SAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKF 262 (1466)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHH
Confidence 88888889999999999999999888888888888888888888888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHHH
Q 000774 176 QNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGG--------DLTPARAFTSLSLFAVLRFPLFMLP 245 (1293)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~--------~lt~~~~~~~l~~~~~l~~pl~~l~ 245 (1293)
.+..+...+...+.....++...+..++.. .+.++++|++++..| .++++.+++++........++..+.
T Consensus 263 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~ 342 (1466)
T PTZ00265 263 NLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIIL 342 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 887777777666666655554444433322 345567788887764 5788888877655544455666677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccCCCC-CCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCC
Q 000774 246 NMITQVVNANVSLKRMEEFLLAEEKILLPNP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 324 (1293)
Q Consensus 246 ~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~-~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~Gs 324 (1293)
..+..++.+.+|++||.++++.+++...... ...+....|+++||+|+|+.+.++++|+|+||+|++||++||||||||
T Consensus 343 ~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGs 422 (1466)
T PTZ00265 343 PNITEYMKSLEATNSLYEIINRKPLVENNDDGKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGC 422 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCC
Confidence 7888999999999999999987654221111 111112369999999999854345799999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCCcee-------------ecCcEEEEcCCccccCccHHHHHccCCC-----------------
Q 000774 325 GKTSLISAMLGELPPVSDASAV-------------IRGTVAYVPQVSWIFNATVRDNILFGSA----------------- 374 (1293)
Q Consensus 325 GKSTLl~~l~g~~~~~~g~~~~-------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~----------------- 374 (1293)
|||||+++|+|+++|++|.... +|+.||||+|+|.+|++||+|||.+|..
T Consensus 423 GKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~ 502 (1466)
T PTZ00265 423 GKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGN 502 (1466)
T ss_pred CHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccc
Confidence 9999999999999999985322 2346999999999999999999998731
Q ss_pred -----------------------------------------CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCCh
Q 000774 375 -----------------------------------------FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 413 (1293)
Q Consensus 375 -----------------------------------------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 413 (1293)
.+++++.++++.+++++++..+|+|++|.+|++|.+|||
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSG 582 (1466)
T PTZ00265 503 DSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSG 582 (1466)
T ss_pred cccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCH
Confidence 234678889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCC-------
Q 000774 414 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEG------- 485 (1293)
Q Consensus 414 GqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G------- 485 (1293)
||||||+|||||+++|+|||||||||+||+++++.+.+.+.+... +|+|+|+||||+++++.||+|++|++|
T Consensus 583 GQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~ 662 (1466)
T PTZ00265 583 GQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVD 662 (1466)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccc
Confidence 999999999999999999999999999999999999876654432 589999999999999999999999986
Q ss_pred ----------------------------------------eEEEecChHHHhh-ccHHHHHHHHHhchhhhhhh-hcccC
Q 000774 486 ----------------------------------------MVKEEGTFEDLSN-NGELFQKLMENAGKMEEYVE-EKEDG 523 (1293)
Q Consensus 486 ----------------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~-~~~~~ 523 (1293)
+|+++|+|+||++ ..+.|..++..+........ ...+.
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~ 742 (1466)
T PTZ00265 663 VDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDK 742 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccc
Confidence 5999999999998 58999999876543221110 00000
Q ss_pred cc--ccCC-CCCC-CC--CCCCCCC-CCc-----cccc-c--cc-cc--c--cccchhhh-hh-hcCcccHHHHHHHHHH
Q 000774 524 ET--VDNK-TSKP-AA--NGVDNDL-PKE-----ASDT-R--KT-KE--G--KSVLIKQE-ER-ETGVVSFKVLSRYKDA 581 (1293)
Q Consensus 524 ~~--~~~~-~~~~-~~--~~~~~~~-~~~-----~~~~-~--~~-~~--~--~~~~~~~~-~~-~~g~~~~~~~~~y~~~ 581 (1293)
.. .... .... .. ....... ... .... . .. .+ . +.....+. .+ ......+..+++++..
T Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (1466)
T PTZ00265 743 DSDMKSSAYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFS 822 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHH
Confidence 00 0000 0000 00 0000000 000 0000 0 00 00 0 00000000 00 0000112222333322
Q ss_pred hchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcC---CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 582 LGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLK---THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKR 658 (1293)
Q Consensus 582 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (1293)
. .+.+++.+++.++..++....++.++.+++..... ......+..++++++++..++.++..++....+.+...+
T Consensus 823 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~ 900 (1466)
T PTZ00265 823 Y--KKDVTIIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKT 900 (1466)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12244445555566666666677776665532211 011224566667777888888999999999999999999
Q ss_pred HHHHHHHHHHcCCcccccc--ccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 659 LHDAMLHSILRAPMVFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 736 (1293)
Q Consensus 659 l~~~~~~~ll~~p~~ff~~--~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 736 (1293)
+|.++|++++++|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+.++++|++++
T Consensus 901 lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~ 980 (1466)
T PTZ00265 901 MKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFI 980 (1466)
T ss_pred HHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986 88999999999999999999888888888888888888888888888877766554433
Q ss_pred HHHHHHHHHHH--HHHHHHH-------------HHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 000774 737 FYAAYLYYQST--AREVKRL-------------DSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTL 801 (1293)
Q Consensus 737 ~~~~~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~ 801 (1293)
+...+....+. .++.++. ..+..+.....+.|+++|+++||+|+.++++.+++.+..+...+...
T Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~ 1060 (1466)
T PTZ00265 981 FMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQK 1060 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 32222111111 1111111 11223445778899999999999999999999999988887766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 802 VNMGANRWLAIRLEIVGGLMIWLTATF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVER 879 (1293)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R 879 (1293)
.......+.....+++..+...++.++ ..+..+..+. +.+..++.+......++..+......++....+.+|
T Consensus 1061 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~-----g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~r 1135 (1466)
T PTZ00265 1061 RKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILV-----DDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEK 1135 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544433333333333322222221111 1223444442 221111112222223345566777888899999999
Q ss_pred HhhhhcCCCCCccccCCCCCC-CCCCCCccEEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHh
Q 000774 880 VGNYIELPSEAPLVIESNRPP-PGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLF 957 (1293)
Q Consensus 880 l~~~~~~~~e~~~~~~~~~~~-~~~~~~g~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~ 957 (1293)
+.++++.+++.+......... ...+..+.|+|+||+|+|+++ ..++|+|+||+|+||+++|||||||||||||+++|+
T Consensus 1136 i~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~ 1215 (1466)
T PTZ00265 1136 YYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLM 1215 (1466)
T ss_pred HHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHH
Confidence 999998654321111111100 011234679999999999743 237999999999999999999999999999999999
Q ss_pred cCCCC------------------------------------------------------CcceEEECCeecCCCChHHHh
Q 000774 958 RIVEL------------------------------------------------------ERGRILIDGFDIAKFGLMDLR 983 (1293)
Q Consensus 958 g~~~p------------------------------------------------------~~G~I~i~g~~i~~~~~~~~r 983 (1293)
|+|+| ++|+|++||+|+++++..++|
T Consensus 1216 r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR 1295 (1466)
T PTZ00265 1216 RFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLR 1295 (1466)
T ss_pred HhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHH
Confidence 99999 699999999999999999999
Q ss_pred hhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 984 KILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
++||||||+|.||++||||||.++. +.+++++++|++.+++++||.++|+||||.++++|.+|||||||||||||||++
T Consensus 1296 ~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr 1375 (1466)
T PTZ00265 1296 NLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLR 1375 (1466)
T ss_pred hhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999874 478999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhccCEEEEEeC----CeEe-eecChhhhhhcCC
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDS----GRVL-EYDTPEELLSNEG 1135 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~----G~i~-~~g~~~el~~~~~ 1135 (1293)
+|+|||||||||+||+++++.|+++|++.. +++|+|+||||+++++.||+|+||++ |+++ |.|+|+||+++.+
T Consensus 1376 ~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~ 1455 (1466)
T PTZ00265 1376 EPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQD 1455 (1466)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCC
Confidence 999999999999999999999999999974 68999999999999999999999999 9955 8999999997557
Q ss_pred ChHHHHHHh
Q 000774 1136 SSFSKMVQS 1144 (1293)
Q Consensus 1136 ~~~~~l~~~ 1144 (1293)
+.|+++++.
T Consensus 1456 g~Y~~l~~~ 1464 (1466)
T PTZ00265 1456 GVYKKYVKL 1464 (1466)
T ss_pred ChHHHHHhh
Confidence 889988764
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.4e-83 Score=754.94 Aligned_cols=552 Identities=26% Similarity=0.371 Sum_probs=475.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCc-CCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 585 LWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSL-KTHGP--LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 661 (1293)
Q Consensus 585 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 661 (1293)
|+.+...++++++.....+..|.+++..+|.... ..... .....++.++.++..+++.++.+++...+.++..++|.
T Consensus 146 ~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~ 225 (716)
T KOG0058|consen 146 WKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERVVARLRT 225 (716)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666667777777788888888777665443 11111 12344566677888999999999999999999999999
Q ss_pred HHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 662 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAY 741 (1293)
Q Consensus 662 ~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 741 (1293)
.+|++++++.+.|||.+.+|++++|++.|...+.+.++..++..+.+..+.++.+.++++.+|.+..+.+..++++..+.
T Consensus 226 ~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~ 305 (716)
T KOG0058|consen 226 DLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVA 305 (716)
T ss_pred HHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998887777777777777
Q ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 742 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 821 (1293)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1293)
++|.+..+++.+..+.+-+..++...|.+.+++|+|+|..|.+..+++.+..+...+...........+.....+...+.
T Consensus 306 ~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~ 385 (716)
T KOG0058|consen 306 KIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLA 385 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHH
Confidence 77877777777777777788888999999999999999999999999999988888877666555544444444444443
Q ss_pred HHHHHHHH--HHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCC
Q 000774 822 IWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRP 899 (1293)
Q Consensus 822 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~ 899 (1293)
...+.++. ++..+..+ .+.+..++.|...+...+..+...+..+.+...|.+|+.++++.++.-+.. ...
T Consensus 386 ~~siL~~Gg~Lv~~g~mt-----~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~---G~~ 457 (716)
T KOG0058|consen 386 VLSILFYGGHLVLTGSLT-----SGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT---GTL 457 (716)
T ss_pred HHHHHHhccchhhcCccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC---Ccc
Confidence 33333332 23344444 556666777888888899999999999999999999999999876653321 111
Q ss_pred CCCCCCCccEEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC
Q 000774 900 PPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG 978 (1293)
Q Consensus 900 ~~~~~~~g~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~ 978 (1293)
.+. ...|.|+|+||+|+|+.+ ..++|+|+||+|+|||+||+|||||+||||++++|.++|+|++|+|.+||+||++++
T Consensus 458 ~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~ 536 (716)
T KOG0058|consen 458 APD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDIN 536 (716)
T ss_pred ccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcC
Confidence 111 357889999999999754 236999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 979 LMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 979 ~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
+..+|++||+|.|+|.||++||+|||.+.. +.+++++..|++.+++++||..+|+||||.++|+|.+||||||||+|||
T Consensus 537 ~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIA 616 (716)
T KOG0058|consen 537 HKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIA 616 (716)
T ss_pred HHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHH
Confidence 999999999999999999999999998654 5689999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCCh
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSS 1137 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~ 1137 (1293)
|||++||+||||||+||+||.++|..++++|.+..+++|||+|+||++++++||+|+|+++|+++|.|+|+||+++.++.
T Consensus 617 RALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gl 696 (716)
T KOG0058|consen 617 RALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNGL 696 (716)
T ss_pred HHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred HHHHHHhh
Q 000774 1138 FSKMVQST 1145 (1293)
Q Consensus 1138 ~~~l~~~~ 1145 (1293)
|+++++.+
T Consensus 697 y~~Lv~~q 704 (716)
T KOG0058|consen 697 YAKLVQRQ 704 (716)
T ss_pred HHHHHHHh
Confidence 99998764
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.7e-77 Score=735.17 Aligned_cols=550 Identities=28% Similarity=0.401 Sum_probs=469.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 585 LWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDA 662 (1293)
Q Consensus 585 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 662 (1293)
+..+.-+++..++.+.+.++.|.+....+|........... ....+.++++...++.+++.+++.+.+.+....+-.+
T Consensus 153 ~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~ 232 (709)
T COG2274 153 RRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGR 232 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34455666777788888899999999888887654443332 3344555677788999999999999999999999999
Q ss_pred HHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 663 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYL 742 (1293)
Q Consensus 663 ~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 742 (1293)
+++|++++|+.||+++++|++++|+ +|++.|.+++...+...+..+.+.++.++++++++|.+.++.+..++++..+..
T Consensus 233 ~~~hll~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~ 311 (709)
T COG2274 233 FFRHLLRLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITL 311 (709)
T ss_pred HHHHHHcCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 679999999998888888888889999999999999988887777776666666
Q ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 743 YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMI 822 (1293)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (1293)
.+.+..++..+......+...+.+.|++.|+.++|+.+.|.++..++++...+..+..+.......+......++..+..
T Consensus 312 ~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 391 (709)
T COG2274 312 IFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSS 391 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 66666666555556666777889999999999999999999999999988888888877777666666655555544433
Q ss_pred HHHHHHHH--HhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCC
Q 000774 823 WLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 900 (1293)
Q Consensus 823 ~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~ 900 (1293)
+++.++.+ +..+..+ .+.+..+.+...++..++..+.+.+..++....+.+|+.++++.|+|.+... .+.
T Consensus 392 v~iL~~G~~lVl~~~lT-----lG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~---~~~ 463 (709)
T COG2274 392 VLILWFGAILVLEGELT-----LGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK---TLI 463 (709)
T ss_pred HHHHHHHHHHHhcCCcc-----hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc---ccc
Confidence 33333322 2233333 3344444455567888899999999999999999999999999988753211 122
Q ss_pred CCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH
Q 000774 901 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 980 (1293)
Q Consensus 901 ~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~ 980 (1293)
..++..|.|+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+|+|+|+|+|++|+|++||.|++++++.
T Consensus 464 ~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~ 543 (709)
T COG2274 464 HLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLA 543 (709)
T ss_pred cccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHH
Confidence 33456789999999999998777899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
++|++|||||||+.+|+|||+||+.+.++ .+++++++|++.+++++++.++|.||+|.++|+|.+|||||||||+||||
T Consensus 544 ~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARa 623 (709)
T COG2274 544 SLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARA 623 (709)
T ss_pred HHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999997765 46799999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHH
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 1139 (1293)
|+++|+|||||||||+||++|++.|.+.|.+...++|+|+||||++++++||||+||++|+|+++|+|+|+++. ++.|.
T Consensus 624 Ll~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~ 702 (709)
T COG2274 624 LLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYA 702 (709)
T ss_pred hccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHH
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999987 77888
Q ss_pred HHHHh
Q 000774 1140 KMVQS 1144 (1293)
Q Consensus 1140 ~l~~~ 1144 (1293)
++++.
T Consensus 703 ~l~~~ 707 (709)
T COG2274 703 RLYQQ 707 (709)
T ss_pred HHHhc
Confidence 77754
No 11
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-77 Score=706.53 Aligned_cols=497 Identities=23% Similarity=0.310 Sum_probs=445.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000774 14 AFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQV-CQALHTLW 92 (1293)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~-~~~l~~~~ 92 (1293)
+.++.+..+++.++.....+.....+.++..++|..+|+++++....+|+++.+||+++|++.|+..+.+. ...+...+
T Consensus 191 ~~~l~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~l 270 (716)
T KOG0058|consen 191 CTILLGLFLIGALANAIRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGL 270 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 44555667777788777778788899999999999999999999999999999999999999999999884 46777888
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHH
Q 000774 93 SAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQ 172 (1293)
Q Consensus 93 ~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~ 172 (1293)
-..++.++++.+|++..|.++++.++.+|+++.+..++++..++..++.++..++..+...|.+++|+|||+|+.|+...
T Consensus 271 R~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~ 350 (716)
T KOG0058|consen 271 RNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEV 350 (716)
T ss_pred HHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 173 SKVQNVRNDELSWFRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQ 250 (1293)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~ 250 (1293)
+++.+.-++..+..+|.......+....++.. ..+.++++|++++..|.+|+|.+.+|+.+-..+..++..+...++.
T Consensus 351 ~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~ 430 (716)
T KOG0058|consen 351 KRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSE 430 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888877776665555544444433 3456788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCCCC-CCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHH
Q 000774 251 VVNANVSLKRMEEFLLAEEKILLPNPPLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSL 329 (1293)
Q Consensus 251 ~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~-~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTL 329 (1293)
++++..|.+|+.++++.+|.........+ .-...|+|+||+|+||.+++.++|+|+||+|+|||.+|||||||+||||+
T Consensus 431 lmkgvGAs~rvFel~dr~P~i~~~G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTi 510 (716)
T KOG0058|consen 431 LMKGVGASERVFELMDRKPRIPLTGTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTI 510 (716)
T ss_pred HHHhcchHHHHHHHhccCCCCCCCCccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHH
Confidence 99999999999999998876533321111 23457999999999999888899999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcC
Q 000774 330 ISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLL 396 (1293)
Q Consensus 330 l~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l 396 (1293)
+++|.++|+|++|.+. .+|++||+|.|+|.||++||+|||.+|.+ .++++++++++.+..++++..+
T Consensus 511 asLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~ 590 (716)
T KOG0058|consen 511 ASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNF 590 (716)
T ss_pred HHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhC
Confidence 9999999999998432 25678999999999999999999999975 5789999999999999999999
Q ss_pred CCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhC
Q 000774 397 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV 476 (1293)
Q Consensus 397 ~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~ 476 (1293)
|+||+|.+||+|..|||||||||||||||++||.||||||+||+||.+++..+-+ .+....+++|||+|+||++++++|
T Consensus 591 p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~-aL~~~~~~rTVlvIAHRLSTV~~A 669 (716)
T KOG0058|consen 591 PDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQE-ALDRLMQGRTVLVIAHRLSTVRHA 669 (716)
T ss_pred ccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHH-HHHHhhcCCeEEEEehhhhHhhhc
Confidence 9999999999999999999999999999999999999999999999998877754 566667889999999999999999
Q ss_pred CeEEEEeCCeEEEecChHHHhhcc-HHHHHHHHHhc
Q 000774 477 DRIILVHEGMVKEEGTFEDLSNNG-ELFQKLMENAG 511 (1293)
Q Consensus 477 d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~ 511 (1293)
|+|+++++|++++.|+|+||++.. +.|.++++.+.
T Consensus 670 d~Ivvi~~G~V~E~G~h~eLl~~~~gly~~Lv~~q~ 705 (716)
T KOG0058|consen 670 DQIVVIDKGRVVEMGTHDELLSKPNGLYAKLVQRQL 705 (716)
T ss_pred cEEEEEcCCeEEecccHHHHhhCcccHHHHHHHHhc
Confidence 999999999999999999999987 79999987653
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.9e-73 Score=703.83 Aligned_cols=496 Identities=24% Similarity=0.377 Sum_probs=444.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHH
Q 000774 11 YIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALH 89 (1293)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~ 89 (1293)
+++++++++..++..++.....+...+++.|+...+..++|+|++++|..+++++++|++++|+ +|.+.|++++ ..+.
T Consensus 194 ~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l 272 (709)
T COG2274 194 TVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRV-RELEQIREFLTGSIL 272 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHH
Confidence 3445556666777777777888888899999999999999999999999999999999999996 7899999876 5677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 000774 90 TLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWEN 169 (1293)
Q Consensus 90 ~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~ 169 (1293)
..+...+.+++.+++|+++.|.+++++++.+++++.+..++.+..++..++..+...+..+.+.|.++|+++||..+.|+
T Consensus 273 ~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~ 352 (709)
T COG2274 273 TLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEP 352 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhH
Confidence 77777777888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 170 SFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNM 247 (1293)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~ 247 (1293)
.+..+|++...+..+...+..........+..++..+ +.++++|++.++.|.+|.|.++++.++...+..|+..+.+.
T Consensus 353 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~ 432 (709)
T COG2274 353 RFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQL 432 (709)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHH
Confidence 9999999999998888777776666666555554433 56788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccCCC--CCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCc
Q 000774 248 ITQVVNANVSLKRMEEFLLAEEKILLPN--PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 325 (1293)
Q Consensus 248 ~~~~~~~~~s~~Ri~~~l~~~~~~~~~~--~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsG 325 (1293)
+..++++..+.+|+.++++.|++...+. ...+.-...|+++||+|+|+.+ ++++|+|+||+|++||++||||+||||
T Consensus 433 ~~~~q~~~~~~~rL~dil~~~~E~~~~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsG 511 (709)
T COG2274 433 WTDFQQAKVALERLGDILDTPPEQEGDKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSG 511 (709)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCC
Confidence 9999999999999999999887753322 1122334579999999999853 458999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCCC-CHHHHHHHHHHcCChhH
Q 000774 326 KTSLISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHD 392 (1293)
Q Consensus 326 KSTLl~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~-~~~~~~~~~~~~~l~~~ 392 (1293)
||||+|+|+|+|+|++|... .+|+.||||+|++.+|++||+|||.++++. +.+++.++++.++.+++
T Consensus 512 KSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~f 591 (709)
T COG2274 512 KSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEF 591 (709)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHH
Confidence 99999999999999999432 256789999999999999999999999875 55899999999999999
Q ss_pred HhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcch
Q 000774 393 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 472 (1293)
Q Consensus 393 ~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~ 472 (1293)
+..+|.||+|.+||+|.+||||||||++|||||+++|+|||||||||+||+++++.+.+++.+ ..+|+|+|+||||++.
T Consensus 592 I~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~-~~~~~T~I~IaHRl~t 670 (709)
T COG2274 592 IENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQ-ILQGRTVIIIAHRLST 670 (709)
T ss_pred HHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHH-HhcCCeEEEEEccchH
Confidence 999999999999999999999999999999999999999999999999999999999987654 5678999999999999
Q ss_pred hhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHHHH
Q 000774 473 LSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 509 (1293)
Q Consensus 473 l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 509 (1293)
+++||||+||++|+|+++|+|+|+++.++.|.+++..
T Consensus 671 i~~adrIiVl~~Gkiv~~gs~~ell~~~g~y~~l~~~ 707 (709)
T COG2274 671 IRSADRIIVLDQGKIVEQGSHEELLAQGGLYARLYQQ 707 (709)
T ss_pred hhhccEEEEccCCceeccCCHHHHHHhcChHHHHHhc
Confidence 9999999999999999999999999999999988764
No 13
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-71 Score=701.32 Aligned_cols=565 Identities=20% Similarity=0.257 Sum_probs=437.7
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCC-C-Cc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 573 KVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKT-H-GP-LFYNTIYSLLSFGQVLVTLANSYWLI 649 (1293)
Q Consensus 573 ~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~-~-~~-~~~~~~~~~l~~~~~~~~~~~~~~~~ 649 (1293)
+.+++|.++. ++.+++.+++.++...+....|+.+...+|...... . .. ..+..++.++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPA--KRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555433 233445556666667777777877777666432111 1 11 12333444455667778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 650 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 729 (1293)
Q Consensus 650 ~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1293)
..+.+...++|.+++++++++|..+|+++++|++++|+++|++.++..+...+..++..++.++..++++++++|.+.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888888888888888888888888877665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 730 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 809 (1293)
Q Consensus 730 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1293)
++..+++...+...+.+..++..+......+.+.+.+.|.++|+++||+|+.++++.+++.+..+...+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444444444444555555555555566678889999999999999999999999888887777766655544443333
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhcCcccchh---hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000774 810 LAIRLEIVGGLMIWLTAT-FAVVQNGSAENQE---AF-ASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYI 884 (1293)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~-~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~ 884 (1293)
......++..+..++++. ......+..+... .+ ......++.+...+..++..+......+.....+.+|+.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 328 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333222211111 1111112222111 01 111122234455667788888888888999999999999999
Q ss_pred cCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCc
Q 000774 885 ELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER 964 (1293)
Q Consensus 885 ~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~ 964 (1293)
+.+++.+.. ...+. ..+..+.|+++||+|.|.++ +++|+|+||+|+|||++||+||||||||||+++|+|++ |++
T Consensus 329 ~~~~~~~~~--~~~~~-~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 329 ETPLAHPQQ--GEKEL-ASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred cCCCcccCC--Ccccc-CCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 876542211 11000 11123469999999877544 47999999999999999999999999999999999999 999
Q ss_pred ceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCC
Q 000774 965 GRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAG 1043 (1293)
Q Consensus 965 G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~ 1043 (1293)
|+|.+||+|+++++++++|++|+||||+|++|++||+|||.++. +.++++++++++.++++++++++|+|+||.++++|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 99999999999999999999999999999999999999999874 57899999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEee
Q 000774 1044 ENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLE 1123 (1293)
Q Consensus 1044 ~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~ 1123 (1293)
.+|||||||||+||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||++++..||+|++|++|++++
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e 563 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQ 563 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEee
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred ecChhhhhhcCCChHHHHHHhh
Q 000774 1124 YDTPEELLSNEGSSFSKMVQST 1145 (1293)
Q Consensus 1124 ~g~~~el~~~~~~~~~~l~~~~ 1145 (1293)
.|+|+||+++ ++.|++++..+
T Consensus 564 ~G~~~eL~~~-~~~y~~l~~~q 584 (588)
T PRK11174 564 QGDYAELSQA-GGLFATLLAHR 584 (588)
T ss_pred cCCHHHHHhc-chHHHHHHHHh
Confidence 9999999975 46788777653
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.1e-71 Score=690.78 Aligned_cols=547 Identities=31% Similarity=0.432 Sum_probs=437.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 587 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 666 (1293)
Q Consensus 587 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 666 (1293)
.+...+++.++...+....+.++....+...........+...+.++.++..++.++..++..+.+.+...++|.+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~ 94 (567)
T COG1132 15 LLLLAILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEK 94 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555566667777777777766554431111112233344445556677777778888888899999999999999
Q ss_pred HHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 667 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 746 (1293)
Q Consensus 667 ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 746 (1293)
+++.|+.+|+++++|++++|+++|++.++..+......+...++.+++.+++++..+|.+.++++...+++......+.+
T Consensus 95 l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~ 174 (567)
T COG1132 95 LLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLAR 174 (567)
T ss_pred HHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988887555555677788888888888887766655544444444444443
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 747 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTA 826 (1293)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (1293)
..++..+......+.+.+.+.|.++|++++|+|+.++...+++.+..+...+.................++..+...+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (567)
T COG1132 175 KSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVL 254 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666778899999999999999999999987777666666655555433333333333223333222222222
Q ss_pred HHHH--HhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCC
Q 000774 827 TFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 904 (1293)
Q Consensus 827 ~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~ 904 (1293)
.+.. +..+..+ .+.+..++.+...+..++..+......++....+.+|+.++++.+++... ...+ ...
T Consensus 255 ~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~--~~~ 324 (567)
T COG1132 255 ALGGFLVLSGSLT-----VGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPDP--LKD 324 (567)
T ss_pred HHHHHHHHcCCCC-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCCC--CCC
Confidence 1111 2233333 55667777888888889999999999999999999999999987554211 1111 123
Q ss_pred CCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhh
Q 000774 905 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 984 (1293)
Q Consensus 905 ~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~ 984 (1293)
..+.|+++||+|+|+++ +++|+|+||+++|||++||||||||||||++++|+|+|+|++|+|.+||+|+++++..++|+
T Consensus 325 ~~~~I~f~~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~ 403 (567)
T COG1132 325 TIGSIEFENVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRK 403 (567)
T ss_pred CCCeEEEEEEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHH
Confidence 44679999999999853 37999999999999999999999999999999999999999999999999999999999999
Q ss_pred hceEEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 985 ILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
+|++|||+|.||++||++||.++.+ .++++++++++.++++++++++|+|+||.++++|.+|||||||||+||||++++
T Consensus 404 ~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~ 483 (567)
T COG1132 404 RIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRN 483 (567)
T ss_pred hccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998865 689999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHH
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~ 1143 (1293)
|+|||||||||+||++|++.|++.+++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ ++.|+++++
T Consensus 484 ~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~ 562 (567)
T COG1132 484 PPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQ 562 (567)
T ss_pred CCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHH
Confidence 9999999999999999999999999988888999999999999999999999999999999999999987 789999987
Q ss_pred hh
Q 000774 1144 ST 1145 (1293)
Q Consensus 1144 ~~ 1145 (1293)
.+
T Consensus 563 ~~ 564 (567)
T COG1132 563 AQ 564 (567)
T ss_pred Hh
Confidence 64
No 15
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.8e-70 Score=699.00 Aligned_cols=544 Identities=24% Similarity=0.298 Sum_probs=440.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 586 WVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 663 (1293)
Q Consensus 586 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 663 (1293)
+.+...+++.++..++....|.++...+|........... ....++++.++..++.+++.++....+.+...+++..+
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (686)
T TIGR03797 136 RDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAV 215 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566667777778888888888777655322211111 23344455666778889999999999999999999999
Q ss_pred HHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 664 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 743 (1293)
Q Consensus 664 ~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 743 (1293)
+++++++|+.||+++++|++++|++ |++.+++.+...+...+......+..++++++++|.+.++++.++++.+.+...
T Consensus 216 ~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~ 294 (686)
T TIGR03797 216 WDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLV 294 (686)
T ss_pred HHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 789998887776666666666666777778888887777666555554445555
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 744 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW 823 (1293)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1293)
+.+..++..+......+...+.+.|.++|+.++|+++.++++.+++.+..+...+..........+......++..+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 374 (686)
T TIGR03797 295 LGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSA 374 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544444455555566788999999999999999999999988888888877776666655555555444443332222
Q ss_pred HHHHHH--HHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCC
Q 000774 824 LTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 901 (1293)
Q Consensus 824 ~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~ 901 (1293)
++.++. .+..+..+ .+.+..+..+...+..++..+...+..++....+.+|+.++++.++|.+.. ...
T Consensus 375 ~il~~g~~lv~~g~lt-----iG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~-- 444 (686)
T TIGR03797 375 ALFAAAISLLGGAGLS-----LGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KTD-- 444 (686)
T ss_pred HHHHHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cCC--
Confidence 222221 12344444 444445556666777888889999999999999999999999876553211 111
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
..+..+.|+++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|.+||+|++++++.+
T Consensus 445 ~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~ 524 (686)
T TIGR03797 445 PGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQA 524 (686)
T ss_pred CCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHH
Confidence 11234579999999999755567999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
+|++||||||+|.+|++||+|||.++.+.++++++++++.++++++++++|.|+||.++++|.+||||||||++|||||+
T Consensus 525 lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll 604 (686)
T TIGR03797 525 VRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALV 604 (686)
T ss_pred HHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999987668899999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHH
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 1141 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l 1141 (1293)
++|+|||||||||+||+++++.+.+.|++. ++|+|+||||++++..||+|++|++|++++.|+|+||+++ ++.|+++
T Consensus 605 ~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l 681 (686)
T TIGR03797 605 RKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQL 681 (686)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHH
Confidence 999999999999999999999999999985 6899999999999999999999999999999999999975 5678877
Q ss_pred HH
Q 000774 1142 VQ 1143 (1293)
Q Consensus 1142 ~~ 1143 (1293)
+.
T Consensus 682 ~~ 683 (686)
T TIGR03797 682 AR 683 (686)
T ss_pred HH
Confidence 65
No 16
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.4e-70 Score=695.53 Aligned_cols=543 Identities=24% Similarity=0.344 Sum_probs=438.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 586 WVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 663 (1293)
Q Consensus 586 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 663 (1293)
+.+...+++.++...+....|.+....+|..........+ ...++.++.++..++.+++.++......+...++|.++
T Consensus 161 ~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l 240 (711)
T TIGR00958 161 PWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDL 240 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566667777788888888888777654322111111 23334445566777788888899999999999999999
Q ss_pred HHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 664 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 743 (1293)
Q Consensus 664 ~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 743 (1293)
+++++++|+.||+++++|++++|+++|++.+++.+...+..++..+..+++.+++++.++|.+.++++..+++.+.+...
T Consensus 241 ~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~ 320 (711)
T TIGR00958 241 FRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKV 320 (711)
T ss_pred HHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888888888888888888889988777665555555555556
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q 000774 744 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAI---RLEIVGGL 820 (1293)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 820 (1293)
+.+..++..+......+...+.+.|.++|+++||+|+.++++.+++.+..++..+.............. ....+..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (711)
T TIGR00958 321 FGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQV 400 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666556555555666677889999999999999999999998888888777766554433322222222 22222222
Q ss_pred HHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCC
Q 000774 821 MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 900 (1293)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~ 900 (1293)
+++..+.+ .+..+..+ .+.+..++.+...+..++..+......++....+.+|+.++++.+++.+.. .. .
T Consensus 401 ~il~~g~~-lv~~g~it-----~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~~-~ 470 (711)
T TIGR00958 401 LVLYYGGQ-LVLTGKVS-----SGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT---GT-L 470 (711)
T ss_pred HHHHHHHH-HHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC---CC-C
Confidence 22222222 23344444 455666677778888899999999999999999999999999866543211 11 1
Q ss_pred CCCCCCccEEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh
Q 000774 901 PGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL 979 (1293)
Q Consensus 901 ~~~~~~g~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~ 979 (1293)
..++..+.|+++||+|+|++. .+++|+|+||+|+|||++|||||||||||||+++|+|+++|++|+|.+||+|+++++.
T Consensus 471 ~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~ 550 (711)
T TIGR00958 471 APLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDH 550 (711)
T ss_pred CCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCH
Confidence 112345679999999999753 2479999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
+.+|++|+||||+|.+|++||||||.+.. +.++++++++++.++++++++++|.|+||.+++.|.+|||||||||+|||
T Consensus 551 ~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalAR 630 (711)
T TIGR00958 551 HYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIAR 630 (711)
T ss_pred HHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999998664 46789999999999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChH
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSF 1138 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~ 1138 (1293)
|++++|+|||||||||+||+++++.+++ ....+++|+|+||||++++..||+|++|++|+|++.|+|+||+++ ++.|
T Consensus 631 ALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~-~~~y 707 (711)
T TIGR00958 631 ALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMED-QGCY 707 (711)
T ss_pred HHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhC-CCch
Confidence 9999999999999999999999999999 333478999999999999999999999999999999999999976 4567
Q ss_pred HHH
Q 000774 1139 SKM 1141 (1293)
Q Consensus 1139 ~~l 1141 (1293)
+++
T Consensus 708 ~~l 710 (711)
T TIGR00958 708 KHL 710 (711)
T ss_pred Hhc
Confidence 654
No 17
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.8e-70 Score=686.59 Aligned_cols=492 Identities=21% Similarity=0.281 Sum_probs=405.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000774 14 AFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLW 92 (1293)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~ 92 (1293)
+++++++.++..++.....+...+.+.++...+|..+|+|++++|..++++.++|++++++++|++.+++++ ..+..++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~ 145 (588)
T PRK11174 66 FILLILLFVLRALLAWLRERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMA 145 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 334445556666777777777888999999999999999999999999999999999999999999999876 4566777
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHH
Q 000774 93 SAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQ 172 (1293)
Q Consensus 93 ~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~ 172 (1293)
..++.++++++++++..|+++++.++++++++.+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.
T Consensus 146 ~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~ 225 (588)
T PRK11174 146 LAVLVPLLILIAVFPINWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAET 225 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHH
Confidence 77777777777788888888888777777777777778888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHH---------HHHHHHHHHHHHHHH
Q 000774 173 SKVQNVRNDELSWFRKAQFLAACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPAR---------AFTSLSLFAVLRFPL 241 (1293)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~lt~~~---------~~~~l~~~~~l~~pl 241 (1293)
+++.+..++..+...+..........+...+..+ +.++.++++.+. |.+++|. +++++.+...+..|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl 304 (588)
T PRK11174 226 ESIRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPL 304 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHH
Confidence 9887776666555444444333333332222221 122233333333 5555553 344446667778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCC-CCC-CCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEE
Q 000774 242 FMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP-PLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIV 319 (1293)
Q Consensus 242 ~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~-~~~-~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lv 319 (1293)
..++..+..+.++.++++||.++++.+++...... ..+ .....|+++||+|.|++ ++++|+|+||+|++|+++|||
T Consensus 305 ~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIv 382 (588)
T PRK11174 305 RDLGTFYHAKAQAVGAAESLVTFLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALV 382 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEE
Confidence 99999999999999999999999987653211111 111 12235999999987753 468999999999999999999
Q ss_pred cCCCCcHHHHHHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHH
Q 000774 320 GGTGEGKTSLISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDV 386 (1293)
Q Consensus 320 G~~GsGKSTLl~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~ 386 (1293)
||||||||||+++|+|++ |++|... .+|+.|+||||+|++|++||+|||.+|++ .++++++++++.
T Consensus 383 G~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~ 461 (588)
T PRK11174 383 GPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALEN 461 (588)
T ss_pred CCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHH
Confidence 999999999999999999 8888421 13457999999999999999999999964 789999999999
Q ss_pred cCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEE
Q 000774 387 TSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLV 466 (1293)
Q Consensus 387 ~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~v 466 (1293)
|+++++++.+|+|++|.+||+|.+|||||||||+|||||+++|+|||||||||+||+++++.+.+.+ ....+++|+|+|
T Consensus 462 a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l-~~~~~~~TvIiI 540 (588)
T PRK11174 462 AWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQAL-NAASRRQTTLMV 540 (588)
T ss_pred hCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHHhCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999998755 445678999999
Q ss_pred ecCcchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHHHHh
Q 000774 467 TNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 510 (1293)
Q Consensus 467 tH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 510 (1293)
|||++.++.||+|++|++|+++++|+|+|++++++.|++++..+
T Consensus 541 tHrl~~i~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 541 THQLEDLAQWDQIWVMQDGQIVQQGDYAELSQAGGLFATLLAHR 584 (588)
T ss_pred ecChHHHHhCCEEEEEeCCeEeecCCHHHHHhcchHHHHHHHHh
Confidence 99999999999999999999999999999999999999998764
No 18
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1e-69 Score=696.32 Aligned_cols=557 Identities=21% Similarity=0.294 Sum_probs=443.0
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCch-H-HHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 572 FKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL-F-YNTIYSLLSFGQVLVTLANSYWLI 649 (1293)
Q Consensus 572 ~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~ 649 (1293)
++.++.+++.. .+.+...+++.++..++.+..|.++..+.|.......... . +...+.++.+...++.+++.++..
T Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQ--KKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444432 2334455566667777778888888888776543221111 1 222334445566778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 650 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 729 (1293)
Q Consensus 650 ~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1293)
..+.+...+++.+++++++++|+.||+++++|++++|++ |+..+.+.+.......+..+..++..++++++++|.+.++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 300 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLL 300 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999998 8999988777666666666666666777777888877766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 730 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 809 (1293)
Q Consensus 730 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1293)
++..+++++.+...+.+..++..+......+...+.+.|+++|+++||+++.++++.+++.+......+..........+
T Consensus 301 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (708)
T TIGR01193 301 SLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQG 380 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555556666666666666667778889999999999999999999998888877776665555444333333
Q ss_pred HHHHHHHH---HHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 000774 810 LAIRLEIV---GGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL 886 (1293)
Q Consensus 810 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~ 886 (1293)
......++ ..+++++++.+. +..+..+ .+.+..+..+...+..++..+......++....+.+|+.++++.
T Consensus 381 ~~~~~~~~~~~~~i~il~~g~~l-v~~g~ls-----~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 381 QQAIKAVTKLILNVVILWTGAYL-VMRGKLT-----LGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33222222 222222222222 2344444 44555566677778888999999999999999999999999987
Q ss_pred CCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcce
Q 000774 887 PSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGR 966 (1293)
Q Consensus 887 ~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~ 966 (1293)
++|.+... .....++..+.|+++||+|+|+++ +++|+|+||+|+|||++||+||||||||||+++|+|+|+|++|+
T Consensus 455 ~~e~~~~~---~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 455 DSEFINKK---KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred CCcccccc---cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 76543211 101112345679999999999743 47999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCC--CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCC
Q 000774 967 ILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF--SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE 1044 (1293)
Q Consensus 967 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~--~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~ 1044 (1293)
|.+||+|+++++++++|++||||||+|.+|++||+|||.++ .+.++++++++++.++++++++++|.|+||.++++|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99999999999999999999999999999999999999976 3568899999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeee
Q 000774 1045 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1045 ~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 1124 (1293)
+|||||||||+||||++++|+|||||||||+||+++++.+++.|++. +++|+|+||||++++..||+|++|++|++++.
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~ 689 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQ 689 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999985 68999999999999999999999999999999
Q ss_pred cChhhhhhcCCChHHHHHH
Q 000774 1125 DTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1125 g~~~el~~~~~~~~~~l~~ 1143 (1293)
|+|+||+++ ++.|+++++
T Consensus 690 G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 690 GSHDELLDR-NGFYASLIH 707 (708)
T ss_pred CCHHHHHhc-CCcHHHHhh
Confidence 999999975 567877664
No 19
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-69 Score=696.66 Aligned_cols=560 Identities=23% Similarity=0.313 Sum_probs=446.1
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCch--HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 572 FKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL--FYNTIYSLLSFGQVLVTLANSYWLI 649 (1293)
Q Consensus 572 ~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~ 649 (1293)
++.++++++.. +..+...+++.++..++....|.++...+|.......... .+...+.++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGS--RGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445444432 2333445555566667777778888777765432222221 1233344455667788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 650 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 729 (1293)
Q Consensus 650 ~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1293)
..+.+...+++.+++++++++|+.||+++++|++++|+++| ..+.+.+...+...+..+..++..++++++++|.+.++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 67888887777777777888888888888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 730 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 809 (1293)
Q Consensus 730 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1293)
.+.++++.+.+...+.+..++..+......+...+.+.|.++|+.+||+++.++.+.+++.+......+..........+
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666555555555655555555555566678889999999999999999999998888887777666655554444444
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 000774 810 LAIRLEIVGGLMIWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 887 (1293)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~ 887 (1293)
......++..+...++.++. .+..+..+ .+.+..+..+...+..++..+...+..++....+.+|+.++++.+
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt-----~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~ 453 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLT-----IGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNP 453 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44443333332222222211 22344444 445555666777788888999999999999999999999999877
Q ss_pred CCCccccCC--C-CCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCc
Q 000774 888 SEAPLVIES--N-RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER 964 (1293)
Q Consensus 888 ~e~~~~~~~--~-~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~ 964 (1293)
+|.+..... . ...+.++..+.|+++||+|+|++..+++|+|+||+|+|||++||+||||||||||+++|+|+|+|++
T Consensus 454 ~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~ 533 (710)
T TIGR03796 454 VDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWS 533 (710)
T ss_pred CccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 654321100 0 0001022356799999999998655679999999999999999999999999999999999999999
Q ss_pred ceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCC
Q 000774 965 GRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAG 1043 (1293)
Q Consensus 965 G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~ 1043 (1293)
|+|.+||.|++++++.++|++||||||+|.+|++||||||.++. +.++++++++++.++++++++++|.|+||.++++|
T Consensus 534 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 534 GEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred cEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 99999999999999999999999999999999999999998764 56899999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEee
Q 000774 1044 ENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLE 1123 (1293)
Q Consensus 1044 ~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~ 1123 (1293)
.+|||||||||+|||||+++|+|||||||||+||+++++.+.+.|++ .++|+|+||||++++..||||++|++|++++
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~ 691 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQ 691 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999987 6899999999999999999999999999999
Q ss_pred ecChhhhhhcCCChHHHHH
Q 000774 1124 YDTPEELLSNEGSSFSKMV 1142 (1293)
Q Consensus 1124 ~g~~~el~~~~~~~~~~l~ 1142 (1293)
.|+|+||+++ ++.|++++
T Consensus 692 ~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 692 RGTHEELWAV-GGAYARLI 709 (710)
T ss_pred ecCHHHHHHc-CCcHHHHh
Confidence 9999999975 56677665
No 20
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2e-71 Score=651.07 Aligned_cols=465 Identities=25% Similarity=0.400 Sum_probs=353.9
Q ss_pred cEEEEeeEEEcCCCCCC-CceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCC----CCCcee------------
Q 000774 284 AISIRNGYFSWDSKAER-PTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV----SDASAV------------ 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~-~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~----~g~~~~------------ 346 (1293)
.++++|++..|....+. ++++||||+|.+||++||||+|||||||++++|.|++++. +|.+..
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 68999999999754322 5999999999999999999999999999999999999886 453211
Q ss_pred ----ecCcEEEEcCCccc-cC--ccHHHHHcc----CCCCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCC
Q 000774 347 ----IRGTVAYVPQVSWI-FN--ATVRDNILF----GSAFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNI 411 (1293)
Q Consensus 347 ----~~~~i~~v~Q~~~l-~~--~Tv~eni~~----g~~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~L 411 (1293)
..+.|+|+||+|.= +| .||.+-|.- ....+ .++..+.++.+++.+.... ....+.|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 12369999999863 54 477766642 22221 2344556777777655443 2234699
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchhhh-CCeEEEEeCCeEEE
Q 000774 412 SGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKE 489 (1293)
Q Consensus 412 SGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~ 489 (1293)
|||||||+.||+||+.+|++||+||||++||+.+..+|.+.+.+.. ..|.++|+||||+..+.+ ||||+||++|++++
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999998665543 458999999999999875 89999999999999
Q ss_pred ecChHHHhhccHH-HHH-HHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhc
Q 000774 490 EGTFEDLSNNGEL-FQK-LMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERET 567 (1293)
Q Consensus 490 ~g~~~~l~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1293)
.|+.++++++... |.. ++.. .
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~a--------------------------------~------------------------- 258 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLAA--------------------------------V------------------------- 258 (539)
T ss_pred ecCHHHHHhccCCcccHHHHhh--------------------------------C-------------------------
Confidence 9999998754210 000 0000 0
Q ss_pred CcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 568 GVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYW 647 (1293)
Q Consensus 568 g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 647 (1293)
T Consensus 259 -------------------------------------------------------------------------------- 258 (539)
T COG1123 259 -------------------------------------------------------------------------------- 258 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 648 LIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSL 727 (1293)
Q Consensus 648 ~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1293)
|.. ..
T Consensus 259 -----------------------p~~--~~-------------------------------------------------- 263 (539)
T COG1123 259 -----------------------PRL--GD-------------------------------------------------- 263 (539)
T ss_pred -----------------------CCc--cc--------------------------------------------------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 728 WAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGAN 807 (1293)
Q Consensus 728 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1293)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 000774 808 RWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 887 (1293)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~ 887 (1293)
......+
T Consensus 264 -------------------------------------------------------------------------~~~~~~~ 270 (539)
T COG1123 264 -------------------------------------------------------------------------EKIIRLP 270 (539)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000000
Q ss_pred CCCccccCCCCCCCCCCCCccEEEEEEEEEecC---------CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhc
Q 000774 888 SEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFR 958 (1293)
Q Consensus 888 ~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~---------~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g 958 (1293)
... +. +....++++|+++.|.. ....+++||||+|++||++||||+||||||||.++|+|
T Consensus 271 ~~~--------~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~g 339 (539)
T COG1123 271 RRG--------PL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAG 339 (539)
T ss_pred ccc--------cc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhC
Confidence 000 00 01124899999999973 12468999999999999999999999999999999999
Q ss_pred CCCCCcceEEECCee--cCCCChHHHhhhceEEccccc--ccc-ccHhhhcC-C---CCCCC----HHHHHHHHHHhhHH
Q 000774 959 IVELERGRILIDGFD--IAKFGLMDLRKILGIIPQSPV--LFS-GTVRFNLD-P---FSEHS----DADLWEALERAHLK 1025 (1293)
Q Consensus 959 ~~~p~~G~I~i~g~~--i~~~~~~~~r~~i~~v~Q~~~--lf~-~ti~~nl~-~---~~~~~----~~~~~~~l~~~~l~ 1025 (1293)
+++|++|+|.++|.| ++.-.....|+++-+|+|||+ |-. .||+++|. + ..... ++.+.+.++.+++.
T Consensus 340 L~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~ 419 (539)
T COG1123 340 LLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLP 419 (539)
T ss_pred CCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCC
Confidence 999999999999987 232234457789999999996 333 49999874 1 11111 12233334444332
Q ss_pred HHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecC
Q 000774 1026 DAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHR 1103 (1293)
Q Consensus 1026 ~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~ 1103 (1293)
. ...+..++.||||||||+||||||..+|++||+|||||+||+-+...+.+.|+++.+ +.|.|+||||
T Consensus 420 ~----------~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHD 489 (539)
T COG1123 420 P----------EFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHD 489 (539)
T ss_pred H----------HHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCC
Confidence 1 146677789999999999999999999999999999999999999999999998754 6999999999
Q ss_pred cchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHHHHHH
Q 000774 1104 LNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1104 ~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~ 1143 (1293)
+..++. ||||+||.+|+|+|.|+.+++.+.....|.+..-
T Consensus 490 l~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~ 530 (539)
T COG1123 490 LAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLL 530 (539)
T ss_pred HHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHH
Confidence 999998 9999999999999999999999877666765443
No 21
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.9e-69 Score=678.35 Aligned_cols=545 Identities=25% Similarity=0.380 Sum_probs=433.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 587 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF----YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDA 662 (1293)
Q Consensus 587 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 662 (1293)
.+...+++.++...+....|.++...+|........... +..++.++.++..++.++..++....+.+...++|.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 103 (592)
T PRK10790 24 PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTD 103 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666777777788888888777654321111111 1122333444566777888888899999999999999
Q ss_pred HHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 663 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYL 742 (1293)
Q Consensus 663 ~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 742 (1293)
+++++++.|..+|++.++|++++|+++|++.++..+...+..++..+..++..++++++++|.+.++++..+++...+..
T Consensus 104 l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~ 183 (592)
T PRK10790 104 VMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMV 183 (592)
T ss_pred HHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888888888888888888888888766554433333333333
Q ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000774 743 YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL-AIRLEIVGGLM 821 (1293)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 821 (1293)
.+.+..+...+......+....++.|.++|+.++|+|+.++++.+++.+..+...+..........+. .....++..++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (592)
T PRK10790 184 IYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALI 263 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444344444444456677888999999999999999999988888877766555544433322221 12222222211
Q ss_pred HHHH-HHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCC
Q 000774 822 IWLT-ATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 900 (1293)
Q Consensus 822 ~~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~ 900 (1293)
..++ ..+.....+..+ .+.+..++.+...+..++..+...+..++....+.+|+.++++.++++... ..
T Consensus 264 ~~~~~~~~~~~~~g~is-----~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~---~~-- 333 (592)
T PRK10790 264 LCGLLMLFGFSASGTIE-----VGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN---DD-- 333 (592)
T ss_pred HHHHHHHHHHHHCCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---Cc--
Confidence 1111 111112334333 455556667777888899999999999999999999999998765432111 11
Q ss_pred CCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH
Q 000774 901 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 980 (1293)
Q Consensus 901 ~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~ 980 (1293)
.++..+.|+++||+|+|+++ +++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.|+++++++
T Consensus 334 -~~~~~~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~ 411 (592)
T PRK10790 334 -RPLQSGRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHS 411 (592)
T ss_pred -cCCCCCeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHH
Confidence 11234579999999999754 4699999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
.+|++|+||||+|.+|++|+++||.++++.++++++++++.++++++++++|+|+||.+++.|.+||||||||++|||||
T Consensus 412 ~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaL 491 (592)
T PRK10790 412 VLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVL 491 (592)
T ss_pred HHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999998877789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHH
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1140 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 1140 (1293)
+++|+|||||||||+||+++++.|.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|+||+++ ++.|++
T Consensus 492 l~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~ 570 (592)
T PRK10790 492 VQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQ 570 (592)
T ss_pred HhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHH
Confidence 9999999999999999999999999999998788999999999999999999999999999999999999976 478888
Q ss_pred HHHh
Q 000774 1141 MVQS 1144 (1293)
Q Consensus 1141 l~~~ 1144 (1293)
+++.
T Consensus 571 l~~~ 574 (592)
T PRK10790 571 MYQL 574 (592)
T ss_pred HHHH
Confidence 8765
No 22
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-71 Score=690.22 Aligned_cols=511 Identities=23% Similarity=0.345 Sum_probs=415.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHH
Q 000774 625 FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNM 704 (1293)
Q Consensus 625 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~ 704 (1293)
.+.+.|..++++..+..++...++...+.|...++|.++++.+||+++.|||.+..|++..|+++|++.+++.+...+..
T Consensus 72 ~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~ 151 (1228)
T KOG0055|consen 72 KVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGN 151 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHH
Confidence 46667778888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHH
Q 000774 705 FMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDR 784 (1293)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~ 784 (1293)
++..+..+++.+++.++..|.+.++++++.++.......+.+........+..+.+..-+...|++.+++|+.+|+.|++
T Consensus 152 ~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~ 231 (1228)
T KOG0055|consen 152 FIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKK 231 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHH
Confidence 99999999999999999999988777666555544444444444444444444555666788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHH
Q 000774 785 MADINGKSMDKNIRYTLVNMGANRWLAIRLEIVG----GLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLL 860 (1293)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 860 (1293)
..+++.+.+....+.............-...++. ++.+|.+..+.. .+..++...+....+ ++.-...+
T Consensus 232 e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~--~~~~~~g~v~~v~~~-----vl~g~~sL 304 (1228)
T KOG0055|consen 232 EIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLIL--NGGYNGGDVITVFFS-----VLIGGMSL 304 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCceEEEEEee-----hhhhhhhh
Confidence 9999999999888887665543332222222222 222222222222 122222111111111 11111123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCC-CCceeeeeEEecCCCEE
Q 000774 861 TAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKV 939 (1293)
Q Consensus 861 ~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~-~~~l~~vsl~i~~Ge~v 939 (1293)
+........+.+...++.++.+.++..+......+... ......|.|+|+||+|+|+.+. .++|+|+||+|++|+.|
T Consensus 305 gqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~--~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~v 382 (1228)
T KOG0055|consen 305 GQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGR--VLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTV 382 (1228)
T ss_pred hccccchHHHhccccchHHHHHHhcCCCCCCcccccCC--cccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEE
Confidence 33344445556677888899988874433211111111 1123468899999999998653 36999999999999999
Q ss_pred EEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHH
Q 000774 940 GIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEA 1018 (1293)
Q Consensus 940 ~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~ 1018 (1293)
||||||||||||++++|.|+|+|++|+|.+||.|+++++.+++|++||+|.|+|.||++||+||+.+.. +.+++++.++
T Consensus 383 alVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a 462 (1228)
T KOG0055|consen 383 ALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEA 462 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999776 5689999999
Q ss_pred HHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEE
Q 000774 1019 LERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTML 1098 (1293)
Q Consensus 1019 l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi 1098 (1293)
++.+++++|+..+|+|++|.++++|.+||||||||+||||||+++|+|||||||||+||+++++.++++|++..+|+|.|
T Consensus 463 ~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTi 542 (1228)
T KOG0055|consen 463 AKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTI 542 (1228)
T ss_pred HHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHhh
Q 000774 1099 IIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 1145 (1293)
Q Consensus 1099 ~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~~ 1145 (1293)
+||||++++++||+|+||++|+|+|.|+|+||++.. +.|+++++.+
T Consensus 543 vVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q 588 (1228)
T KOG0055|consen 543 VVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQ 588 (1228)
T ss_pred EEeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHH
Confidence 999999999999999999999999999999999876 8999999764
No 23
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-69 Score=618.94 Aligned_cols=501 Identities=21% Similarity=0.325 Sum_probs=418.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHH
Q 000774 632 LLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQ 711 (1293)
Q Consensus 632 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~ 711 (1293)
+++++..+..++..+..+....++-.++|.++|+++...+..-..+..+|+++||+..|++.+|+.+-..+.+++..+..
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~ 145 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVL 145 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHH
Confidence 35666777778888888899999999999999999999999999999999999999999999999999888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHH
Q 000774 712 LLSTFVLIGIVSTMSLWAI-MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADING 790 (1293)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~ 790 (1293)
..+..+...+.++...+.+ ..+++..+.+...+.+..+...+.....++.+.+++.|++.|...++.|+..+.+.+.+.
T Consensus 146 ~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~ 225 (573)
T COG4987 146 IAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE 225 (573)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 7777776766776655433 333344445555556666666666677788899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000774 791 KSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTA-TFAV-VQNGSAENQEAFASTMGLLLSYALNITSLLTAVL-RLA 867 (1293)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~-~~~ 867 (1293)
...+...+..........|....+.++.++++.... +.+. ...|..... ...++.++ +......+..+. ...
T Consensus 226 ~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~---~aa~~ll~--~f~~~eaf~~L~~~A~ 300 (573)
T COG4987 226 ATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQP---GAALALLV--IFAALEAFEPLAPGAF 300 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchh---HHHHHHHH--HHHHHHHHhhhcchhH
Confidence 999999999888888889998888888777666333 3333 222222211 11222222 223333444444 555
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCC
Q 000774 868 SLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGA 947 (1293)
Q Consensus 868 ~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~Gs 947 (1293)
........|+.|+.++.+.++|.... + ...+ .....++++||+|+|+++.+++|+|+||++++||+|||+|+|||
T Consensus 301 ~~lgq~~~Sa~Rl~~i~~q~~e~~~~-~--~~~~--~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGs 375 (573)
T COG4987 301 QHLGQVIASARRLNDILDQKPEVTFP-D--EQTA--TTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGS 375 (573)
T ss_pred HHhhHHHHHHHHHhhhccCCcccCCC-c--cccC--CccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCC
Confidence 67777888999999998766654321 0 1011 11116999999999998877899999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHH
Q 000774 948 GKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKD 1026 (1293)
Q Consensus 948 GKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~ 1026 (1293)
||||++++|.|.++|++|+|.++|.++..++.+++|+.|++++|.+++|++|+|+||...+ +.+||+++++++++++++
T Consensus 376 GKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~ 455 (573)
T COG4987 376 GKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEK 455 (573)
T ss_pred CHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHH
Confidence 9999999999999999999999999999999999999999999999999999999998654 569999999999999999
Q ss_pred HHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcch
Q 000774 1027 AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNT 1106 (1293)
Q Consensus 1027 ~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~ 1106 (1293)
+++..|+||+|+++|.|..|||||||||+|||+|++|.+++||||||.|||+.|++.+.+.|.+..+++|+|+||||+..
T Consensus 456 l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~ 535 (573)
T COG4987 456 LLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRG 535 (573)
T ss_pred HHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHH
Q 000774 1107 IIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1107 ~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~ 1143 (1293)
++.||||+||++|+++++|+|.+|++ +.+.|+++++
T Consensus 536 le~~drIivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 536 LERMDRIIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred HhhcCEEEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 99999999999999999999999998 4578887765
No 24
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-69 Score=628.37 Aligned_cols=497 Identities=22% Similarity=0.323 Sum_probs=426.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHH
Q 000774 11 YIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALH 89 (1293)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~ 89 (1293)
+.+++.++++.+++.++.....+...+.+.+++..+|..+++|+.++++.+.++.++|++.+.++..+|.++.++ .+++
T Consensus 40 ~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLP 119 (559)
T COG4988 40 LPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLP 119 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677788888888888888999999999999999999999999999999999999999999999999877 4677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 000774 90 TLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWEN 169 (1293)
Q Consensus 90 ~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~ 169 (1293)
.+..+.+...+.++.+++..|.++++.++.+|++.+++..++.+.++..++++.......+.+.|.++|+.|+|.|+..+
T Consensus 120 q~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~ 199 (559)
T COG4988 120 QMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTE 199 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccH
Confidence 77777777777777777888888888888888888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 170 SFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVL--VTVVSFGMFTLLG-GDLTPARAFTSLSLFAVLRFPLFMLPN 246 (1293)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~-~~lt~~~~~~~l~~~~~l~~pl~~l~~ 246 (1293)
...+++.+..++..+...+..++...+.+++.+++.+ ..++.+.++.+.+ |+++....+.++.+...++.|++.++.
T Consensus 200 ~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs 279 (559)
T COG4988 200 ATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGS 279 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8888887766665555444444444444444443332 2223344455566 799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCCCC-CCCCCCc--EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCC
Q 000774 247 MITQVVNANVSLKRMEEFLLAEEKILLPNPP-LTSGLPA--ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTG 323 (1293)
Q Consensus 247 ~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~~-~~~~~~~--i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~G 323 (1293)
.+|.-.++..+.+++..+++.|......... .....+. ++.+|++|.|++ ++++++|+||++++|+++||||+||
T Consensus 280 ~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SG 357 (559)
T COG4988 280 FFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASG 357 (559)
T ss_pred HHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCC--CCcccCCceeEecCCcEEEEECCCC
Confidence 9999999999999999999887764322221 1122223 445599999984 3499999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCCh
Q 000774 324 EGKTSLISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQ 390 (1293)
Q Consensus 324 sGKSTLl~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~ 390 (1293)
||||||+++|+|+.+|++|... .++++++||+|+|++|.+|++|||.++++ .+++++.++++.+++.
T Consensus 358 aGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~ 437 (559)
T COG4988 358 AGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLL 437 (559)
T ss_pred CCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHH
Confidence 9999999999999999998432 24678999999999999999999999987 6789999999999999
Q ss_pred hHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCc
Q 000774 391 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 470 (1293)
Q Consensus 391 ~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~ 470 (1293)
++++. |+|+||.+||+|.+|||||+|||+|||||+++++++||||||+|||.++++.|.+.+.+ ..+++|+|+||||+
T Consensus 438 ~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~-l~~~ktvl~itHrl 515 (559)
T COG4988 438 EFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQE-LAKQKTVLVITHRL 515 (559)
T ss_pred HhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHH-HHhCCeEEEEEcCh
Confidence 99999 99999999999999999999999999999999999999999999999999999876554 45679999999999
Q ss_pred chhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHHHHhc
Q 000774 471 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAG 511 (1293)
Q Consensus 471 ~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 511 (1293)
+.+..+|+|++|++|+++++|+|+++.++++.|++++..+.
T Consensus 516 ~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q~ 556 (559)
T COG4988 516 EDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQE 556 (559)
T ss_pred HHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHHh
Confidence 99999999999999999999999999999999999987653
No 25
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.4e-69 Score=671.83 Aligned_cols=545 Identities=22% Similarity=0.309 Sum_probs=428.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCC---ch-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 588 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG---PL-F--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 661 (1293)
Q Consensus 588 ~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~---~~-~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 661 (1293)
+.+.+++.++...+....+..+...++........ .. . ....+.++.++..++.++..++....+.+...++|.
T Consensus 18 ~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 97 (574)
T PRK11160 18 LSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATFRVLTHLRV 97 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555666666677776666665542211110 01 1 122233445667778888888889999999999999
Q ss_pred HHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000774 662 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLF-YAA 740 (1293)
Q Consensus 662 ~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~ 740 (1293)
+++++++++|+.+|++.++|++++|+++|++.++..+...+..++..++.++..++++++++|.+.++++..++++ ..+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~ 177 (574)
T PRK11160 98 FTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGILLLLLLLL 177 (574)
T ss_pred HHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888888888888888888888899988776554333322 223
Q ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 741 YLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL 820 (1293)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1293)
..++.+..++..+......+.+.+.+.|.++|++++|+|+.++++.+++.+..++..+..........+......++..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (574)
T PRK11160 178 PLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQALMILANGL 257 (574)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444555566677888999999999999999999999999888888877776666555555544444444433
Q ss_pred HHHHHHHHHHH-hcCcccchhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCC
Q 000774 821 MIWLTATFAVV-QNGSAENQEAFASTMGLLLSYA-LNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNR 898 (1293)
Q Consensus 821 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~ 898 (1293)
...++..+... ..+..+ .+.+..++.|. .....++..+.......+....+.+|+.++++.+++.+.. ...
T Consensus 258 ~~~~i~~~g~~~~~g~~t-----~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~--~~~ 330 (574)
T PRK11160 258 TVVLMLWLAAGGVGGNAQ-----PGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFP--TTS 330 (574)
T ss_pred HHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc
Confidence 33222222211 123222 12222222222 2234456666777778888899999999999866542111 011
Q ss_pred CCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC
Q 000774 899 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG 978 (1293)
Q Consensus 899 ~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~ 978 (1293)
+. .+..+.|+++||+|+|+++.+++|+|+||+|+|||++||+||||||||||+++|+|+++|++|+|.+||+|+++++
T Consensus 331 ~~--~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~ 408 (574)
T PRK11160 331 TA--AADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYS 408 (574)
T ss_pred CC--CCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCC
Confidence 11 1234579999999999764447999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 979 LMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 979 ~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
..++|++|+||||+|.+|++|++|||.+.. +.++++++++++.+++++++++ |+|+||.++++|.+||||||||++||
T Consensus 409 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialA 487 (574)
T PRK11160 409 EAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIA 487 (574)
T ss_pred HHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999998754 4688999999999999999999 99999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCCh
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSS 1137 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~ 1137 (1293)
||++++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|++++.|+|+||+++ ++.
T Consensus 488 Rall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~g~ 566 (574)
T PRK11160 488 RALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ-QGR 566 (574)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc-CcH
Confidence 9999999999999999999999999999999998889999999999999999999999999999999999999975 567
Q ss_pred HHHHHH
Q 000774 1138 FSKMVQ 1143 (1293)
Q Consensus 1138 ~~~l~~ 1143 (1293)
|+++++
T Consensus 567 y~~l~~ 572 (574)
T PRK11160 567 YYQLKQ 572 (574)
T ss_pred HHHHHh
Confidence 887765
No 26
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.5e-69 Score=687.33 Aligned_cols=536 Identities=24% Similarity=0.344 Sum_probs=433.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 587 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 664 (1293)
Q Consensus 587 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 664 (1293)
.+...+++.++..++....|.++...+|........... +...+.++.++..++.+++.++....+.+...+++..++
T Consensus 148 ~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 227 (694)
T TIGR03375 148 LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLF 227 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666667777788888888777754322221111 222333445567788889999999999999999999999
Q ss_pred HHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 665 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 744 (1293)
Q Consensus 665 ~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 744 (1293)
++++++|+.| +++++|++++|+ +|++.+++.+...+...+..+..++..++++++++|.+.++.+..+++++.+..++
T Consensus 228 ~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~ 305 (694)
T TIGR03375 228 ERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLL 305 (694)
T ss_pred HHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 788999999999 79999999887776666666666777777778888877666655555555555555
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000774 745 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM--- 821 (1293)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 821 (1293)
.+..++..+......+...+.+.|+++|+++||+|+.++.+.+++.+..+...+..........+......++..+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (694)
T TIGR03375 306 QRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVA 385 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555566667778889999999999999999999998888888877766665555444444433333332222
Q ss_pred HHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCC
Q 000774 822 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 901 (1293)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~ 901 (1293)
+++.+.+. +..+..+ .+.+..++.+...+..++..+...+..++....+.+|+.++++.++|.+.. .....
T Consensus 386 il~~g~~~-v~~g~ls-----~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~---~~~~~ 456 (694)
T TIGR03375 386 IVVVGVYL-ISDGELT-----MGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG---TRFLH 456 (694)
T ss_pred HHHHHHHH-HHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC
Confidence 22222222 2344444 455555666777788888999999999999999999999999877653211 11111
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
..+..+.|+++||+|+|++..+++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|.+||.|++++++.+
T Consensus 457 ~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~ 536 (694)
T TIGR03375 457 RPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPAD 536 (694)
T ss_pred CCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHH
Confidence 11234679999999999765557999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+|++|+||||+|.+|++||+|||.+..+ .++++++++++.++++++++++|+|+||.+++.|.+|||||||||+||||+
T Consensus 537 lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARal 616 (694)
T TIGR03375 537 LRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARAL 616 (694)
T ss_pred HHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999997754 689999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+++|+|||||||||+||+++++.+++.|.+..+++|+|+||||++++..||+|++|++|++++.|+|+||+++
T Consensus 617 l~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 617 LRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 9999999999999999999999999999998889999999999999999999999999999999999999864
No 27
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.2e-68 Score=673.72 Aligned_cols=543 Identities=22% Similarity=0.311 Sum_probs=439.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCch-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 591 LLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL-FY-NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSIL 668 (1293)
Q Consensus 591 ~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll 668 (1293)
.+++.++...+....++++....+.......... .+ ...+.++.++..++.++..++....+.+....++..++++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~ 109 (582)
T PRK11176 30 AGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMM 109 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555566666666554332111111 11 222334556677777888888888999999999999999999
Q ss_pred cCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 669 RAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTA 748 (1293)
Q Consensus 669 ~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 748 (1293)
+.|..+|++.+.|++++|+++|++.+...+...+..++..++.+++.++++++++|.+.++++..+++.+++...+.+..
T Consensus 110 ~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~ 189 (582)
T PRK11176 110 GMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRF 189 (582)
T ss_pred cCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888888888888888888888888888877666555555555555555555
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 749 REVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATF 828 (1293)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1293)
++..+......+...+.+.|.++|++++|+|+.++.+.+++.+..+...+..........+......++..+...++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 269 (582)
T PRK11176 190 RNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYA 269 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556667788899999999999999999999999999888888877776666555555555555443333222222
Q ss_pred H--HHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCC
Q 000774 829 A--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSS 906 (1293)
Q Consensus 829 ~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~ 906 (1293)
. .+..+..+ .+.+..++++...+..++..+...+..++....+.+|+.++.+.+++.+.. ... ..+..
T Consensus 270 g~~~~~~g~is-----~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~~~--~~~~~ 339 (582)
T PRK11176 270 ASFPSVMDTLT-----AGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG---KRV--IERAK 339 (582)
T ss_pred HHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC---CcC--CCCCC
Confidence 1 12334444 455555666777788889999999999999999999999998766542211 011 11234
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
+.|+++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|++||.|+++++.+++|++|
T Consensus 340 ~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i 419 (582)
T PRK11176 340 GDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQV 419 (582)
T ss_pred CeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhc
Confidence 56999999999976545799999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEccccccccccHhhhcCCCC--CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 987 GIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 987 ~~v~Q~~~lf~~ti~~nl~~~~--~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||||+|.+|++||++||.+.. ..++++++++++.++++++++++|.|+||.+++.|.+||||||||++|||||+++|
T Consensus 420 ~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~ 499 (582)
T PRK11176 420 ALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDS 499 (582)
T ss_pred eEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998653 36899999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~ 1144 (1293)
+|||||||||+||+++++.+.+.|.+..+++|+|+||||++.+..||+|++|++|++++.|+|++++++ ++.|++++..
T Consensus 500 ~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~ 578 (582)
T PRK11176 500 PILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKM 578 (582)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHH
Confidence 999999999999999999999999998788999999999999999999999999999999999999976 4678877753
No 28
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-71 Score=691.83 Aligned_cols=485 Identities=22% Similarity=0.326 Sum_probs=352.1
Q ss_pred CcEEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 283 PAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
+.|+++|++++|+... +.++|+||||+|++||++||+|+||||||||+++|+|+++|++|....
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 4699999999996322 347999999999999999999999999999999999999998874321
Q ss_pred ----------ec-CcEEEEcCCc--ccc-CccHHHHHccCC----CCCH----HHHHHHHHHcCChhHHhcCCCCCcccc
Q 000774 347 ----------IR-GTVAYVPQVS--WIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEI 404 (1293)
Q Consensus 347 ----------~~-~~i~~v~Q~~--~l~-~~Tv~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~i 404 (1293)
.+ ..||||+|+| .++ ..||.|||.++. ..+. +++.++++..++.+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~~ 162 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTIL 162 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhHH
Confidence 11 3699999998 465 479999998752 1122 234455666665321 0112
Q ss_pred cCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEE
Q 000774 405 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILV 482 (1293)
Q Consensus 405 g~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l 482 (1293)
.....+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.+.+...+ |+|+|+|||+++++. .||||++|
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl 242 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 242 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEe
Confidence 3445689999999999999999999999999999999999999998865554333 899999999999986 48999999
Q ss_pred eCCeEEEecChHHHhhccH-HHH-HHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccch
Q 000774 483 HEGMVKEEGTFEDLSNNGE-LFQ-KLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLI 560 (1293)
Q Consensus 483 ~~G~i~~~g~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (1293)
++|++++.|+++++..... .|. .+... .|...
T Consensus 243 ~~G~i~~~g~~~~~~~~~~~~~~~~l~~~--------------------------------~~~~~-------------- 276 (623)
T PRK10261 243 YQGEAVETGSVEQIFHAPQHPYTRALLAA--------------------------------VPQLG-------------- 276 (623)
T ss_pred eCCeecccCCHHHhhcCCCChhhhhhhhc--------------------------------cCccc--------------
Confidence 9999999999877643210 000 00000 00000
Q ss_pred hhhhhhcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHH
Q 000774 561 KQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLV 640 (1293)
Q Consensus 561 ~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 640 (1293)
.+...
T Consensus 277 --------------------------------------------------~~~~~------------------------- 281 (623)
T PRK10261 277 --------------------------------------------------AMKGL------------------------- 281 (623)
T ss_pred --------------------------------------------------ccccc-------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 641 TLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIG 720 (1293)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (1293)
..+ +. .
T Consensus 282 ----------------------------~~~---------~~----~--------------------------------- 287 (623)
T PRK10261 282 ----------------------------DYP---------RR----F--------------------------------- 287 (623)
T ss_pred ----------------------------cCC---------cc----c---------------------------------
Confidence 000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 000774 721 IVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYT 800 (1293)
Q Consensus 721 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~ 800 (1293)
+.
T Consensus 288 ----------------------------------------~~-------------------------------------- 289 (623)
T PRK10261 288 ----------------------------------------PL-------------------------------------- 289 (623)
T ss_pred ----------------------------------------cc--------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 801 LVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERV 880 (1293)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl 880 (1293)
.. ...++.
T Consensus 290 -----------------------------------~~-------------------------------------~~~~~~ 297 (623)
T PRK10261 290 -----------------------------------IS-------------------------------------LEHPAK 297 (623)
T ss_pred -----------------------------------cc-------------------------------------cccccc
Confidence 00 000000
Q ss_pred hhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCC---------CCCceeeeeEEecCCCEEEEEcCCCCCHHH
Q 000774 881 GNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE---------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSS 951 (1293)
Q Consensus 881 ~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~---------~~~~l~~vsl~i~~Ge~v~ivG~~GsGKST 951 (1293)
. . +.... .. .. +....++++|+++.|+.. ..++|+||||+|++||++||+|+|||||||
T Consensus 298 ~---~-~~~~~----~~-~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKST 365 (623)
T PRK10261 298 Q---E-PPIEQ----DT-VV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKST 365 (623)
T ss_pred c---C-ccccc----cc-cc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHH
Confidence 0 0 00000 00 00 011248999999999621 135899999999999999999999999999
Q ss_pred HHHHHhcCCCCCcceEEECCeecCCCChH---HHhhhceEEcccc--cccc-ccHhhhcCCC---CCC-CHHHHHHHHHH
Q 000774 952 MLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKILGIIPQSP--VLFS-GTVRFNLDPF---SEH-SDADLWEALER 1021 (1293)
Q Consensus 952 ll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~r~~i~~v~Q~~--~lf~-~ti~~nl~~~---~~~-~~~~~~~~l~~ 1021 (1293)
|+++|+|+++|++|+|.++|.++...+.. .+|++|+||||++ .++. .|+.+|+... ... ...+. .
T Consensus 366 Llk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~ 440 (623)
T PRK10261 366 TGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAA-----A 440 (623)
T ss_pred HHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHH-----H
Confidence 99999999999999999999999876643 3567899999998 4665 4999998531 111 11111 1
Q ss_pred hhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEE
Q 000774 1022 AHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTML 1098 (1293)
Q Consensus 1022 ~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi 1098 (1293)
..+.+.++.+ |++ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ +.|||
T Consensus 441 ~~~~~~L~~~--gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi 518 (623)
T PRK10261 441 ARVAWLLERV--GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYL 518 (623)
T ss_pred HHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEE
Confidence 1233444443 453 345666788999999999999999999999999999999999999999999988653 68999
Q ss_pred EEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHH
Q 000774 1099 IIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1099 ~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 1139 (1293)
+||||++.+.. ||||++|++|+|++.|+++++.......|.
T Consensus 519 ~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~ 560 (623)
T PRK10261 519 FISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYT 560 (623)
T ss_pred EEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHH
Confidence 99999999877 999999999999999999999865444454
No 29
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.1e-69 Score=686.15 Aligned_cols=492 Identities=21% Similarity=0.280 Sum_probs=421.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHH
Q 000774 13 YAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTL 91 (1293)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~ 91 (1293)
++++++++.++..++.....+...+++.++...++..+|+|++++|..++++.++|+++++++ |++.+++++ ..+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~ 256 (686)
T TIGR03797 178 IALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTT 256 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHH
Confidence 344444455556666766777778899999999999999999999999999999999999997 799998865 334444
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000774 92 WSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSF 171 (1293)
Q Consensus 92 ~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~ 171 (1293)
+...+.++++++++++..+++++++++++++++++..++.++.++..++.++..+++.+.+.|.++|+++||.++.|+.+
T Consensus 257 ~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 336 (686)
T TIGR03797 257 LLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRA 336 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHH
Confidence 54555556677777888888888888887777778888888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 172 QSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMIT 249 (1293)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~ 249 (1293)
.+++++..++..+...+......+...+...+.. .+.++++|++.+..|.+|.|.++++..++..+..|+..++..+.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~ 416 (686)
T TIGR03797 337 FARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLI 416 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888777766666665555544444332 23455678888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHH
Q 000774 250 QVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSL 329 (1293)
Q Consensus 250 ~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTL 329 (1293)
.++++..+++|+.++++.+++..............|+++||+|+|++ .++++|+|+||+|++||++||||+||||||||
T Consensus 417 ~~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~I~~~nvsf~Y~~-~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL 495 (686)
T TIGR03797 417 SILAVIPLWERAKPILEALPEVDEAKTDPGKLSGAIEVDRVTFRYRP-DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTL 495 (686)
T ss_pred HHHHHHHHHHHHHHHhcCCcccccCcCCCCCCCceEEEEEEEEEcCC-CCccceeeeEEEECCCCEEEEECCCCCCHHHH
Confidence 99999999999999998765432111111112246999999999974 35789999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCC
Q 000774 330 ISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLP 397 (1293)
Q Consensus 330 l~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~ 397 (1293)
+++|+|+++|++|... .+|+.||||||+|++|++||+|||.++++.++++++++++.++++++++.+|
T Consensus 496 lklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp 575 (686)
T TIGR03797 496 LRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMP 575 (686)
T ss_pred HHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhcc
Confidence 9999999999998432 1356799999999999999999999998888899999999999999999999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCC
Q 000774 398 GGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVD 477 (1293)
Q Consensus 398 ~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d 477 (1293)
+|++|.+||+|.+|||||||||+|||||+++|++||||||||+||+++++.+.+.+.+. ++|+|+||||++.++.||
T Consensus 576 ~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~~i~~~D 652 (686)
T TIGR03797 576 MGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLSTIRNAD 652 (686)
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999876543 589999999999999999
Q ss_pred eEEEEeCCeEEEecChHHHhhccHHHHHHHHH
Q 000774 478 RIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 509 (1293)
Q Consensus 478 ~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 509 (1293)
+|++|++|++++.|+|+++++.++.|++++..
T Consensus 653 ~Iivl~~G~iv~~G~~~~Ll~~~~~y~~l~~~ 684 (686)
T TIGR03797 653 RIYVLDAGRVVQQGTYDELMAREGLFAQLARR 684 (686)
T ss_pred EEEEEECCEEEEECCHHHHHhCCcHHHHHHHh
Confidence 99999999999999999999999999988764
No 30
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-68 Score=623.56 Aligned_cols=506 Identities=25% Similarity=0.334 Sum_probs=428.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHH
Q 000774 626 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMF 705 (1293)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~ 705 (1293)
+...+.++.++..++.+.+.......+.++...+|..+++++.+++..+-+..++|++.+.++..++.++.++..++...
T Consensus 42 ~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~ 121 (559)
T COG4988 42 LLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQM 121 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666778888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHH
Q 000774 706 MGQVSQLLSTFVLIGIVSTMSLWA---IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY 782 (1293)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~ 782 (1293)
+...+..+..++.+++.+|...++ .+|++++++.+ .....+...+..-.....+.++|.|.++|+.|+|.|+..
T Consensus 122 ~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil---vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~ 198 (559)
T COG4988 122 FLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL---VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRT 198 (559)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhccc
Confidence 999888888888888888876554 44555544433 333344444445556678899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-CcccchhhhHHHHHHHHHHHHHHHHH
Q 000774 783 DRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVV--QN-GSAENQEAFASTMGLLLSYALNITSL 859 (1293)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~l~~~~~~~~~ 859 (1293)
+...++..+...+..+.++.........+..++++..+.+.+++.+..+ .. |..+ .+.+. +++..+.-++.|
T Consensus 199 ~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~lt---l~~~l--~~LiLAPEff~P 273 (559)
T COG4988 199 EATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLT---LFAGL--FVLILAPEFFQP 273 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc---HHHHH--HHHHHhHHHHHH
Confidence 9999999998888888888888888888888999888777776666543 22 2222 22222 233345567778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEE
Q 000774 860 LTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKV 939 (1293)
Q Consensus 860 ~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v 939 (1293)
+..+...+....+...+.+.+..+.+.|.+.+...+. ....+.....++++|++++|+++. ++++|+||++++|+++
T Consensus 274 lR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~--~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~t 350 (559)
T COG4988 274 LRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEK--AEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLT 350 (559)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccc--cccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEE
Confidence 8888888888888888889999888876654322111 111122233466679999998654 7999999999999999
Q ss_pred EEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCCC-CCHHHHHHH
Q 000774 940 GIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEA 1018 (1293)
Q Consensus 940 ~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~ 1018 (1293)
||||+||||||||+++|+|+++|++|+|.+||++++++++..+|+++++|||+|++|++|+||||.+++. .+|+++.++
T Consensus 351 alvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~a 430 (559)
T COG4988 351 ALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAA 430 (559)
T ss_pred EEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998765 689999999
Q ss_pred HHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEE
Q 000774 1019 LERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTML 1098 (1293)
Q Consensus 1019 l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi 1098 (1293)
++.+++.++++. |+|+|+.++++|.+|||||+|||+|||||+++++++|+||||++||.+|++.|.+.|.+..+++|||
T Consensus 431 l~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl 509 (559)
T COG4988 431 LDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVL 509 (559)
T ss_pred HHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEE
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHh
Q 000774 1099 IIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1099 ~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~ 1144 (1293)
+||||++.+.+||+|+||++|++++.|+|++|.++ .+.|++|+..
T Consensus 510 ~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~ 554 (559)
T COG4988 510 VITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQ 554 (559)
T ss_pred EEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHH
Confidence 99999999999999999999999999999999875 5678888765
No 31
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-68 Score=710.49 Aligned_cols=307 Identities=18% Similarity=0.271 Sum_probs=225.2
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
..|+++|++++|++...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+ +....|++|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~I 2014 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQNM 2014 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhhE
Confidence 4599999999997533469999999999999999999999999999999999999999999999999865 456678899
Q ss_pred eEEccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|||||++.++.. |++|||.++. ....+++.+. ..+.++. .|++...+.....|||||||||+|||||+.
T Consensus 2015 Gy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~--lgL~~~~dk~~~~LSGGqKqRLslA~ALi~ 2087 (2272)
T TIGR01257 2015 GYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQS--LGLSLYADRLAGTYSGGNKRKLSTAIALIG 2087 (2272)
T ss_pred EEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHH--cCCHHHhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999998865 9999996532 1222222211 2233333 255555666677899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHHH
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1140 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 1140 (1293)
+|+||+|||||+|||+.+++.+++.|++.. +++|||++||++++++. ||||++|++|++++.|++++++++.+..|.-
T Consensus 2088 ~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~g~g~~l 2167 (2272)
T TIGR01257 2088 CPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFGDGYIV 2167 (2272)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHhCCceEE
Confidence 999999999999999999999999999864 57999999999999987 9999999999999999999998766543321
Q ss_pred HHHhhccch-----HHHHHHhhccCcchhhhhhhhhcccccccchhhchhHHHHHHHHHHhhccccchhhhccccchhhH
Q 000774 1141 MVQSTGAAN-----AQYLRSLVLGGEAENKLREENKQIDGQRRWLASSRWAAAAQYALAVSLTSSHNDLQRLEVEDQNNI 1215 (1293)
Q Consensus 1141 l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1215 (1293)
.+....... ............+..... + .....+... +......+....
T Consensus 2168 ~i~~~~~~~~~~~~~~~v~~~i~~~fp~a~~~-e--~~~~~l~~~-----------------------i~~~~~~~if~~ 2221 (2272)
T TIGR01257 2168 TMKIKSPKDDLLPDLNPVEQFFQGNFPGSVQR-E--RHYNMLQFQ-----------------------VSSSSLARIFQL 2221 (2272)
T ss_pred EEEEcCcchhhhhHHHHHHHHHhhcCccceee-c--cccceEEEE-----------------------eCcccHHHHHHH
Confidence 000000000 000000000000000000 0 000000000 001134567788
Q ss_pred hhhchhhH-HHHHHhhccCCchhhHhhhccccc
Q 000774 1216 LKKTKDAV-VTLQGVLEGKHDKEIEESLNQHEV 1247 (1293)
Q Consensus 1216 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 1247 (1293)
||+.|..+ +..|++++++||+||++..++...
T Consensus 2222 L~~~k~~l~I~dysvsqtSLE~VFl~l~~~q~~ 2254 (2272)
T TIGR01257 2222 LISHKDSLLIEEYSVTQTTLDQVFVNFAKQQTE 2254 (2272)
T ss_pred HHhcCCCCCeEEEEcCCCCHHHHHHHHhccccc
Confidence 89888777 889999999999999999876543
No 32
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.3e-68 Score=683.10 Aligned_cols=490 Identities=22% Similarity=0.304 Sum_probs=423.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHH
Q 000774 13 YAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTL 91 (1293)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~ 91 (1293)
++++++++.++..++.....+...+++.++...++..+|+|++++|..++++.++|+++++++.| +.+++++ ..+..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~ 274 (710)
T TIGR03796 196 LLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATT 274 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHH
Confidence 33444445556666677777778889999999999999999999999999999999999999988 6788765 456666
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000774 92 WSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSF 171 (1293)
Q Consensus 92 ~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~ 171 (1293)
+...+.+++++++++...|+++++.++.+++.+.+..++.++..+..++.++..++..+.+.|.++|+++||.+++|+.+
T Consensus 275 ~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~ 354 (710)
T TIGR03796 275 ALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDF 354 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHH
Confidence 66777777777888888888888888888887778888888888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 172 QSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMIT 249 (1293)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~ 249 (1293)
.+++.+...+..+...+......+...+...+.. .+.++++|++.+..|.+|+|.++++..++..+..|+..++..+.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~ 434 (710)
T TIGR03796 355 FSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGG 434 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888887766666555555444444332 23456778888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCCC------CCC--CCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcC
Q 000774 250 QVVNANVSLKRMEEFLLAEEKILLPN------PPL--TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGG 321 (1293)
Q Consensus 250 ~~~~~~~s~~Ri~~~l~~~~~~~~~~------~~~--~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~ 321 (1293)
.++++..+++|+.++++.+++..... ... ......|+++||+|+|++ .++++|+|+||+|++||++||||+
T Consensus 435 ~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~-~~~~vL~~isl~i~~Ge~vaIvG~ 513 (710)
T TIGR03796 435 TLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSP-LEPPLIENFSLTLQPGQRVALVGG 513 (710)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCC-CCCCcccceeEEEcCCCEEEEECC
Confidence 99999999999999998765432111 001 111346999999999974 357899999999999999999999
Q ss_pred CCCcHHHHHHHHhcCCCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCC-CCCHHHHHHHHHHcC
Q 000774 322 TGEGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGS-AFEPARYEKAIDVTS 388 (1293)
Q Consensus 322 ~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~-~~~~~~~~~~~~~~~ 388 (1293)
||||||||+++|+|+++|++|.... +|+.||||||+|++|++||+|||.++. +.++++++++++.++
T Consensus 514 sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~ 593 (710)
T TIGR03796 514 SGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAA 593 (710)
T ss_pred CCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhC
Confidence 9999999999999999999984321 366899999999999999999999886 478899999999999
Q ss_pred ChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEec
Q 000774 389 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTN 468 (1293)
Q Consensus 389 l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH 468 (1293)
++++++.+|+|++|.+||+|.+|||||||||+|||||+++|+|||||||||+||+++++.+.+.+.+ .++|+|+|||
T Consensus 594 l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitH 670 (710)
T TIGR03796 594 IHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAH 670 (710)
T ss_pred CHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999987754 4799999999
Q ss_pred CcchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHH
Q 000774 469 QLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLM 507 (1293)
Q Consensus 469 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 507 (1293)
|++.+..||+|++|++|++++.|+|+++++.++.|++++
T Consensus 671 rl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 671 RLSTIRDCDEIIVLERGKVVQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred CHHHHHhCCEEEEEeCCEEEEecCHHHHHHcCCcHHHHh
Confidence 999999999999999999999999999999888888775
No 33
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-70 Score=674.82 Aligned_cols=449 Identities=20% Similarity=0.306 Sum_probs=340.8
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCC--CCCCcee-------------ec
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP--VSDASAV-------------IR 348 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~--~~g~~~~-------------~~ 348 (1293)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|.... .+
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 599999999996 35799999999999999999999999999999999999986 6774321 12
Q ss_pred CcEEEEcCCcccc-CccHHHHHccCCC------CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 349 GTVAYVPQVSWIF-NATVRDNILFGSA------FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~-~~Tv~eni~~g~~------~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
..+|||+|++.++ ..|++||+.++.. .+. +++.++++..++.+. ......+|||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGqkq 150 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDIN-----------PATPVGNLGLGQQQ 150 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCC-----------cccchhhCCHHHHH
Confidence 4599999999886 5699999988632 121 223334444443221 23345689999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
|++|||||+.+|++|||||||++||+.+..++++.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..|+.+++
T Consensus 151 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 151 LVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 9999999999999999999999999999999998766555568999999999999875 899999999999987654332
Q ss_pred hhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHH
Q 000774 497 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 576 (1293)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 576 (1293)
.... .
T Consensus 231 ~~~~-----~---------------------------------------------------------------------- 235 (506)
T PRK13549 231 TEDD-----I---------------------------------------------------------------------- 235 (506)
T ss_pred CHHH-----H----------------------------------------------------------------------
Confidence 1000 0
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 577 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 656 (1293)
Q Consensus 577 ~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 656 (1293)
..
T Consensus 236 --~~---------------------------------------------------------------------------- 237 (506)
T PRK13549 236 --IT---------------------------------------------------------------------------- 237 (506)
T ss_pred --HH----------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 657 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 736 (1293)
Q Consensus 657 ~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 736 (1293)
++
T Consensus 238 -----------------------------~~------------------------------------------------- 239 (506)
T PRK13549 238 -----------------------------MM------------------------------------------------- 239 (506)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 737 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 816 (1293)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1293)
+ +
T Consensus 240 -------~-----------------------------------~------------------------------------ 241 (506)
T PRK13549 240 -------V-----------------------------------G------------------------------------ 241 (506)
T ss_pred -------h-----------------------------------C------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCC
Q 000774 817 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 896 (1293)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~ 896 (1293)
... ... .+...
T Consensus 242 -----------------~~~--------------------------------------------~~~--~~~~~------ 252 (506)
T PRK13549 242 -----------------REL--------------------------------------------TAL--YPREP------ 252 (506)
T ss_pred -----------------cCc--------------------------------------------ccc--ccccc------
Confidence 000 000 00000
Q ss_pred CCCCCCCCCCccEEEEEEEEEecC-CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-CCcceEEECCeec
Q 000774 897 NRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-LERGRILIDGFDI 974 (1293)
Q Consensus 897 ~~~~~~~~~~g~i~~~~v~~~y~~-~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-p~~G~I~i~g~~i 974 (1293)
+. +....|+++|++++|+. +..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++
T Consensus 253 --~~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~ 327 (506)
T PRK13549 253 --HT---IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPV 327 (506)
T ss_pred --cC---CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEEC
Confidence 00 01124899999999942 12369999999999999999999999999999999999999 5999999999998
Q ss_pred CCCCh-HHHhhhceEEcccc---cccc-ccHhhhcCCCC--CCCH-HHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCC
Q 000774 975 AKFGL-MDLRKILGIIPQSP---VLFS-GTVRFNLDPFS--EHSD-ADLWEALERAHLKDAIRRNSLGLD-AQVSEAGEN 1045 (1293)
Q Consensus 975 ~~~~~-~~~r~~i~~v~Q~~---~lf~-~ti~~nl~~~~--~~~~-~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~ 1045 (1293)
...+. ...++.++|+||++ .+|. .|+.+|+.+.. .... ..+........+.+.++.+ +++ ...+....+
T Consensus 328 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~ 405 (506)
T PRK13549 328 KIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRL--KVKTASPELAIAR 405 (506)
T ss_pred CCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhc--CccCCCccccccc
Confidence 65543 34566799999996 3564 59999996421 1100 0000001112344556654 443 235566788
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEee
Q 000774 1046 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1123 (1293)
Q Consensus 1046 LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 1123 (1293)
||||||||++|||||+.+|+||||||||++||+.+.+.+++.|+++. +++|||+||||++++.. |||+++|++|+++.
T Consensus 406 LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~ 485 (506)
T PRK13549 406 LSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKG 485 (506)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999864 47899999999999877 99999999999999
Q ss_pred ecChhhhh
Q 000774 1124 YDTPEELL 1131 (1293)
Q Consensus 1124 ~g~~~el~ 1131 (1293)
.|+++++.
T Consensus 486 ~~~~~~~~ 493 (506)
T PRK13549 486 DLINHNLT 493 (506)
T ss_pred EeccccCC
Confidence 99888763
No 34
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.1e-67 Score=672.78 Aligned_cols=560 Identities=22% Similarity=0.312 Sum_probs=444.8
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCC-Cch-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 572 FKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPL-FYNTIYSLLSFGQVLVTLANSYWLI 649 (1293)
Q Consensus 572 ~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~~~~~~~~~~ 649 (1293)
+..++++++.. ...+...+++.++..++....|.++...+|....... ... .+...+.++.++..++.+++.++..
T Consensus 127 ~~~~~~~~~~~--~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 127 FSWFIPAIIRY--RKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444322 2233445555566666677778888777765432221 111 1233444555667788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 650 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 729 (1293)
Q Consensus 650 ~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1293)
..+.+...+++.+++++++++|+.||++.++|++++|+ +|++.+++.+...+...+..+...+..++++++++|.+.++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 283 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGV 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 69999999887766666666666666677788888887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 730 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 809 (1293)
Q Consensus 730 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1293)
++..++++..+...+.+..++..+......+...+.+.|+++|+++||+++.++.+.+++.+..+...+..........+
T Consensus 284 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR01846 284 VIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNI 363 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555544444444444444444455667889999999999999999999999888888887777666665555555
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 000774 810 LAIRLEIVGGLMIWLTATF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 887 (1293)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~ 887 (1293)
......++..+...++.++ ..+..+..+ .+.+..+..+...+..++..+......++....+.+|+.++++.+
T Consensus 364 ~~~~~~~i~~~~~~~il~~g~~lv~~g~it-----~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~ 438 (694)
T TIGR01846 364 AGQAIELIQKLTFAILLWFGAHLVIGGALS-----PGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSP 438 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5444444433222222211 112344444 444555666777788889999999999999999999999999877
Q ss_pred CCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceE
Q 000774 888 SEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRI 967 (1293)
Q Consensus 888 ~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I 967 (1293)
+|.... ...+. ....+.|+++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|
T Consensus 439 ~e~~~~--~~~~~--~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I 514 (694)
T TIGR01846 439 TEPRSA--GLAAL--PELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV 514 (694)
T ss_pred CCccCC--CCCCC--CCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 653211 10011 12246799999999997655579999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCC
Q 000774 968 LIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1046 (1293)
Q Consensus 968 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~L 1046 (1293)
.+||.|+++++..++|++|+||||++.+|++|++|||.... +.++++++++++.++++++++++|.|+||.+++.|.+|
T Consensus 515 ~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~L 594 (694)
T TIGR01846 515 LVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANL 594 (694)
T ss_pred EECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCC
Confidence 99999999999999999999999999999999999998754 46789999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecC
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~ 1126 (1293)
|||||||++|||||+++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.|+
T Consensus 595 SgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~ 674 (694)
T TIGR01846 595 SGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGR 674 (694)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999878899999999999999999999999999999999
Q ss_pred hhhhhhcCCChHHHHHHh
Q 000774 1127 PEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1127 ~~el~~~~~~~~~~l~~~ 1144 (1293)
|+|++++ ++.|++++..
T Consensus 675 ~~~l~~~-~~~y~~l~~~ 691 (694)
T TIGR01846 675 HEELLAL-QGLYARLWQQ 691 (694)
T ss_pred HHHHHHc-CChHHHHHHh
Confidence 9999975 4778887754
No 35
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5e-70 Score=675.90 Aligned_cols=454 Identities=23% Similarity=0.382 Sum_probs=344.0
Q ss_pred cEEEEeeEEEcCCC-CCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCC-----CCCCcee-----------
Q 000774 284 AISIRNGYFSWDSK-AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-----VSDASAV----------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~-~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~-----~~g~~~~----------- 346 (1293)
.++++|++++|+.+ .++++|+|+||+|++||++||+||||||||||+++|+|+++| ++|....
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999631 135799999999999999999999999999999999999986 5774211
Q ss_pred ----ec-CcEEEEcCCcc--cc-CccHHHHHccCC----CCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCC
Q 000774 347 ----IR-GTVAYVPQVSW--IF-NATVRDNILFGS----AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVN 410 (1293)
Q Consensus 347 ----~~-~~i~~v~Q~~~--l~-~~Tv~eni~~g~----~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~ 410 (1293)
.+ ..|||++|++. ++ ..|+.+|+.++. ..+ .+++.++++..++.+... .......+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~--------~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAK--------RLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhhCCcc
Confidence 11 36999999985 43 469999986421 111 134455666666643111 11234468
Q ss_pred CChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEEeCCeEE
Q 000774 411 ISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVK 488 (1293)
Q Consensus 411 LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~ 488 (1293)
|||||||||+|||||+.+|++|||||||++||+.+.+++.+.+.+...+ |+|+|+|||+++.+. .||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999866554443 899999999999986 48999999999999
Q ss_pred EecChHHHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcC
Q 000774 489 EEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETG 568 (1293)
Q Consensus 489 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 568 (1293)
+.|+++++......
T Consensus 237 ~~g~~~~~~~~~~~------------------------------------------------------------------ 250 (529)
T PRK15134 237 EQNRAATLFSAPTH------------------------------------------------------------------ 250 (529)
T ss_pred EeCCHHHHhhCCCC------------------------------------------------------------------
Confidence 98877654311000
Q ss_pred cccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 569 VVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWL 648 (1293)
Q Consensus 569 ~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 648 (1293)
.+.+
T Consensus 251 --------~~~~-------------------------------------------------------------------- 254 (529)
T PRK15134 251 --------PYTQ-------------------------------------------------------------------- 254 (529)
T ss_pred --------HHHH--------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 649 IISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLW 728 (1293)
Q Consensus 649 ~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1293)
.
T Consensus 255 -----------------------------------------------~-------------------------------- 255 (529)
T PRK15134 255 -----------------------------------------------K-------------------------------- 255 (529)
T ss_pred -----------------------------------------------H--------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 729 AIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANR 808 (1293)
Q Consensus 729 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1293)
++. . .
T Consensus 256 --------------~~~----------~---~------------------------------------------------ 260 (529)
T PRK15134 256 --------------LLN----------S---E------------------------------------------------ 260 (529)
T ss_pred --------------HHH----------h---C------------------------------------------------
Confidence 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 000774 809 WLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 888 (1293)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~ 888 (1293)
.+. . +
T Consensus 261 ---------------------------------------------------------------------~~~----~-~- 265 (529)
T PRK15134 261 ---------------------------------------------------------------------PSG----D-P- 265 (529)
T ss_pred ---------------------------------------------------------------------ccc----c-c-
Confidence 000 0 0
Q ss_pred CCccccCCCCCCCCCCCCccEEEEEEEEEecC---------CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcC
Q 000774 889 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI 959 (1293)
Q Consensus 889 e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~---------~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~ 959 (1293)
... +. +....++++|++++|+. +..++|+|+||+|++||++||+||||||||||+++|+|+
T Consensus 266 ~~~-------~~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl 335 (529)
T PRK15134 266 VPL-------PE---PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRL 335 (529)
T ss_pred ccc-------CC---CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCc
Confidence 000 00 00113899999999952 123699999999999999999999999999999999999
Q ss_pred CCCCcceEEECCeecCCCChHH---HhhhceEEcccc--cccc-ccHhhhcCCCC----C-CCHHHHHHHHHHhhHHHHH
Q 000774 960 VELERGRILIDGFDIAKFGLMD---LRKILGIIPQSP--VLFS-GTVRFNLDPFS----E-HSDADLWEALERAHLKDAI 1028 (1293)
Q Consensus 960 ~~p~~G~I~i~g~~i~~~~~~~---~r~~i~~v~Q~~--~lf~-~ti~~nl~~~~----~-~~~~~~~~~l~~~~l~~~i 1028 (1293)
+ |++|+|.++|.++...+... +|++++|+||++ .+|. .|+++|+.+.. . ....+. ...+.+++
T Consensus 336 ~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~l 409 (529)
T PRK15134 336 I-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAVM 409 (529)
T ss_pred C-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHHH
Confidence 8 58999999999987765443 467899999998 3665 49999986311 0 111111 11233445
Q ss_pred HHccCCcc-hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcc
Q 000774 1029 RRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLN 1105 (1293)
Q Consensus 1029 ~~lp~gl~-~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~ 1105 (1293)
+.+ |+. ........+||||||||++|||||+.+|++|||||||++||+.+.+.+++.|+++.+ ++|||+||||++
T Consensus 410 ~~~--~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~ 487 (529)
T PRK15134 410 EEV--GLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH 487 (529)
T ss_pred HHc--CCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH
Confidence 543 554 345667788999999999999999999999999999999999999999999998753 789999999999
Q ss_pred hhhc-cCEEEEEeCCeEeeecChhhhhhcC
Q 000774 1106 TIID-CDRILLLDSGRVLEYDTPEELLSNE 1134 (1293)
Q Consensus 1106 ~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 1134 (1293)
.+.. ||||++|++|++++.|+++++.+..
T Consensus 488 ~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 517 (529)
T PRK15134 488 VVRALCHQVIVLRQGEVVEQGDCERVFAAP 517 (529)
T ss_pred HHHHhcCeEEEEECCEEEEEcCHHHHhcCC
Confidence 9876 9999999999999999999997543
No 36
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.2e-67 Score=659.88 Aligned_cols=547 Identities=23% Similarity=0.355 Sum_probs=452.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 586 WVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 663 (1293)
Q Consensus 586 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 663 (1293)
+.+++.+++.++...+....++++....+........... +..++.++.++..++.+++.++....+.+....++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l 93 (571)
T TIGR02203 14 AGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRM 93 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666667777777777776665543221111111 23345566677788889999999999999999999999
Q ss_pred HHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 664 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 743 (1293)
Q Consensus 664 ~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 743 (1293)
++++++.|..+|++.+.|++++|+++|++.++..+...+..++..++.++..++++++++|.+.+++++++++.+.+...
T Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~ 173 (571)
T TIGR02203 94 FEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRR 173 (571)
T ss_pred HHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888888899999999999998887777766666666666
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 744 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW 823 (1293)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1293)
+.+..++..+......++..+.+.|.++|+.++|+++.++++.+++.+..+...+..........+......++..+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (571)
T TIGR02203 174 VSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALA 253 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666777778889999999999999999999999988888888877776666555555555444444332222
Q ss_pred HHHHH--HHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCC
Q 000774 824 LTATF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 901 (1293)
Q Consensus 824 ~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~ 901 (1293)
++.++ ..+..+..+ .+.+..+..+...+..++..+......+.....+.+|+.++++.+++.+.. ..+.
T Consensus 254 ~~~~~g~~~~~~g~lt-----~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~- 324 (571)
T TIGR02203 254 VVLFIALFQAQAGSLT-----AGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAI- 324 (571)
T ss_pred HHHHHHHHHHHcCCCC-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCC-
Confidence 22111 123344444 555666667777888899999999999999999999999998765543211 1111
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
.+..+.|+++||+|+|++..+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||+|+++++.++
T Consensus 325 -~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~ 403 (571)
T TIGR02203 325 -ERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLAS 403 (571)
T ss_pred -CCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHH
Confidence 1234569999999999764457999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEccccccccccHhhhcCCCC--CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~--~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
+|++|+||||+|.+|++|++|||..+. +.++++++++++.+++++++.++|+|+||.+++.|.+||||||||++||||
T Consensus 404 ~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARa 483 (571)
T TIGR02203 404 LRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARA 483 (571)
T ss_pred HHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHH
Confidence 999999999999999999999998774 478999999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHH
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 1139 (1293)
++++|+|||||||||+||+++++.|.+.|++..+++|+|+||||.+.+..||+|++|++|++++.|+|++++++ .+.|.
T Consensus 484 ll~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~ 562 (571)
T TIGR02203 484 LLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYA 562 (571)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHH
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999875 45666
Q ss_pred HHHH
Q 000774 1140 KMVQ 1143 (1293)
Q Consensus 1140 ~l~~ 1143 (1293)
+++.
T Consensus 563 ~~~~ 566 (571)
T TIGR02203 563 QLHN 566 (571)
T ss_pred HHHH
Confidence 5544
No 37
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.9e-68 Score=676.18 Aligned_cols=483 Identities=21% Similarity=0.299 Sum_probs=409.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000774 21 VVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRII 99 (1293)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i 99 (1293)
.++..++.....+.....+.++...+|..+|+++++.+..++++.++|++++++++|++.+++.+ ..+..++...+.++
T Consensus 211 ~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i 290 (711)
T TIGR00958 211 SIASSVSAGLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLL 290 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444455566788888999999999999999999999999999999999999999865 45666677777777
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHH
Q 000774 100 ISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVR 179 (1293)
Q Consensus 100 ~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~ 179 (1293)
+++++++...+.++++.++.+++.+.+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+..
T Consensus 291 ~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~ 370 (711)
T TIGR00958 291 GLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEAL 370 (711)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHH
Confidence 77788888888888888777777777888888888888999999999999999999999999999999999988888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 180 NDELSWFRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVS 257 (1293)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s 257 (1293)
++..+...+..........+...+. ..+.++.+|++.+..|.+++|.+++++.+...+..|+..++..+..+.++..+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a 450 (711)
T TIGR00958 371 EETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGA 450 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766665554444443333333222 22344567888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccCCCCCC-CCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcC
Q 000774 258 LKRMEEFLLAEEKILLPNPPL-TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGE 336 (1293)
Q Consensus 258 ~~Ri~~~l~~~~~~~~~~~~~-~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~ 336 (1293)
++|+.++++.+++........ .+....|+++||+|+|++.+++++|+|+||+|++||+++||||||||||||+++|+|+
T Consensus 451 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl 530 (711)
T TIGR00958 451 SEKVFEYLDRKPNIPLTGTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNL 530 (711)
T ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhc
Confidence 999999998765432111111 1123469999999999854457899999999999999999999999999999999999
Q ss_pred CCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCccc
Q 000774 337 LPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTE 403 (1293)
Q Consensus 337 ~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ 403 (1293)
++|++|.... ++++|+||||+|++|++||+|||.+|.+ .++++++++++.++++++++.+|+|++|.
T Consensus 531 ~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ 610 (711)
T TIGR00958 531 YQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTE 610 (711)
T ss_pred cCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCc
Confidence 9999984321 3457999999999999999999999964 67889999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEe
Q 000774 404 IGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVH 483 (1293)
Q Consensus 404 ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~ 483 (1293)
+||+|.+||||||||++||||++++|+|||||||||+||+++++.+.+ . ...+++|+|+||||++.++.||+|++|+
T Consensus 611 ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~--~~~~~~TvIiItHrl~~i~~aD~IivL~ 687 (711)
T TIGR00958 611 VGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-S--RSRASRTVLLIAHRLSTVERADQILVLK 687 (711)
T ss_pred ccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-h--hccCCCeEEEEeccHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 2 2346899999999999999999999999
Q ss_pred CCeEEEecChHHHhhccHHHHHH
Q 000774 484 EGMVKEEGTFEDLSNNGELFQKL 506 (1293)
Q Consensus 484 ~G~i~~~g~~~~l~~~~~~~~~~ 506 (1293)
+|+|+++|+|+||+++++.|+++
T Consensus 688 ~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 688 KGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred CCEEEEeeCHHHHHhCCCchHhc
Confidence 99999999999999988888765
No 38
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-69 Score=669.93 Aligned_cols=447 Identities=23% Similarity=0.341 Sum_probs=338.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.|+++|++++|+ ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|.... .+..
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 589999999996 357999999999999999999999999999999999999999884321 1235
Q ss_pred EEEEcCCcccc-CccHHHHHccCCC-------C---CH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGSA-------F---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~~-------~---~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
|+|++|++.++ ..||+||+.++.. . +. +++.+.++..++.+. ......+|||||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~ 150 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-----------LDEKVANLSISH 150 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-----------cccchhhCCHHH
Confidence 99999999886 5699999987531 0 11 223344444444322 233446899999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||++|||||+.+|++|||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..|+++
T Consensus 151 ~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (510)
T PRK09700 151 KQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVS 230 (510)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchh
Confidence 999999999999999999999999999999999998766555568999999999999874 8999999999999887665
Q ss_pred HHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHH
Q 000774 495 DLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKV 574 (1293)
Q Consensus 495 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 574 (1293)
++.... ....
T Consensus 231 ~~~~~~-----~~~~----------------------------------------------------------------- 240 (510)
T PRK09700 231 DVSNDD-----IVRL----------------------------------------------------------------- 240 (510)
T ss_pred hCCHHH-----HHHH-----------------------------------------------------------------
Confidence 432100 0000
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 575 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLY 654 (1293)
Q Consensus 575 ~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 654 (1293)
T Consensus 241 -------------------------------------------------------------------------------- 240 (510)
T PRK09700 241 -------------------------------------------------------------------------------- 240 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 655 AAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLL 734 (1293)
Q Consensus 655 ~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1293)
+ + |
T Consensus 241 ------------~-------~-----~----------------------------------------------------- 243 (510)
T PRK09700 241 ------------M-------V-----G----------------------------------------------------- 243 (510)
T ss_pred ------------h-------c-----C-----------------------------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 735 LLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL 814 (1293)
Q Consensus 735 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1293)
+ .
T Consensus 244 ------------------------~-~----------------------------------------------------- 245 (510)
T PRK09700 244 ------------------------R-E----------------------------------------------------- 245 (510)
T ss_pred ------------------------C-C-----------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcccc
Q 000774 815 EIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVI 894 (1293)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~ 894 (1293)
.. .+ .....+..
T Consensus 246 ---------------------~~----------------------------------------~~---~~~~~~~~---- 257 (510)
T PRK09700 246 ---------------------LQ----------------------------------------NR---FNAMKENV---- 257 (510)
T ss_pred ---------------------cc----------------------------------------cc---cccccccc----
Confidence 00 00 00000000
Q ss_pred CCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeec
Q 000774 895 ESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDI 974 (1293)
Q Consensus 895 ~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i 974 (1293)
. ++ +....++++|+++.|+ .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++
T Consensus 258 --~-~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~ 327 (510)
T PRK09700 258 --S-NL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDI 327 (510)
T ss_pred --c-cC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEEC
Confidence 0 00 0112489999998763 389999999999999999999999999999999999999999999999998
Q ss_pred CCCCh-HHHhhhceEEcccc---ccccc-cHhhhcCCCCCCC----HH--HH-HHHHHHhhHHHHHHHccCCcc-hhhhc
Q 000774 975 AKFGL-MDLRKILGIIPQSP---VLFSG-TVRFNLDPFSEHS----DA--DL-WEALERAHLKDAIRRNSLGLD-AQVSE 1041 (1293)
Q Consensus 975 ~~~~~-~~~r~~i~~v~Q~~---~lf~~-ti~~nl~~~~~~~----~~--~~-~~~l~~~~l~~~i~~lp~gl~-~~~~~ 1041 (1293)
...++ ..+|+.|||+||++ .+|.. |+++|+.+..... .. .. ........+.+.++.+ |+. .....
T Consensus 328 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~ 405 (510)
T PRK09700 328 SPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELL--ALKCHSVNQ 405 (510)
T ss_pred CCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhc--CCCCCCccC
Confidence 66544 34567899999984 56654 9999986421100 00 00 0000112234555554 453 34566
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCC
Q 000774 1042 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSG 1119 (1293)
Q Consensus 1042 ~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G 1119 (1293)
...+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+||||++.+.. |||+++|++|
T Consensus 406 ~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G 485 (510)
T PRK09700 406 NITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEG 485 (510)
T ss_pred ccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECC
Confidence 677899999999999999999999999999999999999999999999864 47899999999999876 9999999999
Q ss_pred eEeeecChhh
Q 000774 1120 RVLEYDTPEE 1129 (1293)
Q Consensus 1120 ~i~~~g~~~e 1129 (1293)
++++.+++.+
T Consensus 486 ~i~~~~~~~~ 495 (510)
T PRK09700 486 RLTQILTNRD 495 (510)
T ss_pred EEEEEecCcc
Confidence 9998876533
No 39
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=7e-70 Score=673.80 Aligned_cols=438 Identities=27% Similarity=0.438 Sum_probs=337.6
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCC--CCCCCCcee----------------
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL--PPVSDASAV---------------- 346 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~--~~~~g~~~~---------------- 346 (1293)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+. +|++|....
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 47899999995 357999999999999999999999999999999999997 688874321
Q ss_pred -----------------------------ecCcEEEEcCC-cccc-CccHHHHHccCC---CCCH----HHHHHHHHHcC
Q 000774 347 -----------------------------IRGTVAYVPQV-SWIF-NATVRDNILFGS---AFEP----ARYEKAIDVTS 388 (1293)
Q Consensus 347 -----------------------------~~~~i~~v~Q~-~~l~-~~Tv~eni~~g~---~~~~----~~~~~~~~~~~ 388 (1293)
.+..++|++|+ +.++ ..|++||+.++. ..+. +++.++++..+
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 12359999998 5666 469999998742 1221 34455666666
Q ss_pred ChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEe
Q 000774 389 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVT 467 (1293)
Q Consensus 389 l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vt 467 (1293)
+.+..+. ...+|||||||||+|||||+.+|++|||||||++||+.+.+++.+.+.+... .|+|||+||
T Consensus 158 l~~~~~~-----------~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivt 226 (520)
T TIGR03269 158 LSHRITH-----------IARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTS 226 (520)
T ss_pred Chhhhhc-----------CcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe
Confidence 6544332 3468999999999999999999999999999999999999999886655433 489999999
Q ss_pred cCcchhhh-CCeEEEEeCCeEEEecChHHHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCcc
Q 000774 468 NQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEA 546 (1293)
Q Consensus 468 H~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (1293)
|+++++.. ||+|++|++|+++..|+++++... .
T Consensus 227 Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------~---------------------------------------- 260 (520)
T TIGR03269 227 HWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------F---------------------------------------- 260 (520)
T ss_pred CCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH------H----------------------------------------
Confidence 99999864 899999999998877655432100 0
Q ss_pred ccccccccccccchhhhhhhcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHH
Q 000774 547 SDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFY 626 (1293)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 626 (1293)
..
T Consensus 261 --------------------------------~~---------------------------------------------- 262 (520)
T TIGR03269 261 --------------------------------ME---------------------------------------------- 262 (520)
T ss_pred --------------------------------Hh----------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHH
Q 000774 627 NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFM 706 (1293)
Q Consensus 627 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~ 706 (1293)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHH
Q 000774 707 GQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMA 786 (1293)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~ 786 (1293)
..
T Consensus 263 -------------------------------------------~~----------------------------------- 264 (520)
T TIGR03269 263 -------------------------------------------GV----------------------------------- 264 (520)
T ss_pred -------------------------------------------hc-----------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 787 DINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRL 866 (1293)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ 866 (1293)
T Consensus 265 -------------------------------------------------------------------------------- 264 (520)
T TIGR03269 265 -------------------------------------------------------------------------------- 264 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecC---CCCCceeeeeEEecCCCEEEEEc
Q 000774 867 ASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---ELPPVLHGLSFTIPPSDKVGIVG 943 (1293)
Q Consensus 867 ~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~---~~~~~l~~vsl~i~~Ge~v~ivG 943 (1293)
.+... +... +. ....++++|++++|++ +..++|+|+||+|++||++||+|
T Consensus 265 -----------~~~~~----~~~~--------~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G 317 (520)
T TIGR03269 265 -----------SEVEK----ECEV--------EV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVG 317 (520)
T ss_pred -----------hhhcc----cccc--------CC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEEC
Confidence 00000 0000 00 0124899999999952 22369999999999999999999
Q ss_pred CCCCCHHHHHHHHhcCCCCCcceEEEC-Cee---cCCCCh---HHHhhhceEEccccccccc-cHhhhcCCCC--CCCHH
Q 000774 944 RTGAGKSSMLNTLFRIVELERGRILID-GFD---IAKFGL---MDLRKILGIIPQSPVLFSG-TVRFNLDPFS--EHSDA 1013 (1293)
Q Consensus 944 ~~GsGKSTll~~l~g~~~p~~G~I~i~-g~~---i~~~~~---~~~r~~i~~v~Q~~~lf~~-ti~~nl~~~~--~~~~~ 1013 (1293)
|||||||||+++|+|+++|++|+|.++ |.+ +...++ ..+|++|+|+||++.+|.. |+++|+.... .....
T Consensus 318 ~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~ 397 (520)
T TIGR03269 318 TSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDE 397 (520)
T ss_pred CCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999995 643 333322 2456789999999988865 9999986311 11111
Q ss_pred HHHHHHHHhhHHHHHHHccCCcch-----hhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 000774 1014 DLWEALERAHLKDAIRRNSLGLDA-----QVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTI 1088 (1293)
Q Consensus 1014 ~~~~~l~~~~l~~~i~~lp~gl~~-----~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l 1088 (1293)
+ ....+.++++.+ |++. ..+....+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|
T Consensus 398 ~-----~~~~~~~~l~~~--~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l 470 (520)
T TIGR03269 398 L-----ARMKAVITLKMV--GFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSI 470 (520)
T ss_pred H-----HHHHHHHHHHhC--CCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 1 011233444443 3432 356667889999999999999999999999999999999999999999999
Q ss_pred HHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1089 REEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1089 ~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+++. .+.|||+|||+++.+.. |||+++|++|++++.|+++++.+
T Consensus 471 ~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 471 LKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 8864 37899999999999877 99999999999999999988764
No 40
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.4e-67 Score=676.60 Aligned_cols=489 Identities=22% Similarity=0.340 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000774 15 FSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWS 93 (1293)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~ 93 (1293)
++++++.++..++.....+...+++.++...++..+|+|++++|..++++.++|+++++++ |++.+.+++ ..+...+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~ 278 (708)
T TIGR01193 200 IGLIIAYIIQQILSYIQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFL 278 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHH
Confidence 3344455556666666667778899999999999999999999999999999999999998 899998865 34445555
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHH
Q 000774 94 APFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQS 173 (1293)
Q Consensus 94 ~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~ 173 (1293)
..+.++++++++++..++++++.++++++++.+..++.++.++..++.++..++..+.+.|.++|+++||.+|+|+.+.+
T Consensus 279 ~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~ 358 (708)
T TIGR01193 279 DMWILVIVGLFLVRQNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYS 358 (708)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHH
Confidence 55556666667777888888888888777777788888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 174 KVQNVRNDELSWFRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQV 251 (1293)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~ 251 (1293)
++++...+..+...+..........+...+. ..+.++++|++.+..|.+|+|.++++..+...+..|+..+...+..+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~ 438 (708)
T TIGR01193 359 KIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKL 438 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988877776665555444444433333322 23445678889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcccCCC--CCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHH
Q 000774 252 VNANVSLKRMEEFLLAEEKILLPN--PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSL 329 (1293)
Q Consensus 252 ~~~~~s~~Ri~~~l~~~~~~~~~~--~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTL 329 (1293)
++++.+++|+.++++.+++..... .........|+++||+|+|++ ++++|+|+||+|++||++||+|+||||||||
T Consensus 439 ~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTL 516 (708)
T TIGR01193 439 QAARVANNRLNEVYLVDSEFINKKKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTL 516 (708)
T ss_pred HHHHHHHHHHHHHHcCCCcccccccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHH
Confidence 999999999999998765432111 111122346999999999963 4689999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCC--CCCHHHHHHHHHHcCChhHHhc
Q 000774 330 ISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGS--AFEPARYEKAIDVTSLQHDLDL 395 (1293)
Q Consensus 330 l~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~--~~~~~~~~~~~~~~~l~~~~~~ 395 (1293)
+++|+|+++|++|... .+|+.||||||+|++|++||+|||.++. ..++++++++++.++++++++.
T Consensus 517 lklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~ 596 (708)
T TIGR01193 517 AKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIEN 596 (708)
T ss_pred HHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHh
Confidence 9999999999998432 1356799999999999999999999983 4678899999999999999999
Q ss_pred CCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh
Q 000774 396 LPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ 475 (1293)
Q Consensus 396 l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~ 475 (1293)
+|+|++|.+||+|.+|||||||||+||||++++|++||||||||+||+++++.+.+.+.+ . +++|+|+||||++.+..
T Consensus 597 lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~-~-~~~T~IiitHr~~~~~~ 674 (708)
T TIGR01193 597 MPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLN-L-QDKTIIFVAHRLSVAKQ 674 (708)
T ss_pred cccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHH-h-cCCEEEEEecchHHHHc
Confidence 999999999999999999999999999999999999999999999999999999987764 3 68999999999999999
Q ss_pred CCeEEEEeCCeEEEecChHHHhhccHHHHHHHH
Q 000774 476 VDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 508 (1293)
Q Consensus 476 ~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 508 (1293)
||+|++|++|++++.|+|+++++.++.|+++++
T Consensus 675 ~D~i~~l~~G~i~~~G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 675 SDKIIVLDHGKIIEQGSHDELLDRNGFYASLIH 707 (708)
T ss_pred CCEEEEEECCEEEEECCHHHHHhcCCcHHHHhh
Confidence 999999999999999999999998888988764
No 41
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.3e-67 Score=659.49 Aligned_cols=488 Identities=22% Similarity=0.268 Sum_probs=417.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000774 20 GVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRI 98 (1293)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~ 98 (1293)
+.++..++.....+...+++.++...+|..+|+++.+++..++.+.++|++++++++|++.+++.+ ..+..++..++.+
T Consensus 74 ~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK11176 74 LMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASI 153 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555566778888999999999999999999999999999999999999999999854 4566677777778
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Q 000774 99 IISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNV 178 (1293)
Q Consensus 99 i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~ 178 (1293)
+++++++++..++++++.++++++.+++..++.+++++..++.++..++..+.+.|.++|+++||.|+.|+.+.+++++.
T Consensus 154 ~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~ 233 (582)
T PRK11176 154 IGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKV 233 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHH
Confidence 78888888888888887777777777777788888888889999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 179 RNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANV 256 (1293)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~ 256 (1293)
.++..+...+..+...+...+...+.. .+.++++|++.+..|.+++|.++++.+++..+..|+..+...+..+..+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~ 313 (582)
T PRK11176 234 SNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMA 313 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777766665555544444444332 233456677778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcC
Q 000774 257 SLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGE 336 (1293)
Q Consensus 257 s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~ 336 (1293)
+++|+.++++.+++.........+....|+++|++|+|++ .++++|+|+||+|++||++||+|+||||||||+++|+|+
T Consensus 314 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~y~~-~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl 392 (582)
T PRK11176 314 ACQTLFAILDLEQEKDEGKRVIERAKGDIEFRNVTFTYPG-KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRF 392 (582)
T ss_pred HHHHHHHHhcCCCcCCCCCcCCCCCCCeEEEEEEEEecCC-CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhc
Confidence 9999999987654422111111122235999999999974 357899999999999999999999999999999999999
Q ss_pred CCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCC--CCHHHHHHHHHHcCChhHHhcCCCCCcc
Q 000774 337 LPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA--FEPARYEKAIDVTSLQHDLDLLPGGDVT 402 (1293)
Q Consensus 337 ~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~--~~~~~~~~~~~~~~l~~~~~~l~~g~~t 402 (1293)
++|++|.... +++.|+||||+|++|++||+|||.+|++ .++++++++++.+++.++++.+|+|++|
T Consensus 393 ~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt 472 (582)
T PRK11176 393 YDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDT 472 (582)
T ss_pred cCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCc
Confidence 9999984321 3467999999999999999999999853 6889999999999999999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEE
Q 000774 403 EIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILV 482 (1293)
Q Consensus 403 ~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l 482 (1293)
.+|++|.+||||||||++|||||+++|+|+|||||||+||+++++.+++.+.+ ..+++|+|+||||++.++.||+|++|
T Consensus 473 ~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l 551 (582)
T PRK11176 473 VIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDE-LQKNRTSLVIAHRLSTIEKADEILVV 551 (582)
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHH-HhCCCEEEEEecchHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999999886654 45689999999999999999999999
Q ss_pred eCCeEEEecChHHHhhccHHHHHHHHH
Q 000774 483 HEGMVKEEGTFEDLSNNGELFQKLMEN 509 (1293)
Q Consensus 483 ~~G~i~~~g~~~~l~~~~~~~~~~~~~ 509 (1293)
++|++++.|+|+++++.++.|++++..
T Consensus 552 ~~g~i~e~g~~~~l~~~~~~y~~l~~~ 578 (582)
T PRK11176 552 EDGEIVERGTHAELLAQNGVYAQLHKM 578 (582)
T ss_pred ECCEEEEeCCHHHHHhCCChHHHHHHH
Confidence 999999999999999999999998864
No 42
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-67 Score=601.36 Aligned_cols=542 Identities=23% Similarity=0.323 Sum_probs=408.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCC------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 589 LILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG------PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDA 662 (1293)
Q Consensus 589 ~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 662 (1293)
+..+++++.+..+.+..|..+...++........ +......|.+..++..+++.++.+.+.+...++-++...+
T Consensus 33 ~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~ 112 (591)
T KOG0057|consen 33 FPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSD 112 (591)
T ss_pred HHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445666777777776555443211111 2235567888889999999999999999999999999999
Q ss_pred HHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000774 663 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIV-STMSLWAIMPLLLLFYAAY 741 (1293)
Q Consensus 663 ~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 741 (1293)
.|.+++.+.+++|....+|.+.+.+..-...+...+...+..++..++.+......+.+- .+...++++.. +..|.++
T Consensus 113 vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~-v~~Y~a~ 191 (591)
T KOG0057|consen 113 VFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGT-VGAYAAF 191 (591)
T ss_pred HHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH-HHHhhee
Confidence 999999999999999999999998888888887777766666666655554444333332 22222222222 2223322
Q ss_pred HHH-HHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 742 LYY-QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL 820 (1293)
Q Consensus 742 ~~~-~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1293)
..+ .....+.++....+.....+...+++.+..+||+|+.|++..+++...+....+.......+...+.+....+..+
T Consensus 192 Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv 271 (591)
T KOG0057|consen 192 TIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSV 271 (591)
T ss_pred EEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHH
Confidence 221 2222233333344445556778899999999999999999999999999999888887776666666555554433
Q ss_pred HHHHHHHHHH--HhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCC
Q 000774 821 MIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNR 898 (1293)
Q Consensus 821 ~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~ 898 (1293)
.......+.. ..++..+ .+.+..+.++..++..++..+...+..+.+.+.-+..+....+.... ..+.
T Consensus 272 ~~~~im~l~~~gi~~~~mt-----vgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~---i~~~-- 341 (591)
T KOG0057|consen 272 ALTFIMVLGSNGIAAGKMT-----VGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDED---IQEA-- 341 (591)
T ss_pred HHHHHHHHHhhhhhhcccc-----ccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhh---hhhc--
Confidence 3322222222 1222222 22233344445555556665555555554444433333222111110 0010
Q ss_pred CCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC
Q 000774 899 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG 978 (1293)
Q Consensus 899 ~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~ 978 (1293)
+.+....++.|+|+||+|.|+++ +++|+++||+|++||+|||+|+|||||||++|+|+|+++ ++|+|+|||+|+++++
T Consensus 342 ~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~ 419 (591)
T KOG0057|consen 342 ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVS 419 (591)
T ss_pred cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhC
Confidence 11112234569999999999876 469999999999999999999999999999999999999 9999999999999999
Q ss_pred hHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 979 LMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 979 ~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
++.+|+.|||||||..||++||.+||.+++ ..+++++.+++++++++|.+.++|+||+|.++++|..|||||||||+||
T Consensus 420 ~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvsla 499 (591)
T KOG0057|consen 420 LESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLA 499 (591)
T ss_pred hHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHH
Confidence 999999999999999999999999998765 4689999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCCh
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSS 1137 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~ 1137 (1293)
||++++|+|+++|||||+||.+||+.|.+.+.+...++|+|+|.||++++++||+|+++++|++.+.|+|+||++ .++.
T Consensus 500 Ra~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~ 578 (591)
T KOG0057|consen 500 RAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSEL 578 (591)
T ss_pred HHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhH
Confidence 999999999999999999999999999999999888999999999999999999999999999999999999998 6667
Q ss_pred HHHHHHh
Q 000774 1138 FSKMVQS 1144 (1293)
Q Consensus 1138 ~~~l~~~ 1144 (1293)
|..++..
T Consensus 579 ~~~~w~~ 585 (591)
T KOG0057|consen 579 YADLWTT 585 (591)
T ss_pred HHHHhcc
Confidence 7766654
No 43
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.4e-66 Score=652.10 Aligned_cols=547 Identities=22% Similarity=0.305 Sum_probs=424.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 587 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 666 (1293)
Q Consensus 587 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 666 (1293)
.+.+++++.++..++....|+++....|..... .....+..++.++.+...+..++...+......+....++.+++++
T Consensus 20 ~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 98 (588)
T PRK13657 20 LGILLAVANVLLAAATFAEPILFGRIIDAISGK-GDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFER 98 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666677777777888887777654321 1111122222223333333344444444555556666677799999
Q ss_pred HHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 667 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 746 (1293)
Q Consensus 667 ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 746 (1293)
+++.|..+|++.+.|++++|+++|++.+...+...+..++..++..++.++++++.+|.+.++++.++++++.+..++.+
T Consensus 99 l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~ 178 (588)
T PRK13657 99 IIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMR 178 (588)
T ss_pred HHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877767767666666667777777788887766666555555556666666
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 747 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTA 826 (1293)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (1293)
..++..+......+...+.+.|.++|+++||+|+.++.+.+++.+..+...+..........+.....+++..+...++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (588)
T PRK13657 179 KTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAIL 258 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666778888999999999999999999999888888777776666554444443333333333222222211
Q ss_pred HH--HHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCC
Q 000774 827 TF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 904 (1293)
Q Consensus 827 ~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~ 904 (1293)
++ ..+..+..+ .+.+..++.+...+..++..+......+.....+.+|+.++.+.+++.+.. ..... ..+
T Consensus 259 ~~g~~~v~~g~lt-----~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~--~~~~~-~~~ 330 (588)
T PRK13657 259 VLGAALVQKGQLR-----VGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP--PGAID-LGR 330 (588)
T ss_pred HHHHHHHHcCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCCCC-cCC
Confidence 11 123344444 444555556666777788888888888888888999998887654432111 01000 011
Q ss_pred CCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhh
Q 000774 905 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 984 (1293)
Q Consensus 905 ~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~ 984 (1293)
..+.|+++||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+++...+|+
T Consensus 331 ~~~~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~ 409 (588)
T PRK13657 331 VKGAVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRR 409 (588)
T ss_pred CCCeEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHh
Confidence 23469999999999753 46999999999999999999999999999999999999999999999999999999999999
Q ss_pred hceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 985 ILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
+|+||||+|.+|++|++|||.++. +.++++++++++.+++++++.++|.|+||.++++|.+||||||||++|||||+++
T Consensus 410 ~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~ 489 (588)
T PRK13657 410 NIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKD 489 (588)
T ss_pred heEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999998764 4678999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHH
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~ 1143 (1293)
|+|||||||||+||+++++.+++.|++..+++|+|+||||++.+..||+|++|++|++++.|+|++++++ .+.|.+++.
T Consensus 490 ~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~ 568 (588)
T PRK13657 490 PPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLR 568 (588)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHH
Confidence 9999999999999999999999999998778999999999999999999999999999999999999975 467887776
Q ss_pred h
Q 000774 1144 S 1144 (1293)
Q Consensus 1144 ~ 1144 (1293)
.
T Consensus 569 ~ 569 (588)
T PRK13657 569 A 569 (588)
T ss_pred H
Confidence 4
No 44
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.6e-69 Score=665.22 Aligned_cols=441 Identities=21% Similarity=0.331 Sum_probs=336.9
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 589999999996 357999999999999999999999999999999999999999984321 1245
Q ss_pred EEEEcCCcccc-CccHHHHHccCCC-------CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGSA-------FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~~-------~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
++|++|++.++ ..||+||+.++.. .+. +++.+.++..++.+.. .....+||||||||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 149 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-----------DKLVGELSIGEQQM 149 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCc-----------cCchhhCCHHHHHH
Confidence 99999998876 5799999988632 111 1233444444443222 23446899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHh
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
++|||||+.+|++|||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..|+.+++.
T Consensus 150 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 150 VEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 999999999999999999999999999999988665554568899999999999864 8999999999998876543221
Q ss_pred hccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHHH
Q 000774 498 NNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSR 577 (1293)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 577 (1293)
... .
T Consensus 230 ~~~-----~----------------------------------------------------------------------- 233 (501)
T PRK10762 230 EDS-----L----------------------------------------------------------------------- 233 (501)
T ss_pred HHH-----H-----------------------------------------------------------------------
Confidence 000 0
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 578 YKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAK 657 (1293)
Q Consensus 578 y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 657 (1293)
.. .
T Consensus 234 -~~------------------------------~---------------------------------------------- 236 (501)
T PRK10762 234 -IE------------------------------M---------------------------------------------- 236 (501)
T ss_pred -HH------------------------------H----------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 658 RLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLF 737 (1293)
Q Consensus 658 ~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 737 (1293)
.
T Consensus 237 -----------------------------~-------------------------------------------------- 237 (501)
T PRK10762 237 -----------------------------M-------------------------------------------------- 237 (501)
T ss_pred -----------------------------h--------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 738 YAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIV 817 (1293)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1293)
+ +
T Consensus 238 ------~---------------~--------------------------------------------------------- 239 (501)
T PRK10762 238 ------V---------------G--------------------------------------------------------- 239 (501)
T ss_pred ------c---------------C---------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCC
Q 000774 818 GGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESN 897 (1293)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~ 897 (1293)
. +.. ..++..+ .
T Consensus 240 ----------------~--------------------------------------------~~~---~~~~~~~----~- 251 (501)
T PRK10762 240 ----------------R--------------------------------------------KLE---DQYPRLD----K- 251 (501)
T ss_pred ----------------C--------------------------------------------Ccc---ccccccc----c-
Confidence 0 000 0000000 0
Q ss_pred CCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC
Q 000774 898 RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF 977 (1293)
Q Consensus 898 ~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~ 977 (1293)
+ +....++++|+++ ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 252 -~----~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~ 319 (501)
T PRK10762 252 -A----PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTR 319 (501)
T ss_pred -C----CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCC
Confidence 0 0112489999984 379999999999999999999999999999999999999999999999998776
Q ss_pred ChH-HHhhhceEEcccc---cccc-ccHhhhcCCCCC--CCH--HHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCC
Q 000774 978 GLM-DLRKILGIIPQSP---VLFS-GTVRFNLDPFSE--HSD--ADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFS 1047 (1293)
Q Consensus 978 ~~~-~~r~~i~~v~Q~~---~lf~-~ti~~nl~~~~~--~~~--~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LS 1047 (1293)
++. .+|+++||+||++ .+|. .|+++|+.+... ... ...........+.++++.+ |+. ...++....||
T Consensus 320 ~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS 397 (501)
T PRK10762 320 SPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLF--NIKTPSMEQAIGLLS 397 (501)
T ss_pred CHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhc--CCCCCCccCchhhCC
Confidence 653 3567899999997 3554 599999964210 000 0000000112244555554 442 34566778899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1048 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1048 gGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|||++||+++.+.. ||+|++|++|+++..|
T Consensus 398 gGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~ 477 (501)
T PRK10762 398 GGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477 (501)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEe
Confidence 999999999999999999999999999999999999999999875 47899999999999877 9999999999999999
Q ss_pred Chhhh
Q 000774 1126 TPEEL 1130 (1293)
Q Consensus 1126 ~~~el 1130 (1293)
+++++
T Consensus 478 ~~~~~ 482 (501)
T PRK10762 478 TREQA 482 (501)
T ss_pred ccccC
Confidence 88765
No 45
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.5e-69 Score=663.33 Aligned_cols=450 Identities=24% Similarity=0.400 Sum_probs=343.7
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceee-------------cC
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 349 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~-------------~~ 349 (1293)
+.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|....- +.
T Consensus 10 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 10 PLLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQL 86 (510)
T ss_pred ceEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhC
Confidence 3699999999996 3579999999999999999999999999999999999999999843211 13
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCCCC---HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSAFE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
.+||++|++.++ ..||+||+.++.... .+++.+.++..++.+.. .....+||||||||++|||||
T Consensus 87 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~aL 155 (510)
T PRK15439 87 GIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-----------DSSAGSLEVADRQIVEILRGL 155 (510)
T ss_pred CEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-----------cCChhhCCHHHHHHHHHHHHH
Confidence 599999999886 569999999874321 23445556666554322 234468999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhccHHHH
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNGELFQ 504 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 504 (1293)
+.+|++|||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++. .||+|++|++|++++.|+++++.... ..+
T Consensus 156 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-~~~ 234 (510)
T PRK15439 156 MRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD-IIQ 234 (510)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-HHH
Confidence 9999999999999999999999999876655556899999999999986 48999999999999988876653210 000
Q ss_pred HHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHHHHHHHhch
Q 000774 505 KLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGG 584 (1293)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~ 584 (1293)
.+. .
T Consensus 235 ~~~---------------~------------------------------------------------------------- 238 (510)
T PRK15439 235 AIT---------------P------------------------------------------------------------- 238 (510)
T ss_pred HHh---------------C-------------------------------------------------------------
Confidence 000 0
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 585 LWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 664 (1293)
Q Consensus 585 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 664 (1293)
T Consensus 239 -------------------------------------------------------------------------------- 238 (510)
T PRK15439 239 -------------------------------------------------------------------------------- 238 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 665 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 744 (1293)
Q Consensus 665 ~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 744 (1293)
.+ ..
T Consensus 239 -----~~--------~~--------------------------------------------------------------- 242 (510)
T PRK15439 239 -----AA--------RE--------------------------------------------------------------- 242 (510)
T ss_pred -----cc--------cc---------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 745 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 824 (1293)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1293)
.. ..
T Consensus 243 ----~~---~~--------------------------------------------------------------------- 246 (510)
T PRK15439 243 ----KS---LS--------------------------------------------------------------------- 246 (510)
T ss_pred ----cc---cc---------------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCC
Q 000774 825 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 904 (1293)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~ 904 (1293)
..++.. ...+...+ . .+ +
T Consensus 247 ---------------------------------------------------~~~~~~--~~~~~~~~-----~-~~---~ 264 (510)
T PRK15439 247 ---------------------------------------------------ASQKLW--LELPGNRR-----Q-QA---A 264 (510)
T ss_pred ---------------------------------------------------cccccc--cccccccc-----c-cC---C
Confidence 000000 00000000 0 00 0
Q ss_pred CCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH-Hh
Q 000774 905 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LR 983 (1293)
Q Consensus 905 ~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~-~r 983 (1293)
....++++|+++ .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++.. .|
T Consensus 265 ~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 337 (510)
T PRK15439 265 GAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLA 337 (510)
T ss_pred CCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHh
Confidence 112489999983 2699999999999999999999999999999999999999999999999998766654 35
Q ss_pred hhceEEcccc---ccccc-cHhhhcCCC--C--CC--CHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHH
Q 000774 984 KILGIIPQSP---VLFSG-TVRFNLDPF--S--EH--SDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 984 ~~i~~v~Q~~---~lf~~-ti~~nl~~~--~--~~--~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkq 1052 (1293)
+.|+|+||++ .+|.. |+.+|+... . .. ...+ ....+.++++.+ |+. ...+.....|||||||
T Consensus 338 ~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kq 410 (510)
T PRK15439 338 RGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAR-----ENAVLERYRRAL--NIKFNHAEQAARTLSGGNQQ 410 (510)
T ss_pred CCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHH-----HHHHHHHHHHHc--CCCCCCccCccccCCcHHHH
Confidence 6799999986 36654 999998421 0 00 1111 112244555554 454 3456677889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
||+|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+||||++++.. |||+++|++|+++..|+++++
T Consensus 411 rl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 490 (510)
T PRK15439 411 KVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAI 490 (510)
T ss_pred HHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 9999999999999999999999999999999999999865 47899999999999977 999999999999999998876
Q ss_pred h
Q 000774 1131 L 1131 (1293)
Q Consensus 1131 ~ 1131 (1293)
.
T Consensus 491 ~ 491 (510)
T PRK15439 491 N 491 (510)
T ss_pred C
Confidence 5
No 46
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-69 Score=600.31 Aligned_cols=546 Identities=22% Similarity=0.365 Sum_probs=418.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 589 LILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFG------QVLVTLANSYWLIISSLYAAKRLHDA 662 (1293)
Q Consensus 589 ~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~ 662 (1293)
+.+++++++.-.+....|.+.....+...............|.++.+. +.++.-+++++.........+.+--+
T Consensus 218 ~~cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~ 297 (790)
T KOG0056|consen 218 VFCLFLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETE 297 (790)
T ss_pred HHHHHHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHH
Confidence 334444445555666666655555554432111222233444444443 35667778888888899999999999
Q ss_pred HHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 663 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFV-LIGIVSTMSLWAIMPLLLLFYAAY 741 (1293)
Q Consensus 663 ~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~ 741 (1293)
+|+|+..+++.|+-.+.+|+.+.-+......+. .....+..+...+.-+.++++ +....++++.++++..+.++....
T Consensus 298 lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~T 376 (790)
T KOG0056|consen 298 LFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVT 376 (790)
T ss_pred HHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhhee
Confidence 999999999999999999998877776665554 333333333333333333322 222345555555444444433322
Q ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 742 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 821 (1293)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1293)
.....-..+.+|....+...-.+.-.+++-+.+++|-|+++++..+++.+...++++..++....-..+......+.++.
T Consensus 377 i~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lg 456 (790)
T KOG0056|consen 377 IKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLG 456 (790)
T ss_pred eeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 22211122222222222222334567899999999999999999999999999999988887765555554444333322
Q ss_pred HHHHHHHHH--HhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCC
Q 000774 822 IWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRP 899 (1293)
Q Consensus 822 ~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~ 899 (1293)
......+.+ +..+..+ .+...++.+|.+++..+++++......+++.+.-+|++.++++.++|. .+.+..
T Consensus 457 ll~gsll~aY~Vt~q~lt-----VGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eV---vd~P~a 528 (790)
T KOG0056|consen 457 LLAGSLLCAYRVTEQTLT-----VGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEV---VDLPGA 528 (790)
T ss_pred Hhhhhheeeeeeeecccc-----ccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchh---hcCCCC
Confidence 222221111 1122222 455667889999999999999999999999999999999998655442 222222
Q ss_pred CCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh
Q 000774 900 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL 979 (1293)
Q Consensus 900 ~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~ 979 (1293)
++.....|.|+|+||+|.|.++ +|+|+||||+++||+.+|+|||||+||||++++|+|+++.++|.|.|||+||+....
T Consensus 529 ~pl~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~ 607 (790)
T KOG0056|consen 529 PPLKVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQ 607 (790)
T ss_pred CCccccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHH
Confidence 2222346889999999999876 479999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
+.+|++||+||||..||++||..||.+.. .+++|++.+|++.++++|.|..+|+||+|.++|+|-.||||||||+++||
T Consensus 608 ~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiAR 687 (790)
T KOG0056|consen 608 SSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIAR 687 (790)
T ss_pred HHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHH
Confidence 99999999999999999999999998654 46899999999999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChH
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSF 1138 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~ 1138 (1293)
+++++|.|++|||+||+||..|++.|+.+|.+...++|.|+|+||++++-+||.|+|+++|+|+|.|+|+||+.+.+|.|
T Consensus 688 tiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Y 767 (790)
T KOG0056|consen 688 TILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAY 767 (790)
T ss_pred HHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHh
Q 000774 1139 SKMVQS 1144 (1293)
Q Consensus 1139 ~~l~~~ 1144 (1293)
.+|++.
T Consensus 768 a~MWq~ 773 (790)
T KOG0056|consen 768 ADMWQA 773 (790)
T ss_pred HHHHHH
Confidence 999974
No 47
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.4e-67 Score=653.95 Aligned_cols=488 Identities=27% Similarity=0.399 Sum_probs=412.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000774 21 VVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWS-APFRII 99 (1293)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~~l~~~~~-~~~~~i 99 (1293)
.++..++.....+...+.+.++...+|..+|+|+++++..++++.++|++++++++|++.++..+......+. .++.++
T Consensus 62 ~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~ 141 (567)
T COG1132 62 ALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLI 141 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3344555555555566677999999999999999999999999999999999999999999997755433333 456666
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHH
Q 000774 100 ISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVR 179 (1293)
Q Consensus 100 ~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~ 179 (1293)
..+++++...|.++++.+++.+++..+..++.++.++..++.++..++..+.+.|.++|++++|.|+.++...+++.+..
T Consensus 142 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~ 221 (567)
T COG1132 142 GSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEAN 221 (567)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHH
Confidence 66777777777788887777777777777777777888999999999999999999999999999999998877777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 180 NDELSWFRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVS 257 (1293)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s 257 (1293)
+...+...+..........+...+. ..+.++.++.+.+..+.+++|.+++++.++..+..|+..+...+..+..+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a 301 (567)
T COG1132 222 EELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAA 301 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666554443444343333322222 23445566777788889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCC
Q 000774 258 LKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL 337 (1293)
Q Consensus 258 ~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~ 337 (1293)
++|+.++++.++...............|+++||+|+|++ ++++|+|+||++++||++|||||||||||||+++|+|++
T Consensus 302 ~~ri~~~l~~~~~~~~~~~~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~ 379 (567)
T COG1132 302 AERLFELLDEEPEVEDPPDPLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLY 379 (567)
T ss_pred HHHHHHHHcCCccccCCCCCCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccC
Confidence 999999999865432222111223346999999999974 578999999999999999999999999999999999999
Q ss_pred CCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccc
Q 000774 338 PPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEI 404 (1293)
Q Consensus 338 ~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~i 404 (1293)
+|++|.... +|++|+||||+|+||++||+|||.+|++ .++++++++++.+++++++..+|+|++|.+
T Consensus 380 ~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~v 459 (567)
T COG1132 380 DPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIV 459 (567)
T ss_pred CCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccee
Confidence 999984332 3567999999999999999999999987 688999999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeC
Q 000774 405 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 484 (1293)
Q Consensus 405 g~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~ 484 (1293)
||+|.+||||||||++||||+++||+|||||||||+||+++++.+.+.+. ...++||+|+|+||++.+.+||+|+||++
T Consensus 460 ge~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~-~l~~~rT~iiIaHRlsti~~aD~IiVl~~ 538 (567)
T COG1132 460 GERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALK-KLLKGRTTLIIAHRLSTIKNADRIIVLDN 538 (567)
T ss_pred cCCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHH-HHhcCCEEEEEeccHhHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999988765 34477999999999999999999999999
Q ss_pred CeEEEecChHHHhhccHHHHHHHHHhc
Q 000774 485 GMVKEEGTFEDLSNNGELFQKLMENAG 511 (1293)
Q Consensus 485 G~i~~~g~~~~l~~~~~~~~~~~~~~~ 511 (1293)
|+|++.|+|+||+++++.|++++..+.
T Consensus 539 G~i~e~G~h~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 539 GRIVERGTHEELLAKGGLYARLYQAQG 565 (567)
T ss_pred CEEEEecCHHHHHHcCCHHHHHHHHhh
Confidence 999999999999999999999997653
No 48
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-68 Score=661.70 Aligned_cols=201 Identities=17% Similarity=0.334 Sum_probs=169.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|. +++|
T Consensus 319 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i~ 385 (530)
T PRK15064 319 ALEVENLTKGFDNG--PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-----------ANIG 385 (530)
T ss_pred eEEEEeeEEeeCCc--eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eEEE
Confidence 59999999999753 6999999999999999999999999999999999999999999999872 4799
Q ss_pred EEccccc--ccc-ccHhhhcCCCC--CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSPV--LFS-GTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~~--lf~-~ti~~nl~~~~--~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+||++. ++. .|+++|+..+. ...++++.+.++..++. .........+||||||||++||||++.
T Consensus 386 ~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 386 YYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFS----------QDDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred EEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCC----------hhHhcCcccccCHHHHHHHHHHHHHhc
Confidence 9999974 444 59999986432 11223344444443321 123455677899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEe-eecChhhhhhc
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELLSN 1133 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~-~~g~~~el~~~ 1133 (1293)
+|+||||||||++||+.+.+.+++.|++. ++|||+|||+++++.. ||||++|++|+++ ..|+++++++.
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 99999999999999999999999999885 5699999999999887 9999999999998 77999888753
No 49
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.9e-67 Score=651.48 Aligned_cols=486 Identities=20% Similarity=0.290 Sum_probs=407.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000774 19 VGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFR 97 (1293)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~ 97 (1293)
++.++..++.+...+...+.+.++...+|..+|+|+++++..++++.++|++++++++|++.++.++ ..+..++...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~ 147 (574)
T PRK11160 68 GAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVV 147 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666666677788999999999999999999999999999999999999999999999976 445666666777
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHH
Q 000774 98 IIISLVLLYNELGVASLLGALLLVFMFP-VQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQ 176 (1293)
Q Consensus 98 ~i~~~~~l~~~~~~~~l~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~ 176 (1293)
++++++++++..|.++++.++++++.++ ++.++.++.++..++.++..++..+.+.|.++|+++||.|+.|+.+.++++
T Consensus 148 ~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~ 227 (574)
T PRK11160 148 ILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLE 227 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHH
Confidence 7777778888888888777665555444 345666777888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000774 177 NVRNDELSWFRKAQFLAACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVL-RFPLFMLPNMITQVVN 253 (1293)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l-~~pl~~l~~~~~~~~~ 253 (1293)
+..++..+...+..+.......+...+..+ +.++++|++. ..|.+++|.+++++.+.... ..|+..++..+..+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~ 306 (574)
T PRK11160 228 QTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQ 306 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988887777666666655555444433322 2334556666 47889999998887766444 4588889999999999
Q ss_pred HHHHHHHHHHHhhhhhcccCC-CCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHH
Q 000774 254 ANVSLKRMEEFLLAEEKILLP-NPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISA 332 (1293)
Q Consensus 254 ~~~s~~Ri~~~l~~~~~~~~~-~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~ 332 (1293)
+..+++||.++++.+++...+ ..........|+++||+|+|++ +++++|+|+||++++||++||+||||||||||+++
T Consensus 307 ~~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~-~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~l 385 (574)
T PRK11160 307 VIASARRINEITEQKPEVTFPTTSTAAADQVSLTLNNVSFTYPD-QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQL 385 (574)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCCCCCeEEEEEEEEECCC-CCCcceecceEEECCCCEEEEECCCCCCHHHHHHH
Confidence 999999999999876542211 1111122346999999999974 24679999999999999999999999999999999
Q ss_pred HhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCC
Q 000774 333 MLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGG 399 (1293)
Q Consensus 333 l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g 399 (1293)
|+|+++|++|... .+|+.|+||||+|++|++||+|||.++.+ .++++++++++.++++++++. |+|
T Consensus 386 l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~G 464 (574)
T PRK11160 386 LTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKG 464 (574)
T ss_pred HhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccc
Confidence 9999999998432 13457999999999999999999999865 678899999999999999999 999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeE
Q 000774 400 DVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRI 479 (1293)
Q Consensus 400 ~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i 479 (1293)
++|.+||+|.+||||||||++|||||+++|++||||||||+||+++++.+.+.+.+ ..+++|+|+||||++.++.||+|
T Consensus 465 ldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~-~~~~~tviiitHr~~~~~~~d~i 543 (574)
T PRK11160 465 LNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAE-HAQNKTVLMITHRLTGLEQFDRI 543 (574)
T ss_pred cCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH-HcCCCEEEEEecChhHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999886544 45689999999999999999999
Q ss_pred EEEeCCeEEEecChHHHhhccHHHHHHHH
Q 000774 480 ILVHEGMVKEEGTFEDLSNNGELFQKLME 508 (1293)
Q Consensus 480 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 508 (1293)
++|++|++++.|+|+|++++++.|+++++
T Consensus 544 ~~l~~G~i~~~g~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 544 CVMDNGQIIEQGTHQELLAQQGRYYQLKQ 572 (574)
T ss_pred EEEeCCeEEEeCCHHHHHhcCcHHHHHHh
Confidence 99999999999999999999999999875
No 50
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.2e-67 Score=669.09 Aligned_cols=480 Identities=24% Similarity=0.353 Sum_probs=412.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000774 16 SIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSA 94 (1293)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~-~l~~~~~~ 94 (1293)
+++++.++..++.....+...+.+.++...++..+|+|++++|..+ .+.++|++++++ +|++.+++++. .+...+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~ 269 (694)
T TIGR03375 192 GVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALID 269 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHH
Confidence 3444455566666667777788999999999999999999999987 678999999998 89999998653 44445555
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Q 000774 95 PFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSK 174 (1293)
Q Consensus 95 ~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~ 174 (1293)
.+.++++++++++..++++++.++++++++++..++.++.++..++..+..+++.+.+.|.++|+++||.|++|+.+.++
T Consensus 270 ~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 349 (694)
T TIGR03375 270 LPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRR 349 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHH
Confidence 55565666677778888888888888888888888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 175 VQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVV 252 (1293)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~ 252 (1293)
+++..++..+...+..........+...+.. .+.++++|++.+..|.+|+|.+++++.++..+..|+..++..+..+.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~ 429 (694)
T TIGR03375 350 WEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQ 429 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888877777766666555544444332 23456678888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccCCCC-C-CCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHH
Q 000774 253 NANVSLKRMEEFLLAEEKILLPNP-P-LTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLI 330 (1293)
Q Consensus 253 ~~~~s~~Ri~~~l~~~~~~~~~~~-~-~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl 330 (1293)
.+..+++|+.++++.+++...... . .......|+++||+|+|++ .++++|+|+||+|++||++||||+||||||||+
T Consensus 430 ~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~I~~~~vsf~Y~~-~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLl 508 (694)
T TIGR03375 430 QAKTALQSLDELMQLPVERPEGTRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLL 508 (694)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCCCCCCccceEEEEEEEEEeCC-CCccceeeeeEEECCCCEEEEECCCCCCHHHHH
Confidence 999999999999987654321111 0 1112346999999999974 356899999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCC
Q 000774 331 SAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLP 397 (1293)
Q Consensus 331 ~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~ 397 (1293)
++|+|+++|++|... .+|+.|+||||+|++|++||+|||.++++ .++++++++++.++++++++.+|
T Consensus 509 klL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp 588 (694)
T TIGR03375 509 KLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHP 588 (694)
T ss_pred HHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCc
Confidence 999999999998432 13568999999999999999999999976 78899999999999999999999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCC
Q 000774 398 GGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVD 477 (1293)
Q Consensus 398 ~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d 477 (1293)
+|++|.+||+|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.+. ...+++|+|+||||++.++.||
T Consensus 589 ~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~-~~~~~~T~iiItHrl~~~~~~D 667 (694)
T TIGR03375 589 DGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLK-RWLAGKTLVLVTHRTSLLDLVD 667 (694)
T ss_pred ccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHH-HHhCCCEEEEEecCHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999988654 4456899999999999999999
Q ss_pred eEEEEeCCeEEEecChHHHhhc
Q 000774 478 RIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 478 ~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
+|++|++|++++.|+|+||++.
T Consensus 668 ~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 668 RIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred EEEEEeCCEEEeeCCHHHHHHH
Confidence 9999999999999999999754
No 51
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-69 Score=661.46 Aligned_cols=445 Identities=21% Similarity=0.291 Sum_probs=335.4
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecC
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 349 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~ 349 (1293)
+.|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... ++.
T Consensus 3 ~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 79 (501)
T PRK11288 3 PYLSFDGIGKTFP---GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAA 79 (501)
T ss_pred ceEEEeeeEEEEC---CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhC
Confidence 3689999999996 357999999999999999999999999999999999999999985321 134
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCC------CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSA------FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~------~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
.|+|++|++.++ ..||+||+.++.. .+. +++.++++..++... ......+||||||||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~qr 148 (501)
T PRK11288 80 GVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQRQM 148 (501)
T ss_pred CEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHHHH
Confidence 699999999887 4699999987631 111 233444555444321 233456899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHh
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
++|||||+.+|++|||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..++..+..
T Consensus 149 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 228 (501)
T PRK11288 149 VEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQV 228 (501)
T ss_pred HHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccC
Confidence 999999999999999999999999999999998766554568999999999999865 8999999999988543210000
Q ss_pred hccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHHH
Q 000774 498 NNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSR 577 (1293)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 577 (1293)
. .+.
T Consensus 229 ~---------------------------------------------------------------~~~------------- 232 (501)
T PRK11288 229 D---------------------------------------------------------------RDQ------------- 232 (501)
T ss_pred C---------------------------------------------------------------HHH-------------
Confidence 0 000
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 578 YKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAK 657 (1293)
Q Consensus 578 y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 657 (1293)
+..
T Consensus 233 ~~~----------------------------------------------------------------------------- 235 (501)
T PRK11288 233 LVQ----------------------------------------------------------------------------- 235 (501)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 658 RLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLF 737 (1293)
Q Consensus 658 ~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 737 (1293)
.+
T Consensus 236 ----------------------------~~-------------------------------------------------- 237 (501)
T PRK11288 236 ----------------------------AM-------------------------------------------------- 237 (501)
T ss_pred ----------------------------Hh--------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 738 YAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIV 817 (1293)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1293)
. .
T Consensus 238 ------~--------------~---------------------------------------------------------- 239 (501)
T PRK11288 238 ------V--------------G---------------------------------------------------------- 239 (501)
T ss_pred ------c--------------C----------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCC
Q 000774 818 GGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESN 897 (1293)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~ 897 (1293)
... .+ .....+.
T Consensus 240 ----------------~~~-----------------------------------------~~---~~~~~~~-------- 251 (501)
T PRK11288 240 ----------------REI-----------------------------------------GD---IYGYRPR-------- 251 (501)
T ss_pred ----------------CCc-----------------------------------------cc---ccccccc--------
Confidence 000 00 0000000
Q ss_pred CCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC
Q 000774 898 RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF 977 (1293)
Q Consensus 898 ~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~ 977 (1293)
+ +....++++|+++. .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 252 -~----~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~ 320 (501)
T PRK11288 252 -P----LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIR 320 (501)
T ss_pred -C----CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCC
Confidence 0 01124889999742 489999999999999999999999999999999999999999999999998654
Q ss_pred Ch-HHHhhhceEEccccc---ccc-ccHhhhcCCCCCCC--HHH--HHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCC
Q 000774 978 GL-MDLRKILGIIPQSPV---LFS-GTVRFNLDPFSEHS--DAD--LWEALERAHLKDAIRRNSLGLD-AQVSEAGENFS 1047 (1293)
Q Consensus 978 ~~-~~~r~~i~~v~Q~~~---lf~-~ti~~nl~~~~~~~--~~~--~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LS 1047 (1293)
++ ...|+.++|+||++. +|. .|+.+|+.+..... ... .........+.++++.+ +++ ........+||
T Consensus 321 ~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS 398 (501)
T PRK11288 321 SPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSL--NIKTPSREQLIMNLS 398 (501)
T ss_pred CHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhc--CcccCCccCccccCC
Confidence 43 345678999999973 554 69999986421100 000 00000112234455554 442 33556677899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1048 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1048 gGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
|||||||+|||||+.+|+||||||||+|||+.+.+.+++.|+++. .+.|||+||||++++.. ||++++|++|++++.|
T Consensus 399 gGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~ 478 (501)
T PRK11288 399 GGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGEL 478 (501)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEE
Confidence 999999999999999999999999999999999999999998865 47899999999999977 9999999999999999
Q ss_pred Chhhhh
Q 000774 1126 TPEELL 1131 (1293)
Q Consensus 1126 ~~~el~ 1131 (1293)
+++++.
T Consensus 479 ~~~~~~ 484 (501)
T PRK11288 479 AREQAT 484 (501)
T ss_pred ccccCC
Confidence 988764
No 52
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.1e-69 Score=661.68 Aligned_cols=448 Identities=20% Similarity=0.291 Sum_probs=334.5
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCC--CCCCcee-------------ecC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP--VSDASAV-------------IRG 349 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~--~~g~~~~-------------~~~ 349 (1293)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|.... .+.
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 78999999996 35799999999999999999999999999999999999987 6774321 124
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCCC-------CH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSAF-------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~~-------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
.|+||+|++.++ ..||+||+.++... +. ++..++++..++.+.. ......+|||||||
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~q 148 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN----------VTRPVGDYGGGQQQ 148 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc----------ccCchhhCCHHHHH
Confidence 599999999876 56999999876321 11 1233344444432211 01234689999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
|++|||||+.+|++|||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..|+.+++
T Consensus 149 rv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 149 LVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 9999999999999999999999999999999998766555568999999999999875 899999999998865532210
Q ss_pred hhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHH
Q 000774 497 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 576 (1293)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 576 (1293)
... .
T Consensus 229 ~~~---------------------------------------------------------------~------------- 232 (500)
T TIGR02633 229 SED---------------------------------------------------------------D------------- 232 (500)
T ss_pred CHH---------------------------------------------------------------H-------------
Confidence 000 0
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 577 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 656 (1293)
Q Consensus 577 ~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 656 (1293)
...
T Consensus 233 -~~~---------------------------------------------------------------------------- 235 (500)
T TIGR02633 233 -IIT---------------------------------------------------------------------------- 235 (500)
T ss_pred -HHH----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 657 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 736 (1293)
Q Consensus 657 ~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 736 (1293)
++
T Consensus 236 -----------------------------~~------------------------------------------------- 237 (500)
T TIGR02633 236 -----------------------------MM------------------------------------------------- 237 (500)
T ss_pred -----------------------------HH-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 737 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 816 (1293)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1293)
.
T Consensus 238 -------~------------------------------------------------------------------------ 238 (500)
T TIGR02633 238 -------V------------------------------------------------------------------------ 238 (500)
T ss_pred -------h------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCC
Q 000774 817 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 896 (1293)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~ 896 (1293)
+. +... ..+...
T Consensus 239 -----------------~~-------------------------------------------~~~~--~~~~~~------ 250 (500)
T TIGR02633 239 -----------------GR-------------------------------------------EITS--LYPHEP------ 250 (500)
T ss_pred -----------------Cc-------------------------------------------cccc--cccccc------
Confidence 00 0000 000000
Q ss_pred CCCCCCCCCCccEEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-CcceEEECCeec
Q 000774 897 NRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-ERGRILIDGFDI 974 (1293)
Q Consensus 897 ~~~~~~~~~~g~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-~~G~I~i~g~~i 974 (1293)
.+ +....++++|++++|+++ ...+|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++
T Consensus 251 -~~----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~ 325 (500)
T TIGR02633 251 -HE----IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPV 325 (500)
T ss_pred -cC----CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEEC
Confidence 00 011248999999999421 23599999999999999999999999999999999999996 899999999998
Q ss_pred CCCCh-HHHhhhceEEcccc---cccc-ccHhhhcCCCCC--CCH-HHHHHHHHHhhHHHHHHHccCCcch-hhhcCCCC
Q 000774 975 AKFGL-MDLRKILGIIPQSP---VLFS-GTVRFNLDPFSE--HSD-ADLWEALERAHLKDAIRRNSLGLDA-QVSEAGEN 1045 (1293)
Q Consensus 975 ~~~~~-~~~r~~i~~v~Q~~---~lf~-~ti~~nl~~~~~--~~~-~~~~~~l~~~~l~~~i~~lp~gl~~-~~~~~~~~ 1045 (1293)
...+. ..+|++|||+||++ .+|. .|+++|+.+... ... ..+........+.++++.+ ++.. ........
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~ 403 (500)
T TIGR02633 326 DIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRL--KVKTASPFLPIGR 403 (500)
T ss_pred CCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhc--CccCCCccCcccc
Confidence 65443 45677899999996 3665 499999865210 000 0000011112344555554 3432 34556678
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEee
Q 000774 1046 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1123 (1293)
Q Consensus 1046 LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 1123 (1293)
||||||||++|||||+.+|++|||||||++||+.+.+.+++.|+++. ++.|||+||||++++.. |||+++|++|+++.
T Consensus 404 LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~ 483 (500)
T TIGR02633 404 LSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKG 483 (500)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998864 47899999999999977 99999999999998
Q ss_pred ecChhhh
Q 000774 1124 YDTPEEL 1130 (1293)
Q Consensus 1124 ~g~~~el 1130 (1293)
.++.+++
T Consensus 484 ~~~~~~~ 490 (500)
T TIGR02633 484 DFVNHAL 490 (500)
T ss_pred EEccccC
Confidence 7765443
No 53
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-67 Score=596.76 Aligned_cols=483 Identities=24% Similarity=0.365 Sum_probs=393.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 23 LGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISL 102 (1293)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~~l~~~~~~~~~~i~~~ 102 (1293)
.+...++.-....+...+++.+++|..+|+|+...++.....+++||++||++.||+.+++++..+..++...+.++.+.
T Consensus 70 ~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~ 149 (573)
T COG4987 70 LRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVV 149 (573)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHH
Confidence 33333333334466789999999999999999999999999999999999999999999998876666665554444333
Q ss_pred H-HH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHH
Q 000774 103 V-LL-YNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRN 180 (1293)
Q Consensus 103 ~-~l-~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~ 180 (1293)
+ .+ |+-.+.+.++++.+++..++++..+.+..++..++..+.+....+.+.|.+.|...++.||.++.+.+.+....+
T Consensus 150 ~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~ 229 (573)
T COG4987 150 TIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEA 229 (573)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHH
Confidence 3 22 444455556666666666667777777778888888888999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HhcCCCC-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000774 181 DELSWFRKAQFLAACNSFILNSIPVLVTV-VSFGMFT-LLGGDLT-PARAFTSLSLFAVLRFPLFMLP-NMITQVVNANV 256 (1293)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~-~~~~~lt-~~~~~~~l~~~~~l~~pl~~l~-~~~~~~~~~~~ 256 (1293)
.+.+..++.+.+..+..++..++..++++ ..++... .-.|..+ +..+...+..|..+ .++..+. ..+....+...
T Consensus 230 ~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~-eaf~~L~~~A~~~lgq~~~ 308 (573)
T COG4987 230 SWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAAL-EAFEPLAPGAFQHLGQVIA 308 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHH-HHHhhhcchhHHHhhHHHH
Confidence 88888888888888888887776554433 2222222 2334444 33333333323322 2333343 77788999999
Q ss_pred HHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcC
Q 000774 257 SLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGE 336 (1293)
Q Consensus 257 s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~ 336 (1293)
|++|+.++.+++++...+++........++++||+|+|++ ++.++|+|+||++++||++||+|+||||||||+++|.|.
T Consensus 309 Sa~Rl~~i~~q~~e~~~~~~~~~~~~~~l~~~~vsF~y~~-~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~ 387 (573)
T COG4987 309 SARRLNDILDQKPEVTFPDEQTATTGQALELRNVSFTYPG-QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGA 387 (573)
T ss_pred HHHHHhhhccCCcccCCCccccCCccceeeeccceeecCC-CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhc
Confidence 9999999998877654432211111227999999999985 456899999999999999999999999999999999999
Q ss_pred CCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCccc
Q 000774 337 LPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTE 403 (1293)
Q Consensus 337 ~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ 403 (1293)
++|++|+... ++..|++++|.+++|++|+|||+.++++ .++++++++++.++|++.+...|+|++|+
T Consensus 388 ~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~ 467 (573)
T COG4987 388 WDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTW 467 (573)
T ss_pred cCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhch
Confidence 9999984321 3347999999999999999999999976 57899999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEe
Q 000774 404 IGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVH 483 (1293)
Q Consensus 404 ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~ 483 (1293)
+||+|.+||||||||++|||+|++|++++||||||.+||+.|++++.+.+.. ..+|||+|+||||+..++.+|||++|+
T Consensus 468 lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~-~~~~kTll~vTHrL~~le~~drIivl~ 546 (573)
T COG4987 468 LGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFE-HAEGKTLLMVTHRLRGLERMDRIIVLD 546 (573)
T ss_pred hccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHH-HhcCCeEEEEecccccHhhcCEEEEEE
Confidence 9999999999999999999999999999999999999999999999986655 457999999999999999999999999
Q ss_pred CCeEEEecChHHHhhccHHHHHHHH
Q 000774 484 EGMVKEEGTFEDLSNNGELFQKLME 508 (1293)
Q Consensus 484 ~G~i~~~g~~~~l~~~~~~~~~~~~ 508 (1293)
+|+++++|+|++++.+++.|+++.+
T Consensus 547 ~Gkiie~G~~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 547 NGKIIEEGTHAELLANNGRYKRLYQ 571 (573)
T ss_pred CCeeeecCCHHhhhccccHHHHHhc
Confidence 9999999999999999999988764
No 54
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.4e-65 Score=642.01 Aligned_cols=548 Identities=20% Similarity=0.259 Sum_probs=425.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 586 WVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLH 665 (1293)
Q Consensus 586 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 665 (1293)
+.+++.+++.++..++.+..|+.++..+|...... ....+...+.++.+...+..++...+......+...+++.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 97 (585)
T TIGR01192 19 NRVLLIVIANITLAAITIAEPILFGRIIDAISSKS-DVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFG 97 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666667777778888888877776543211 11112222222233333444444555555556666677789999
Q ss_pred HHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 666 SILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQ 745 (1293)
Q Consensus 666 ~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 745 (1293)
+++++|+.||+++++|++++|+++|++.+...+...+..++..++.++..+++++.++|.+.++++.++++++.+...+.
T Consensus 98 ~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~ 177 (585)
T TIGR01192 98 RIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVM 177 (585)
T ss_pred HHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877777777777777777777888888877766655555555556666
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 000774 746 STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM---I 822 (1293)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 822 (1293)
+..++..+......+...+.+.|.++|+++||+|+.++.+.+++.+..+...+..........+......++..+. +
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 257 (585)
T TIGR01192 178 QRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCI 257 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666666778889999999999999999999988888877777665554443333333222222222221 1
Q ss_pred HHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCC
Q 000774 823 WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 902 (1293)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~ 902 (1293)
++.+.+. +..+..+ .+.+..++.+...+..++..+......+.....+.+|+.++.+.+++.... ..+...
T Consensus 258 ~~~g~~~-v~~g~it-----~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~~~~~~ 328 (585)
T TIGR01192 258 LVIGTVL-VIKGELS-----VGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP---ADAPEL 328 (585)
T ss_pred HHHHHHH-HHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---ccCCCC
Confidence 2222222 3344444 444555666667777788888888888888899999999988755432111 111111
Q ss_pred CCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH
Q 000774 903 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 982 (1293)
Q Consensus 903 ~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~ 982 (1293)
.+..+.++++||+|+|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.|+.++++..+
T Consensus 329 ~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~ 407 (585)
T TIGR01192 329 PNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESL 407 (585)
T ss_pred CCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHH
Confidence 1123569999999999753 368999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 983 RKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
|++++||||+|.+|++|++|||.++. +.++++++++++.+++++++.++|+|++|.+++.|.+|||||||||+|||||+
T Consensus 408 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall 487 (585)
T TIGR01192 408 RKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAIL 487 (585)
T ss_pred HhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999998764 45788999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHH
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 1141 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l 1141 (1293)
++|++||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|++++.|+|++++++ ++.|+++
T Consensus 488 ~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l 566 (585)
T TIGR01192 488 KNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK-DGRFYKL 566 (585)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-CChHHHH
Confidence 999999999999999999999999999988788999999999999988999999999999999999999975 4678877
Q ss_pred HHhh
Q 000774 1142 VQST 1145 (1293)
Q Consensus 1142 ~~~~ 1145 (1293)
+...
T Consensus 567 ~~~~ 570 (585)
T TIGR01192 567 LRRS 570 (585)
T ss_pred HHhC
Confidence 7653
No 55
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.8e-66 Score=650.34 Aligned_cols=487 Identities=20% Similarity=0.246 Sum_probs=402.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000774 20 GVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRI 98 (1293)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~-~l~~~~~~~~~~ 98 (1293)
..++..++.+...+...+.+.++...+|..+|+|+++.|..++++.++|++++++++|++.++.++. .+..++...+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~ 153 (592)
T PRK10790 74 LQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALI 153 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666677788999999999999999999999999999999999999999999998653 455556666666
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Q 000774 99 IISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNV 178 (1293)
Q Consensus 99 i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~ 178 (1293)
+++++++++..++++++.++++++.+.+..+..++.++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++.+.
T Consensus 154 ~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~ 233 (592)
T PRK10790 154 GAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEA 233 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHH
Confidence 66666777777777777766666666566666677777777778888888999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 179 RNDELSWFRKAQFLAACN-SFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNAN 255 (1293)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~ 255 (1293)
.++..+...+........ ..+...+..+ +.++.++++ +..|.+++|.+++++.++..+..|+..++..+..+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~ 312 (592)
T PRK10790 234 SRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAV 312 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776555543333322221 1111111111 111122223 467899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhc
Q 000774 256 VSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLG 335 (1293)
Q Consensus 256 ~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g 335 (1293)
.+++||.++++.+++...... .......|+++|++|+|++ ++++|+|+||+|++||++||+|+||||||||+++|+|
T Consensus 313 ~s~~ri~~~l~~~~~~~~~~~-~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~g 389 (592)
T PRK10790 313 VAGERVFELMDGPRQQYGNDD-RPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMG 389 (592)
T ss_pred HHHHHHHHHhcCCCccCCCCc-cCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 999999999976543211111 1112346999999999973 4679999999999999999999999999999999999
Q ss_pred CCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCccc
Q 000774 336 ELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTE 403 (1293)
Q Consensus 336 ~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ 403 (1293)
+++|++|... .+++.|+||||+|++|++||+|||.++++.++++++++++.++++++++.+|+|++|.
T Consensus 390 l~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~ 469 (592)
T PRK10790 390 YYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTP 469 (592)
T ss_pred ccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhcccccccc
Confidence 9999998431 1356799999999999999999999998888999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEe
Q 000774 404 IGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVH 483 (1293)
Q Consensus 404 ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~ 483 (1293)
+|++|.+||||||||++|||||+++|+|+|||||||+||+++++.+.+.+.+ ..+++|+|+||||++.++.||+|++|+
T Consensus 470 i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~-~~~~~tvIivtHr~~~l~~~D~ii~l~ 548 (592)
T PRK10790 470 LGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAA-VREHTTLVVIAHRLSTIVEADTILVLH 548 (592)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHH-HhCCCEEEEEecchHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999876644 456799999999999999999999999
Q ss_pred CCeEEEecChHHHhhccHHHHHHHHHhc
Q 000774 484 EGMVKEEGTFEDLSNNGELFQKLMENAG 511 (1293)
Q Consensus 484 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 511 (1293)
+|++++.|+|+++++.++.|++++..+.
T Consensus 549 ~G~i~~~G~~~~L~~~~~~y~~l~~~~~ 576 (592)
T PRK10790 549 RGQAVEQGTHQQLLAAQGRYWQMYQLQL 576 (592)
T ss_pred CCEEEEEcCHHHHHhCCCHHHHHHHHHh
Confidence 9999999999999999999999987653
No 56
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-67 Score=660.37 Aligned_cols=199 Identities=23% Similarity=0.381 Sum_probs=164.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++||+++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.+++. .++|
T Consensus 312 ~l~~~~l~~~y~~~--~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGDR--IILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 58999999999753 6999999999999999999999999999999999999999999999741 2699
Q ss_pred EEcccc--cccc-ccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSP--VLFS-GTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~--~lf~-~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+||++ .++. .|+.+++.... ...+.++ .+++..+ ++. .........|||||||||+|||+|+.
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~L~~~--~l~~~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKL---------RDYLGGF--GFQGDKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHH---------HHHHHHc--CCChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 999985 2433 37777653211 1112223 3344443 332 23455667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEe-eecChhhhhh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELLS 1132 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~-~~g~~~el~~ 1132 (1293)
+|+||||||||++||+.+.+.+.+.|+++ ++|||+||||++++.. ||+|++|++|+++ ..|+++++.+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999985 5699999999999987 9999999999997 6799999853
No 57
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.2e-66 Score=643.86 Aligned_cols=508 Identities=23% Similarity=0.298 Sum_probs=398.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 588 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYN-TI--YSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 664 (1293)
Q Consensus 588 ~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 664 (1293)
+++.+++.++...+.+..|+.++..+|....... ...+. .+ +.++.++..++.++..++....+.+...++|.+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 93 (529)
T TIGR02868 15 LVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVY 93 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666667777777766654321111 11111 11 12244556677788888888889999999999999
Q ss_pred HHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000774 665 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYA-AYLY 743 (1293)
Q Consensus 665 ~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~ 743 (1293)
++++++|..+|+++++|++++|+++|++.++..+...+..++..+..++..++++++++|.+.++++..++++.. ...+
T Consensus 94 ~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~ 173 (529)
T TIGR02868 94 DRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLV 173 (529)
T ss_pred HHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888888888888888888888888888776665544333332 2233
Q ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 744 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW 823 (1293)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1293)
+.+..++..+......+.+.+++.|.++|+++||+|+.++.+.+++.+..+...+..........+......++..+..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (529)
T TIGR02868 174 SLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVL 253 (529)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34433444444455667888999999999999999999999998888887777666655544444444333333333222
Q ss_pred HHHHHH--HHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCC
Q 000774 824 LTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 901 (1293)
Q Consensus 824 ~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~ 901 (1293)
++.++. .+..+..+ .+.+..++.+...+..++..+......+.....+.+|+.++++.+++.+... ...+..
T Consensus 254 ~~~~~g~~~~~~g~~t-----~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~ 327 (529)
T TIGR02868 254 GALWAGGPAVADGTLA-----PATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV-VPAAGA 327 (529)
T ss_pred HHHHHHHHHHhCCCCC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC-CCCCcc
Confidence 222221 12344444 4455566666677778888888888899999999999999998665432111 110111
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
..+..+.|+++||+|+|+++ +++|+|+||+|+|||++||+||||||||||+++|+|+++|++|+|.+||+|++++ .++
T Consensus 328 ~~~~~~~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~ 405 (529)
T TIGR02868 328 LGLGKPTLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDE 405 (529)
T ss_pred cCCCCceEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHH
Confidence 12234569999999999754 3699999999999999999999999999999999999999999999999999999 999
Q ss_pred HhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+|++|+||||+|.+|++||+|||.++. +.++++++++++.+++++++.++|+|+||.++++|.+||||||||++||||+
T Consensus 406 lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARal 485 (529)
T TIGR02868 406 LRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARAL 485 (529)
T ss_pred HHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999764 5689999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCc
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1104 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~ 1104 (1293)
+++|+|||||||||+||+++++.|++.|++..+++|+|+||||+
T Consensus 486 l~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 486 LADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999988899999999995
No 58
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.2e-65 Score=643.53 Aligned_cols=549 Identities=25% Similarity=0.371 Sum_probs=436.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCC-Cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 587 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPL-FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 664 (1293)
Q Consensus 587 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 664 (1293)
.+.+.+++.++...+....|+.+....|....... ... ....++.++.+...++.+++.++....+.+....+|..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 98 (576)
T TIGR02204 19 RVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVF 98 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556667777777778777777665321111 111 1222333444455666778888888899999999999999
Q ss_pred HHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 665 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 744 (1293)
Q Consensus 665 ~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 744 (1293)
+++++.|..+|+..+.|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+.++++..+++.+.+...+
T Consensus 99 ~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~ 178 (576)
T TIGR02204 99 AHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLF 178 (576)
T ss_pred HHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888777787788888888888888888877666555544444445555
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 745 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 824 (1293)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1293)
.+..++..+..........+.+.|.++|+++||+++.++.+.+++.+..+...+..........+......++..+...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (576)
T TIGR02204 179 GRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVG 258 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556666667777889999999999999999999998888888777766655544444444443333322222111
Q ss_pred HHH--HHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCC
Q 000774 825 TAT--FAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 902 (1293)
Q Consensus 825 ~~~--~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~ 902 (1293)
... ...+..+..+ .+.+..+..+...+..++..+...+..+.....+.+|+.++++.+++.+...+. ....
T Consensus 259 ~~~~g~~~v~~g~lt-----~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~--~~~~ 331 (576)
T TIGR02204 259 VLWVGAHDVIAGKMS-----AGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHP--KTLP 331 (576)
T ss_pred HHHHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCC--ccCC
Confidence 111 1122344444 455556666777788889999999999999999999999998765542111101 1111
Q ss_pred CCCCccEEEEEEEEEecCCC-CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 903 WPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 903 ~~~~g~i~~~~v~~~y~~~~-~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
++..+.|+++||+|+|+++. +++|+|+||+++|||+++|+|+||||||||+++|+|+++|++|+|.+||.|++++++.+
T Consensus 332 ~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~ 411 (576)
T TIGR02204 332 VPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAE 411 (576)
T ss_pred cCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHH
Confidence 22345699999999997532 46999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+|++|+|+||+|.+|++|++|||.++. +.++++++++++.+++.++++++|.|+++.+++.|.+||||||||++||||+
T Consensus 412 ~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal 491 (576)
T TIGR02204 412 LRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAI 491 (576)
T ss_pred HHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999998754 4578999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHH
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1140 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 1140 (1293)
+++|++||||||||+||+++++.+++.|++..+++|+|+||||++.+..||+|++|++|++++.|+|++++++ ++.|++
T Consensus 492 ~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~ 570 (576)
T TIGR02204 492 LKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYAR 570 (576)
T ss_pred HhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHH
Confidence 9999999999999999999999999999998889999999999999999999999999999999999999874 566777
Q ss_pred HHH
Q 000774 1141 MVQ 1143 (1293)
Q Consensus 1141 l~~ 1143 (1293)
++.
T Consensus 571 l~~ 573 (576)
T TIGR02204 571 LAR 573 (576)
T ss_pred HHh
Confidence 664
No 59
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.3e-68 Score=637.40 Aligned_cols=487 Identities=25% Similarity=0.343 Sum_probs=339.5
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeecC-cEEEEcCCcccc-
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG-TVAYVPQVSWIF- 361 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~~-~i~~v~Q~~~l~- 361 (1293)
.|.++|++++|+ ++++|+|+||++.+|+++||||+|||||||||++|+|...|++|.+....+ +|+|++|++.+.
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 589999999995 579999999999999999999999999999999999999999995444443 799999999997
Q ss_pred CccHHHHHccCCCCC---HHHHHHHHH------------------H---cCChhHHhc-CCCCCcccccCCCCCCChHHH
Q 000774 362 NATVRDNILFGSAFE---PARYEKAID------------------V---TSLQHDLDL-LPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 362 ~~Tv~eni~~g~~~~---~~~~~~~~~------------------~---~~l~~~~~~-l~~g~~t~ig~~g~~LSGGqk 416 (1293)
..||.+.+..+...- ..+++.+.. . ..++..+.. +.+-..+.......+||||||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~~~~~~~LSGG~r 159 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDEDRPVSSLSGGWR 159 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcccCchhhcCHHHH
Confidence 569999998763210 011111110 0 000111111 111111111345578999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEE-EecChH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVK-EEGTFE 494 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~-~~g~~~ 494 (1293)
.|++|||||+.+||+|||||||||||.++..|+.+.+.+ .+| |+|+||||++||+. |++|+.++.|++. +.|+++
T Consensus 160 ~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~--~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~ 236 (530)
T COG0488 160 RRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR--YPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYS 236 (530)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCHH
Confidence 999999999999999999999999999999999987753 345 99999999999997 6999999999875 477777
Q ss_pred HHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHH
Q 000774 495 DLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKV 574 (1293)
Q Consensus 495 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 574 (1293)
.+.+....-..........
T Consensus 237 ~~~~~r~~~~~~~~~~~~~------------------------------------------------------------- 255 (530)
T COG0488 237 SYLEQKAERLRQEAAAYEK------------------------------------------------------------- 255 (530)
T ss_pred HHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 7654432211100000000
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 575 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLY 654 (1293)
Q Consensus 575 ~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 654 (1293)
T Consensus 256 -------------------------------------------------------------------------------- 255 (530)
T COG0488 256 -------------------------------------------------------------------------------- 255 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 655 AAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLL 734 (1293)
Q Consensus 655 ~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1293)
T Consensus 256 -------------------------------------------------------------------------------- 255 (530)
T COG0488 256 -------------------------------------------------------------------------------- 255 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 735 LLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL 814 (1293)
Q Consensus 735 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1293)
..++ ..+..++++....-+.-
T Consensus 256 ------------~~~~------------~~~~~~~i~r~~~~~~~----------------------------------- 276 (530)
T COG0488 256 ------------QQKE------------LAKEQEWIRRGKAAASK----------------------------------- 276 (530)
T ss_pred ------------HHHH------------HHHHHHHHHHHHhccch-----------------------------------
Confidence 0000 00000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcCCCCCcc
Q 000774 815 EIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNY--IELPSEAPL 892 (1293)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~--~~~~~e~~~ 892 (1293)
....+......+++.+. ...+.....
T Consensus 277 ----------------------------------------------------~k~a~sr~k~l~k~~~~~~~~~~~~~~~ 304 (530)
T COG0488 277 ----------------------------------------------------AKKAKSRIKRLEKLEARLAEERPVEEGK 304 (530)
T ss_pred ----------------------------------------------------HHHHHHHHHHHHHHHhhhhhcccccccc
Confidence 00000000111111110 000110000
Q ss_pred ccCCCCCCCC-CCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECC
Q 000774 893 VIESNRPPPG-WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDG 971 (1293)
Q Consensus 893 ~~~~~~~~~~-~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g 971 (1293)
...-..+++. ...+..++++|++++|+++ +++++++||.|.+|+++||+||||+|||||+|+|.|...|.+|+|.++-
T Consensus 305 ~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~ 383 (530)
T COG0488 305 PLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE 383 (530)
T ss_pred cceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC
Confidence 0000001111 1123458999999999764 4799999999999999999999999999999999999999999999872
Q ss_pred eecCCCChHHHhhhceEEccccc-ccc-ccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCCh
Q 000774 972 FDIAKFGLMDLRKILGIIPQSPV-LFS-GTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 1048 (1293)
Q Consensus 972 ~~i~~~~~~~~r~~i~~v~Q~~~-lf~-~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSg 1048 (1293)
. -+|||++|+.. ++. .|+.+++.... ...+.+++..|.+.++. -+.. ......|||
T Consensus 384 ~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~---------~~~~-~~~v~~LSG 442 (530)
T COG0488 384 T-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFT---------GEDQ-EKPVGVLSG 442 (530)
T ss_pred c-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCC---------hHHH-hCchhhcCH
Confidence 1 36999999983 443 38888886443 22355566555554432 2222 445567999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeee-cC
Q 000774 1049 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY-DT 1126 (1293)
Q Consensus 1049 Gqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~-g~ 1126 (1293)
|||.||.||+.++.+|++||||||||+||.++.+.+.++|.+ .++|||+||||.++++. |++++++++ ++..+ |+
T Consensus 443 GEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~--f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~ 519 (530)
T COG0488 443 GEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLD--FEGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGG 519 (530)
T ss_pred hHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCC
Confidence 999999999999999999999999999999999999999998 68999999999999998 999999999 77777 89
Q ss_pred hhhhhhc
Q 000774 1127 PEELLSN 1133 (1293)
Q Consensus 1127 ~~el~~~ 1133 (1293)
++++.+.
T Consensus 520 y~~y~~~ 526 (530)
T COG0488 520 YEDYLEQ 526 (530)
T ss_pred HHHHHHh
Confidence 9888754
No 60
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-65 Score=641.68 Aligned_cols=506 Identities=21% Similarity=0.280 Sum_probs=403.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHH
Q 000774 628 TIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMG 707 (1293)
Q Consensus 628 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~ 707 (1293)
.++.++.++..++.++..++....+.+...++|.+++++++++|+.+|+++++|++++|+++|++.+...+...+..++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~ 119 (569)
T PRK10789 40 GTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVD 119 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33444445566677777888888899999999999999999999999999999999999999999998766666666666
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHH
Q 000774 708 QVSQLLSTFVLI-GIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMA 786 (1293)
Q Consensus 708 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~ 786 (1293)
.++..+..++++ ++++|.+.++++..+++.+.+...+.+..++..+......+.+.+.+.|.++|++++|+|+.++++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~ 199 (569)
T PRK10789 120 SLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQS 199 (569)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHH
Confidence 555444444444 4677766555544444444444444444444444455566778899999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000774 787 DINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL--TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVL 864 (1293)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~ 864 (1293)
+++.+..+...+..........+..........+..++ ......+..+..+ .+.+..++.+...+..++..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt-----~g~l~a~~~~~~~~~~pl~~l~ 274 (569)
T PRK10789 200 ALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLT-----LGQLTSFVMYLGLMIWPMLALA 274 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcC-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777666655554443333333222222221111 1111223344444 4445555666667777888888
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcC
Q 000774 865 RLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGR 944 (1293)
Q Consensus 865 ~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~ 944 (1293)
.....+.....+.+|+.++.+.+++.+.. ..+. .+..+.|+++||+|+|++..+++|+|+||+++|||++||+||
T Consensus 275 ~~~~~~~~~~~a~~ri~~ll~~~~~~~~~---~~~~--~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~ 349 (569)
T PRK10789 275 WMFNIVERGSAAYSRIRAMLAEAPVVKDG---SEPV--PEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGP 349 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCC---CCCC--CCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECC
Confidence 88888999999999999998765442111 0011 112356999999999975445799999999999999999999
Q ss_pred CCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhh
Q 000774 945 TGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAH 1023 (1293)
Q Consensus 945 ~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~ 1023 (1293)
||||||||+++|+|+++|++|+|.+||.++.++++..+|++|+|+||+|.+|++|++|||.++. +.++++++++++.++
T Consensus 350 sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~ 429 (569)
T PRK10789 350 TGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLAS 429 (569)
T ss_pred CCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999998764 468899999999999
Q ss_pred HHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecC
Q 000774 1024 LKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHR 1103 (1293)
Q Consensus 1024 l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~ 1103 (1293)
+++++.++|+|++|.+++.|.+||||||||++||||++++|+||||||||++||+++++.+++.|++..+++|+|+||||
T Consensus 430 l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~ 509 (569)
T PRK10789 430 VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHR 509 (569)
T ss_pred CHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998788999999999
Q ss_pred cchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHh
Q 000774 1104 LNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1104 ~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~ 1144 (1293)
++.+..||+|++|++|++++.|+|++++++ .+.|++++..
T Consensus 510 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~ 549 (569)
T PRK10789 510 LSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRY 549 (569)
T ss_pred hhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHH
Confidence 999999999999999999999999999975 4678887764
No 61
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.3e-65 Score=645.24 Aligned_cols=491 Identities=24% Similarity=0.323 Sum_probs=423.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000774 17 IFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAP 95 (1293)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~ 95 (1293)
++++.++..++.....+...+.+.++...+|..+|+++++.+..++++.+.|++.+++++|++.++.++ ..+..++...
T Consensus 60 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~ 139 (571)
T TIGR02203 60 VIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRET 139 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666666667788999999999999999999999999999999999999999999999865 4566777777
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHH
Q 000774 96 FRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKV 175 (1293)
Q Consensus 96 ~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~ 175 (1293)
+.++++++++++..++++++.++++++++.+..++.++.++..++..+..++..+.+.|.++|+++||.++.++.+.+++
T Consensus 140 ~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~ 219 (571)
T TIGR02203 140 LTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRF 219 (571)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHH
Confidence 77888888888888888888888888888888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 176 QNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVN 253 (1293)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~ 253 (1293)
++..++..+...+..........+...+.. .+.++++|++.+..|.+|+|.+++++.++..+..|+..+...+..+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~ 299 (571)
T TIGR02203 220 DAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQR 299 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887777666655555554444443332 234556778888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHH
Q 000774 254 ANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAM 333 (1293)
Q Consensus 254 ~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l 333 (1293)
++++++|+.++++.+++......+..+....|+++||+|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|
T Consensus 300 ~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL 378 (571)
T TIGR02203 300 GLAAAESLFTLLDSPPEKDTGTRAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLI 378 (571)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999999986554321111111223469999999999743 56899999999999999999999999999999999
Q ss_pred hcCCCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCC--CCCHHHHHHHHHHcCChhHHhcCCCC
Q 000774 334 LGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGS--AFEPARYEKAIDVTSLQHDLDLLPGG 399 (1293)
Q Consensus 334 ~g~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~--~~~~~~~~~~~~~~~l~~~~~~l~~g 399 (1293)
+|+++|++|.... +++.|+||||+|++|++|++|||.+++ +.++++++++++.+++++++..+|+|
T Consensus 379 ~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~g 458 (571)
T TIGR02203 379 PRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLG 458 (571)
T ss_pred HhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCc
Confidence 9999999984321 345799999999999999999999986 47889999999999999999999999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeE
Q 000774 400 DVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRI 479 (1293)
Q Consensus 400 ~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i 479 (1293)
++|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.+.+ ..+++|+|+||||.+.++.||+|
T Consensus 459 ldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~-~~~~~tiIiitH~~~~~~~~D~i 537 (571)
T TIGR02203 459 LDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALER-LMQGRTTLVIAHRLSTIEKADRI 537 (571)
T ss_pred ccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHH-HhCCCEEEEEehhhHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999886654 45789999999999999999999
Q ss_pred EEEeCCeEEEecChHHHhhccHHHHHHHHH
Q 000774 480 ILVHEGMVKEEGTFEDLSNNGELFQKLMEN 509 (1293)
Q Consensus 480 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 509 (1293)
++|++|++++.|+|+++++..+.|++++..
T Consensus 538 i~l~~g~i~~~g~~~~l~~~~~~~~~~~~~ 567 (571)
T TIGR02203 538 VVMDDGRIVERGTHNELLARNGLYAQLHNM 567 (571)
T ss_pred EEEeCCEEEeeCCHHHHHHcCCHHHHHHHH
Confidence 999999999999999999888888887653
No 62
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.1e-65 Score=639.48 Aligned_cols=495 Identities=20% Similarity=0.296 Sum_probs=410.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000774 14 AFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLW 92 (1293)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~ 92 (1293)
+++++++.++..++.+...+...+.+.++...+|..+|+|+++++..++.+.++|++++++++|++.++..+ ..+..++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~ 118 (569)
T PRK10789 39 IGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLV 118 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 333444445555666555666778899999999999999999999999999999999999999999998754 3455555
Q ss_pred HHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000774 93 SAPFRIIISLVLL-YNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSF 171 (1293)
Q Consensus 93 ~~~~~~i~~~~~l-~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~ 171 (1293)
..++.++++++++ +...|.++++.++++++++.+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~ 198 (569)
T PRK10789 119 DSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQ 198 (569)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHH
Confidence 5545544454444 356666777777777777767777778888888888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 172 QSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMIT 249 (1293)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~ 249 (1293)
.+++.+..++..+...+..........+...+.. .+.++++|++.+..|.+|+|.+++++.+...+..|+..++..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~ 278 (569)
T PRK10789 199 SALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFN 278 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887776666655554444443333332222 23345677888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHH
Q 000774 250 QVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSL 329 (1293)
Q Consensus 250 ~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTL 329 (1293)
.+..+..+++||.++++.+++........+.....|+++|++|+|+. .++++|+|+||++++|++++|+||||||||||
T Consensus 279 ~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~I~~~~v~~~y~~-~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL 357 (569)
T PRK10789 279 IVERGSAAYSRIRAMLAEAPVVKDGSEPVPEGRGELDVNIRQFTYPQ-TDHPALENVNFTLKPGQMLGICGPTGSGKSTL 357 (569)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCcEEEEEEEEECCC-CCCccccCeeEEECCCCEEEEECCCCCCHHHH
Confidence 99999999999999998654321111111112346999999999974 34689999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCC-CCCHHHHHHHHHHcCChhHHhcC
Q 000774 330 ISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGS-AFEPARYEKAIDVTSLQHDLDLL 396 (1293)
Q Consensus 330 l~~l~g~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~-~~~~~~~~~~~~~~~l~~~~~~l 396 (1293)
+++|+|+++|++|.... +++.|+||+|+|++|++|++|||.++. +.++++++++++.+++.+++..+
T Consensus 358 l~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~l 437 (569)
T PRK10789 358 LSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRL 437 (569)
T ss_pred HHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhC
Confidence 99999999999984321 245799999999999999999999985 46788999999999999999999
Q ss_pred CCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhC
Q 000774 397 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV 476 (1293)
Q Consensus 397 ~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~ 476 (1293)
|+|++|.+|++|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.+.+ ..+++|+|+||||++.++.|
T Consensus 438 p~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~-~~~~~tii~itH~~~~~~~~ 516 (569)
T PRK10789 438 PQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQ-WGEGRTVIISAHRLSALTEA 516 (569)
T ss_pred cCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHH-HhCCCEEEEEecchhHHHcC
Confidence 99999999999999999999999999999999999999999999999999999987654 45789999999999999999
Q ss_pred CeEEEEeCCeEEEecChHHHhhccHHHHHHHHHh
Q 000774 477 DRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 510 (1293)
Q Consensus 477 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 510 (1293)
|+|++|++|++++.|+|++++++.+.|++++..+
T Consensus 517 d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 517 SEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred CEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 9999999999999999999999999999988754
No 63
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-67 Score=649.76 Aligned_cols=436 Identities=21% Similarity=0.332 Sum_probs=330.6
Q ss_pred EEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCcEEE
Q 000774 287 IRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTVAY 353 (1293)
Q Consensus 287 ~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~i~~ 353 (1293)
++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..++|
T Consensus 1 ~~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 368999996 357999999999999999999999999999999999999999984321 1246999
Q ss_pred EcCCcccc-CccHHHHHccCCC------CCHH----HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 354 VPQVSWIF-NATVRDNILFGSA------FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~~------~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
++|++.++ ..||+||+.++.. .+.. +..++++..++.. .......+|||||||||+||
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGq~qrv~lA 146 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDI-----------DPRAKVATLSVSQMQMIEIA 146 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHHHHHHHHH
Confidence 99999775 6799999987631 1111 2233333333321 22344578999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhccH
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGE 501 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 501 (1293)
|||+.+|++|||||||++||+.+.+++++.+.+...+|+|+|+|||+++++.. ||+|++|++|++++.|+.+++....
T Consensus 147 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~- 225 (491)
T PRK10982 147 KAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMDK- 225 (491)
T ss_pred HHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHHH-
Confidence 99999999999999999999999999998766555568999999999999864 8999999999999877654321000
Q ss_pred HHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHHHHHHH
Q 000774 502 LFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDA 581 (1293)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~ 581 (1293)
.. .
T Consensus 226 ----~~------------------------------------------------------------------------~- 228 (491)
T PRK10982 226 ----II------------------------------------------------------------------------A- 228 (491)
T ss_pred ----HH------------------------------------------------------------------------H-
Confidence 00 0
Q ss_pred hchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 582 LGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 661 (1293)
Q Consensus 582 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 661 (1293)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 662 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAY 741 (1293)
Q Consensus 662 ~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 741 (1293)
++
T Consensus 229 ------------------------~~------------------------------------------------------ 230 (491)
T PRK10982 229 ------------------------MM------------------------------------------------------ 230 (491)
T ss_pred ------------------------HH------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 742 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 821 (1293)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1293)
+
T Consensus 231 --~----------------------------------------------------------------------------- 231 (491)
T PRK10982 231 --V----------------------------------------------------------------------------- 231 (491)
T ss_pred --h-----------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCC
Q 000774 822 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 901 (1293)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~ 901 (1293)
+. . . .+ ..+... . +
T Consensus 232 ------------~~-~---------------------~------------------~~-----~~~~~~-----~--~-- 245 (491)
T PRK10982 232 ------------GR-S---------------------L------------------TQ-----RFPDKE-----N--K-- 245 (491)
T ss_pred ------------CC-C---------------------c------------------cc-----cccccc-----C--C--
Confidence 00 0 0 00 000000 0 0
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
+.+..|+++|++++| +++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.++|.++...++..
T Consensus 246 --~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 319 (491)
T PRK10982 246 --PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANE 319 (491)
T ss_pred --CCCcEEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHH
Confidence 011248999999974 25899999999999999999999999999999999999999999999999998766543
Q ss_pred -HhhhceEEccccc---ccc-ccHhhhc-----CCCCC----CCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCC
Q 000774 982 -LRKILGIIPQSPV---LFS-GTVRFNL-----DPFSE----HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENF 1046 (1293)
Q Consensus 982 -~r~~i~~v~Q~~~---lf~-~ti~~nl-----~~~~~----~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~L 1046 (1293)
+++.++|+||++. +|. .|+.+|. ..+.. ....+. ...+.++++.+ ++. ........+|
T Consensus 320 ~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~L 392 (491)
T PRK10982 320 AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRM-----KSDTQWVIDSM--RVKTPGHRTQIGSL 392 (491)
T ss_pred HHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHH-----HHHHHHHHHhc--CccCCCcccccccC
Confidence 4667999999963 565 3776663 21111 011111 12234455554 332 2346667889
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeee
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 1124 (1293)
|||||||++||||++.+|+||||||||+|||+.+.+.+++.|+++. +++|||+|||+++++.. |||+++|++|+++..
T Consensus 393 SgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~ 472 (491)
T PRK10982 393 SGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGI 472 (491)
T ss_pred CcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998864 57999999999999877 999999999999988
Q ss_pred cChhhh
Q 000774 1125 DTPEEL 1130 (1293)
Q Consensus 1125 g~~~el 1130 (1293)
++++++
T Consensus 473 ~~~~~~ 478 (491)
T PRK10982 473 VDTKTT 478 (491)
T ss_pred EccccC
Confidence 776433
No 64
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.7e-66 Score=646.42 Aligned_cols=199 Identities=24% Similarity=0.300 Sum_probs=164.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++ + .+||
T Consensus 324 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i~ 390 (556)
T PRK11819 324 VIEAENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKLA 390 (556)
T ss_pred EEEEEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEEE
Confidence 59999999999753 699999999999999999999999999999999999999999999954 2 1599
Q ss_pred EEcccc-cccc-ccHhhhcCCCCCC-----CHHHHHHHHHHhhHHHHHHHccCCcch-hhhcCCCCCChhHHHHHHHHHH
Q 000774 988 IIPQSP-VLFS-GTVRFNLDPFSEH-----SDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 988 ~v~Q~~-~lf~-~ti~~nl~~~~~~-----~~~~~~~~l~~~~l~~~i~~lp~gl~~-~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
|+||++ .++. .|+++|+.+.... .+.+.. ..++.+ |+.. ..+.....||||||||++||||
T Consensus 391 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~la~a 459 (556)
T PRK11819 391 YVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSR---------AYVGRF--NFKGGDQQKKVGVLSGGERNRLHLAKT 459 (556)
T ss_pred EEeCchhhcCCCCCHHHHHHhhcccccccccHHHHH---------HHHHhC--CCChhHhcCchhhCCHHHHHHHHHHHH
Confidence 999997 5665 4999998643211 111112 233433 4432 3455677899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeC-CeEee-ecChhhhhh
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDS-GRVLE-YDTPEELLS 1132 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~-G~i~~-~g~~~el~~ 1132 (1293)
++.+|++|||||||++||+.+.+.+++.|++. .+|||+|||+++++.. ||+|++|++ |++.+ .|+++++++
T Consensus 460 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~ 533 (556)
T PRK11819 460 LKQGGNVLLLDEPTNDLDVETLRALEEALLEF--PGCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEE 533 (556)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHH
Confidence 99999999999999999999999999999985 3599999999999887 999999985 88874 588888764
No 65
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.7e-67 Score=648.24 Aligned_cols=441 Identities=24% Similarity=0.354 Sum_probs=331.5
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.|+++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 4899999999963 46999999999999999999999999999999999999999985321 01248
Q ss_pred EEEcCCccc--c-------CccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVSWI--F-------NATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~~l--~-------~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
+|++|++.+ + ..|+++|+.++.. ..+++.++++..++.+..+. ...+||||||||++||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALLDR-----------RFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhhhC-----------CcccCCHHHHHHHHHH
Confidence 999998643 2 4699999876421 23456667777776544333 3368999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhccH
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGE 501 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 501 (1293)
|||+.+|++|||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..|+++++.+...
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 227 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQAL 227 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcchh
Confidence 99999999999999999999999999998776655568999999999999865 89999999999999887665432100
Q ss_pred HHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHHHHHHH
Q 000774 502 LFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDA 581 (1293)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~ 581 (1293)
...+...
T Consensus 228 -~~~~~~~------------------------------------------------------------------------ 234 (490)
T PRK10938 228 -VAQLAHS------------------------------------------------------------------------ 234 (490)
T ss_pred -hhhhhhh------------------------------------------------------------------------
Confidence 0000000
Q ss_pred hchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 582 LGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 661 (1293)
Q Consensus 582 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 661 (1293)
T Consensus 235 -------------------------------------------------------------------------------- 234 (490)
T PRK10938 235 -------------------------------------------------------------------------------- 234 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 662 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAY 741 (1293)
Q Consensus 662 ~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 741 (1293)
T Consensus 235 -------------------------------------------------------------------------------- 234 (490)
T PRK10938 235 -------------------------------------------------------------------------------- 234 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 742 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 821 (1293)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1293)
+. +.
T Consensus 235 -------~~-------------------~~-------------------------------------------------- 238 (490)
T PRK10938 235 -------EQ-------------------LE-------------------------------------------------- 238 (490)
T ss_pred -------hc-------------------cC--------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-CccccCCCCCC
Q 000774 822 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSE-APLVIESNRPP 900 (1293)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e-~~~~~~~~~~~ 900 (1293)
.. +.+.. .+.. .. ...
T Consensus 239 ------------------------------------------------------------~~-~~~~~~~~~~-~~-~~~ 255 (490)
T PRK10938 239 ------------------------------------------------------------GV-QLPEPDEPSA-RH-ALP 255 (490)
T ss_pred ------------------------------------------------------------cc-ccCccccccc-cc-ccC
Confidence 00 00000 0000 00 000
Q ss_pred CCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-CcceEEECCeecCC-CC
Q 000774 901 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-ERGRILIDGFDIAK-FG 978 (1293)
Q Consensus 901 ~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-~~G~I~i~g~~i~~-~~ 978 (1293)
.....++++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.++|.++.. .+
T Consensus 256 ---~~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~ 330 (490)
T PRK10938 256 ---ANEPRIVLNNGVVSYNDR--PILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGET 330 (490)
T ss_pred ---CCCceEEEeceEEEECCe--eEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCC
Confidence 011248999999999753 599999999999999999999999999999999998876 69999999987632 23
Q ss_pred hHHHhhhceEEcccccccc---ccHhhhcCC--CC------CCCHHHHHHHHHHhhHHHHHHHccCCcch-hhhcCCCCC
Q 000774 979 LMDLRKILGIIPQSPVLFS---GTVRFNLDP--FS------EHSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENF 1046 (1293)
Q Consensus 979 ~~~~r~~i~~v~Q~~~lf~---~ti~~nl~~--~~------~~~~~~~~~~l~~~~l~~~i~~lp~gl~~-~~~~~~~~L 1046 (1293)
....|++|+|+||++.++. .|+++++.. .. ....+ . ...+.+.++.+ |++. .......+|
T Consensus 331 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~l~~~--~l~~~~~~~~~~~L 402 (490)
T PRK10938 331 IWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDR-Q-----QKLAQQWLDIL--GIDKRTADAPFHSL 402 (490)
T ss_pred HHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHH-H-----HHHHHHHHHHc--CCchhhccCchhhC
Confidence 3456788999999986542 367766532 11 01111 0 11123344442 4544 455666789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-C-cEEEEEecCcchhhc--cCEEEEEeCCeEe
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-S-CTMLIIAHRLNTIID--CDRILLLDSGRVL 1122 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~-~tvi~vtH~~~~~~~--~d~i~vl~~G~i~ 1122 (1293)
|||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ + .|||+|||+++++.. ||++++|++|+++
T Consensus 403 SgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~ 482 (490)
T PRK10938 403 SWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIY 482 (490)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceE
Confidence 99999999999999999999999999999999999999999998753 4 479999999999964 8999999999998
Q ss_pred ee
Q 000774 1123 EY 1124 (1293)
Q Consensus 1123 ~~ 1124 (1293)
+.
T Consensus 483 ~~ 484 (490)
T PRK10938 483 RY 484 (490)
T ss_pred Ee
Confidence 75
No 66
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.8e-65 Score=633.31 Aligned_cols=518 Identities=24% Similarity=0.297 Sum_probs=410.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccCCC-cCCC-Cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 588 VLILLLCYFLTETLRVSSSTWLSYWTDQSS-LKTH-GP-LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 664 (1293)
Q Consensus 588 ~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~-~~~~-~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 664 (1293)
+.+.+++.++...+....|+.+++.+|... .... .. ..+...+.++.++..++.++..++....+.+...++|.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 84 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLL 84 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666677777777887777776542 1111 11 12334455566677788899999999999999999999999
Q ss_pred HHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 665 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 744 (1293)
Q Consensus 665 ~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 744 (1293)
+++++.|..+|++.++|++++|+++|++.+++.+...+..++..++.++..+++++..+|.+.++++..+++...+...+
T Consensus 85 ~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~ 164 (529)
T TIGR02857 85 AAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILI 164 (529)
T ss_pred HHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888777777777777777777788888876655544433333333344
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 745 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 824 (1293)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1293)
.+..++..+......+...+.+.|+++|+++||+|+.++++.+++.+..+...+..........+......++..+..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (529)
T TIGR02857 165 GWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVAL 244 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444555667888999999999999999999999888888777766655554444444444444433322222
Q ss_pred ---HHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCC
Q 000774 825 ---TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 901 (1293)
Q Consensus 825 ---~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~ 901 (1293)
.+.+.+. .+..+ .+.+..++.+...+..++..+......+.....+.+|+.++++.+++... . .+.
T Consensus 245 ~~~~~~~~~~-~g~~t-----~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~---~-~~~- 313 (529)
T TIGR02857 245 VAVYIGFRLL-AGDLD-----LATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG---K-APV- 313 (529)
T ss_pred HHHHHHHHHH-cCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---C-cCC-
Confidence 2222222 44443 34444555666677778888888889999999999999999875432211 1 111
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
..+..+.|+++||+|+|+++.+++|+|+||+|+|||++||+||||||||||+++|+|+++|++|+|.+||.|+++++.++
T Consensus 314 ~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~ 393 (529)
T TIGR02857 314 TAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADS 393 (529)
T ss_pred CCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHH
Confidence 11123469999999999765447999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+|++|+||||+|.+|++||+|||.+.. ..++++++++++.++++++++++|+|+||.+++.|.+||||||||++||||+
T Consensus 394 lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal 473 (529)
T TIGR02857 394 WRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAF 473 (529)
T ss_pred HHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHH
Confidence 999999999999999999999998754 4678999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEE
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLL 1116 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl 1116 (1293)
+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|
T Consensus 474 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 474 LRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999999987899999999999999999999985
No 67
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.9e-65 Score=651.03 Aligned_cols=493 Identities=21% Similarity=0.308 Sum_probs=421.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000774 14 AFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLW 92 (1293)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~ 92 (1293)
+++++++.++..++.....+...+++.++...++..+|+|++++|..++++.++|++++++ +|++.+++++ ..+..++
T Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~ 260 (694)
T TIGR01846 182 ALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVV 260 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 3344445555666777777778889999999999999999999999999999999999999 6999999865 3445555
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHH
Q 000774 93 SAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQ 172 (1293)
Q Consensus 93 ~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~ 172 (1293)
...+.+++.+++++++.++++++.++++++++.+..++.++.++..++..+..++..+.+.|.++|+++||.+|.|+.+.
T Consensus 261 ~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~ 340 (694)
T TIGR01846 261 LDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQ 340 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHH
Confidence 45555555667777888888888887777777777788888888888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 173 SKVQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQ 250 (1293)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~ 250 (1293)
+++.+..++..+...+..........+...+.. .+.++++|++.+..|.+|+|.++++..+...+..|+..+...+..
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~ 420 (694)
T TIGR01846 341 NRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQD 420 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888777766666665555544444332 234566788888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCCCC-CCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHH
Q 000774 251 VVNANVSLKRMEEFLLAEEKILLPNP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSL 329 (1293)
Q Consensus 251 ~~~~~~s~~Ri~~~l~~~~~~~~~~~-~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTL 329 (1293)
++++..+++|+.++++.+++...... ..+.....|+++||+|+|++ +++++|+|+||+|++||++||+|+||||||||
T Consensus 421 ~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~~i~~~~vsf~y~~-~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL 499 (694)
T TIGR01846 421 FQQTGIALERLGDILNSPTEPRSAGLAALPELRGAITFENIRFRYAP-DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTL 499 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCeEEEEEEEEEcCC-CCccccccceEEECCCCEEEEECCCCCCHHHH
Confidence 99999999999999987654321111 11122346999999999974 34679999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcC
Q 000774 330 ISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLL 396 (1293)
Q Consensus 330 l~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l 396 (1293)
+++|+|+++|++|... .+|+.|+||||++++|++||+|||.++.+ .++++++++++.+++.++++.+
T Consensus 500 ~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~l 579 (694)
T TIGR01846 500 TKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISEL 579 (694)
T ss_pred HHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhC
Confidence 9999999999998432 13557999999999999999999999864 6788999999999999999999
Q ss_pred CCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhC
Q 000774 397 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV 476 (1293)
Q Consensus 397 ~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~ 476 (1293)
|+|++|.+|++|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.+.+ ..+++|+|+||||++.++.|
T Consensus 580 p~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~-~~~~~t~i~itH~~~~~~~~ 658 (694)
T TIGR01846 580 PQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMRE-ICRGRTVIIIAHRLSTVRAC 658 (694)
T ss_pred cCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHH-HhCCCEEEEEeCChHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999987654 45789999999999999999
Q ss_pred CeEEEEeCCeEEEecChHHHhhccHHHHHHHHH
Q 000774 477 DRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 509 (1293)
Q Consensus 477 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 509 (1293)
|+|++|++|++++.|+|+++++.++.|++++..
T Consensus 659 d~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~ 691 (694)
T TIGR01846 659 DRIIVLEKGQIAESGRHEELLALQGLYARLWQQ 691 (694)
T ss_pred CEEEEEeCCEEEEeCCHHHHHHcCChHHHHHHh
Confidence 999999999999999999999999999998764
No 68
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.2e-66 Score=642.90 Aligned_cols=481 Identities=22% Similarity=0.261 Sum_probs=331.0
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-ecCcEEEEcCCcccc-
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-IRGTVAYVPQVSWIF- 361 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-~~~~i~~v~Q~~~l~- 361 (1293)
.++++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|.... .+..||||+|+++++
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5899999999962 357999999999999999999999999999999999999999995433 234699999999987
Q ss_pred CccHHHHHccCCCC------------------CH---------HHHHHHHHHcCChh-------HHhcCCCCCcccccCC
Q 000774 362 NATVRDNILFGSAF------------------EP---------ARYEKAIDVTSLQH-------DLDLLPGGDVTEIGER 407 (1293)
Q Consensus 362 ~~Tv~eni~~g~~~------------------~~---------~~~~~~~~~~~l~~-------~~~~l~~g~~t~ig~~ 407 (1293)
+.||+|||.++... .. .++.++++.++..+ .++.+ |.. .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cccCc
Confidence 56999999875210 00 12233333333221 12221 111 12455
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCe
Q 000774 408 GVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 486 (1293)
Q Consensus 408 g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~ 486 (1293)
..+||||||||++|||||+.+|++|||||||++||+.+.+++.+.+.+. ++|+|+|||+++++.. ||+|++|++|+
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~---~~tvIiisHd~~~~~~~~d~v~~l~~g~ 235 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY---PGTVVAVTHDRYFLDNVAGWILELDRGR 235 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC---CCeEEEEeCCHHHHHhhcCeEEEEECCE
Confidence 6799999999999999999999999999999999999999998865432 3699999999999986 79999999999
Q ss_pred EE-EecChHHHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhh
Q 000774 487 VK-EEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEER 565 (1293)
Q Consensus 487 i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1293)
++ ..|+++++.+....-...... +
T Consensus 236 i~~~~g~~~~~~~~~~~~~~~~~~-----~-------------------------------------------------- 260 (552)
T TIGR03719 236 GIPWEGNYSSWLEQKEKRLEQEEK-----E-------------------------------------------------- 260 (552)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHH-----H--------------------------------------------------
Confidence 76 678888765421100000000 0
Q ss_pred hcCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 000774 566 ETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANS 645 (1293)
Q Consensus 566 ~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 645 (1293)
+...-
T Consensus 261 ---------~~~~~------------------------------------------------------------------ 265 (552)
T TIGR03719 261 ---------ESARQ------------------------------------------------------------------ 265 (552)
T ss_pred ---------HHHHH------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 646 YWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTM 725 (1293)
Q Consensus 646 ~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1293)
T Consensus 266 -------------------------------------------------------------------------------- 265 (552)
T TIGR03719 266 -------------------------------------------------------------------------------- 265 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 726 SLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMG 805 (1293)
Q Consensus 726 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1293)
++.++.. +++..... ......
T Consensus 266 -----------------------~~~~~~~------------~~~~~~~~----~~~~~~-------------------- 286 (552)
T TIGR03719 266 -----------------------KALKREL------------EWVRSSPK----ARQAKS-------------------- 286 (552)
T ss_pred -----------------------HHHHHHH------------HHHHhhhh----hHHHHH--------------------
Confidence 0000000 00000000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 000774 806 ANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIE 885 (1293)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~ 885 (1293)
+......++..+. .
T Consensus 287 -----------------------------------------------------------------~~~~~~~~~~~~~-~ 300 (552)
T TIGR03719 287 -----------------------------------------------------------------KARLARYEELLSQ-E 300 (552)
T ss_pred -----------------------------------------------------------------HHHHHHHHhhhhh-c
Confidence 0000000000000 0
Q ss_pred CCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcc
Q 000774 886 LPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 965 (1293)
Q Consensus 886 ~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G 965 (1293)
+...+.......+....+.+..++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|
T Consensus 301 -~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G 377 (552)
T TIGR03719 301 -FQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGDK--LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSG 377 (552)
T ss_pred -ccccCCCceeecCCCCCCCCeEEEEeeEEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCe
Confidence 00000000000000000112359999999999753 699999999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCChHHHhhhceEEccccc-ccc-ccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcch-hh
Q 000774 966 RILIDGFDIAKFGLMDLRKILGIIPQSPV-LFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDA-QV 1039 (1293)
Q Consensus 966 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~-lf~-~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~-~~ 1039 (1293)
+|.+++ + .+|||+||++. ++. .|+++|+..... ....+ ....+.++.+ |+.. ..
T Consensus 378 ~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~ 437 (552)
T TIGR03719 378 TIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKRE-------VPSRAYVGRF--NFKGSDQ 437 (552)
T ss_pred EEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcch-------HHHHHHHHhC--CCChhHh
Confidence 999954 2 16999999973 664 499999864321 11111 0112334443 4432 34
Q ss_pred hcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeC
Q 000774 1040 SEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDS 1118 (1293)
Q Consensus 1040 ~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~ 1118 (1293)
......||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++ ++|||+|||+++++.. ||+|++|++
T Consensus 438 ~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~~viivsHd~~~~~~~~d~i~~l~~ 515 (552)
T TIGR03719 438 QKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF--AGCAVVISHDRWFLDRIATHILAFEG 515 (552)
T ss_pred cCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5566789999999999999999999999999999999999999999999986 3589999999999987 999999996
Q ss_pred -CeEee-ecChhhhhh
Q 000774 1119 -GRVLE-YDTPEELLS 1132 (1293)
Q Consensus 1119 -G~i~~-~g~~~el~~ 1132 (1293)
|++.. .|+++++.+
T Consensus 516 ~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 516 DSHVEWFEGNYSEYEE 531 (552)
T ss_pred CCeEEEeCCCHHHHHH
Confidence 68774 477766653
No 69
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.1e-65 Score=681.61 Aligned_cols=494 Identities=18% Similarity=0.238 Sum_probs=393.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcC--CChhHHHHHHHHHHHHHHHHH-HHHH
Q 000774 13 YAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKN--FASGKITNLMTTDAEQLQQVC-QALH 89 (1293)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~--~~~G~l~~~l~~Dv~~l~~~~-~~l~ 89 (1293)
++++++++.++..++.....+...+++.++...+|..+|+++++++..++++ .++|++++++++|++.++.++ ..+.
T Consensus 868 ~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~ 947 (1466)
T PTZ00265 868 YSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIV 947 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3343444444555556666667778999999999999999999999999975 889999999999999999865 4555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHH
Q 000774 90 TLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLT-KE-----------------GLQRTDKRIGL 151 (1293)
Q Consensus 90 ~~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~ 151 (1293)
.++..++.++++++++++..|.++++.++++ +++..++.++.+... ++ ..+..++....
T Consensus 948 ~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1466)
T PTZ00265 948 IFTHFIVLFLVSMVMSFYFCPIVAAVLTGTY---FIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFL 1024 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHH
Confidence 6666666677777777777666655543222 222333333322211 11 11224556788
Q ss_pred HHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHH
Q 000774 152 MNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFT 229 (1293)
Q Consensus 152 ~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~ 229 (1293)
+.|.++|+++||+|+.|+.+.+++.+..+...+...+.....++...+..++.. .+.++++|++++..|.+++|.+++
T Consensus 1025 ~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~ 1104 (1466)
T PTZ00265 1025 IQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMK 1104 (1466)
T ss_pred HHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 999999999999999999999999988877766666555555554444444333 245567889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCC---CCC---CCCCCCcEEEEeeEEEcCCCCCCCce
Q 000774 230 SLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLP---NPP---LTSGLPAISIRNGYFSWDSKAERPTL 303 (1293)
Q Consensus 230 ~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~---~~~---~~~~~~~i~~~~~~~~y~~~~~~~~l 303 (1293)
++.++.....++..+...+..+.++.++++|+.++++.+++.... ... .......|+|+||+|+|++++++++|
T Consensus 1105 ~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL 1184 (1466)
T PTZ00265 1105 SLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIY 1184 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccc
Confidence 876665555678889999999999999999999999865432111 110 01112469999999999854456899
Q ss_pred eceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCC--------------------------------------------
Q 000774 304 LNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-------------------------------------------- 339 (1293)
Q Consensus 304 ~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~-------------------------------------------- 339 (1293)
+|+||+|++|+++|||||||||||||+++|+|+|+|
T Consensus 1185 ~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 (1466)
T PTZ00265 1185 KDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEG 1264 (1466)
T ss_pred cCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999998
Q ss_pred ----------CCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcC
Q 000774 340 ----------VSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLL 396 (1293)
Q Consensus 340 ----------~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l 396 (1293)
++|.+. .+|+.||||||+|+||++||+|||.+|.+ .++++++++++.+++++++..+
T Consensus 1265 ~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~L 1344 (1466)
T PTZ00265 1265 GSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESL 1344 (1466)
T ss_pred ccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhC
Confidence 355321 14667999999999999999999999964 6789999999999999999999
Q ss_pred CCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchhhh
Q 000774 397 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ 475 (1293)
Q Consensus 397 ~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l~~ 475 (1293)
|+|++|.+||+|.+|||||||||||||||+++|+|||||||||+||+++++.|.+.+.+.. .+++|+|+||||++.++.
T Consensus 1345 P~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~ 1424 (1466)
T PTZ00265 1345 PNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKR 1424 (1466)
T ss_pred ccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999988665443 368999999999999999
Q ss_pred CCeEEEEeC----CeEE-EecChHHHhh-ccHHHHHHHHH
Q 000774 476 VDRIILVHE----GMVK-EEGTFEDLSN-NGELFQKLMEN 509 (1293)
Q Consensus 476 ~d~i~~l~~----G~i~-~~g~~~~l~~-~~~~~~~~~~~ 509 (1293)
||+|++|++ |+++ ++|+|+||++ .++.|++++..
T Consensus 1425 aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~ 1464 (1466)
T PTZ00265 1425 SDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKL 1464 (1466)
T ss_pred CCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhh
Confidence 999999999 9955 8999999998 58999998864
No 70
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.8e-64 Score=635.11 Aligned_cols=481 Identities=21% Similarity=0.290 Sum_probs=401.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 000774 27 CEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLL 105 (1293)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~~~~l 105 (1293)
......+...+...+++..++..+|+|++++|..++.+.++|++++++++|++.+...+ ..+..++..++.+++.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (588)
T PRK13657 72 AGVLVARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLA 151 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445567778888889999999999999999999999999999999999998754 34445555555555555666
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHH
Q 000774 106 YNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSW 185 (1293)
Q Consensus 106 ~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~ 185 (1293)
+...++++++.++++++.+.+..++.++.++..++..+..++..+.+.|.++|+++||.|+.++.+.+++.+..++..+.
T Consensus 152 ~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~ 231 (588)
T PRK13657 152 LFMNWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAA 231 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 66677777777777777677777788888888888888999999999999999999999999999888888877776665
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 186 FRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEE 263 (1293)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~ 263 (1293)
..+..........+...+. ..+.++++|++.+..|.+++|.+++++.++..+..|+..+...+..+..+..+++|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~ 311 (588)
T PRK13657 232 QMPVLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFE 311 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444443333333322222 23445667888888999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcccC-CCC-CCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000774 264 FLLAEEKILL-PNP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS 341 (1293)
Q Consensus 264 ~l~~~~~~~~-~~~-~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~ 341 (1293)
+++.+++... +.. ........|+++|++|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++
T Consensus 312 l~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~ 389 (588)
T PRK13657 312 VEDAVPDVRDPPGAIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQS 389 (588)
T ss_pred HhCCCcccCCCCCCCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCC
Confidence 9876443211 111 11112236999999999973 3579999999999999999999999999999999999999999
Q ss_pred CCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCC
Q 000774 342 DASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERG 408 (1293)
Q Consensus 342 g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g 408 (1293)
|... .+++.|+||||+|++|++||+|||.++++ .++++++++++.+++.++++.+|+|++|.+|++|
T Consensus 390 G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g 469 (588)
T PRK13657 390 GRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERG 469 (588)
T ss_pred CEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCC
Confidence 8432 13467999999999999999999999964 6788899999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEE
Q 000774 409 VNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVK 488 (1293)
Q Consensus 409 ~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~ 488 (1293)
.+||||||||++|||||+++|+|+|||||||+||+++++.+++.+.+ ..+++|+|+||||++.++.||+|++|++|+++
T Consensus 470 ~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~ 548 (588)
T PRK13657 470 RQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVV 548 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999887654 44689999999999999999999999999999
Q ss_pred EecChHHHhhccHHHHHHHHHh
Q 000774 489 EEGTFEDLSNNGELFQKLMENA 510 (1293)
Q Consensus 489 ~~g~~~~l~~~~~~~~~~~~~~ 510 (1293)
+.|+|+++++..+.|++++..+
T Consensus 549 ~~g~~~~l~~~~~~y~~l~~~~ 570 (588)
T PRK13657 549 ESGSFDELVARGGRFAALLRAQ 570 (588)
T ss_pred EeCCHHHHHHCCChHHHHHHHh
Confidence 9999999998889999988754
No 71
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.9e-66 Score=650.49 Aligned_cols=203 Identities=21% Similarity=0.325 Sum_probs=166.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++||+++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.+ |.++ .||
T Consensus 319 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDGK--QLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECCe--EEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 48999999999753 6999999999999999999999999999999999999999999998 4322 599
Q ss_pred EEcccc-ccccc-cHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSP-VLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~-~lf~~-ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
|++|++ .++.. |+.+|+..... ...... ...+.+.+..+ ++. .........|||||||||+|||||+.+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgGekqRl~la~al~~~ 458 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGR-----PRHVLGYLQDF--LFHPKRAMTPVKALSGGERNRLLLARLFLKP 458 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccch-----HHHHHHHHHhc--CCCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 999986 46654 99999864221 100000 01123344443 332 234556678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEe-CCeEeee-cChhhhhh
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD-SGRVLEY-DTPEELLS 1132 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~-~G~i~~~-g~~~el~~ 1132 (1293)
|++|||||||++||+.+.+.+.+.|++. ++|||+||||++++.. ||+|++|+ +|++..+ |++++++.
T Consensus 459 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 459 SNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999999999999884 6799999999999977 99999998 8999876 89999864
No 72
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=4.6e-64 Score=631.63 Aligned_cols=489 Identities=24% Similarity=0.350 Sum_probs=410.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000774 20 GVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRI 98 (1293)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~ 98 (1293)
+.++..++.....+...+++.++...+|..+|+|++++|..++++.+.|++++++++|++.+++++ ..+..++...+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~ 146 (576)
T TIGR02204 67 VALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMC 146 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555556666778999999999999999999999999999999999999999999999875 3455656666667
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Q 000774 99 IISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNV 178 (1293)
Q Consensus 99 i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~ 178 (1293)
++++++++...++++++.++.+++.+.+..++.+++++..++..+..++..+.+.|.++|+++||.+++|+.+.+++++.
T Consensus 147 ~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~ 226 (576)
T TIGR02204 147 IGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGA 226 (576)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHH
Confidence 77777777777777777666666666666778888888899999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 179 RNDELSWFRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANV 256 (1293)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~ 256 (1293)
.++..+...+......+...+...+. ..+.++++|++.+..|.+++|.++++..+...+..|+..++..+..+.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~ 306 (576)
T TIGR02204 227 VEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAG 306 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776665554444443333332222 2334456788888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcccCC-CC-C-CCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHH
Q 000774 257 SLKRMEEFLLAEEKILLP-NP-P-LTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAM 333 (1293)
Q Consensus 257 s~~Ri~~~l~~~~~~~~~-~~-~-~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l 333 (1293)
+++|+.++++.+++.... .+ . ..+....|+++||+|+|+++.++++|+|+||+++|||+++|+|+||||||||+++|
T Consensus 307 ~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL 386 (576)
T TIGR02204 307 AAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLL 386 (576)
T ss_pred HHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 999999999865432111 11 0 11112359999999999753346899999999999999999999999999999999
Q ss_pred hcCCCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCC
Q 000774 334 LGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGD 400 (1293)
Q Consensus 334 ~g~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~ 400 (1293)
+|+++|++|.... +++.|+|+||+|++|++||+|||.++.+ .++++++++++.+++.++++.+|+|+
T Consensus 387 ~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl 466 (576)
T TIGR02204 387 LRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGY 466 (576)
T ss_pred HhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCC
Confidence 9999999984321 2457999999999999999999999865 56789999999999999999999999
Q ss_pred cccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEE
Q 000774 401 VTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRII 480 (1293)
Q Consensus 401 ~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~ 480 (1293)
+|.+|++|.+||||||||++||||++++|++||||||||+||+++++.+++.+.+ ..+++|+|+||||++.++.+|+|+
T Consensus 467 ~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~-~~~~~t~IiitH~~~~~~~~d~vi 545 (576)
T TIGR02204 467 DTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALET-LMKGRTTLIIAHRLATVLKADRIV 545 (576)
T ss_pred CceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHH-HhCCCEEEEEecchHHHHhCCEEE
Confidence 9999999999999999999999999999999999999999999999999876654 457899999999999999999999
Q ss_pred EEeCCeEEEecChHHHhhccHHHHHHHHH
Q 000774 481 LVHEGMVKEEGTFEDLSNNGELFQKLMEN 509 (1293)
Q Consensus 481 ~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 509 (1293)
++++|++++.|+|+++.+.++.|++++..
T Consensus 546 ~l~~g~~~~~g~~~~l~~~~~~~~~l~~~ 574 (576)
T TIGR02204 546 VMDQGRIVAQGTHAELIAKGGLYARLARL 574 (576)
T ss_pred EEECCEEEeeecHHHHHHcCChHHHHHhh
Confidence 99999999999999999999989887753
No 73
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.3e-63 Score=624.25 Aligned_cols=485 Identities=19% Similarity=0.269 Sum_probs=406.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000774 23 LGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIIS 101 (1293)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~ 101 (1293)
+..+......+...++..+++..++..+|+|++++|..++++.++|++++++++|++.++.++ ..+..++..++.++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~ 147 (585)
T TIGR01192 68 FNTIAYVLVAREADRLAHGRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLL 147 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555668888899999999999999999999999999999999999999998765 3445555556666666
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHH
Q 000774 102 LVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRND 181 (1293)
Q Consensus 102 ~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~ 181 (1293)
+++++...|.++++.++++++++.+..++.++.++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++.+..++
T Consensus 148 ~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~ 227 (585)
T TIGR01192 148 IPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNN 227 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHH
Confidence 66777788888888777777777777788888888888888889999999999999999999999999998888887776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 182 ELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLK 259 (1293)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~ 259 (1293)
..+...+......+...+...+.. .+.++++|++.+..|.+++|.+++++.++..+..|+..+...+..+..+..+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 307 (585)
T TIGR01192 228 LLSAQYPVLDWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLE 307 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665544444444433333332222 234556788888899999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccCC-CC-CCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCC
Q 000774 260 RMEEFLLAEEKILLP-NP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL 337 (1293)
Q Consensus 260 Ri~~~l~~~~~~~~~-~~-~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~ 337 (1293)
|+.++++.+++.... .+ ..+.....++++|++|+|++ ++++|+|+||+|++||+++|+||||||||||+++|+|++
T Consensus 308 ri~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~ 385 (585)
T TIGR01192 308 DFFDLEDSVFQREEPADAPELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVY 385 (585)
T ss_pred HHHHHHcCCccccCCccCCCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCC
Confidence 999998765432111 11 11112235999999999973 357999999999999999999999999999999999999
Q ss_pred CCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccc
Q 000774 338 PPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEI 404 (1293)
Q Consensus 338 ~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~i 404 (1293)
+|++|.... +++.++||||+|++|++|++|||.++.+ .++++++++++.+++.+++..+|+|++|.+
T Consensus 386 ~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~ 465 (585)
T TIGR01192 386 DPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLV 465 (585)
T ss_pred CCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchh
Confidence 999984321 3457999999999999999999999854 567888999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeC
Q 000774 405 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 484 (1293)
Q Consensus 405 g~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~ 484 (1293)
|++|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.+. ...+++|+|+||||++.++.||+|++|++
T Consensus 466 ~~~~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~-~~~~~~tvI~isH~~~~~~~~d~i~~l~~ 544 (585)
T TIGR01192 466 GERGNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAID-ALRKNRTTFIIAHRLSTVRNADLVLFLDQ 544 (585)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHH-HHhCCCEEEEEEcChHHHHcCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987654 44568999999999999999999999999
Q ss_pred CeEEEecChHHHhhccHHHHHHHHHh
Q 000774 485 GMVKEEGTFEDLSNNGELFQKLMENA 510 (1293)
Q Consensus 485 G~i~~~g~~~~l~~~~~~~~~~~~~~ 510 (1293)
|++++.|+|+++.++++.|++++..+
T Consensus 545 G~i~~~g~~~~l~~~~~~y~~l~~~~ 570 (585)
T TIGR01192 545 GRLIEKGSFQELIQKDGRFYKLLRRS 570 (585)
T ss_pred CEEEEECCHHHHHHCCChHHHHHHhC
Confidence 99999999999999999999988754
No 74
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4.3e-64 Score=624.78 Aligned_cols=447 Identities=22% Similarity=0.273 Sum_probs=372.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000774 20 GVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRI 98 (1293)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~-~l~~~~~~~~~~ 98 (1293)
+.++..++.+...+...+.+.++...+|..+|+|++++|..++++.++|++++++++|++.++..+. .+..++..++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~ 141 (529)
T TIGR02868 62 FGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVG 141 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555556667788899999999999999999999999999999999999999999998664 455566666667
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Q 000774 99 IISLVLLYNELGVASLLGALLLVFMFPVQTFII-SRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQN 177 (1293)
Q Consensus 99 i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~ 177 (1293)
+++++++++..|.++++.++.++++.++..++. +..++..++..+..++..+.+.|.++|+++||.|++|+.+.+++++
T Consensus 142 ~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~ 221 (529)
T TIGR02868 142 SAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEA 221 (529)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHH
Confidence 777777777777777777666555544443443 3445566777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 178 VRNDELSWFRKAQFLAACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNAN 255 (1293)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~ 255 (1293)
..++..+...+..........+...+..+ +.++++|++.+..|.+++|.+++++.+...+..|+..++..+..+.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 301 (529)
T TIGR02868 222 ADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVR 301 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777666666655555444443322 3345667788889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccCCC---C-CCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHH
Q 000774 256 VSLKRMEEFLLAEEKILLPN---P-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLIS 331 (1293)
Q Consensus 256 ~s~~Ri~~~l~~~~~~~~~~---~-~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~ 331 (1293)
.+++|+.++++.+++..... + ...+....|+++||+|+|++ ++++|+|+||+|++||++|||||||||||||++
T Consensus 302 ~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~ 379 (529)
T TIGR02868 302 AAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLM 379 (529)
T ss_pred HHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 99999999997665421111 0 01112246999999999974 357999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCceee------------cCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCC
Q 000774 332 AMLGELPPVSDASAVI------------RGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPG 398 (1293)
Q Consensus 332 ~l~g~~~~~~g~~~~~------------~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~ 398 (1293)
+|+|+++|++|. +.+ |+.|+||||+|++|++||+|||.+|.+ .++++++++++.+++++++..+|+
T Consensus 380 lL~g~~~p~~G~-I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~ 458 (529)
T TIGR02868 380 LLTGLLDPLQGE-VTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPD 458 (529)
T ss_pred HHhcCCCCCCcE-EEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcc
Confidence 999999999994 333 358999999999999999999999865 688999999999999999999999
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCc
Q 000774 399 GDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 470 (1293)
Q Consensus 399 g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~ 470 (1293)
|++|.+||+|.+||||||||++|||||+++|+|||||||||+||+++++.+.+.+. ...+++|+|+||||+
T Consensus 459 GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~-~~~~~~TvIiItHrl 529 (529)
T TIGR02868 459 GLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLL-AALSGKTVVVITHHL 529 (529)
T ss_pred cccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH-HhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999988765 455789999999985
No 75
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.2e-63 Score=617.63 Aligned_cols=527 Identities=18% Similarity=0.219 Sum_probs=406.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 588 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGP--LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLH 665 (1293)
Q Consensus 588 ~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 665 (1293)
++..+++.++...+.+..|+.+...+|......... ..+..++.++.++..++.+++.++....+.+...++|.++++
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 87 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFA 87 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666667777778888877776543211111 123334444555667778888899999999999999999999
Q ss_pred HHHcCCccccccccchhHHHHHhcchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 666 SILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAV-FVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 744 (1293)
Q Consensus 666 ~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 744 (1293)
++++.|+. ..+...+++++|++.++..+.. ....++..++.++ .++++++++|++.++++..+++.+.+..++
T Consensus 88 ~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~ 161 (544)
T TIGR01842 88 ASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLN 161 (544)
T ss_pred HHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 99999984 2366789999999999987765 3444444444333 335566777766554443333333333333
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 000774 745 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL---M 821 (1293)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 821 (1293)
.+..++..+......+...+.+.|.++|+++||+|+.++.+.+++.+..++..+.................++..+ +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (544)
T TIGR01842 162 NRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSL 241 (544)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433444444555667788899999999999999999999988888877776655544433333333322222222 1
Q ss_pred HHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCC
Q 000774 822 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 901 (1293)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~ 901 (1293)
++..+.+ .+..+..+ .+.+..++.+...+..++..+......++....+.+|+.++++.+++.... .+.
T Consensus 242 ~~~~g~~-l~~~g~it-----~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~- 310 (544)
T TIGR01842 242 VLGLGAY-LAIDGEIT-----PGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPL- 310 (544)
T ss_pred HHHHHHH-HHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCC-
Confidence 1222222 23344444 445555666777788888999999999999999999999998765543210 111
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
.+..+.++++||+|+|+++.+++|+|+||+++|||++||+||||||||||+++|+|+++|++|+|.+||.++.+++...
T Consensus 311 -~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 311 -PEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred -CCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 1123569999999999754457999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+|+.++||||+|.+|++|++||+..+++ .++++++++++.++++++++++|+|++|.+++.|.+|||||||||+||||+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARal 469 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARAL 469 (544)
T ss_pred HhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999986544 688999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhh
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+++|++|||||||++||+++++.+.+.|++.. +++|+|+||||++.+..||+|++|++|++++.|+|+|+++
T Consensus 470 l~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 470 YGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred hcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999999875 5799999999999988899999999999999999999975
No 76
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.9e-63 Score=616.85 Aligned_cols=478 Identities=22% Similarity=0.280 Sum_probs=394.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHHH--HHH
Q 000774 13 YAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQA--LHT 90 (1293)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~~--l~~ 90 (1293)
++++++++.++..++.....+...+.+.++...+|..+|+|++++|.. ..+...+++++|++.+++++.. +..
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~ 122 (544)
T TIGR01842 48 LTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFA 122 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHH
Confidence 344455556666777777777788899999999999999999999873 2356788899999999986643 334
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHH
Q 000774 91 LWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENS 170 (1293)
Q Consensus 91 ~~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~ 170 (1293)
++..++.++ .+++++...|+++++.++.+++++.+..+..++.++..++.++..+++.+.+.|.++|+++||.|++|+.
T Consensus 123 ~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~ 201 (544)
T TIGR01842 123 FFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGN 201 (544)
T ss_pred HHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHH
Confidence 444444433 3455667777777776666666666666677777888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 171 FQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMI 248 (1293)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~ 248 (1293)
+.+++++..++..+...+..........+...+.. .+.++++|++.+..|.+|+|.+++++.++..+..|+..+...+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~ 281 (544)
T TIGR01842 202 LTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGW 281 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887776665555444444333333222 2345567888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHH
Q 000774 249 TQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTS 328 (1293)
Q Consensus 249 ~~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKST 328 (1293)
..+.++..+++|+.++++.+++.....+ .+.....++++|++|+|++ .++++|+|+||++++||+++|+|||||||||
T Consensus 282 ~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~~~~~~~i~~~~v~~~y~~-~~~~~l~~~~~~i~~G~~~~ivG~sGsGKST 359 (544)
T TIGR01842 282 KQFSGARQAYKRLNELLANYPSRDPAMP-LPEPEGHLSVENVTIVPPG-GKKPTLRGISFRLQAGEALAIIGPSGSGKST 359 (544)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCC-CCCCCCeEEEEEEEEEcCC-CCccccccceEEEcCCCEEEEECCCCCCHHH
Confidence 9999999999999999976554321111 1122346999999999974 3468999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhc
Q 000774 329 LISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDL 395 (1293)
Q Consensus 329 Ll~~l~g~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~ 395 (1293)
|+++|+|+++|++|.... +++.++||||+|++|++|++|||.++.+ .++++++++++.++++++++.
T Consensus 360 L~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~ 439 (544)
T TIGR01842 360 LARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILR 439 (544)
T ss_pred HHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHh
Confidence 999999999999984321 2457999999999999999999987654 678899999999999999999
Q ss_pred CCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh
Q 000774 396 LPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ 475 (1293)
Q Consensus 396 l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~ 475 (1293)
+|+|++|.+|++|.+||||||||++||||++++|++||||||||+||+++++.+.+.+.+...+++|+|+||||++.++.
T Consensus 440 l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~ 519 (544)
T TIGR01842 440 LPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGC 519 (544)
T ss_pred CccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999988665443468999999999999999
Q ss_pred CCeEEEEeCCeEEEecChHHHhh
Q 000774 476 VDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 476 ~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
||+|++|++|++++.|+|+++.+
T Consensus 520 ~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 520 VDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999998864
No 77
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=4.6e-65 Score=558.81 Aligned_cols=457 Identities=27% Similarity=0.438 Sum_probs=350.1
Q ss_pred CcEEEEeeEEEcCC-CCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCCce-----------
Q 000774 283 PAISIRNGYFSWDS-KAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASA----------- 345 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~-~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~-----~g~~~----------- 345 (1293)
+.++++|++..|.. +....++++|||+|++||.+||||+||||||-..+.++|+++.. +|...
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 46899999988853 23467999999999999999999999999999999999999641 12110
Q ss_pred ----eec-CcEEEEcCCccc-cC--ccHH----HHHccCCCCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCC
Q 000774 346 ----VIR-GTVAYVPQVSWI-FN--ATVR----DNILFGSAFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 409 (1293)
Q Consensus 346 ----~~~-~~i~~v~Q~~~l-~~--~Tv~----eni~~g~~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~ 409 (1293)
.+| ++|++++|+|.- .| -||. |-|......+ .++..+.++.+++.+--.. +....+
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~r--------l~~yPH 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKR--------LDAYPH 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhh--------hhhCCc
Confidence 122 369999999953 22 2544 4444433322 3456667777777543221 223446
Q ss_pred CCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchhhh-CCeEEEEeCCeE
Q 000774 410 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 487 (1293)
Q Consensus 410 ~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i 487 (1293)
+|||||||||.||.||+.+|++||-||||.+||.....+|.+.+.... ..|-.+++||||+..++. ||||+||.+|++
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~i 236 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEI 236 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEE
Confidence 999999999999999999999999999999999999999998655433 348999999999999986 799999999999
Q ss_pred EEecChHHHhhccHH-HHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhh
Q 000774 488 KEEGTFEDLSNNGEL-FQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERE 566 (1293)
Q Consensus 488 ~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1293)
+++|+.+++...... |.++.-+
T Consensus 237 vE~~~t~~lF~~PqHpYTr~Ll~--------------------------------------------------------- 259 (534)
T COG4172 237 VETGTTETLFAAPQHPYTRKLLA--------------------------------------------------------- 259 (534)
T ss_pred eecCcHHHHhhCCCChHHHHHHh---------------------------------------------------------
Confidence 999988776543100 0000000
Q ss_pred cCcccHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 000774 567 TGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSY 646 (1293)
Q Consensus 567 ~g~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 646 (1293)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 647 WLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMS 726 (1293)
Q Consensus 647 ~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (1293)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 727 LWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGA 806 (1293)
Q Consensus 727 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (1293)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 000774 807 NRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL 886 (1293)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~ 886 (1293)
..
T Consensus 260 ------------------------------------------------------------------------------ae 261 (534)
T COG4172 260 ------------------------------------------------------------------------------AE 261 (534)
T ss_pred ------------------------------------------------------------------------------cC
Confidence 00
Q ss_pred CCCCccccCCCCCCCCCCCCccEEEEEEEEEecCC---------CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHh
Q 000774 887 PSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE---------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLF 957 (1293)
Q Consensus 887 ~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~---------~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~ 957 (1293)
|...+ ++........++.+||.+.|+-+ ...++++|||++++||.+||||.||||||||-.+|+
T Consensus 262 P~g~~-------~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~all 334 (534)
T COG4172 262 PSGDP-------PPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALL 334 (534)
T ss_pred CCCCC-------CCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHH
Confidence 11000 00000112247888888888421 124899999999999999999999999999999999
Q ss_pred cCCCCCcceEEECCeecCCCChHH---HhhhceEEccccc--ccc-ccHhhhcC----CCC-CC----CHHHHHHHHHHh
Q 000774 958 RIVELERGRILIDGFDIAKFGLMD---LRKILGIIPQSPV--LFS-GTVRFNLD----PFS-EH----SDADLWEALERA 1022 (1293)
Q Consensus 958 g~~~p~~G~I~i~g~~i~~~~~~~---~r~~i~~v~Q~~~--lf~-~ti~~nl~----~~~-~~----~~~~~~~~l~~~ 1022 (1293)
|+++++ |+|.++|.++...+.+. +|+++-+|+|||+ |-. .||.+-+. ... .. .++.+.+|++.+
T Consensus 335 rL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EV 413 (534)
T COG4172 335 RLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEV 413 (534)
T ss_pred hhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHc
Confidence 999886 99999999999888766 5889999999996 332 37766442 111 12 245577777777
Q ss_pred hHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEE
Q 000774 1023 HLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLII 1100 (1293)
Q Consensus 1023 ~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~v 1100 (1293)
|++.-. .+..++.+|||||||++||||++-+|++++||||||+||..-...|.+.|+++- .+-+-++|
T Consensus 414 GLDp~~----------r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFI 483 (534)
T COG4172 414 GLDPAT----------RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFI 483 (534)
T ss_pred CCChhH----------hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 665422 244567899999999999999999999999999999999999999999998864 46899999
Q ss_pred ecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHHH
Q 000774 1101 AHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1140 (1293)
Q Consensus 1101 tH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 1140 (1293)
|||+..++. ||+|+||.+|+|||+|..+++++++...|.+
T Consensus 484 SHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 484 SHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred eccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 999999988 9999999999999999999999887766664
No 78
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=6.4e-63 Score=614.21 Aligned_cols=468 Identities=22% Similarity=0.283 Sum_probs=386.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH-HHHHH
Q 000774 13 YAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTL 91 (1293)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~-~l~~~ 91 (1293)
+++.+++..++..++.+...+...+++.++...+|..+|+|++++|..++++.++|++++++++|++.+++++. .+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~ 125 (529)
T TIGR02857 46 ALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQL 125 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33344455566667777777788889999999999999999999999999999999999999999999998653 45666
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000774 92 WSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSF 171 (1293)
Q Consensus 92 ~~~~~~~i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~ 171 (1293)
+..++.+++++++++...++++++.++.+++...+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+
T Consensus 126 ~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~ 205 (529)
T TIGR02857 126 VLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQ 205 (529)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHH
Confidence 66666666667777777777777766666655555666777788888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 172 QSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLV--TVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMIT 249 (1293)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~ 249 (1293)
.+++++..++..+...+..+.......+...+..+. .++.++++.+..|.+++|.+++++.+...+..|+..+...+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~ 285 (529)
T TIGR02857 206 AAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYH 285 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988777766655544444444333333322221 222345556668899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHH
Q 000774 250 QVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSL 329 (1293)
Q Consensus 250 ~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTL 329 (1293)
.+.++..+++|+.++++.+++.....+........|+++||+|+|++ .++++|+|+||+|++||+++|+||||||||||
T Consensus 286 ~~~~~~~~~~ri~~ll~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~-~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL 364 (529)
T TIGR02857 286 ARADGVAAAEALFAVLDAPRPLAGKAPVTAAPAPSLEFSGLSVAYPG-RRAPALRPVSFTVPPGERVALVGPSGAGKSTL 364 (529)
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcCCCCCCCCeEEEEEEEEECCC-CCcccccceeEEECCCCEEEEECCCCCCHHHH
Confidence 99999999999999997543321111111112246999999999974 24589999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcC
Q 000774 330 ISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLL 396 (1293)
Q Consensus 330 l~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l 396 (1293)
+++|+|+++|++|... .+++.|+||+|+|++|++||+|||.++.+ .++++++++++.+++.++++.+
T Consensus 365 ~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~l 444 (529)
T TIGR02857 365 LNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAAL 444 (529)
T ss_pred HHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhC
Confidence 9999999999998432 13457999999999999999999999864 5778999999999999999999
Q ss_pred CCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhC
Q 000774 397 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV 476 (1293)
Q Consensus 397 ~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~ 476 (1293)
|+|++|.+||+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.+ ..+++|+|+||||++.++.|
T Consensus 445 p~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~-~~~~~t~i~itH~~~~~~~~ 523 (529)
T TIGR02857 445 PQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRA-LAQGRTVLLVTHRLALAERA 523 (529)
T ss_pred cccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHH-hcCCCEEEEEecCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999886654 45789999999999999999
Q ss_pred CeEEEE
Q 000774 477 DRIILV 482 (1293)
Q Consensus 477 d~i~~l 482 (1293)
|+|++|
T Consensus 524 d~i~~l 529 (529)
T TIGR02857 524 DRIVVL 529 (529)
T ss_pred CEEEeC
Confidence 999975
No 79
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.1e-63 Score=565.59 Aligned_cols=488 Identities=24% Similarity=0.323 Sum_probs=390.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000774 19 VGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFR 97 (1293)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~ 97 (1293)
++.+...++..........+..++-......+|++.+.++.+++.+..+|++.+.+..-...+..+. ..+..+++..+.
T Consensus 82 iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~ 161 (591)
T KOG0057|consen 82 IARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFE 161 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 3444455554444444456677777788889999999999999999999999999999999999876 345666666677
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHH
Q 000774 98 IIISLVLLYNELGVASLLGALLLVFMFP-VQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQ 176 (1293)
Q Consensus 98 ~i~~~~~l~~~~~~~~l~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~ 176 (1293)
+.+....+++..|....+..++.+..+. +...+...-.+..++.+++.+.......|.+.+.++||.||-|+...+++.
T Consensus 162 i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~ 241 (591)
T KOG0057|consen 162 IALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYD 241 (591)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 7777778888888765444444444433 333444455567778888888999999999999999999999999888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 177 NVRNDELSWFRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNA 254 (1293)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~ 254 (1293)
..-.+.-+...+.....++..+....+. ..+.++..+..-+..+.+|.+.++...+++..+..|+..++..+..+.++
T Consensus 242 ~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~ 321 (591)
T KOG0057|consen 242 GSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQA 321 (591)
T ss_pred HHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 6655554444433333333333322221 12223334444456788999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHh
Q 000774 255 NVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAML 334 (1293)
Q Consensus 255 ~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~ 334 (1293)
..-+.-+....+..........+.......|+|+||+|+|++ ++++|+++||+|++||++||||+|||||||++++|.
T Consensus 322 l~Dm~~~~~l~~~~~~i~~~~~~i~~~~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~Ll 399 (591)
T KOG0057|consen 322 LTDMRTLFILLEVDEDIQEAALPIELFGGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLL 399 (591)
T ss_pred HHhHHHHHhhhhhhhhhhhccCCcccCCCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHH
Confidence 887776655443322221111112222345999999999974 578999999999999999999999999999999999
Q ss_pred cCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCc
Q 000774 335 GELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDV 401 (1293)
Q Consensus 335 g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~ 401 (1293)
++++ ++|.+. .+|+.||||||+..||++||.+||.+|++ .+++++.++++.+++++.+..+|+||+
T Consensus 400 rF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~ 478 (591)
T KOG0057|consen 400 RFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQ 478 (591)
T ss_pred HHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccch
Confidence 9999 788432 25677999999999999999999999986 578899999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEE
Q 000774 402 TEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIIL 481 (1293)
Q Consensus 402 t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~ 481 (1293)
|.+||+|..|||||||||+||||+++||+|++||||||+||.+|++.+++.+.+ ...+||+|+|.||++.++.+|+|++
T Consensus 479 T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~-~~~~rTvI~IvH~l~ll~~~DkI~~ 557 (591)
T KOG0057|consen 479 TLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMD-VMSGRTVIMIVHRLDLLKDFDKIIV 557 (591)
T ss_pred hhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHH-hcCCCeEEEEEecchhHhcCCEEEE
Confidence 999999999999999999999999999999999999999999999999997766 6689999999999999999999999
Q ss_pred EeCCeEEEecChHHHhhccHHHHHHHHHh
Q 000774 482 VHEGMVKEEGTFEDLSNNGELFQKLMENA 510 (1293)
Q Consensus 482 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 510 (1293)
+++|++.+.|+|+||+...+.|.++|..+
T Consensus 558 l~nG~v~e~gth~ell~~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 558 LDNGTVKEYGTHSELLAPSELYADLWTTQ 586 (591)
T ss_pred EECCeeEEeccHHHHhhhhhHHHHHhccc
Confidence 99999999999999999888899888653
No 80
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=9.6e-63 Score=668.27 Aligned_cols=475 Identities=19% Similarity=0.269 Sum_probs=388.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Q 000774 32 FQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELG 110 (1293)
Q Consensus 32 ~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~~~~l~~~~~ 110 (1293)
.+.....+.+....++..+|+++++.|..++++.++|+++||+++|++.++..+ ..+..++..++.++++++++++..+
T Consensus 1026 ~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~ 1105 (1522)
T TIGR00957 1026 SMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATP 1105 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456778888899999999999999999999999999999999999999865 4556666666666666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000774 111 VASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQ 190 (1293)
Q Consensus 111 ~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~ 190 (1293)
+.+++.++++++++.+..++.+..+...+......+...+.+.|.++|+++||+|++++.+.++..+..+...+......
T Consensus 1106 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~ 1185 (1522)
T TIGR00957 1106 IAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSI 1185 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554444444444455555566666666666777888999999999999999999999998888877776666544433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 000774 191 FLAACNSFILNSIPVLVTVVSFGMFTLL-GGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEE 269 (1293)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~ 269 (1293)
....+.......+..++ ++..+.+.+. .+.+++|.+.+++.+...+..|+..+...+..+..+.+|++||.++++.++
T Consensus 1186 ~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~ 1264 (1522)
T TIGR00957 1186 VANRWLAVRLECVGNCI-VLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEK 1264 (1522)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33444433333332222 2223333333 578999999999999999999999999999999999999999999997665
Q ss_pred cccC--CC--CCC-CCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCc
Q 000774 270 KILL--PN--PPL-TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDAS 344 (1293)
Q Consensus 270 ~~~~--~~--~~~-~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~ 344 (1293)
+... .. ++. -+....|+|+||+|+|+++ .+++|+||||+|++||++||||+||||||||+++|.|+++|++|..
T Consensus 1265 e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I 1343 (1522)
T TIGR00957 1265 EAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEI 1343 (1522)
T ss_pred CccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeE
Confidence 4321 11 111 0223569999999999743 3579999999999999999999999999999999999999999843
Q ss_pred e------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCC
Q 000774 345 A------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNIS 412 (1293)
Q Consensus 345 ~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 412 (1293)
. .+|++|+||||+|.+|+|||||||....+.++++++++++.|++.+++..+|+|++|.+||+|.+||
T Consensus 1344 ~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LS 1423 (1522)
T TIGR00957 1344 IIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLS 1423 (1522)
T ss_pred EECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCC
Confidence 2 1466899999999999999999998434688899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecC
Q 000774 413 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 492 (1293)
Q Consensus 413 GGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 492 (1293)
||||||++|||||+++|+|||||||||+||+++++.|.+.+ +...+++|+|+||||++.+..+|||+||++|+|++.|+
T Consensus 1424 gGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l-~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~ 1502 (1522)
T TIGR00957 1424 VGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTI-RTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGA 1502 (1522)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHH-HHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999998887654 55567899999999999999999999999999999999
Q ss_pred hHHHhhccHHHHHHHHH
Q 000774 493 FEDLSNNGELFQKLMEN 509 (1293)
Q Consensus 493 ~~~l~~~~~~~~~~~~~ 509 (1293)
|++|+++++.|+++++.
T Consensus 1503 ~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1503 PSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred HHHHHhCCCHHHHHHHH
Confidence 99999988999998875
No 81
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.6e-63 Score=665.92 Aligned_cols=211 Identities=26% Similarity=0.402 Sum_probs=175.3
Q ss_pred cEEEEEEEEEec--CCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC---CCcceEEECCeecCCCChHHH
Q 000774 908 SIKFEDVVLRYR--PELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDL 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~--~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~---p~~G~I~i~g~~i~~~~~~~~ 982 (1293)
.++++||+++|+ ++.+++|+|||+++++||++||+||||||||||+++|+|+.+ |++|+|.+||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 479999999995 223469999999999999999999999999999999999998 78899999999984 247
Q ss_pred hhhceEEccccccc-cccHhhhcCCCC------CCCHHH----HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHH
Q 000774 983 RKILGIIPQSPVLF-SGTVRFNLDPFS------EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1051 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf-~~ti~~nl~~~~------~~~~~~----~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqk 1051 (1293)
|+.+|||||++.++ ..||+|||.+.. ..++++ +.++++..++.+ -.|+.+++.+..||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHh
Confidence 88999999998655 569999997421 122222 334444443322 246667766778999999
Q ss_pred HHHHHHHHhccCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchh--hccCEEEEEeCC-eEeeecC
Q 000774 1052 QLLSLSRALLRRSK-ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTI--IDCDRILLLDSG-RVLEYDT 1126 (1293)
Q Consensus 1052 qrl~lArall~~p~-iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~--~~~d~i~vl~~G-~i~~~g~ 1126 (1293)
||++|||||+.+|+ ||+|||||+|||+.+...+++.|+++. +++|||+++|+++.. ..||++++|++| ++++.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 999999999999999999999999974 579999999999973 459999999987 9999998
Q ss_pred hhh
Q 000774 1127 PEE 1129 (1293)
Q Consensus 1127 ~~e 1129 (1293)
+.+
T Consensus 988 ~~~ 990 (1394)
T TIGR00956 988 LGE 990 (1394)
T ss_pred ccc
Confidence 743
No 82
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=8.9e-63 Score=619.17 Aligned_cols=200 Identities=19% Similarity=0.285 Sum_probs=161.6
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
..++++||+++|++. +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 359999999999643 3589999999999999999999999999999999999999999999875 2469
Q ss_pred eEEccccccccccHhhhcC-----CCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 987 GIIPQSPVLFSGTVRFNLD-----PFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 987 ~~v~Q~~~lf~~ti~~nl~-----~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
||+||++. ...++.+|.. .+....++++.++++..++.+ ......+..|||||||||+||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~----------~~~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTG----------NLALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCCh----------HHhcCCccccCHHHHHHHHHHHHHh
Confidence 99999873 2223444321 111223444555555444321 1234556789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEe-eecChhhhh
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELL 1131 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~-~~g~~~el~ 1131 (1293)
.+|++|||||||++||+.+.+.+.+.|.+. ++|||+||||++++.. |||+++|++|+++ ..|+++++.
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999874 4699999999999987 9999999999998 568887764
No 83
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4.7e-61 Score=598.09 Aligned_cols=522 Identities=16% Similarity=0.124 Sum_probs=388.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 586 WVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLH 665 (1293)
Q Consensus 586 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 665 (1293)
+.+++.+++.++...+....+.++..+.+....... .....+.++.++..++.++..++....+.+...++|.++++
T Consensus 18 ~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~ 94 (555)
T TIGR01194 18 AITAFSIALGLAGGLAIIALLASINNAIHEENFLGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCE 94 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555666666677777776653211111 11222444555667788888899999999999999999999
Q ss_pred HHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 666 SILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQ 745 (1293)
Q Consensus 666 ~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 745 (1293)
++++.|+.+|+++++|++++|+++|++.++..+.. +..++..++.++..++++++++|.+.++++.++++.+.+..++.
T Consensus 95 ~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~ 173 (555)
T TIGR01194 95 KILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAF 173 (555)
T ss_pred HHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998754 55666666677777778888888877765554444444444343
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 746 STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD--RMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW 823 (1293)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1293)
+..++..+......+.+.+.+.|.+.|++++|+|+.++ ...+.+.+..+...+.................++..+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (555)
T TIGR01194 174 MGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIG 253 (555)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444556778899999999999999999843 3445555555544444332222211111111221111111
Q ss_pred HHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccc---cCCCCC-
Q 000774 824 LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLV---IESNRP- 899 (1293)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~---~~~~~~- 899 (1293)
+..++... .+..+ .+.+..++.+...+..++..+......++....+.+|+.++.+.+.+++.. .+....
T Consensus 254 ~~~~~~~~-~~~~t-----~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~ 327 (555)
T TIGR01194 254 CALFAAAM-FASID-----AAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVL 327 (555)
T ss_pred HHHHHHHH-hcCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 11111111 12232 445556666777788899999999999999999999999997642221110 000000
Q ss_pred -CCCCCCCccEEEEEEEEEecCC---CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecC
Q 000774 900 -PPGWPSSGSIKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA 975 (1293)
Q Consensus 900 -~~~~~~~g~i~~~~v~~~y~~~---~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~ 975 (1293)
.+.....+.|+++||+|+|+++ .+++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.|+.
T Consensus 328 ~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~ 407 (555)
T TIGR01194 328 LLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVS 407 (555)
T ss_pred ccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECC
Confidence 0001123569999999999753 236999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 976 KFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 976 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+++..++|++++||||++.+|++|+++|+. .+.++++++++++.++++++++.+|.|++|. .+|||||||||+
T Consensus 408 ~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRla 480 (555)
T TIGR01194 408 ADSRDDYRDLFSAIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLA 480 (555)
T ss_pred CCCHHHHHhhCcEEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHH
Confidence 999999999999999999999999999963 3457888999999999999999999999984 679999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH-H-cCCcEEEEEecCcchhhccCEEEEEeCCeEeee
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIRE-E-FKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~-~-~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 1124 (1293)
||||++++|+||||||||++||+++++.+++.+.+ . .+++|+|+||||++++..||+|++|++|++++.
T Consensus 481 laRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 481 LICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999887643 3 358999999999999989999999999999875
No 84
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-61 Score=654.77 Aligned_cols=486 Identities=19% Similarity=0.236 Sum_probs=366.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000774 24 GVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISL 102 (1293)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~~ 102 (1293)
..++.....+...+.+.+....++..+|+++++.|..++++.++|+++||+++|++.++..+ ..+..++...+.++.++
T Consensus 966 ~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~ 1045 (1622)
T PLN03130 966 QVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTF 1045 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444556788888899999999999999999999999999999999999999865 34455555555555555
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHH
Q 000774 103 VLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDE 182 (1293)
Q Consensus 103 ~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~ 182 (1293)
+++....++..++.+.++++++.+..++.+..++..+......+...+.+.|.++|+++||+|++++.+.+...+..+..
T Consensus 1046 i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~ 1125 (1622)
T PLN03130 1046 VLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNN 1125 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 54444443332222222222233333444444555555556667788899999999999999999998887766655554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 183 LSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGG-DLT-----PARAFTSLSLFAVLRFPLFMLPNMITQVVNANV 256 (1293)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~lt-----~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~ 256 (1293)
.+..........+......++..+++ +..+.+.+..+ ... ++.+-.++++...+..++..+...+..+..+.+
T Consensus 1126 ~~~~~~~~~~~~wl~~~l~~~~~~~i-~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~ 1204 (1622)
T PLN03130 1126 IRFTLVNMSSNRWLAIRLETLGGLMI-WLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLN 1204 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44332222222222222222222221 12222323322 111 233333344455555677777778888899999
Q ss_pred HHHHHHHHhhhhhcccC---CC-CCC-CCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHH
Q 000774 257 SLKRMEEFLLAEEKILL---PN-PPL-TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLIS 331 (1293)
Q Consensus 257 s~~Ri~~~l~~~~~~~~---~~-~~~-~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~ 331 (1293)
|++|+.++++.+++... .. ++. -+..+.|+|+||+|+|++ +.+++|+|+||+|++||++||||+||||||||++
T Consensus 1205 sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~-~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~ 1283 (1622)
T PLN03130 1205 AVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLN 1283 (1622)
T ss_pred HHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCC-CCCceecceeEEEcCCCEEEEECCCCCCHHHHHH
Confidence 99999999987654321 11 111 122346999999999964 3457999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCC
Q 000774 332 AMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGG 399 (1293)
Q Consensus 332 ~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g 399 (1293)
+|.|+++|++|... .+|++|+||||+|.||+|||||||..+.+.++++++++++.|+++++++.+|+|
T Consensus 1284 lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~G 1363 (1622)
T PLN03130 1284 ALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLG 1363 (1622)
T ss_pred HHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccc
Confidence 99999999998432 146789999999999999999999998888899999999999999999999999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeE
Q 000774 400 DVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRI 479 (1293)
Q Consensus 400 ~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i 479 (1293)
++|.+||+|.+||||||||++|||||+++|+|||||||||+||+++++.|.+.+ +...+++|+|+||||++.+..||||
T Consensus 1364 Ldt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I-~~~~~~~TvI~IAHRL~tI~~~DrI 1442 (1622)
T PLN03130 1364 LDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTI-REEFKSCTMLIIAHRLNTIIDCDRI 1442 (1622)
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHH-HHHCCCCEEEEEeCChHHHHhCCEE
Confidence 999999999999999999999999999999999999999999999999987655 4456789999999999999999999
Q ss_pred EEEeCCeEEEecChHHHhhc-cHHHHHHHHHhch
Q 000774 480 ILVHEGMVKEEGTFEDLSNN-GELFQKLMENAGK 512 (1293)
Q Consensus 480 ~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~~ 512 (1293)
+||++|+|++.|+|++|+++ ++.|++++...+.
T Consensus 1443 lVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1443 LVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred EEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcCh
Confidence 99999999999999999987 6899999887654
No 85
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.2e-61 Score=652.52 Aligned_cols=479 Identities=17% Similarity=0.230 Sum_probs=365.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 000774 31 YFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNEL 109 (1293)
Q Consensus 31 ~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~-~l~~~~~~~~~~i~~~~~l~~~~ 109 (1293)
..+...+.+.+....++..+|+++++.|..++++.++|+++||+++|++.++..+. .+..++..++.++.+++++....
T Consensus 970 ~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~ 1049 (1495)
T PLN03232 970 NSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVS 1049 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567888888999999999999999999999999999999999999998653 44445555555555555444443
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Q 000774 110 GVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKA 189 (1293)
Q Consensus 110 ~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~ 189 (1293)
++..++.+.++++++.+..+..+..+...+......+...+.+.|.++|+++||+|++++.+.++..+..+...+.....
T Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1129 (1495)
T PLN03232 1050 TISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLAN 1129 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222222222222222223333444555666667788889999999999999999999988887766665554443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCC----C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 190 QFLAACNSFILNSIPVLVTVVSFGMFTLL-GGDL----T-PARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEE 263 (1293)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~l----t-~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~ 263 (1293)
.....+.......+..+ +++..+.+.+. .+.+ . ++.+..++.+...+..|+..+...+..+..+..|++||.+
T Consensus 1130 ~~~~~wl~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e 1208 (1495)
T PLN03232 1130 TSSNRWLTIRLETLGGV-MIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGN 1208 (1495)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222111 11122223332 2322 1 2223335556666777899999999999999999999999
Q ss_pred HhhhhhcccC--CC--CCC-CCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC
Q 000774 264 FLLAEEKILL--PN--PPL-TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP 338 (1293)
Q Consensus 264 ~l~~~~~~~~--~~--~~~-~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~ 338 (1293)
+++.+++... .. ++. .+....|+++||+|+|++ +.+++|+|+||+|++||++||||+||||||||+++|.|+++
T Consensus 1209 ~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~-~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~ 1287 (1495)
T PLN03232 1209 YIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRP-GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE 1287 (1495)
T ss_pred HhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECC-CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc
Confidence 9986654321 11 111 122346999999999964 34689999999999999999999999999999999999999
Q ss_pred CCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccC
Q 000774 339 PVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGE 406 (1293)
Q Consensus 339 ~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~ 406 (1293)
|++|... .+|++|+||||+|.+|++||||||.++.+.++++++++++.+++.++++.+|+|++|.+||
T Consensus 1288 p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e 1367 (1495)
T PLN03232 1288 LEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSE 1367 (1495)
T ss_pred CCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecC
Confidence 9998432 1466899999999999999999999988888999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCe
Q 000774 407 RGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGM 486 (1293)
Q Consensus 407 ~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~ 486 (1293)
+|.+||||||||++|||||+++|+|||||||||+||+++++.|.+.+ +...+++|+|+||||++.+..||+|++|++|+
T Consensus 1368 ~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L-~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1446 (1495)
T PLN03232 1368 GGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTI-REEFKSCTMLVIAHRLNTIIDCDKILVLSSGQ 1446 (1495)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHH-HHHcCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999987655 44567899999999999999999999999999
Q ss_pred EEEecChHHHhhcc-HHHHHHHHHhch
Q 000774 487 VKEEGTFEDLSNNG-ELFQKLMENAGK 512 (1293)
Q Consensus 487 i~~~g~~~~l~~~~-~~~~~~~~~~~~ 512 (1293)
|++.|+|+||++++ +.|+++++.++.
T Consensus 1447 ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1447 VLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred EEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 99999999999886 589999876553
No 86
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.9e-63 Score=545.34 Aligned_cols=488 Identities=25% Similarity=0.380 Sum_probs=389.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000774 646 YWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTF-VLIGIVST 724 (1293)
Q Consensus 646 ~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 724 (1293)
.++...+..+.+.+-.+.|.|+.++++.|+-+..+|.+..-+......++..+...+...+..++-+.... ++....+|
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 34556667777788888999999999999998877765544444444444433344444444444333332 33334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 725 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNM 804 (1293)
Q Consensus 725 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1293)
+...+.+..++++.++.......+...++....+.+..++.-.+++-+.+++|.|+.|+++..++.+..+.+.+......
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 66655555555554444433333444555555666677788889999999999999999999999999999998888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000774 805 GANRWLAIRLEIVGGLMIWLTATF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGN 882 (1293)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~ 882 (1293)
.+-.|+.+....+........... .-+..+..+ .+.+...-.+..++..+++.+......+.+.....++..+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~T-----vgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfd 238 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLT-----VGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFD 238 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCC-----chhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHH
Confidence 776776665544433222221111 112333333 4455566677888888888888888899999999999988
Q ss_pred hhcCCCCCccccCCCCCCCCCC-CCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC
Q 000774 883 YIELPSEAPLVIESNRPPPGWP-SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE 961 (1293)
Q Consensus 883 ~~~~~~e~~~~~~~~~~~~~~~-~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~ 961 (1293)
+.+.+.+... ....++.|| ..|.+.|+||+|.|.+. .++|+++||++++|+++||||++|+||||++++|.|+|+
T Consensus 239 Ll~~~~~v~d---~pda~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD 314 (497)
T COG5265 239 LLDVEAEVSD---APDAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD 314 (497)
T ss_pred hhccchhhcc---CCCCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC
Confidence 8876654321 222233442 35679999999999876 479999999999999999999999999999999999999
Q ss_pred CCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhh
Q 000774 962 LERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVS 1040 (1293)
Q Consensus 962 p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~ 1040 (1293)
+++|.|.+||+|+.....+.+|+.||+||||..||+.|+..|+.+.+ ..+++|++.+++.++++++++.+|+|+++.++
T Consensus 315 ~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vg 394 (497)
T COG5265 315 VNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVG 394 (497)
T ss_pred CcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccc
Confidence 99999999999999999999999999999999999999999998765 46899999999999999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCe
Q 000774 1041 EAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGR 1120 (1293)
Q Consensus 1041 ~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~ 1120 (1293)
|+|-.||||||||+++||++|++|+||+|||+||+||..||+.|+..|++...++|.++|+||++++.+||.|+||++|+
T Consensus 395 erglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~ 474 (497)
T COG5265 395 ERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGR 474 (497)
T ss_pred hheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecChhhhhhcCCChHHHHHH
Q 000774 1121 VLEYDTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1121 i~~~g~~~el~~~~~~~~~~l~~ 1143 (1293)
|+|.|+|+||+.+ +|.|..|+.
T Consensus 475 i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 475 IVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred EEecCcHHHHHHc-CChHHHHhc
Confidence 9999999999986 788998874
No 87
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-64 Score=557.82 Aligned_cols=471 Identities=20% Similarity=0.311 Sum_probs=373.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHhHH
Q 000774 35 VMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVL-LYNELGVA 112 (1293)
Q Consensus 35 ~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~-~l~~~~~~~~~~i~~~~~-l~~~~~~~ 112 (1293)
..++....-.++-..+|+|+.+++..++-++++|+++..++...+.+. +.. .+..+....+-+.++++. .+...+|.
T Consensus 283 Wi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wF 361 (790)
T KOG0056|consen 283 WIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWF 361 (790)
T ss_pred EEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHH
Confidence 334555555678888999999999999999999999998887766665 222 122333333334344432 23344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH--
Q 000774 113 SLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQ-- 190 (1293)
Q Consensus 113 ~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~-- 190 (1293)
.++.++.+.++..+...+...-.++++++..+-.+....-.+.+-+.+++|.|+.|+...+++.+...++.+..+|..
T Consensus 362 gLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~s 441 (790)
T KOG0056|consen 362 GLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLAS 441 (790)
T ss_pred HHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 555555444444333333344455666666666666667779999999999999998877777666555555444432
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000774 191 --FLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAE 268 (1293)
Q Consensus 191 --~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~ 268 (1293)
+++.....++.. .++..-.+.+|.+..+.+++|..+.+..++..+.+|++.++..+..++++.+-++++.++++++
T Consensus 442 LnfLN~~Qn~Ii~l--gll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee 519 (790)
T KOG0056|consen 442 LNFLNIVQNGIIGL--GLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEE 519 (790)
T ss_pred HHHHHHHhhhhhhh--HHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcC
Confidence 222222222211 1122223455667788999999999999999999999999999999999999999999999887
Q ss_pred hccc-CCC-CCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCce-
Q 000774 269 EKIL-LPN-PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASA- 345 (1293)
Q Consensus 269 ~~~~-~~~-~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~- 345 (1293)
++.. .|+ ++.....+.|+|+||+|.|++ ++|+|+||||+++||+.+|+|||||+||||++++|.++++..+|...
T Consensus 520 ~eVvd~P~a~pl~~~~G~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~i 597 (790)
T KOG0056|consen 520 PEVVDLPGAPPLKVTQGKIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITI 597 (790)
T ss_pred chhhcCCCCCCccccCCeEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEE
Confidence 7642 122 233334567999999999974 68999999999999999999999999999999999999999998432
Q ss_pred -----------eecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCCh
Q 000774 346 -----------VIRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 413 (1293)
Q Consensus 346 -----------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 413 (1293)
.+|+.||+||||..|||+||..||.++++ ..++++.++.+++++++.+-.+|+||.|.+||+|-.|||
T Consensus 598 DgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSG 677 (790)
T KOG0056|consen 598 DGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSG 677 (790)
T ss_pred cCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCC
Confidence 14668999999999999999999999986 567889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecCh
Q 000774 414 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTF 493 (1293)
Q Consensus 414 GqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~ 493 (1293)
|+|||||+||+++++|.+++|||+||+||..+++.|. .++.+...++|.|+|+||++++-+||.|+++++|+|++.|+|
T Consensus 678 GEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQ-aaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~H 756 (790)
T KOG0056|consen 678 GEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQ-AALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRH 756 (790)
T ss_pred cchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHH-HHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcH
Confidence 9999999999999999999999999999999999995 567778899999999999999999999999999999999999
Q ss_pred HHHhhc-cHHHHHHHHHhc
Q 000774 494 EDLSNN-GELFQKLMENAG 511 (1293)
Q Consensus 494 ~~l~~~-~~~~~~~~~~~~ 511 (1293)
+||.++ +|.|++||+.+.
T Consensus 757 eeLl~rdgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 757 EELLKRDGGAYADMWQAQQ 775 (790)
T ss_pred HHHHhccCCcHHHHHHHHH
Confidence 999988 889999997654
No 88
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1e-60 Score=646.21 Aligned_cols=472 Identities=19% Similarity=0.204 Sum_probs=373.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000774 38 VGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVASLLG 116 (1293)
Q Consensus 38 ~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~~~~l~~~~~~~~l~~ 116 (1293)
.+.+....++..+|+++++.|..++++.++|+++||+++|++.++..+ ..+..++..++.++++++++++..++..++.
T Consensus 1025 ~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~ 1104 (1560)
T PTZ00243 1025 AMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVAL 1104 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445678899999999999999999999999999999999999865 3455566666666666666665555443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 117 ALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACN 196 (1293)
Q Consensus 117 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1293)
+.++++++.+..++.+..+...+......+...+.+.|.++|+++||+|++++.+.+++.+..+...+..........+.
T Consensus 1105 i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~ 1184 (1560)
T PTZ00243 1105 VPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWL 1184 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332333344445555566666666777888999999999999999999999999888777776665544433333333
Q ss_pred HHHHHHHHHHH--HHHHHHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 000774 197 SFILNSIPVLV--TVVSFGMF--TLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKIL 272 (1293)
Q Consensus 197 ~~~~~~~~~~v--~~~~~~~~--~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~ 272 (1293)
.....++..++ .++.++++ ....+.+++|.+..++.+...+..|+..+...+..+..+..|++||.++++..+++.
T Consensus 1185 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~ 1264 (1560)
T PTZ00243 1185 GVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHED 1264 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 33333222211 11122222 223345788988888888888999999999999999999999999999986322110
Q ss_pred -C--------------------------C-CCC----CCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEc
Q 000774 273 -L--------------------------P-NPP----LTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVG 320 (1293)
Q Consensus 273 -~--------------------------~-~~~----~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG 320 (1293)
. + .++ ..+....|+|+||+|+|++ +.+++|+||||+|++||++||||
T Consensus 1265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~-~~~~vL~~vsf~I~~GekVaIVG 1343 (1560)
T PTZ00243 1265 MPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYRE-GLPLVLRGVSFRIAPREKVGIVG 1343 (1560)
T ss_pred cccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCC-CCCceeecceEEECCCCEEEEEC
Confidence 0 0 000 0111246999999999974 34569999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcC
Q 000774 321 GTGEGKTSLISAMLGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTS 388 (1293)
Q Consensus 321 ~~GsGKSTLl~~l~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~ 388 (1293)
+||||||||+++|+|+++|++|.+. .+|+.|+||||+|.||++||+|||..+...++++++++++.|+
T Consensus 1344 rTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~ 1423 (1560)
T PTZ00243 1344 RTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVG 1423 (1560)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCC
Confidence 9999999999999999999998432 1466899999999999999999998776788999999999999
Q ss_pred ChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcC-CCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEe
Q 000774 389 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN-SDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVT 467 (1293)
Q Consensus 389 l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~-~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vt 467 (1293)
+.+++..+|+|++|.+||+|.+|||||||||+|||||+++ |+|||||||||+||+++++.|.+.+ +...+++|+|+||
T Consensus 1424 l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L-~~~~~~~TvI~IA 1502 (1560)
T PTZ00243 1424 LRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATV-MSAFSAYTVITIA 1502 (1560)
T ss_pred ChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHH-HHHCCCCEEEEEe
Confidence 9999999999999999999999999999999999999995 8999999999999999999997655 4456789999999
Q ss_pred cCcchhhhCCeEEEEeCCeEEEecChHHHhhc-cHHHHHHHHHhc
Q 000774 468 NQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN-GELFQKLMENAG 511 (1293)
Q Consensus 468 H~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 511 (1293)
||++.+..||+|++|++|+|++.|+|++|+++ ++.|++++...+
T Consensus 1503 HRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1503 HRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred ccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 99999999999999999999999999999975 788999987654
No 89
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.7e-60 Score=536.26 Aligned_cols=478 Identities=23% Similarity=0.348 Sum_probs=392.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH--HHHH
Q 000774 13 YAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ--ALHT 90 (1293)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~--~l~~ 90 (1293)
+.++....+++..++.....+...|++.++...|...+|....+.+.... ..|+=.+ .-+|.++++.|.. .+..
T Consensus 65 Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~---~~g~~~Q-~LrDL~qvR~Fltg~g~~A 140 (580)
T COG4618 65 LTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRR---GSGDGLQ-PLRDLDQVRQFLTGTGLTA 140 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhc---CCCcccc-chhhHHHHHHHHcCCCcch
Confidence 33444456667777788888888999999999999999999876554432 2332222 3479999998863 2334
Q ss_pred HHHHHHHH--HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch
Q 000774 91 LWSAPFRI--IISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWE 168 (1293)
Q Consensus 91 ~~~~~~~~--i~~~~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e 168 (1293)
++..|+.. +..++++..++|+.++++.++++++..+.- +..++..++..+...+++.......++.++|+++|+.
T Consensus 141 ~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~---~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~ 217 (580)
T COG4618 141 FFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNE---RATRKPLKEASEASIRANQLADATLRNAEVIEAMGML 217 (580)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhccc
Confidence 44444332 233455666677777776666655554443 4445567778888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 169 NSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPN 246 (1293)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~ 246 (1293)
+...++|.+.....+....+..-.......+.-.+-++ ..++..|+|+++.|++|+|.+++...+......|+.....
T Consensus 218 ~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~ 297 (580)
T COG4618 218 GNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIA 297 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHH
Confidence 99999999998888887666555444444444433333 3456678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcH
Q 000774 247 MITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGK 326 (1293)
Q Consensus 247 ~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGK 326 (1293)
.|.++..++.|++|+.+++...+..... -+.+.+...+.++++++.-| +.++++++|+||++++||.+||||||||||
T Consensus 298 ~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~-m~LP~P~g~L~Ve~l~~~PP-g~~~pil~~isF~l~~G~~lgIIGPSgSGK 375 (580)
T COG4618 298 NWKQFVAARQSYKRLNELLAELPAAAER-MPLPAPQGALSVERLTAAPP-GQKKPILKGISFALQAGEALGIIGPSGSGK 375 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccCC-CCCCCCCceeeEeeeeecCC-CCCCcceecceeEecCCceEEEECCCCccH
Confidence 9999999999999999999875543222 12334456799999999765 457899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHc-cCCCCCHHHHHHHHHHcCChhHH
Q 000774 327 TSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNIL-FGSAFEPARYEKAIDVTSLQHDL 393 (1293)
Q Consensus 327 STLl~~l~g~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~-~g~~~~~~~~~~~~~~~~l~~~~ 393 (1293)
|||.++|.|.++|.+|.+.. +.++|||+||+..||+|||.|||. |+.+.|++++.++.+.++.++.+
T Consensus 376 STLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelI 455 (580)
T COG4618 376 STLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELI 455 (580)
T ss_pred HHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHH
Confidence 99999999999999984321 335799999999999999999996 77788899999999999999999
Q ss_pred hcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchh
Q 000774 394 DLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFL 473 (1293)
Q Consensus 394 ~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l 473 (1293)
-.+|+||+|.||++|.+|||||||||+||||||.||.+++||||-|+||.+.+..+.+.+.....+|.|+|+||||++.+
T Consensus 456 l~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L 535 (580)
T COG4618 456 LRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSAL 535 (580)
T ss_pred HhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998887788899999999999999
Q ss_pred hhCCeEEEEeCCeEEEecChHHHhhc
Q 000774 474 SQVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 474 ~~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
..+|+|.+|++|++...|+.+|.+.+
T Consensus 536 ~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 536 ASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred hhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999888754
No 90
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.5e-61 Score=595.35 Aligned_cols=191 Identities=21% Similarity=0.294 Sum_probs=160.6
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++ ..|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 4899999999964 25999999999999999999999999999999999999999999985 1599
Q ss_pred EEccccccc-cccHhhhcCCCCC-CC-HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 988 IIPQSPVLF-SGTVRFNLDPFSE-HS-DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 988 ~v~Q~~~lf-~~ti~~nl~~~~~-~~-~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
|+||++.++ +.|+++|+..... .. +.... +.++. .+++...+....+||||||||++|||||+.+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~---------~~L~~--l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKS---------EIIKP--LQLERLLDKNVKDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHH---------HHHHH--CCCHHHHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 999998755 5599999864311 11 11222 33333 24555556677889999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecC
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 1126 (1293)
+||||||||++||+.+...+.+.|+++.. ++|+|+||||++++.. ||||++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999998753 7899999999999877 999999965 8877776
No 91
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.8e-58 Score=624.65 Aligned_cols=475 Identities=16% Similarity=0.216 Sum_probs=372.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000774 34 NVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVA 112 (1293)
Q Consensus 34 ~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~~~~l~~~~~~~ 112 (1293)
...+.+.+....++..+|+++++.|..++++.++|+++||+++|++.++..+ ..+..++...+.++++++++++..++.
T Consensus 948 ~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l 1027 (1490)
T TIGR01271 948 PLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYI 1027 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677788889999999999999999999999999999999999999865 445566666666666666666666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 113 SLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFL 192 (1293)
Q Consensus 113 ~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1293)
.++.+.++++++.+..++.+..+...+......+...+.+.|.++|+.+||+|++++.+.+++.+..+...+........
T Consensus 1028 ~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1107 (1490)
T TIGR01271 1028 FIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLST 1107 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444444444444555555556666666777788899999999999999999999999999888776544332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 000774 193 AACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKIL 272 (1293)
Q Consensus 193 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~ 272 (1293)
..+......++..++.+. .+.+.+.....++|.+..++.++..+..++..+...+..+..+..|++||.++++.+++..
T Consensus 1108 ~~wl~~~~~~i~~~~~~~-~~~l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~ 1186 (1490)
T TIGR01271 1108 LRWFQMRIDIIFVFFFIA-VTFIAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEP 1186 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 222222222211111111 0111111122445555555666667777888888899999999999999999997655421
Q ss_pred CC-C---------------CCCC---CCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHH
Q 000774 273 LP-N---------------PPLT---SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAM 333 (1293)
Q Consensus 273 ~~-~---------------~~~~---~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l 333 (1293)
.+ . +..+ +..+.|+|+||+|+|++ +.+++|+|+||+|++||++||||+||||||||+++|
T Consensus 1187 ~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~-~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL 1265 (1490)
T TIGR01271 1187 RPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTE-AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSAL 1265 (1490)
T ss_pred cccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCC-CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 10 0 0000 12346999999999975 357899999999999999999999999999999999
Q ss_pred hcCCCCCCCCce------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCc
Q 000774 334 LGELPPVSDASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDV 401 (1293)
Q Consensus 334 ~g~~~~~~g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~ 401 (1293)
+|+++ .+|... .+|++|+||||+|.+|+||||+||......++++++++++.+++.+++..+|+|++
T Consensus 1266 ~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLd 1344 (1490)
T TIGR01271 1266 LRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLD 1344 (1490)
T ss_pred hhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccc
Confidence 99997 667421 14668999999999999999999987667789999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEE
Q 000774 402 TEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIIL 481 (1293)
Q Consensus 402 t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~ 481 (1293)
|.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.|.+.+ +...+++|+|+||||++.+..+|+|++
T Consensus 1345 t~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L-~~~~~~~TvI~IaHRl~ti~~~DrIlv 1423 (1490)
T TIGR01271 1345 FVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTL-KQSFSNCTVILSEHRVEALLECQQFLV 1423 (1490)
T ss_pred cccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHH-HHHcCCCEEEEEecCHHHHHhCCEEEE
Confidence 9999999999999999999999999999999999999999999999998765 445678999999999999999999999
Q ss_pred EeCCeEEEecChHHHhhccHHHHHHHHHhch
Q 000774 482 VHEGMVKEEGTFEDLSNNGELFQKLMENAGK 512 (1293)
Q Consensus 482 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 512 (1293)
|++|+|++.|+|++|++.++.|++++.....
T Consensus 1424 L~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1424 IEGSSVKQYDSIQKLLNETSLFKQAMSAADR 1454 (1490)
T ss_pred EECCEEEEeCCHHHHHcCCcHHHHHHHHhCh
Confidence 9999999999999999888899999876543
No 92
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3e-59 Score=623.23 Aligned_cols=211 Identities=25% Similarity=0.325 Sum_probs=170.4
Q ss_pred cEEEEEEEEEecC-----------CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC--CcceEEECCeec
Q 000774 908 SIKFEDVVLRYRP-----------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDI 974 (1293)
Q Consensus 908 ~i~~~~v~~~y~~-----------~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p--~~G~I~i~g~~i 974 (1293)
.+.++||++..+. +...+|+|||++++|||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 5899999998742 123699999999999999999999999999999999999874 689999999876
Q ss_pred CCCChHHHhhhceEEccccccccc-cHhhhcCCCC------CCCHH----HHHHHHHHhhHHHHHHHccCCcchhhhcC-
Q 000774 975 AKFGLMDLRKILGIIPQSPVLFSG-TVRFNLDPFS------EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEA- 1042 (1293)
Q Consensus 975 ~~~~~~~~r~~i~~v~Q~~~lf~~-ti~~nl~~~~------~~~~~----~~~~~l~~~~l~~~i~~lp~gl~~~~~~~- 1042 (1293)
. ....|+.+|||+|++.++.. ||+|||.+.. ..+++ .+.+.++..++.+. .++.++..
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24567789999999988765 9999996421 11222 23444444444332 23333322
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcch-h-hccCEEEEEeC-
Q 000774 1043 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-I-IDCDRILLLDS- 1118 (1293)
Q Consensus 1043 ~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~-~-~~~d~i~vl~~- 1118 (1293)
...|||||||||+|||+|+.+|+||+|||||+|||+.+...+.+.|++.. .++|||+++|+++. + +.||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 25799999999999999999999999999999999999999999999875 47999999999984 4 45999999996
Q ss_pred CeEeeecChh
Q 000774 1119 GRVLEYDTPE 1128 (1293)
Q Consensus 1119 G~i~~~g~~~ 1128 (1293)
|+++..|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 93
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.9e-58 Score=574.70 Aligned_cols=458 Identities=15% Similarity=0.162 Sum_probs=362.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 23 LGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISL 102 (1293)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~~l~~~~~~~~~~i~~~ 102 (1293)
+..++.+...+...+.+.++...+|..+|+|+++++..++++.++|++++++++|++.++.++..+..++...+.+++++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~ 144 (555)
T TIGR01194 65 LALLFRIGADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCI 144 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555666677889999999999999999999999999999999999999999999987755666666666677777
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHH
Q 000774 103 VLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWEN--SFQSKVQNVRN 180 (1293)
Q Consensus 103 ~~l~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~--~~~~~~~~~~~ 180 (1293)
+++++..|.++++.++++++.+.+..+..++.++..++..+..++..+.+.|.++|++++|+|+.++ ...+++.+..+
T Consensus 145 ~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~ 224 (555)
T TIGR01194 145 AYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESAN 224 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHH
Confidence 7777888888887776666666666666677777788888888999999999999999999999854 44555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 181 DELSWFRKAQFLAACNSFILNSIPVLVT--VVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSL 258 (1293)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~ 258 (1293)
+..+...+..........+...+..++. +++++.+ .+.+++|.+++++.+...+..|+..+...+..+.++.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~ 301 (555)
T TIGR01194 225 NIADLHIIEILIFIAAENFGQLLFFLLIGCALFAAAM---FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIAC 301 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444433333222222222222111111 1112222 2689999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcc--cC--CC-C-----CCCCCCCcEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcH
Q 000774 259 KRMEEFLLAEEKI--LL--PN-P-----PLTSGLPAISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGK 326 (1293)
Q Consensus 259 ~Ri~~~l~~~~~~--~~--~~-~-----~~~~~~~~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGK 326 (1293)
+||.++++.++++ .. +. . +.......|+++||+|+|+++. .+++|+|+||++++||+++|+|||||||
T Consensus 302 ~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGK 381 (555)
T TIGR01194 302 QRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGK 381 (555)
T ss_pred HHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCH
Confidence 9999998642211 00 10 0 0011124699999999997431 2469999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCcee------------ecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHh
Q 000774 327 TSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLD 394 (1293)
Q Consensus 327 STLl~~l~g~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~ 394 (1293)
|||+++|+|+++|++|.... ++..++||+|++++|++|+++|+ ....++++++++++.+++.++++
T Consensus 382 STl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~ 459 (555)
T TIGR01194 382 STLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVK 459 (555)
T ss_pred HHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhc
Confidence 99999999999999984321 34569999999999999999995 23456778889999999999999
Q ss_pred cCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEecCcchh
Q 000774 395 LLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFL 473 (1293)
Q Consensus 395 ~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~-~~~~~tvi~vtH~~~~l 473 (1293)
.+|+|++|. .+||||||||++||||++++|+++|||||||+||+++++.+.+.+++. ..+++|+|+||||++.+
T Consensus 460 ~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~ 534 (555)
T TIGR01194 460 IEDGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYF 534 (555)
T ss_pred ccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHH
Confidence 999999984 789999999999999999999999999999999999999998776543 34689999999999999
Q ss_pred hhCCeEEEEeCCeEEEe
Q 000774 474 SQVDRIILVHEGMVKEE 490 (1293)
Q Consensus 474 ~~~d~i~~l~~G~i~~~ 490 (1293)
+.||+|++|++|++++.
T Consensus 535 ~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 535 ELADQIIKLAAGCIVKD 551 (555)
T ss_pred HhCCEEEEEECCEEEEe
Confidence 99999999999999864
No 94
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-60 Score=552.45 Aligned_cols=443 Identities=25% Similarity=0.363 Sum_probs=339.1
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeec--------------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------- 348 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~-------------- 348 (1293)
+.++++|++++|+ +.++|+||||++++||++||+|.||||||||+|+|+|.++|++|. +.+.
T Consensus 7 ~ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~-I~~~G~~~~~~sp~~A~~ 82 (500)
T COG1129 7 PLLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGE-ILIDGKPVAFSSPRDALA 82 (500)
T ss_pred ceeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCce-EEECCEEccCCCHHHHHh
Confidence 4689999999997 468999999999999999999999999999999999999999994 3332
Q ss_pred CcEEEEcCCcccc-CccHHHHHccCCCC-------CHHHHH----HHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 349 GTVAYVPQVSWIF-NATVRDNILFGSAF-------EPARYE----KAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~-~~Tv~eni~~g~~~-------~~~~~~----~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
..|+.|+|+..|+ +.||.|||.+|+.. +..++. ++++..++. . + ......+||+|||
T Consensus 83 ~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~-------~--~--~~~~v~~Lsiaqr 151 (500)
T COG1129 83 AGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLD-------I--D--PDTLVGDLSIAQR 151 (500)
T ss_pred CCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCC-------C--C--hhhhhhhCCHHHH
Confidence 2499999999986 88999999998643 223332 223333322 0 0 2344578999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecCh-H
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF-E 494 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~-~ 494 (1293)
|-|+|||||..+++|+|||||||+|+....+.+++.+.+...+|.++|+||||++++.. ||||.||.||+.+..++. .
T Consensus 152 Q~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~ 231 (500)
T COG1129 152 QMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAA 231 (500)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeeccccc
Confidence 99999999999999999999999999999999999777777789999999999999865 899999999998865431 1
Q ss_pred HHhhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHH
Q 000774 495 DLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKV 574 (1293)
Q Consensus 495 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 574 (1293)
++..
T Consensus 232 ~~~~---------------------------------------------------------------------------- 235 (500)
T COG1129 232 ETSE---------------------------------------------------------------------------- 235 (500)
T ss_pred CCCH----------------------------------------------------------------------------
Confidence 1000
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 575 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLY 654 (1293)
Q Consensus 575 ~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 654 (1293)
T Consensus 236 -------------------------------------------------------------------------------- 235 (500)
T COG1129 236 -------------------------------------------------------------------------------- 235 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 655 AAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLL 734 (1293)
Q Consensus 655 ~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1293)
+.+ +..+.
T Consensus 236 -------------------------------------~~l-------v~~Mv---------------------------- 243 (500)
T COG1129 236 -------------------------------------DEL-------VRLMV---------------------------- 243 (500)
T ss_pred -------------------------------------HHH-------HHHhh----------------------------
Confidence 000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 735 LLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL 814 (1293)
Q Consensus 735 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1293)
T Consensus 244 -------------------------------------------------------------------------------- 243 (500)
T COG1129 244 -------------------------------------------------------------------------------- 243 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcccc
Q 000774 815 EIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVI 894 (1293)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~ 894 (1293)
+ + .+.+. .|. +.
T Consensus 244 -------------------G------------------------------r-------------~~~~~--~~~--~~-- 255 (500)
T COG1129 244 -------------------G------------------------------R-------------ELEDL--FPE--PP-- 255 (500)
T ss_pred -------------------C------------------------------c-------------chhhh--ccc--cc--
Confidence 0 0 00000 000 00
Q ss_pred CCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeec
Q 000774 895 ESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDI 974 (1293)
Q Consensus 895 ~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i 974 (1293)
.. .+....++++|++.. ..++|+||++.+||++||.|--|||+|-++++|+|..++.+|+|.+||+++
T Consensus 256 -~~-----~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v 323 (500)
T COG1129 256 -EE-----GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPV 323 (500)
T ss_pred -cc-----CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEc
Confidence 00 001123678887643 258999999999999999999999999999999999999999999999999
Q ss_pred CCCChH-HHhhhceEEcccc---ccc-cccHhhhcCCC--CCCCHH-HHHHHHHHhhHHHHHHHccCCcchhhhcCCCCC
Q 000774 975 AKFGLM-DLRKILGIIPQSP---VLF-SGTVRFNLDPF--SEHSDA-DLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1046 (1293)
Q Consensus 975 ~~~~~~-~~r~~i~~v~Q~~---~lf-~~ti~~nl~~~--~~~~~~-~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~L 1046 (1293)
..-++. ..+..|+|||.|- -+| ..+|++|+... ...... -+....++....+++.++...... ......+|
T Consensus 324 ~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s-~~~~v~~L 402 (500)
T COG1129 324 RIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPS-PEQPIGTL 402 (500)
T ss_pred cCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCC-ccchhhcC
Confidence 877766 5666799999987 355 55999998642 111101 233444555566777765433222 22445679
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeee
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 1124 (1293)
|||++||+.|||+|..+|+||||||||.|+|..++.+|++.|+++. +|.+||+||.++.++.. ||||+||.+|+++..
T Consensus 403 SGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e 482 (500)
T COG1129 403 SGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGE 482 (500)
T ss_pred CchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999976 57999999999999875 999999999999986
Q ss_pred cChhh
Q 000774 1125 DTPEE 1129 (1293)
Q Consensus 1125 g~~~e 1129 (1293)
-+.++
T Consensus 483 ~~~~~ 487 (500)
T COG1129 483 LDREE 487 (500)
T ss_pred ecccc
Confidence 44443
No 95
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-57 Score=565.02 Aligned_cols=469 Identities=16% Similarity=0.134 Sum_probs=343.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 637 QVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTF 716 (1293)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~ 716 (1293)
..++.++..++....+.+...++|.++++++++.|+.+|+++++|++++|+++|++.+...+. .+..++..++.+++.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~ 139 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSA 139 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 345667888888899999999999999999999999999999999999999999999987654 3555666777777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHH---HHHHHHHHHHH
Q 000774 717 VLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY---DRMADINGKSM 793 (1293)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~---~~~~~~~~~~~ 793 (1293)
+++++++|.+.+++++.+++.+.+..++.+..++..+......+.+.+.+.|.++|+++++ ++.+ +++.+++.+..
T Consensus 140 ~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~ 218 (547)
T PRK10522 140 AYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDA 218 (547)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHH
Confidence 8888888887776665555544444444444444444445667788899999999999995 4432 34555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 794 DKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENS 873 (1293)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 873 (1293)
+...+.................++... +++.+.+.. +..+.. ..+.++.+..+...+..++..+......+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~ 292 (547)
T PRK10522 219 QEYRHHIIRADTFHLSAVNWSNIMMLG---AIGLVFYMA-NSLGWA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSA 292 (547)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-HHhhcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544433322221111111111111111 111111111 100000 01122222333334556788888888888999
Q ss_pred HHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHH
Q 000774 874 LNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSML 953 (1293)
Q Consensus 874 ~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll 953 (1293)
..+.+|+.++.+.+.+.... ...+ .+..+.++++||+|+|+++ +++|+|+||+|+|||++||+||||||||||+
T Consensus 293 ~~a~~ri~~l~~~~~~~~~~--~~~~---~~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~ 366 (547)
T PRK10522 293 QVAFNKLNKLALAPYKAEFP--RPQA---FPDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTLA 366 (547)
T ss_pred HHHHHHHHHHhccccccccc--cccc---cCcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHHH
Confidence 99999999987544332110 1111 1112469999999999743 3699999999999999999999999999999
Q ss_pred HHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccC
Q 000774 954 NTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSL 1033 (1293)
Q Consensus 954 ~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~ 1033 (1293)
++|+|+++|++|+|.+||.|+++.+...+|++|+||||++.+|++|+++| ....++++++++++.+++.+.+.. |.
T Consensus 367 ~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~ 442 (547)
T PRK10522 367 MLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-ED 442 (547)
T ss_pred HHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cc
Confidence 99999999999999999999999999999999999999999999999998 223456666666666655544432 22
Q ss_pred CcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhccC
Q 000774 1034 GLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCD 1111 (1293)
Q Consensus 1034 gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d 1111 (1293)
+. ..|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. .++|+|+||||++.+..||
T Consensus 443 ~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d 517 (547)
T PRK10522 443 GR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHAD 517 (547)
T ss_pred cC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCC
Confidence 21 1367899999999999999999999999999999999999999999987654 4799999999999999999
Q ss_pred EEEEEeCCeEeee-cChh
Q 000774 1112 RILLLDSGRVLEY-DTPE 1128 (1293)
Q Consensus 1112 ~i~vl~~G~i~~~-g~~~ 1128 (1293)
+|++|++|++++. |++.
T Consensus 518 ~i~~l~~G~i~e~~~~~~ 535 (547)
T PRK10522 518 RLLEMRNGQLSELTGEER 535 (547)
T ss_pred EEEEEECCEEEEecCCch
Confidence 9999999999987 4433
No 96
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.9e-57 Score=511.81 Aligned_cols=523 Identities=19% Similarity=0.228 Sum_probs=378.1
Q ss_pred HHHHHHHHHhhhhhhhhhhccCCCcCCCCc-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 000774 594 CYFLTETLRVSSSTWLSYWTDQSSLKTHGP-LF-YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAP 671 (1293)
Q Consensus 594 ~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p 671 (1293)
+..+...+.+..|.|+-..-|........+ +. ...+...+.+.+.++..+++.++...+.+....+...+|...+++|
T Consensus 31 fS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~ 110 (580)
T COG4618 31 FSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAP 110 (580)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhH
Confidence 334445555556666654445443322222 22 3334445566788889999999999999999999999999988776
Q ss_pred ccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 672 MVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREV 751 (1293)
Q Consensus 672 ~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 751 (1293)
..--......+. -+|+++++.++...-...+...-..-..+.+++.+.|++.++.+...++++.+..+-....++-
T Consensus 111 l~~~~~g~~~Q~----LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p 186 (580)
T COG4618 111 LLRRGSGDGLQP----LRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKP 186 (580)
T ss_pred HhhcCCCccccc----hhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 653322222222 2577777776654333333333334455666777777776665555444444433333333333
Q ss_pred HHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Q 000774 752 KRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIV----GGLMIWLTAT 827 (1293)
Q Consensus 752 ~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 827 (1293)
-+...+.....+.+...+.++.++|++.+......+++.+....+........-.+..++.....+ -..+..+.++
T Consensus 187 ~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~ 266 (580)
T COG4618 187 LKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAW 266 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccee
Confidence 333333444556677889999999999988777766666554444433322222222222111111 1112222222
Q ss_pred HHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCc
Q 000774 828 FAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSG 907 (1293)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g 907 (1293)
+. ..+..+....+++. ..+.....++...+..|..+.....+..|+.+.+...++....... ...+|
T Consensus 267 Lv--i~ge~t~G~mIA~S-----Il~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~L------P~P~g 333 (580)
T COG4618 267 LV--IKGEITPGMMIAGS-----ILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERMPL------PAPQG 333 (580)
T ss_pred eE--EcCcCCcchhhHHH-----HHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCC------CCCCc
Confidence 22 23333322111111 1122344577777888888888899999999998754443221111 12357
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.+.++++++.=++..+++|+|+||++.+||-+|||||||||||||.|+|.|.++|.+|.|++||.|+.+++++++-++||
T Consensus 334 ~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiG 413 (580)
T COG4618 334 ALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIG 413 (580)
T ss_pred eeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccC
Confidence 79999999976666678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 988 IIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
|+||+-.||+|||.|||.-+. +.+++.+.+|++.++.||.|.++|+||||.+++.|..||||||||++|||||..+|.+
T Consensus 414 YLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~l 493 (580)
T COG4618 414 YLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFL 493 (580)
T ss_pred cCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcE
Confidence 999999999999999997555 6677889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
++||||-|+||.+-|+.+.++|.+.. +|+|+|+||||.+.+..+|+|++|++|++..+|+.+|.+++
T Consensus 494 vVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 494 VVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999998865 58999999999999999999999999999999999999864
No 97
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.3e-58 Score=507.75 Aligned_cols=468 Identities=22% Similarity=0.341 Sum_probs=373.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-hHHHHH
Q 000774 38 VGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNEL-GVASLL 115 (1293)
Q Consensus 38 ~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~-~l~~~~~~~~~~i~~~~~l~~~~-~~~~l~ 115 (1293)
.+......+-...|.++.+|+..++.+..+|.+..-+.....-++.+.. .+..+....+-+.+.++++++.. ||.+++
T Consensus 9 v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~ 88 (497)
T COG5265 9 VGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALT 88 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHH
Confidence 3344445666778999999999999999999887777666666666543 34444555566666666555544 445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 116 GALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAAC 195 (1293)
Q Consensus 116 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1293)
.++.+.++..+.......-....++..+.-.+......+.+-+.+++|.|+-|+.+..++.+..+.+.+...+...-..+
T Consensus 89 t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~ 168 (497)
T COG5265 89 TLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLV 168 (497)
T ss_pred HHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHH
Confidence 55544444433333322233445566666667777888999999999999999999999888777776665554332222
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccC
Q 000774 196 NSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILL 273 (1293)
Q Consensus 196 ~~~~~~~~~--~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~ 273 (1293)
..+....+. ........+...+..|.+|+|.++....+...+..|+..++..+..+.+++.-.++..+++..+.+...
T Consensus 169 Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d 248 (497)
T COG5265 169 LNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSD 248 (497)
T ss_pred HHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhcc
Confidence 222221111 122333445556678999999999999999999999999999999999999999999999887655422
Q ss_pred C-C-CCCC-CCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----
Q 000774 274 P-N-PPLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---- 346 (1293)
Q Consensus 274 ~-~-~~~~-~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---- 346 (1293)
. + ++.. .....+.|+||+|.|.+ .+++|+++||++++|+++|+||++|+||||++++|.++|++.+|....
T Consensus 249 ~pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qd 326 (497)
T COG5265 249 APDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQD 326 (497)
T ss_pred CCCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchh
Confidence 1 1 1122 22346999999999974 689999999999999999999999999999999999999999995432
Q ss_pred --------ecCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 347 --------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 347 --------~~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
+|+.||.|||+..||++|+..||.+|++ .+++++.++++.++++++++.+|+|++|.+||+|-.||||+||
T Consensus 327 ir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekq 406 (497)
T COG5265 327 IRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQ 406 (497)
T ss_pred HHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHH
Confidence 3456999999999999999999999986 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHh
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
||||||+++++|+||+|||+||+||.+|++.|... ++...+|+|.++|+||++++-.||.|+||++|+|++.|+|++|+
T Consensus 407 rvaiar~ilk~p~il~~deatsaldt~te~~iq~~-l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll 485 (497)
T COG5265 407 RVAIARTILKNPPILILDEATSALDTHTEQAIQAA-LREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELL 485 (497)
T ss_pred HHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHH
Confidence 99999999999999999999999999999999765 45567899999999999999999999999999999999999999
Q ss_pred hccHHHHHHHH
Q 000774 498 NNGELFQKLME 508 (1293)
Q Consensus 498 ~~~~~~~~~~~ 508 (1293)
..+|.|++||.
T Consensus 486 ~~~g~ya~mw~ 496 (497)
T COG5265 486 AAGGLYAEMWR 496 (497)
T ss_pred HcCChHHHHhc
Confidence 99999999984
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3.6e-55 Score=545.33 Aligned_cols=452 Identities=19% Similarity=0.248 Sum_probs=342.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 28 EAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYN 107 (1293)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~~l~~~~~~~~~~i~~~~~l~~ 107 (1293)
.....+...+++.++...+|..+|+|++++|..++++.++|++++++++|++.+..++..+..++..++.++++++++++
T Consensus 65 ~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~ 144 (547)
T PRK10522 65 TLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAW 144 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556677888999999999999999999999999999999999999999998665667777778888888888888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch---HHHHHHHHHHHHHHHH
Q 000774 108 ELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWE---NSFQSKVQNVRNDELS 184 (1293)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e---~~~~~~~~~~~~~~~~ 184 (1293)
..|.++++.++++++.+++..++.++.++..++..+..++..+.+.|.++|+++++ ++.+ +.+.+++++..++..+
T Consensus 145 ~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~ 223 (547)
T PRK10522 145 LSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRH 223 (547)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHh
Confidence 88888888888777777777888888888888889999999999999999999996 3333 3455666665554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 185 WFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGG---DLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRM 261 (1293)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri 261 (1293)
...+..........+..... .+.++.+.+.++ ..+.+.+..+..+...+..|+..+...+..+..+..+++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri 299 (547)
T PRK10522 224 HIIRADTFHLSAVNWSNIMM----LGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKL 299 (547)
T ss_pred hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333332222222211111 111221222211 12233333333333345679999999999999999999999
Q ss_pred HHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000774 262 EEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS 341 (1293)
Q Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~ 341 (1293)
.++++.+++...+.+...+....|+++|++|+|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++
T Consensus 300 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~ 377 (547)
T PRK10522 300 NKLALAPYKAEFPRPQAFPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQS 377 (547)
T ss_pred HHHhccccccccccccccCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 99876543221111111111246999999999973 3579999999999999999999999999999999999999999
Q ss_pred CCce------------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCC
Q 000774 342 DASA------------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 409 (1293)
Q Consensus 342 g~~~------------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~ 409 (1293)
|... .+++.|+||+|++++|++|+++| +...++++++++++.+++..++.. +++. .+|.
T Consensus 378 G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~ 448 (547)
T PRK10522 378 GEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNL 448 (547)
T ss_pred eEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCC
Confidence 8432 13567999999999999999999 444566777778888877665543 3221 1478
Q ss_pred CCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEE
Q 000774 410 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVK 488 (1293)
Q Consensus 410 ~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~ 488 (1293)
+||||||||++||||++++|+++|||||||+||+++++.+.+.+.+... +++|+|+||||++.+..||+|++|++|+++
T Consensus 449 ~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 528 (547)
T PRK10522 449 KLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLS 528 (547)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999887654432 489999999999999999999999999999
Q ss_pred Ee-cChHH
Q 000774 489 EE-GTFED 495 (1293)
Q Consensus 489 ~~-g~~~~ 495 (1293)
+. |++.+
T Consensus 529 e~~~~~~~ 536 (547)
T PRK10522 529 ELTGEERD 536 (547)
T ss_pred EecCCchh
Confidence 85 44433
No 99
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.4e-57 Score=515.08 Aligned_cols=448 Identities=24% Similarity=0.390 Sum_probs=341.9
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeec--------------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------- 348 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~-------------- 348 (1293)
+.++++++++.|+ +-.+++||||+|++||++||+|+||+|||||+++|.|+|+|++|. +.+.
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~Ge-I~v~G~~v~~~sP~dA~~ 78 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGE-IRVDGKEVRIKSPRDAIR 78 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcce-EEECCEEeccCCHHHHHH
Confidence 4689999999997 467999999999999999999999999999999999999999994 3332
Q ss_pred CcEEEEcCCcccc-CccHHHHHccCCCC------CH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 349 GTVAYVPQVSWIF-NATVRDNILFGSAF------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~-~~Tv~eni~~g~~~------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
..||+|+|++.|+ +.||.|||.+|.+. +. +++.+..+..++.-+ ..+....||-|+||
T Consensus 79 ~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vd-----------p~~~V~dLsVG~qQ 147 (501)
T COG3845 79 LGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVD-----------PDAKVADLSVGEQQ 147 (501)
T ss_pred cCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCC-----------ccceeecCCcchhH
Confidence 3599999999997 67999999999753 22 233333444443322 23455789999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
||.|-+|||++|++|||||||+.|-|...+.+++.+.+....|+|||+|||++.++.. |||+.||.+|+++..-++.
T Consensus 148 RVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~~-- 225 (501)
T COG3845 148 RVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDPV-- 225 (501)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecCC--
Confidence 9999999999999999999999999999999999887778889999999999999876 8999999999976432100
Q ss_pred hhccHHHHHHHHHhchhhhhhhhcccCccccCCCCCCCCCCCCCCCCCccccccccccccccchhhhhhhcCcccHHHHH
Q 000774 497 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 576 (1293)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 576 (1293)
. . .. .++
T Consensus 226 ~------------------------------------~---------------------~t---~~e------------- 232 (501)
T COG3845 226 A------------------------------------E---------------------TT---EEE------------- 232 (501)
T ss_pred C------------------------------------C---------------------CC---HHH-------------
Confidence 0 0 00 000
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 577 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 656 (1293)
Q Consensus 577 ~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 656 (1293)
T Consensus 233 -------------------------------------------------------------------------------- 232 (501)
T COG3845 233 -------------------------------------------------------------------------------- 232 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 657 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 736 (1293)
Q Consensus 657 ~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 736 (1293)
T Consensus 233 -------------------------------------------------------------------------------- 232 (501)
T COG3845 233 -------------------------------------------------------------------------------- 232 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 737 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 816 (1293)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1293)
+.++
T Consensus 233 --------------la~l-------------------------------------------------------------- 236 (501)
T COG3845 233 --------------LAEL-------------------------------------------------------------- 236 (501)
T ss_pred --------------HHHH--------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCccccCC
Q 000774 817 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 896 (1293)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~e~~~~~~~ 896 (1293)
++ + .-+..+.+
T Consensus 237 -------------Mv--G-----------------------------------------------~~v~~~~~------- 247 (501)
T COG3845 237 -------------MV--G-----------------------------------------------REVVLRVV------- 247 (501)
T ss_pred -------------hc--C-----------------------------------------------Cccccccc-------
Confidence 00 0 00000000
Q ss_pred CCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeec-C
Q 000774 897 NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDI-A 975 (1293)
Q Consensus 897 ~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i-~ 975 (1293)
..+..|...-++++|++..-+.+ .+.+++|||+|.+||++||.|-.|-|-+.|+.+|+|+.+|.+|+|.++|.|+ .
T Consensus 248 --~~~~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~ 324 (501)
T COG3845 248 --KPPSTPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLG 324 (501)
T ss_pred --cCCCCCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccc
Confidence 00011223358999999875432 3689999999999999999999999999999999999999999999999997 7
Q ss_pred CCChHHHhhh-ceEEccccc----cccccHhhhcCCCCCC-----CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCC
Q 000774 976 KFGLMDLRKI-LGIIPQSPV----LFSGTVRFNLDPFSEH-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1045 (1293)
Q Consensus 976 ~~~~~~~r~~-i~~v~Q~~~----lf~~ti~~nl~~~~~~-----~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~ 1045 (1293)
..++...|+. ++|||.|.. ..+.|+.||+.+.... +..-+..-.-.....+.++++.-.- .-......+
T Consensus 325 ~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~-~~~~~~a~~ 403 (501)
T COG3845 325 RLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRA-PSPDAPARS 403 (501)
T ss_pred cCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccC-CCCCcchhh
Confidence 7788887775 999999983 4466999998532111 1000111111122334555532210 112234567
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEee
Q 000774 1046 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1123 (1293)
Q Consensus 1046 LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 1123 (1293)
||||++||+-+||-|.++|++||..+||.|||..+.+.|.+.|.+.. .|+.|++||-+++++.. ||||.||.+|+++.
T Consensus 404 LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~ 483 (501)
T COG3845 404 LSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVG 483 (501)
T ss_pred cCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceec
Confidence 99999999999999999999999999999999999999999998876 47899999999999877 99999999999998
Q ss_pred ecChhh
Q 000774 1124 YDTPEE 1129 (1293)
Q Consensus 1124 ~g~~~e 1129 (1293)
...+++
T Consensus 484 ~~~~~~ 489 (501)
T COG3845 484 IVPPEE 489 (501)
T ss_pred cccccc
Confidence 877765
No 100
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.2e-55 Score=559.36 Aligned_cols=472 Identities=21% Similarity=0.278 Sum_probs=388.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000774 35 VMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVAS 113 (1293)
Q Consensus 35 ~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~i~~~~~l~~~~~~~~ 113 (1293)
....+.+.-..|-..+++++++-|..+|+..++|.|+||++.|++.++..+ ..+..++...+.++..++++-+..++..
T Consensus 882 ~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fl 961 (1381)
T KOG0054|consen 882 FAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFL 961 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHH
Confidence 334556677778888899999999999999999999999999999999855 3455555666666666667777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 114 LLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLA 193 (1293)
Q Consensus 114 l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1293)
++.+.+.++++.+..++.+..+...+-....++-..+.++|.+.|+.+|++|+.++.|.++..+..+...+........+
T Consensus 962 i~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~ 1041 (1381)
T KOG0054|consen 962 IAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISAN 1041 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 77777777777777777777777777777778888999999999999999999999999999888887666544433334
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 000774 194 ACNSFILNSIPVLVTVVSF-GMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKIL 272 (1293)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~ 272 (1293)
.+..+-+.++..++++.+. .+.+...+.+++|.+-..+++.-.+..-+..+......+-+..+|.+||.++.+.|++.+
T Consensus 1042 RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p 1121 (1381)
T KOG0054|consen 1042 RWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAP 1121 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCC
Confidence 4444444554443333222 222222233778999888888888888888889999999999999999999998765521
Q ss_pred C---CC--CCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCce--
Q 000774 273 L---PN--PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASA-- 345 (1293)
Q Consensus 273 ~---~~--~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~-- 345 (1293)
. .. ++.=|..+.|+|+|++.+|.+ +.++||+||||+|++||+|||||++|||||||+++|-++.+|.+|.+.
T Consensus 1122 ~~~~~~~pp~~WP~~G~I~f~~~~~RYrp-~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~ID 1200 (1381)
T KOG0054|consen 1122 LEIEESRPPPSWPSKGEIEFEDLSLRYRP-NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILID 1200 (1381)
T ss_pred CCCcCCCCCCCCCCCCeEEEEEeEEEeCC-CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEc
Confidence 1 11 111123457999999999975 457899999999999999999999999999999999999999988432
Q ss_pred ----------eecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHH
Q 000774 346 ----------VIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 346 ----------~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
.+|++++.+||||.||+||||.|+-=-.++++++++++++.|+|.+.+..+|+|+++.+.|+|.|+|-||
T Consensus 1201 gvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQ 1280 (1381)
T KOG0054|consen 1201 GVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQ 1280 (1381)
T ss_pred CeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHH
Confidence 2577899999999999999999997555688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||-++|||||+++++||+|||+|+++|++|...| +..++..-+++|||.|+||++++.++|||+|||+|+++|.|+|++
T Consensus 1281 RQLlCLARALLr~skILvLDEATAsVD~~TD~lI-Q~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~ 1359 (1381)
T KOG0054|consen 1281 RQLLCLARALLRKSKILVLDEATASVDPETDALI-QKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAE 1359 (1381)
T ss_pred HHHHHHHHHHhccCCEEEEecccccCChHHHHHH-HHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHH
Confidence 9999999999999999999999999999987666 456677778999999999999999999999999999999999999
Q ss_pred Hhhc-cHHHHHHHH
Q 000774 496 LSNN-GELFQKLME 508 (1293)
Q Consensus 496 l~~~-~~~~~~~~~ 508 (1293)
|+++ ++.|+.+..
T Consensus 1360 Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1360 LLSDKDSLFSSLLK 1373 (1381)
T ss_pred HHhCCcchHHHHHH
Confidence 9987 556655544
No 101
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2e-53 Score=536.28 Aligned_cols=510 Identities=15% Similarity=0.147 Sum_probs=386.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccCCCcCCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 587 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL-----FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 661 (1293)
Q Consensus 587 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 661 (1293)
.+++.+++.++...+.+..|.+.+..++.......... .+..++.++.+...+..++..++......+...++|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666677778888888888877765432111111 1222233334445555566666666677777778888
Q ss_pred HHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000774 662 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGI-VSTMSLWAIMPLLLLFYAA 740 (1293)
Q Consensus 662 ~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~ 740 (1293)
.++++....++.||+. ++|++++|+++|++.+.+.+...+..++..++.++..++.++. .+|.+.++++..+++.+.+
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888877788888886 7899999999999999999988888888888887776666664 7777766666666666666
Q ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000774 741 YLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGG- 819 (1293)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 819 (1293)
.+++.+...+..+......+.+.+...|.++|+++|++|+.++...+++.+..+...+..........+......++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 6777777777777788888899999999999999999999999988888888877777766666666666555554432
Q ss_pred ---HHHHHHHHH-HHHhc----CcccchhhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 000774 820 ---LMIWLTATF-AVVQN----GSAENQEAFASTMGLLLS---YALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 888 (1293)
Q Consensus 820 ---~~~~~~~~~-~~~~~----~~~~~~~~~~~~~g~~l~---~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~~~ 888 (1293)
.+.++++.. .+... +..+. ...++.++. +...+..++..+......++....+.+|+.++++.++
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~----g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSE----EELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222212 22211 22221 122332333 3456677888888889999999999999999987533
Q ss_pred CCc-------cccC--CC----C-----C--CCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCC
Q 000774 889 EAP-------LVIE--SN----R-----P--PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAG 948 (1293)
Q Consensus 889 e~~-------~~~~--~~----~-----~--~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsG 948 (1293)
+.. ...+ .. . + .......+.|+++||+++|+++ +++|+|+||+|++||++||+||||||
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsG 490 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCG 490 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCC
Confidence 210 0000 00 0 0 0000123569999999999643 36999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCC--------CCCCHHHHHHHHH
Q 000774 949 KSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF--------SEHSDADLWEALE 1020 (1293)
Q Consensus 949 KSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~--------~~~~~~~~~~~l~ 1020 (1293)
||||+++|+|+++|++|+|.+++ |++++||||+|.+|++|++||+.+. ...++++++++++
T Consensus 491 KSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~ 559 (659)
T TIGR00954 491 KSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILD 559 (659)
T ss_pred HHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHH
Confidence 99999999999999999998863 5689999999999999999999753 2245778999999
Q ss_pred HhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEE
Q 000774 1021 RAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLII 1100 (1293)
Q Consensus 1021 ~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~v 1100 (1293)
.+++.+++++ |.|+|+..+ .+.+||||||||++||||++++|++|||||||++||+++++.+++.+++ .++|+|+|
T Consensus 560 ~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~--~~~tvI~i 635 (659)
T TIGR00954 560 NVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE--FGITLFSV 635 (659)
T ss_pred HcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH--cCCEEEEE
Confidence 9999999988 899999876 5678999999999999999999999999999999999999999999987 48999999
Q ss_pred ecCcchhhccCEEEEEe
Q 000774 1101 AHRLNTIIDCDRILLLD 1117 (1293)
Q Consensus 1101 tH~~~~~~~~d~i~vl~ 1117 (1293)
|||++++..||++++|+
T Consensus 636 sH~~~~~~~~d~il~l~ 652 (659)
T TIGR00954 636 SHRKSLWKYHEYLLYMD 652 (659)
T ss_pred eCchHHHHhCCEEEEEe
Confidence 99999998899999997
No 102
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=6.6e-53 Score=531.63 Aligned_cols=457 Identities=17% Similarity=0.150 Sum_probs=356.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000774 20 GVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRI 98 (1293)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~-~~l~~~~~~~~~~ 98 (1293)
..++..++.+...+...++..++...++...|++....+..++++ ++|++.+++++|++.+.+.+ ..+..++..++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~i 226 (659)
T TIGR00954 148 ASFINSAIKYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDV 226 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444333334445555566666666666655555556654 68999999999999999855 4566677777777
Q ss_pred HHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Q 000774 99 IISLVLLYN-ELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQN 177 (1293)
Q Consensus 99 i~~~~~l~~-~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~~~~~~~~ 177 (1293)
+++++.++. ..+.++++.++.+++.+.+..++.+++.+..++.++..++..+...|.++|+++||.|+.|+...+++++
T Consensus 227 i~~~~~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~ 306 (659)
T TIGR00954 227 ILYSFKLLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMS 306 (659)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHH
Confidence 777776775 5555667777777777788888999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHh-----cCCCCHHHHHH-HHH---HHHHHHHHHHHH
Q 000774 178 VRNDELSWFRKAQFLAACNSFILNSIPV----LVTVVSFGMFTLL-----GGDLTPARAFT-SLS---LFAVLRFPLFML 244 (1293)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~-----~~~lt~~~~~~-~l~---~~~~l~~pl~~l 244 (1293)
..++..+...+.....+....+..++.. .+.++..|...+. .|.+|.|..++ ++. ++..+..|+..+
T Consensus 307 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l 386 (659)
T TIGR00954 307 SFYRLVEHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRL 386 (659)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887777766666655555444332 2222222332222 26788887665 333 356668899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccC--------CC-----------------CCCCCCCCcEEEEeeEEEcCCCCC
Q 000774 245 PNMITQVVNANVSLKRMEEFLLAEEKILL--------PN-----------------PPLTSGLPAISIRNGYFSWDSKAE 299 (1293)
Q Consensus 245 ~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~--------~~-----------------~~~~~~~~~i~~~~~~~~y~~~~~ 299 (1293)
...+..++++.++.+||.++++.+++... +. .........|+++|++|.|++ +
T Consensus 387 ~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~ 464 (659)
T TIGR00954 387 MLAGRDMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--G 464 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--C
Confidence 99999999999999999999976443210 00 000112235999999999963 3
Q ss_pred CCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-ecCcEEEEcCCccccCccHHHHHccCC-----
Q 000774 300 RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-IRGTVAYVPQVSWIFNATVRDNILFGS----- 373 (1293)
Q Consensus 300 ~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-~~~~i~~v~Q~~~l~~~Tv~eni~~g~----- 373 (1293)
+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++||||+|++|++|++|||.++.
T Consensus 465 ~~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~ 544 (659)
T TIGR00954 465 DVLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDM 544 (659)
T ss_pred CeeeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhh
Confidence 57999999999999999999999999999999999999999884322 245799999999999999999999873
Q ss_pred ---CCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHH
Q 000774 374 ---AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVF 450 (1293)
Q Consensus 374 ---~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~ 450 (1293)
..++++++++++.+++.+.++. |.|++|..+ .+.+||||||||++|||||+++|+++|||||||+||+++++++.
T Consensus 545 ~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~ 622 (659)
T TIGR00954 545 KRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMY 622 (659)
T ss_pred hccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHH
Confidence 2345678889999999988877 889999876 56799999999999999999999999999999999999999998
Q ss_pred HHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeC
Q 000774 451 DRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 484 (1293)
Q Consensus 451 ~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~ 484 (1293)
+.+.+ .|+|+|+||||++.++.||++++|+.
T Consensus 623 ~~l~~---~~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 623 RLCRE---FGITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHH---cCCEEEEEeCchHHHHhCCEEEEEeC
Confidence 76543 37999999999999999999999973
No 103
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=7e-53 Score=479.86 Aligned_cols=200 Identities=22% Similarity=0.310 Sum_probs=164.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.+.+.||+|+|+++. .++++++|-|.+++++|+|||||+|||||+|+++|.+.|+.|.|.-.-. .+++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 489999999998664 6899999999999999999999999999999999999999999976522 2355
Q ss_pred EEccccc---cccccHhhhcCC-CC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSPV---LFSGTVRFNLDP-FS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~~---lf~~ti~~nl~~-~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+..|+.. .++.+.-++..+ +. ....++++..+.++|+....+..| ..+||+|||.||++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p----------~~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVP----------MSQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccc----------hhhcccccchhHHHHHHHhc
Confidence 5566542 334466666542 33 245577888888888764433333 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeee-cChhhhh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY-DTPEELL 1131 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~-g~~~el~ 1131 (1293)
+|.+|||||||+|||.++...+.++|.+ +.++||+||||...+.+ +++|++.++|.+... |+.....
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe--~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk 595 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINE--FPGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYK 595 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhc--cCCceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHH
Confidence 9999999999999999999999999988 67899999999999988 999999999988765 6665544
No 104
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5e-50 Score=454.25 Aligned_cols=200 Identities=19% Similarity=0.305 Sum_probs=166.3
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
..+++.+|+|.|.++.++.+.++++.+..-+++++||+||+||||+++++.|...|..|.+.+. -|.+|
T Consensus 361 p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~-----------~r~ri 429 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRH-----------PRLRI 429 (582)
T ss_pred CeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeec-----------cccee
Confidence 3589999999998775579999999999999999999999999999999999999999998876 36789
Q ss_pred eEEccccccc-cccHhh--hc-CCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 987 GIIPQSPVLF-SGTVRF--NL-DPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 987 ~~v~Q~~~lf-~~ti~~--nl-~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+|..|...=| +..+.. -+ ..++..+++++++.+...|+..-+..- ....||||||-||++|.....
T Consensus 430 ~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~----------si~~LSGGQKsrvafA~~~~~ 499 (582)
T KOG0062|consen 430 KYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQ----------SIASLSGGQKSRVAFAACTWN 499 (582)
T ss_pred cchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhc----------cccccCCcchhHHHHHHHhcC
Confidence 9999987533 333221 11 123334788899888886665433221 135699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeee-cChhh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY-DTPEE 1129 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~-g~~~e 1129 (1293)
+|++|+|||||++||.++...+-++|+. .++.||+||||.+++.. |+.+|+.++|+|... |+.++
T Consensus 500 ~PhlLVLDEPTNhLD~dsl~AL~~Al~~--F~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~~~ 566 (582)
T KOG0062|consen 500 NPHLLVLDEPTNHLDRDSLGALAKALKN--FNGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGIDK 566 (582)
T ss_pred CCcEEEecCCCccccHHHHHHHHHHHHh--cCCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccHHH
Confidence 9999999999999999999999999998 56779999999999988 999999999999764 44433
No 105
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=8.8e-49 Score=441.84 Aligned_cols=239 Identities=36% Similarity=0.691 Sum_probs=223.5
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
|.|+++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|.+||.++..++...+|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 3589999999996544579999999999999999999999999999999999998 789999999999999999999999
Q ss_pred eEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 987 GIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 987 ~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
+|+||+|.+|++|+++|++++...++++++++++.+++.+++.++|.++++.+++.|.+||||||||++||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987766678899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHHHhhc
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTG 1146 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~~~~~ 1146 (1293)
|||||||++||+.+.+.+++.|++...++|||+||||++++..||||++|++|++++.|+|+++++. .+.|++++...+
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999988778999999999999988999999999999999999999984 467788877654
Q ss_pred c
Q 000774 1147 A 1147 (1293)
Q Consensus 1147 ~ 1147 (1293)
.
T Consensus 239 ~ 239 (275)
T cd03289 239 R 239 (275)
T ss_pred h
Confidence 3
No 106
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-49 Score=404.15 Aligned_cols=219 Identities=28% Similarity=0.481 Sum_probs=187.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecC-CCChHHHhhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA-KFGLMDLRKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~-~~~~~~~r~~i 986 (1293)
.|+++||+++|+.. .+|+|||++|.+||+++|+||||||||||+++|.|+-+|++|+|.+||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 38999999999864 6999999999999999999999999999999999999999999999998764 33678899999
Q ss_pred eEEccccccccc-cHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
|+|+|+..||.. |+.||+.... ..+.++.++ .+.+++++ .|+....+..+.+||||||||+||||||.
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~-----~A~~lL~~--VGL~~ka~~yP~qLSGGQqQRVAIARALa 152 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE-----KALELLEK--VGLADKADAYPAQLSGGQQQRVAIARALA 152 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHH-----HHHHHHHH--cCchhhhhhCccccCcHHHHHHHHHHHHc
Confidence 999999999987 9999996432 222222211 12233333 25555555566789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCC
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 1135 (1293)
.+|+++|+|||||+|||+...++.+.++++.. |.|+|+|||++.++.+ ||||+.|++|+|++.|+|+++..++.
T Consensus 153 M~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 153 MDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred CCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999774 7899999999999988 99999999999999999999987653
No 107
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-47 Score=396.30 Aligned_cols=222 Identities=31% Similarity=0.522 Sum_probs=192.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+|+|||++|++. .+++|+||+|++||.+.++|||||||||++|+|.|+++|++|+|+++|.+++++++..+|++|||
T Consensus 2 I~~~nvsk~y~~~--~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGNK--KAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCCc--eeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 7999999999854 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc--hhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 989 IPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD--AQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~--~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|-|...||.. ||.+|+...+ .++.+++.+ ...+.+... ||+ ....+.++.|||||+||+.+||||..
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~-----r~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALAa 152 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKK-----RADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALAA 152 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHH-----HHHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHhc
Confidence 9999999976 9999997543 233333322 122333322 333 24555667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHH
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 1139 (1293)
+|+|||+|||+++|||-++..+++-+.++.+ ++|+|+||||++++.. +|||.+|++|+++.+++|++++.++...|-
T Consensus 153 dP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV 232 (309)
T COG1125 153 DPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFV 232 (309)
T ss_pred CCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHH
Confidence 9999999999999999999999999988654 7999999999999766 999999999999999999999987755444
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-47 Score=409.62 Aligned_cols=216 Identities=31% Similarity=0.453 Sum_probs=186.9
Q ss_pred EEEEEEEEEecCC---CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH---HH
Q 000774 909 IKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DL 982 (1293)
Q Consensus 909 i~~~~v~~~y~~~---~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~ 982 (1293)
|++++|++.|+.. ...+|+||||+|++||++||+|+||||||||++++.++-+|++|+|.+||.|+..++.. .+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999752 24699999999999999999999999999999999999999999999999998877754 56
Q ss_pred hhhceEEcccccccc-ccHhhhcCCCC---CCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 000774 983 RKILGIIPQSPVLFS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1054 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf~-~ti~~nl~~~~---~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl 1054 (1293)
|++||+++|++.|++ .||.+|+.+-- ..+. +++.+.|+.+| +..+.+..+.+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVg-----------L~dk~~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVG-----------LSDKADRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcC-----------ChhhhccCchhcCcchhhHH
Confidence 778999999999997 59999997421 2222 23444444444 44445555678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1055 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1055 ~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
+|||||..+|+|||+|||||+|||+|.+.|.+.|++..+ |-||++|||.|+.+++ ||||.||++|+++|.|+..|+.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998653 7899999999999998 9999999999999999999998
Q ss_pred hcCC
Q 000774 1132 SNEG 1135 (1293)
Q Consensus 1132 ~~~~ 1135 (1293)
.++.
T Consensus 231 ~~Pk 234 (339)
T COG1135 231 ANPK 234 (339)
T ss_pred cCcc
Confidence 7654
No 109
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-46 Score=383.95 Aligned_cols=203 Identities=32% Similarity=0.500 Sum_probs=180.4
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.|+++|++++|+ +..+|+|||++|++||+++|+|||||||||||++|.|+.+|++|.... +|.+
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 589999999996 468999999999999999999999999999999999999999984321 3457
Q ss_pred EEEEcCCcccc-CccHHHHHccCC----CCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGS----AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~----~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
+|+|+|+..|| ..||.|||.++. ..+ +++..+.++..++.+..+..|. +|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHH
Confidence 99999999998 789999999873 122 2334556888999988888884 899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhcc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
||||+.+|+++++|||||+|||+....+.+-+......|.|.|+|||.+.|.+. ||||+.|++|+|+++|+++++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999998777777889999999999999987 6999999999999999999998764
No 110
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-45 Score=421.37 Aligned_cols=226 Identities=23% Similarity=0.366 Sum_probs=197.4
Q ss_pred CCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecC-
Q 000774 902 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIA- 975 (1293)
Q Consensus 902 ~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~- 975 (1293)
.||..+.|+++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++.
T Consensus 74 ~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 74 DFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 478888999999999997544579999999999999999999999999999999999997 57999999999997
Q ss_pred -CCChHHHhhhceEEccccccccccHhhhcCCCC---CCCHHHH-----HHHHHHhhHHHHHHHccCCcchhhhcCCCCC
Q 000774 976 -KFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDADL-----WEALERAHLKDAIRRNSLGLDAQVSEAGENF 1046 (1293)
Q Consensus 976 -~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~~~~~~-----~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~L 1046 (1293)
..+...+|+.++||||+|.+|++|+++|+.+.. ..++++. .++++.+++ +.++++.+++.+.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccC
Confidence 344567889999999999999999999998432 2333333 333444433 345667788999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
|||||||++||||++++|+||||||||++||+.+.+.+++.|++..+++|+|+|||+++++.. ||||++|++|++++.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998888999999999999988 9999999999999999
Q ss_pred ChhhhhhcC
Q 000774 1126 TPEELLSNE 1134 (1293)
Q Consensus 1126 ~~~el~~~~ 1134 (1293)
+++++.+.+
T Consensus 307 ~~~~l~~~~ 315 (329)
T PRK14257 307 ETKTIFIHP 315 (329)
T ss_pred CHHHHhcCC
Confidence 999998644
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-45 Score=374.22 Aligned_cols=218 Identities=27% Similarity=0.452 Sum_probs=196.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCc-----ceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER-----GRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~-----G~I~i~g~~i~~--~~~~ 980 (1293)
.++++|+++.|+.. .+|+|||++|++++++|++|||||||||+|+++.++.+..+ |+|.++|.+|.+ +++-
T Consensus 7 ~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 7 AIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred eeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 48999999999854 69999999999999999999999999999999999998875 999999999976 4688
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC-------CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~-------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
.+|++||+|+|.|.-|..||.||+.+... .-++.+.++|+.+.+++.+.. .+.+.+..|||||+||
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQR 157 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQR 157 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHHH
Confidence 99999999999999999999999975421 124557888999999987653 3455677899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||||.-+|+|||||||||+|||.+...|++.|.++.++-|||+|||.|.-+.+ +|++..|..|+++|+|..+++..
T Consensus 158 LcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~ 237 (253)
T COG1117 158 LCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFT 237 (253)
T ss_pred HHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhc
Confidence 99999999999999999999999999999999999999889999999999999877 89999999999999999999986
Q ss_pred cC
Q 000774 1133 NE 1134 (1293)
Q Consensus 1133 ~~ 1134 (1293)
++
T Consensus 238 ~P 239 (253)
T COG1117 238 NP 239 (253)
T ss_pred Cc
Confidence 54
No 112
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-43 Score=400.29 Aligned_cols=238 Identities=50% Similarity=0.820 Sum_probs=216.3
Q ss_pred CCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhh
Q 000774 905 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 984 (1293)
Q Consensus 905 ~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~ 984 (1293)
..+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+++
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 35679999999999753346999999999999999999999999999999999999999999999999998888888899
Q ss_pred hceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 985 ILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
.|+|+||++.+|++|+++|+.+......+.+.++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999764333455677888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHHH
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 1142 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l~ 1142 (1293)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||||++|++|++++.|+++++.+..++.|..++
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 999999999999999999999999987678999999999999988999999999999999999999876555555444
No 113
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.1e-44 Score=391.44 Aligned_cols=211 Identities=34% Similarity=0.541 Sum_probs=187.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||+|++||+++|+||||||||||+|+|+|+++|.+|+|.+||.++.+++..++.+++||
T Consensus 3 L~~~~ls~~y~~~--~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 3 LEVENLSFGYGGK--PILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eEEEEEEEEECCe--eEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 7999999999854 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eccccc-cccccHhhhcCC--------CCCCCH---HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 000774 989 IPQSPV-LFSGTVRFNLDP--------FSEHSD---ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1056 (1293)
Q Consensus 989 v~Q~~~-lf~~ti~~nl~~--------~~~~~~---~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~l 1056 (1293)
|||.+. -|..||+|-+.. +...++ +.+.++++..++.++..+ ....||||||||+.|
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv~i 149 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRVLI 149 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHHHH
Confidence 999975 455599986532 222222 246777888777766544 346799999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1057 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1057 Arall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
||||.++|+||+|||||++||....-.+++.++++. ++.|+|+|.||++.+.+ ||++++|++|+++..|+|+|.+.
T Consensus 150 ArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 150 ARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 999999999999999999999999999999999976 36999999999998766 99999999999999999999985
No 114
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.8e-44 Score=374.03 Aligned_cols=215 Identities=30% Similarity=0.504 Sum_probs=187.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH---HHhh
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRK 984 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~r~ 984 (1293)
.|++++|+++|+++ .+++||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+.+++.. .+|+
T Consensus 8 ~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 8 LIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred eEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 59999999999765 699999999999999999999999999999999999999999999999999988865 4688
Q ss_pred hceEEccccccccc-cHhhhcCCC-C---CCCHHHHHH----HHHHhhHHHHHHHccCCcchh-hhcCCCCCChhHHHHH
Q 000774 985 ILGIIPQSPVLFSG-TVRFNLDPF-S---EHSDADLWE----ALERAHLKDAIRRNSLGLDAQ-VSEAGENFSVGQRQLL 1054 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~-ti~~nl~~~-~---~~~~~~~~~----~l~~~~l~~~i~~lp~gl~~~-~~~~~~~LSgGqkqrl 1054 (1293)
++|+++|+..||+. ||+||+.+. . ...+..+++ .++.+| |... ....+..||||+++|+
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VG-----------L~~~~~~~~PsELSGGM~KRv 154 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVG-----------LRGAAADLYPSELSGGMRKRV 154 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcC-----------CChhhhhhCchhhcchHHHHH
Confidence 99999999999976 999999742 2 334444433 233344 4333 3445678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1055 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1055 ~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
+||||+.-+|+||++||||+||||-+...+.+.|+++.+ +.|+++||||++++.. ||||+++.+|+|+..|+++|+.
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999998764 7899999999999887 9999999999999999999999
Q ss_pred hcCC
Q 000774 1132 SNEG 1135 (1293)
Q Consensus 1132 ~~~~ 1135 (1293)
+..+
T Consensus 235 ~sd~ 238 (263)
T COG1127 235 ASDD 238 (263)
T ss_pred hCCC
Confidence 7544
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=9.2e-44 Score=396.47 Aligned_cols=232 Identities=37% Similarity=0.603 Sum_probs=208.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|+....++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 47899999996433469999999999999999999999999999999999999999999999999988777788889999
Q ss_pred EccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000774 989 IPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1067 (1293)
Q Consensus 989 v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iL 1067 (1293)
+||++.+|+.|+++|+.+... ....++.+.++..++.+++..+|.++++..+..+.+||||||||++|||||+.+|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999998899999976432 3345566777778889999999999999888999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhcCCChHHHH
Q 000774 1068 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 1141 (1293)
Q Consensus 1068 lLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~l 1141 (1293)
||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++++++++ .+.|..+
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYL 233 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHH
Confidence 999999999999999999999998778999999999999977999999999999999999999865 3445443
No 116
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.2e-43 Score=389.29 Aligned_cols=219 Identities=68% Similarity=1.064 Sum_probs=204.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++...++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 2 DIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred cEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 58999999999754346999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000774 988 IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1067 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iL 1067 (1293)
|+||++.+|+.|+++|+.++.....+++.++++..++.+++.++|.|+++..++.+.+||||||||++|||||+.+|++|
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ll 161 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKIL 161 (221)
T ss_pred EECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999876555667788889999999999999999999998899999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecC
Q 000774 1068 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1068 lLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~ 1126 (1293)
||||||++||+.+++.+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+
T Consensus 162 llDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 162 VLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999877799999999999998899999999999998876
No 117
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.7e-43 Score=383.59 Aligned_cols=199 Identities=22% Similarity=0.324 Sum_probs=154.7
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.+-+.||+|.|++. .|.+++++|-|.--.+|+||||||.|||||+++|.|-++|+.|+.+-+ .|-+||
T Consensus 586 vLGlH~VtFgy~gq-kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQ-KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCC-CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 37899999999765 479999999999999999999999999999999999999999987644 355799
Q ss_pred EEccccc--cc-cccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhh-cCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPV--LF-SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVS-EAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~--lf-~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~-~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
+.-|+.. |- ..|-.|.|.-.-...-++.++.|...|+. ++.. -....||||||-|++||-.-++.
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~-----------sHAHTikikdLSGGQKaRValaeLal~~ 722 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLA-----------SHAHTIKIKDLSGGQKARVALAELALGG 722 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhh-----------hccceEeeeecCCcchHHHHHHHHhcCC
Confidence 9999863 22 23666665311122234555566554443 3222 13457999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccC-EEEEEeCCeEeee-cChhhhh
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCD-RILLLDSGRVLEY-DTPEELL 1131 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d-~i~vl~~G~i~~~-g~~~el~ 1131 (1293)
|+||||||||++||.++...+-++|.+ .++.||+||||-..+...| ..||+++-.|-+. |..+++.
T Consensus 723 PDvlILDEPTNNLDIESIDALaEAIne--y~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeDYk 790 (807)
T KOG0066|consen 723 PDVLILDEPTNNLDIESIDALAEAINE--YNGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFEDYK 790 (807)
T ss_pred CCEEEecCCCCCcchhhHHHHHHHHHh--ccCcEEEEecccceeeecCceEEEEccCChhhccccHHHHH
Confidence 999999999999999999999999998 5678999999999887632 4566766555543 6666654
No 118
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-43 Score=381.22 Aligned_cols=208 Identities=29% Similarity=0.448 Sum_probs=181.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++|++++|+.. ++|+||||+|++|+++||+||||||||||+|+|+|+++|++|+|.+.|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 48999999999865 59999999999999999999999999999999999999999999999988765332 56899
Q ss_pred EEccccc---cccccHhhhcCCCC-----------CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 988 IIPQSPV---LFSGTVRFNLDPFS-----------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 988 ~v~Q~~~---lf~~ti~~nl~~~~-----------~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
||||... -|..||+|-+.... ..+.+.+.++|+++++.++..+ ....|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-----------~i~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-----------QIGELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-----------cccccCcHHHHH
Confidence 9999763 46779999764321 1124678889999888776543 345799999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
+.|||||+.+|++|+|||||+|+|+.++..+.+.|+++.+ |+||++||||++.+.. ||+|+.|++ ++...|++++..
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhcc
Confidence 9999999999999999999999999999999999999875 7999999999999877 999999955 899999999998
Q ss_pred h
Q 000774 1132 S 1132 (1293)
Q Consensus 1132 ~ 1132 (1293)
+
T Consensus 227 ~ 227 (254)
T COG1121 227 T 227 (254)
T ss_pred C
Confidence 5
No 119
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-42 Score=429.38 Aligned_cols=199 Identities=28% Similarity=0.385 Sum_probs=164.6
Q ss_pred CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC--CcceEEECCeecCCCChHHHhhhceEEcccccccc-
Q 000774 921 ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFS- 997 (1293)
Q Consensus 921 ~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p--~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~- 997 (1293)
+.+..|+||+=-++||-.+||+|+||||||||+++|+|-..- .+|+|+++|.+..+ +..++.+|||.|++.-..
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 345799999999999999999999999999999999987543 37999999998754 678999999999996554
Q ss_pred ccHhhhcCCC------CCCCHHH----HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC-CE
Q 000774 998 GTVRFNLDPF------SEHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS-KI 1066 (1293)
Q Consensus 998 ~ti~~nl~~~------~~~~~~~----~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p-~i 1066 (1293)
-||||-|.+- .+.++++ +.++++..++.++- |..|+..|..||..||+||.||--|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 4999988532 1223322 44455555444432 45578888999999999999999999999 88
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcch--hhccCEEEEEe-CCeEeeecChhh
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT--IIDCDRILLLD-SGRVLEYDTPEE 1129 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~--~~~~d~i~vl~-~G~i~~~g~~~e 1129 (1293)
|+|||||||||.++...|.+.++++. .|+||+.+=|.++. .+..|+++.|+ .|+.+..|+..+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 89999999999999999999999976 58999999999986 46699999998 789999988654
No 120
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-43 Score=398.40 Aligned_cols=217 Identities=26% Similarity=0.417 Sum_probs=192.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++||+++|++. .+++|+||+|+.||.++|+|||||||||||++|+|+.+|++|+|.|||.++++++|.+ +.||
T Consensus 3 ~i~l~~v~K~yg~~--~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSF--EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 48999999999864 2999999999999999999999999999999999999999999999999999998865 7899
Q ss_pred EEccccccccc-cHhhhcCCCCCC-------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~~-------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
+|+|+..||.. ||++|+.+.-+. .+.++.++++..++.+++++.| .+||||||||+|||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHHH
Confidence 99999999977 999999764321 2455777777777766666654 6799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCC
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1136 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 1136 (1293)
|+++|+++|||||.|+||+..+..+...|+++.+ +.|+|.||||..++.. +|||.||++|+|.+.|+|.|+..++.+
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999999999988654 6899999999999877 999999999999999999999977654
Q ss_pred hHH
Q 000774 1137 SFS 1139 (1293)
Q Consensus 1137 ~~~ 1139 (1293)
.|-
T Consensus 228 ~fV 230 (338)
T COG3839 228 LFV 230 (338)
T ss_pred hhh
Confidence 443
No 121
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-43 Score=387.58 Aligned_cols=225 Identities=38% Similarity=0.648 Sum_probs=205.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++...++++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 47899999997543369999999999999999999999999999999999999999999999999887777788889999
Q ss_pred EccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000774 989 IPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1067 (1293)
Q Consensus 989 v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iL 1067 (1293)
+||++.+|..|+++|+.+... ....++.+.++..++.++++.+|.++++..+..+.+||||||||++|||||+.+|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998999999986533 2445566777778889999999999998888889999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1068 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1068 lLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 999999999999999999999998778999999999999988999999999999999999998754
No 122
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-42 Score=386.18 Aligned_cols=225 Identities=43% Similarity=0.700 Sum_probs=206.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 2 ~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (229)
T cd03254 2 EIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIG 80 (229)
T ss_pred eEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEE
Confidence 58999999999642 35999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 988 IIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
|+||++.+|..|+++|+.++.. ....++.++++..++.++++++|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~l 160 (229)
T cd03254 81 VVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKI 160 (229)
T ss_pred EecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998899999976533 345667778888899999999999999999888999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+..||++++|++|++++.|+++++.++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 161 LILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 9999999999999999999999998678999999999999878999999999999999998888754
No 123
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-43 Score=368.06 Aligned_cols=223 Identities=30% Similarity=0.462 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh-HHHhh
Q 000774 908 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL-MDLRK 984 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~-~~~r~ 984 (1293)
.++++|+++.|+.+. .++|+||||+|.+||++||+|+||||||||.++|+|+.+|++|+|.++|.++....+ ...++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 389999999997642 149999999999999999999999999999999999999999999999987765432 35677
Q ss_pred hceEEcccccc-cc--ccHhhhcC-CCCC----CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 000774 985 ILGIIPQSPVL-FS--GTVRFNLD-PFSE----HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1056 (1293)
Q Consensus 985 ~i~~v~Q~~~l-f~--~ti~~nl~-~~~~----~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~l 1056 (1293)
.|.+|+|||.- ++ .||++-|. +... ....+++++++.+++.+ ....+.+..|||||+||+||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~----------~~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPP----------SFLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCH----------HHHhcCchhcChhHHHHHHH
Confidence 79999999962 32 27777663 2221 12345777777777643 22344556899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1057 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1057 Arall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
||||.-+|++||||||||+||+-....|++.|.+..+ +-|.|+||||+..+.. ||||+||++|+++|.+..+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999999999998765 4699999999999998 999999999999999999999876
Q ss_pred CCChHHH
Q 000774 1134 EGSSFSK 1140 (1293)
Q Consensus 1134 ~~~~~~~ 1140 (1293)
....|.+
T Consensus 233 ~~h~ytr 239 (252)
T COG1124 233 PSHPYTR 239 (252)
T ss_pred CccHHHH
Confidence 4444543
No 124
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.3e-42 Score=402.12 Aligned_cols=219 Identities=27% Similarity=0.437 Sum_probs=185.9
Q ss_pred EEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---Hh
Q 000774 909 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~r 983 (1293)
|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++... .|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 236999999999999999999999999999999999999999999999999998877654 47
Q ss_pred hhceEEcccccccc-ccHhhhcCCCC---CCCHH----HHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 984 KILGIIPQSPVLFS-GTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~-~ti~~nl~~~~---~~~~~----~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
++|||+||++.+|. .|+++|+.+.. ..+.. ++.++++.+ |+....+..+.+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~v-----------gL~~~~~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALV-----------GLGDKHDSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHHHH
Confidence 78999999999996 59999996421 12222 233334443 4444445566789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|++||||||||+||+.+.+.+++.|+++.+ +.|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999754 7899999999999977 99999999999999999999986
Q ss_pred cCCChH
Q 000774 1133 NEGSSF 1138 (1293)
Q Consensus 1133 ~~~~~~ 1138 (1293)
.+...+
T Consensus 231 ~p~~~~ 236 (343)
T TIGR02314 231 HPKTPL 236 (343)
T ss_pred CCCcHH
Confidence 544333
No 125
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.5e-43 Score=352.62 Aligned_cols=206 Identities=28% Similarity=0.429 Sum_probs=184.6
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---Hhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~r~~ 985 (1293)
|+|+||+++|+.. +++|+||||+|++||.+-|+||||||||||+|+|++..+|++|+|.++|.|+.++..++ +|++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999876 67999999999999999999999999999999999999999999999999998877554 7999
Q ss_pred ceEEccccccccc-cHhhhcCCCC-------CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFS-------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~-------~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
||+|+||.-|... ||.||+.+-- ....+++.++|+.+|+.+-...+| .+||||||||++||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHHH
Confidence 9999999988765 9999986421 112456788888888888777776 47999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecC
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 1126 (1293)
||++.+|++||-||||-+|||++...|++.+.+.. .|.||++.|||.+.+.. --|++.+++|+++....
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999999865 48999999999999988 68999999999987654
No 126
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-43 Score=377.70 Aligned_cols=206 Identities=27% Similarity=0.434 Sum_probs=179.1
Q ss_pred cEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 284 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
.|++++|++.|+... ...+|+||||+|++||+.||+|+||||||||++++.++..|++|....
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 389999999997521 246899999999999999999999999999999999999999995432
Q ss_pred ecCcEEEEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 347 IRGTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 347 ~~~~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
.|++||+++|++.|+ +.||++||+|.-. .+ .+++.+.++.++|.+..+..| .+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhH
Confidence 356799999999998 5899999998632 22 245667788888888777776 5999999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
|+|||||+.+|+||+.|||||+|||++.+.|.+.+.+.. .-|-|+++|||.|+.++. |||+.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 999999999999999999999999999999998665543 348999999999999986 899999999999999999999
Q ss_pred hhcc
Q 000774 497 SNNG 500 (1293)
Q Consensus 497 ~~~~ 500 (1293)
..++
T Consensus 230 F~~P 233 (339)
T COG1135 230 FANP 233 (339)
T ss_pred hcCc
Confidence 8764
No 127
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-43 Score=396.89 Aligned_cols=217 Identities=28% Similarity=0.436 Sum_probs=192.0
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++||+++|++ ..+++|+||+|++||.++++|||||||||+|++|+|+..|++|+|.++|+|+..++++ ++.||
T Consensus 5 ~l~i~~v~k~yg~--~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ig 80 (352)
T COG3842 5 ALEIRNVSKSFGD--FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPIG 80 (352)
T ss_pred eEEEEeeeeecCC--eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcccc
Confidence 4999999999984 3799999999999999999999999999999999999999999999999999998875 57899
Q ss_pred EEccccccccc-cHhhhcCCCCC----CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE----HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~----~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
+|+|+..||.. ||++|+.|.-. ..+ +++.++++.+++.++..+.| .+||||||||+||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHHH
Confidence 99999999987 99999976432 222 35677777777777665544 679999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCC
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 1135 (1293)
||..+|++||||||.|+||.+-+..++.-|++..+ |.|.|+||||-++... +|||+||++|+|...|+|+|+..++.
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~ 229 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPA 229 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcc
Confidence 99999999999999999999999999998888653 7999999999999766 99999999999999999999997765
Q ss_pred ChHH
Q 000774 1136 SSFS 1139 (1293)
Q Consensus 1136 ~~~~ 1139 (1293)
..|-
T Consensus 230 ~~fV 233 (352)
T COG3842 230 TRFV 233 (352)
T ss_pred hHHH
Confidence 4443
No 128
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-43 Score=379.66 Aligned_cols=214 Identities=29% Similarity=0.496 Sum_probs=190.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecC-CCChHHHhhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA-KFGLMDLRKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~-~~~~~~~r~~i 986 (1293)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.++|.++. ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 38999999999876 57999999999999999999999999999999999999999999999999988 47788999999
Q ss_pred eEEcccc--ccccccHhhhcCCCCC---CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 987 GIIPQSP--VLFSGTVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 987 ~~v~Q~~--~lf~~ti~~nl~~~~~---~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
|||+|+| .+|..||.+.+.+... ... +++.++++.+++.++.+ ....+||||||||++||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~-----------r~p~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLD-----------RPPFNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhcc-----------CCccccCCcceeeHHhh
Confidence 9999999 6899999999876542 233 33556666666655533 44568999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
.+|..+|++|||||||++||+...+.+.+.++++.. ++|+|++|||++.+.. |||+++|++|+++.+|+|+++.++
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999999999864 4799999999999988 999999999999999999998864
No 129
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-42 Score=381.93 Aligned_cols=224 Identities=43% Similarity=0.717 Sum_probs=205.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ..+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999999643 359999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EccccccccccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000774 989 IPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1067 (1293)
Q Consensus 989 v~Q~~~lf~~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iL 1067 (1293)
+||++.+|+.|+++|+.+.. ...+.++.+.++.+++.+.+..+|.++++.+...+.+||||||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997543 23455677778888899999999999999999889999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1068 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1068 lLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
||||||++||+.+.+.+.+.|.+..++.|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~ 225 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK 225 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 999999999999999999999987668899999999999988999999999999999999988753
No 130
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-42 Score=401.00 Aligned_cols=265 Identities=20% Similarity=0.285 Sum_probs=209.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCC
Q 000774 220 GDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAE 299 (1293)
Q Consensus 220 ~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~ 299 (1293)
+.+++..+|+.++++..+..|+..++..... ..|+..++..++..........+....|+++|++++|+. ..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~-~~ 94 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMN-RT 94 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccCCCCcCceEEEEeeEEEecC-CC
Confidence 4567888888888888777776665544322 568888876543211000111123357999999999963 34
Q ss_pred CCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCCce--------------eecCcEEEEcCCccc
Q 000774 300 RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASA--------------VIRGTVAYVPQVSWI 360 (1293)
Q Consensus 300 ~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~-----~~~g~~~--------------~~~~~i~~v~Q~~~l 360 (1293)
+++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|... .+++.++||||+|++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 679999999999999999999999999999999999986 4577421 235679999999999
Q ss_pred cCccHHHHHccCCC---CCHH-----HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEE
Q 000774 361 FNATVRDNILFGSA---FEPA-----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 432 (1293)
Q Consensus 361 ~~~Tv~eni~~g~~---~~~~-----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~il 432 (1293)
|++||+|||.|+.. .+++ .+.++++.+++.+++ .+.+++++.+||||||||++|||||+++|+||
T Consensus 175 ~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p~Il 247 (329)
T PRK14257 175 FEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEPEVL 247 (329)
T ss_pred CCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999998642 2222 245567777764433 35688999999999999999999999999999
Q ss_pred EEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhcc
Q 000774 433 IFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 433 lLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
||||||++||+.+.+++.+. ++...+++|+|+|||+++++.. ||||++|++|++++.|+++++.+..
T Consensus 248 LLDEPts~LD~~~~~~i~~~-i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~ 315 (329)
T PRK14257 248 LMDEPTSALDPIATAKIEEL-ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHP 315 (329)
T ss_pred EEeCCcccCCHHHHHHHHHH-HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCC
Confidence 99999999999999998764 4555567999999999999887 9999999999999999999987653
No 131
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4e-42 Score=387.79 Aligned_cols=225 Identities=22% Similarity=0.366 Sum_probs=201.0
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.|+++|++++|+. +++++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|.... +++.|
T Consensus 2 ~i~~~nls~~~~~-~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTE-GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCC-CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 4899999999963 24679999999999999999999999999999999999997 6673211 23469
Q ss_pred EEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 352 AYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 352 ~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
+|+||++.+|++||++|+......++++++++++.+++.+.++.+|+++++.++++|.+||||||||++|||||+++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999964334567788899999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHHHHhc
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAG 511 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 511 (1293)
+||||||++||+.+.+.+.+.+.. ..+++|+|+||||++++..||||++|++|++++.|+++++.++.+.|++++...+
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhcc
Confidence 999999999999999988876554 4468999999999999989999999999999999999999998888888877654
No 132
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.6e-42 Score=378.45 Aligned_cols=218 Identities=37% Similarity=0.596 Sum_probs=197.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|+++.|+....++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++...++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 48999999999653246999999999999999999999999999999999999999999999999988777777788999
Q ss_pred EEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 988 IIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
|+||++.+|..|+.+|+.+... ....++.+.++..++.+.+..+|.++++.+.+...+||||||||++||||++.+|++
T Consensus 82 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~l 161 (220)
T cd03245 82 YVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPI 161 (220)
T ss_pred EeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999988899999975432 244567778888899999999999999988888889999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeec
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g 1125 (1293)
|||||||++||+.+.+.+++.|++...++|||++||+++.+..||++++|++|++++.|
T Consensus 162 lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 162 LLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999999976668999999999988669999999999998754
No 133
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-42 Score=360.31 Aligned_cols=212 Identities=28% Similarity=0.414 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC---hHHHhh
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---LMDLRK 984 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~---~~~~r~ 984 (1293)
.|+++||+++|+++ ..+|+||||+|++||.|||+||||||||||+++|.|+.+|++|+|.++|.++...+ .+++|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 38999999999744 47999999999999999999999999999999999999999999999999988877 556688
Q ss_pred hceEEccccccccc-cHhhhcCCC------------CCCCHHH---HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCCh
Q 000774 985 ILGIIPQSPVLFSG-TVRFNLDPF------------SEHSDAD---LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 1048 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~-ti~~nl~~~------------~~~~~~~---~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSg 1048 (1293)
+|||++|++.|-+. |+.+|+..+ +-.+.++ ..++|+++++ ......+.++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi-----------~~~A~qra~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGI-----------LDKAYQRASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCc-----------HHHHHHHhccCCc
Confidence 89999999999866 999997421 2233333 3444444444 3444456678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1049 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1049 Gqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
||+||++|||||+.+|+|+|-|||+++|||.+.+.+++.|++.. .|.|+|+.-|+++.+.+ ||||+-|++|+|+.+|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999865 47999999999999877 9999999999999999
Q ss_pred Chhhhh
Q 000774 1126 TPEELL 1131 (1293)
Q Consensus 1126 ~~~el~ 1131 (1293)
+++|+-
T Consensus 231 ~~~el~ 236 (258)
T COG3638 231 PASELT 236 (258)
T ss_pred Chhhhh
Confidence 999964
No 134
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-43 Score=357.00 Aligned_cols=223 Identities=28% Similarity=0.451 Sum_probs=191.6
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i 986 (1293)
.+..+|+.++|+.. +++++|||+|++||+||++|||||||||.+.++.|+.+|++|+|.+||.|++.++.... |..|
T Consensus 4 ~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGi 81 (243)
T COG1137 4 TLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGI 81 (243)
T ss_pred EEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCc
Confidence 48899999999765 79999999999999999999999999999999999999999999999999999998764 4459
Q ss_pred eEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
||+||++.+|.+ ||++||...-+..+.+.+...++..+.+.++.+ .+.......+.+||||||+|+.|||||..+|+
T Consensus 82 gYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 82 GYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 999999999977 999999643332222223233344455555553 56666777889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcch-hhccCEEEEEeCCeEeeecChhhhhhcC
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-IIDCDRILLLDSGRVLEYDTPEELLSNE 1134 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~-~~~~d~i~vl~~G~i~~~g~~~el~~~~ 1134 (1293)
.++||||++|+||-+...|++.++.+. +|-.|+++-|+..+ +.-|||.+++.+|+|...|+|+|+.+++
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 999999999999999999999998876 47889999999766 5559999999999999999999999754
No 135
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.9e-42 Score=381.64 Aligned_cols=225 Identities=41% Similarity=0.660 Sum_probs=203.0
Q ss_pred EEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 909 IKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
++++|++++|++. ..++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+....++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999642 236999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 988 IIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
|+||++.+|+.|+++|+.+... ...+++.+.++..++.+++..+|.++++.......+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998899999975432 234556667777788899999999999888888899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999987667899999999999888999999999999999999888753
No 136
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.4e-42 Score=366.15 Aligned_cols=203 Identities=30% Similarity=0.423 Sum_probs=170.9
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---H-
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L- 982 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~- 982 (1293)
++++||++.|..+. ..+|+++||+|++||.++|+||||||||||+++|.|+.+|++|.|.++|.|+..++... +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999996432 36899999999999999999999999999999999999999999999999999888543 3
Q ss_pred hhhceEEccccccccc-cHhhhcCC---CCCCCH----HHHHHHHHHhhHHHHHHHccCCcchhhh-cCCCCCChhHHHH
Q 000774 983 RKILGIIPQSPVLFSG-TVRFNLDP---FSEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVS-EAGENFSVGQRQL 1053 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf~~-ti~~nl~~---~~~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~-~~~~~LSgGqkqr 1053 (1293)
|++||||+|+..|.+. |++||+.. +..... +...+.++.. |+..... ..+.+||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~l-----------gl~~~~~~~~p~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVL-----------GLEDRLLKKKPSELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhc-----------CChhhhccCCchhcCHHHHHH
Confidence 4569999999999876 99999863 222221 1222223332 4443333 5567899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEe
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVL 1122 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~ 1122 (1293)
+||||||+.+|+|++.||||.+||.++.+.+++.+++..+ ++|+|+||||......|||++.|.+|++.
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 9999999999999999999999999999999999999753 68999999999999999999999999953
No 137
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=368.99 Aligned_cols=197 Identities=26% Similarity=0.366 Sum_probs=168.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.+++++|+++|+. ..+|+|+||+|++||.|+|+||||||||||+|+|+|+.+|++|+|.++|.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 3899999999986 3799999999999999999999999999999999999999999999999988443 35799
Q ss_pred EEccccccccc-cHhhhcCCCCCC-------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~~-------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
||+|++.||.- ||++|+.+.-+. ..+.+.+.++.+|+.++- +..+.+||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~-----------~~~P~qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFE-----------DKYPHQLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchh-----------hcCccccChHHHHHHHHHHH
Confidence 99999999986 999999753221 123355555555555544 44557899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeC--CeEe
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS--GRVL 1122 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~--G~i~ 1122 (1293)
|+.+|+||+||||+++||+.|+..+++.|.++. .++||++||||.+++-. +|||+||.+ |+|.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999999999998854 35999999999999766 999999998 5553
No 138
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-43 Score=353.29 Aligned_cols=216 Identities=26% Similarity=0.456 Sum_probs=187.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
+++.+++++|++. ..+++||||+++.||++||+|||||||||++++|.+++.|++|.|.+||.|..+ .|...|++||+
T Consensus 2 l~v~~l~K~y~~~-v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGSK-VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccCH-HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcce
Confidence 6889999999863 348999999999999999999999999999999999999999999999999987 56789999999
Q ss_pred Eccccccccc-cHhhhcCCCCCC---CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSEH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~~---~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
++-+..++.. |+||||.+|+.. .+.++. +.+.+...+ .++....+.+..+||-|+|||++|||||+++|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~--l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKR--LQLLEYLDRRVGEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHH--hChHHHHHHHHhhhchhhHHHHHHHHHHhcCC
Confidence 9988788865 999999876532 222221 223333333 35566666677789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
++++|||||||||..+.+.+++.+++... +++||+.||.|++++. ||||+++++|+++..|+++++.++
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999999999999999999999765 8999999999999997 999999999999999999999764
No 139
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.6e-42 Score=372.06 Aligned_cols=207 Identities=61% Similarity=0.992 Sum_probs=183.1
Q ss_pred CCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH
Q 000774 903 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 982 (1293)
Q Consensus 903 ~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~ 982 (1293)
||..+.++++|++++|+....++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+....
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 56677899999999997533369999999999999999999999999999999999999999999999999988887788
Q ss_pred hhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 983 RKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+.|+|+||++.+|++|+++|+.++....++++.++++ +++.+..|||||+||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 88999999999999999999997654333333333222 234567899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecCh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTP 1127 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~ 1127 (1293)
+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999997678999999999999877999999999999988864
No 140
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-42 Score=380.99 Aligned_cols=216 Identities=29% Similarity=0.457 Sum_probs=181.9
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh---HHHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~---~~~r~~ 985 (1293)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++ ..+|+.
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGGR--TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 4689999999643 69999999999999999999999999999999999999999999999999887664 456788
Q ss_pred ceEEccccccccc-cHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
|+|+||++.+|.. |+++|+.+.. ..+..+..+ .+.+.++.+ |+.........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~al 151 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARAL 151 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 9999999999876 9999986431 112222111 122333332 444445556678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++...
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 152 ALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 999999999999999999999999999998753 7899999999999876 999999999999999999998753
No 141
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2e-41 Score=377.78 Aligned_cols=183 Identities=24% Similarity=0.359 Sum_probs=140.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++..+++++|++- .|+==.=+|..||++|++||||-||||++++|+|.++|++|. ..+ -+|+|
T Consensus 343 v~y~~~~k~~g~F---~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSy 405 (591)
T COG1245 343 VEYPDLKKTYGDF---KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSY 405 (591)
T ss_pred eecchheeecCce---EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEee
Confidence 4555566666421 222223345678999999999999999999999999999998 222 25888
Q ss_pred Eccccc-cccccHhhhcCCCCC--CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 989 IPQSPV-LFSGTVRFNLDPFSE--HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 989 v~Q~~~-lf~~ti~~nl~~~~~--~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
=||--. -|++||++-|.-... ..+. .....+. .|..++.........|||||.|||++|-||.++++
T Consensus 406 KPQyI~~~~~gtV~~~l~~~~~~~~~~s---------~~~~ei~-~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reAD 475 (591)
T COG1245 406 KPQYISPDYDGTVEDLLRSAIRSAFGSS---------YFKTEIV-KPLNLEDLLERPVDELSGGELQRVAIAAALSREAD 475 (591)
T ss_pred cceeecCCCCCcHHHHHHHhhhhhcccc---------hhHHhhc-CccchHHHHhcccccCCchhHHHHHHHHHhccccC
Confidence 888653 478899986632110 1111 1111111 26777888888888999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeC
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS 1118 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~ 1118 (1293)
+.|||||++.||.+.+-.+-++|++.. .++|.++|-||+..+.. +||++|++.
T Consensus 476 lYllDEPSA~LDvEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 476 LYLLDEPSAYLDVEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred EEEecCchhhccHHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 999999999999999999999999865 46899999999999988 999999963
No 142
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=391.52 Aligned_cols=220 Identities=20% Similarity=0.375 Sum_probs=186.3
Q ss_pred ccEEEEEEEEEecCC---CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC------
Q 000774 907 GSIKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF------ 977 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~---~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~------ 977 (1293)
..|+++|++|+|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 358999999999642 13599999999999999999999999999999999999999999999999998653
Q ss_pred ----------ChHHHhhhceEEcccc--ccccccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhc
Q 000774 978 ----------GLMDLRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD-AQVSE 1041 (1293)
Q Consensus 978 ----------~~~~~r~~i~~v~Q~~--~lf~~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~ 1041 (1293)
....+|++||||||+| .+|+.|+++|+.+... .+.++. .+ ...++++.+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~---~~--~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEA---KK--LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHH---HH--HHHHHHHHc--CCChhHhcC
Confidence 3456788999999998 6888899999965321 122222 11 233455554 564 45677
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCC
Q 000774 1042 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSG 1119 (1293)
Q Consensus 1042 ~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G 1119 (1293)
.+.+||||||||++|||||+.+|+||||||||++||+.+++.+.+.|++.. +++|||+||||++++.. ||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998864 47899999999998755 9999999999
Q ss_pred eEeeecChhhhhhc
Q 000774 1120 RVLEYDTPEELLSN 1133 (1293)
Q Consensus 1120 ~i~~~g~~~el~~~ 1133 (1293)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998753
No 143
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.5e-42 Score=393.54 Aligned_cols=216 Identities=28% Similarity=0.445 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++||+++|++. .+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++||
T Consensus 7 ~i~i~~l~k~~~~~--~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ig 83 (306)
T PRK13537 7 PIDFRNVEKRYGDK--LVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRVG 83 (306)
T ss_pred eEEEEeEEEEECCe--EEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcEE
Confidence 59999999999753 6999999999999999999999999999999999999999999999999997644 45788999
Q ss_pred EEcccccccc-ccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~-~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
|+||++.+|. .|++||+.++.. ....+..+ .+.+.++. .++.........+||||||||++|||||+.+
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~ 156 (306)
T PRK13537 84 VVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARA-----LVPPLLEF--AKLENKADAKVGELSGGMKRRLTLARALVND 156 (306)
T ss_pred EEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHH--cCCchHhcCchhhCCHHHHHHHHHHHHHhCC
Confidence 9999999886 599999975332 12222111 12233333 2444445556678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|++|||||||+|||+.+++.+++.|+++.. ++|||++||++++++. ||||++|++|++++.|+++++.+.
T Consensus 157 P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 157 PDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999999999754 7899999999999977 999999999999999999999754
No 144
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-42 Score=370.63 Aligned_cols=215 Identities=27% Similarity=0.427 Sum_probs=184.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCe---ecCCCChHHHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF---DIAKFGLMDLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~---~i~~~~~~~~r~~ 985 (1293)
|+++|+++.|+.. ++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.++|. |.++.+ .-.++
T Consensus 3 i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~R~ 78 (345)
T COG1118 3 IRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRDRK 78 (345)
T ss_pred eeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhhcc
Confidence 7889999999754 6999999999999999999999999999999999999999999999999 666533 34467
Q ss_pred ceEEccccccccc-cHhhhcCCCCCC---------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFSEH---------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~~~---------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
||+|+|+..+|.. ||.+|+.|..+. .+.++.+.|+.+++..+-+ ..+.+||||||||+|
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHHHHHHH
Confidence 9999999999976 999999875421 1233444555555544433 445789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||..+|++||||||.++||..-++.+.+.|++... +.|+++||||.+++.. ||||++|++|+|...|+|+|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 99999999999999999999999999999999998653 7999999999999876 99999999999999999999987
Q ss_pred cCCChH
Q 000774 1133 NEGSSF 1138 (1293)
Q Consensus 1133 ~~~~~~ 1138 (1293)
.+.+.|
T Consensus 228 ~P~s~f 233 (345)
T COG1118 228 HPASRF 233 (345)
T ss_pred CCCccc
Confidence 665544
No 145
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.3e-42 Score=378.64 Aligned_cols=209 Identities=32% Similarity=0.512 Sum_probs=177.6
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCC-----CCCcceEEECCeecCCCC--hHH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV-----ELERGRILIDGFDIAKFG--LMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~-----~p~~G~I~i~g~~i~~~~--~~~ 981 (1293)
|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|.++...+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 4789999999753 6999999999999999999999999999999999999 999999999999987766 556
Q ss_pred HhhhceEEccccccccccHhhhcCCCCC---C-C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcC--CCCCChhHH
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFSE---H-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEA--GENFSVGQR 1051 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~-~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~--~~~LSgGqk 1051 (1293)
+|++++|+||++.+|..|+++|+.+... . . ++++.++++.. |++...... +.+||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~~LSgG~~ 147 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKA-----------ALWDEVKDRLHALGLSGGQQ 147 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHc-----------CCChHHhccCCcccCCHHHH
Confidence 7888999999999887799999964211 1 1 11233333333 343333333 478999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1052 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1052 qrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
||++|||||+.+|++|||||||++||+.+++.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999999999997655899999999999876 999999999999999988764
No 146
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=9.4e-42 Score=338.97 Aligned_cols=209 Identities=29% Similarity=0.424 Sum_probs=186.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
+.+++|.++|+.. =-.++++|++||++||+||||||||||+++|+|+..|.+|+|.|+|+|....+|. ++-+++
T Consensus 2 l~L~~V~~~y~~~----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHL----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCcc----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 5688999999643 2357899999999999999999999999999999999999999999999887764 456999
Q ss_pred Eccccccccc-cHhhhcCCCC----CC---CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPFS----EH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~----~~---~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
++|+..||.. ||++|+.+.- +. ..+.+..++.++|+.++..++| .+||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHH
Confidence 9999999987 9999996432 22 3456888999999999999988 36999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcC
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1134 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 1134 (1293)
+++-+||+||||+|+|||.-+.++...+.+.. ++.|+++|||.++.+.. +||++++++|||.+.|..+++.+..
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 99999999999999999999999999998865 46899999999999887 9999999999999999999998643
No 147
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=396.62 Aligned_cols=214 Identities=21% Similarity=0.376 Sum_probs=183.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|+++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++...++. ++.|||
T Consensus 4 l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~ 80 (356)
T PRK11650 4 LKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIAM 80 (356)
T ss_pred EEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEE
Confidence 8999999999422 3699999999999999999999999999999999999999999999999999887764 478999
Q ss_pred Eccccccccc-cHhhhcCCCCC---CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~---~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
|||++.+|.. ||++|+.+... .+. +++.++++..++ +...+..+.+||||||||++|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILEL-----------EPLLDRKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCC-----------hhHhhCChhhCCHHHHHHHHHHHHH
Confidence 9999999965 99999975321 122 223444444444 4444555678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCC
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1136 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 1136 (1293)
+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++.+++..
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 999999999999999999999999999998654 7899999999998866 999999999999999999999876543
No 148
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-39 Score=352.20 Aligned_cols=463 Identities=18% Similarity=0.233 Sum_probs=321.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccchhHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHH
Q 000774 635 FGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLS 714 (1293)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~G~il~rls~Di~~id~~~~~~~~~~~~~~~~~~~ 714 (1293)
..-.+.+.+........+.....++|.++.++++..|+.-+++.+.++++.++++|+..|. +-...+..+.+..+..++
T Consensus 59 llf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~il~l~ 137 (546)
T COG4615 59 LLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPELVQAIILTLG 137 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHHHHHHHHHHHH
Confidence 3334455566667777888889999999999999999999999999999999999999997 333345556666667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHccHHHHHHhcHHH--HHHHHHHHH
Q 000774 715 TFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD--RMADINGKS 792 (1293)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~--~~~~~~~~~ 792 (1293)
+....++.+|.++.+.+..+++.++...+.+....+.-+...+....+.++++..+.|.+..+..+... .+.+.+...
T Consensus 138 s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~ 217 (546)
T COG4615 138 SAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPD 217 (546)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcc
Confidence 777788888876655444444433333332222222223333445667889999999999988764432 222222211
Q ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 793 MD----KNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLAS 868 (1293)
Q Consensus 793 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~ 868 (1293)
.. ..............|..+.+-.+.++.+|+..... ...+ .....+....+.+-.++.+++....
T Consensus 218 a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~----w~st------~~a~tivlvlLflr~pL~s~vgilP 287 (546)
T COG4615 218 AQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG----WAST------NVAATIVLVLLFLRTPLLSAVGILP 287 (546)
T ss_pred hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cchh------hHHHHHHHHHHHHhhHHHHHHhhhh
Confidence 11 11112222223334444443333333332222111 1111 0111122223344556777777778
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCC
Q 000774 869 LAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAG 948 (1293)
Q Consensus 869 ~~~~~~~a~~Rl~~~~~~~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsG 948 (1293)
.+..+.++.+++.++-..|..... ....+.+.| ..|+++||.|.|.+.. --+..||++|++||.|-|+|.||||
T Consensus 288 ~l~~AqvA~~kiakle~~~~~a~~--~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG~NGsG 361 (546)
T COG4615 288 TLLTAQVAFNKIAKLELAPYKADF--PRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIGGNGSG 361 (546)
T ss_pred HHHHHHHHHHHHHHhhcCCccccC--CCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEEECCCCCc
Confidence 888888999999887653322111 111222334 3599999999997653 3588999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHH
Q 000774 949 KSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAI 1028 (1293)
Q Consensus 949 KSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i 1028 (1293)
|||++++|+|+|+|++|+|++||.+++..++++.|+.++-|+-|.+||+.++- +-+..+.+.+..-+++..+....
T Consensus 362 KST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~----~e~~as~q~i~~~LqrLel~~kt 437 (546)
T COG4615 362 KSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG----PEGKASPQLIEKWLQRLELAHKT 437 (546)
T ss_pred HHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC----CccCCChHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999987552 22224556666656554443322
Q ss_pred HHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcch
Q 000774 1029 RRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNT 1106 (1293)
Q Consensus 1029 ~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~ 1106 (1293)
.-....+ ....||-|||.||++--|++.+-+|+++||=-+.-||.-++.+++.+--.. .|+||+.||||-..
T Consensus 438 sl~d~~f------s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~Y 511 (546)
T COG4615 438 SLNDGRF------SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHY 511 (546)
T ss_pred cccCCcc------cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchh
Confidence 2111111 123699999999999999999999999999999999999999988875533 58999999999999
Q ss_pred hhccCEEEEEeCCeEeee
Q 000774 1107 IIDCDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1107 ~~~~d~i~vl~~G~i~~~ 1124 (1293)
...|||++-|++|+++|.
T Consensus 512 F~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 512 FIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhHHHHHHHhcCceeec
Confidence 999999999999999886
No 149
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=375.34 Aligned_cols=217 Identities=28% Similarity=0.462 Sum_probs=185.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++..+|+.++
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFGK--EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 38999999999643 6999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 988 IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
|+||++.+|..|+++|+.+........ ...+.++++.+ |++ .........||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 152 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEK------NVDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNPEV 152 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcH------HHHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999889999987432111110 01122333332 443 234566778999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcC
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1134 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 1134 (1293)
|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (241)
T PRK14250 153 LLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNP 223 (241)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCC
Confidence 999999999999999999999998653 7899999999999876 9999999999999999999987543
No 150
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=394.85 Aligned_cols=216 Identities=25% Similarity=0.414 Sum_probs=185.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...++ .+++||
T Consensus 6 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~ig 81 (351)
T PRK11432 6 FVVLKNITKRFGSN--TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDIC 81 (351)
T ss_pred EEEEEeEEEEECCe--EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCEE
Confidence 59999999999753 68999999999999999999999999999999999999999999999999987664 357899
Q ss_pred EEccccccccc-cHhhhcCCCCC---CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~---~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
||||++.+|.. |+++|+.+... ... +++.++++..++ ....+..+..||||||||++||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl-----------~~~~~r~~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDL-----------AGFEDRYVDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCC-----------chhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 222 233444444444 334455567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCC
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1136 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 1136 (1293)
|+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+||||++++.. ||||++|++|++++.|+|+++.+++..
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~ 230 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPAS 230 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCc
Confidence 9999999999999999999999999999998754 7899999999999866 999999999999999999999876544
Q ss_pred hH
Q 000774 1137 SF 1138 (1293)
Q Consensus 1137 ~~ 1138 (1293)
.|
T Consensus 231 ~~ 232 (351)
T PRK11432 231 RF 232 (351)
T ss_pred hH
Confidence 33
No 151
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-42 Score=357.85 Aligned_cols=203 Identities=27% Similarity=0.426 Sum_probs=176.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCce------------eecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASA------------VIRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~------------~~~~~i 351 (1293)
.|+++|||++|. ++.+++|+||+|++||+++++|||||||||+|++|.++++|++|... .+|.+|
T Consensus 1 MI~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~I 77 (309)
T COG1125 1 MIEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKI 77 (309)
T ss_pred CceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhh
Confidence 379999999996 57899999999999999999999999999999999999999999432 256689
Q ss_pred EEEcCCcccc-CccHHHHHccCCC---CCH----HHHHHHHHHcCChh--HHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 352 AYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQH--DLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 352 ~~v~Q~~~l~-~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~--~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
|||-|..-|| +.||.|||.+-.. .+. ++.++.++..+|.. +.+..| .+|||||+|||.+
T Consensus 78 GYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv 146 (309)
T COG1125 78 GYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGV 146 (309)
T ss_pred hhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHH
Confidence 9999999998 7899999986532 333 45566777888863 566666 5899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchh-hhCCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||+.+|+|+++||||++|||.++..+-+.+.+..+ -|+|+|+||||+++. +.+|||.+|++|+++..++|++++.+
T Consensus 147 ~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 147 ARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred HHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999887766433 389999999999875 56899999999999999999999987
Q ss_pred c
Q 000774 500 G 500 (1293)
Q Consensus 500 ~ 500 (1293)
.
T Consensus 227 P 227 (309)
T COG1125 227 P 227 (309)
T ss_pred c
Confidence 4
No 152
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-41 Score=386.86 Aligned_cols=213 Identities=32% Similarity=0.571 Sum_probs=185.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++||+++|+.+ ..+|+||||+|++||++|++||||||||||+++|+|+++|++|+|.++|.+...- ....|++||
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 37899999999831 2699999999999999999999999999999999999999999999999998765 778999999
Q ss_pred EEccccccccc-cHhhhcCCCCCC-------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~~-------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
|+||+|.++.. |++|||.++... .++.+.+.++..++. .........||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLE-----------DKANKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCc-----------hhhCcchhhcCHHHHHHHHHHHH
Confidence 99999998876 999999864321 123455555554443 22244567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-C-cEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-S-CTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~-~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|+.+|++|||||||+||||.+...+++.|+++.. + +||+++||.+++++. ||||++|++|+++..|+++++...
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999875 4 699999999999988 999999999999999999998754
No 153
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=360.70 Aligned_cols=187 Identities=29% Similarity=0.439 Sum_probs=165.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeec--------CcEEEEc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------GTVAYVP 355 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~--------~~i~~v~ 355 (1293)
.+++++++++|+. ..+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|. +.+. ..++||+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~-V~~~g~~v~~p~~~~~~vF 78 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGE-VLLDGRPVTGPGPDIGYVF 78 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCce-EEECCcccCCCCCCEEEEe
Confidence 5889999999973 68999999999999999999999999999999999999999994 3332 3699999
Q ss_pred CCccccC-ccHHHHHccCCCC-------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhc
Q 000774 356 QVSWIFN-ATVRDNILFGSAF-------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 427 (1293)
Q Consensus 356 Q~~~l~~-~Tv~eni~~g~~~-------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~ 427 (1293)
|++.||. .||+||+.|+... ..++..+.++.++|..+-+.+|+ +|||||||||||||||+.
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARALAT 147 (248)
T ss_pred ccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHHHhc
Confidence 9999975 8999999998543 12467788999999999988884 899999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCC
Q 000774 428 NSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEG 485 (1293)
Q Consensus 428 ~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G 485 (1293)
+|++|+||||+++||+.|+..+.+.+.+.+. .++|+++||||.++.- -+|||++|.++
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999988877654 4799999999998864 58999999984
No 154
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=393.50 Aligned_cols=220 Identities=28% Similarity=0.463 Sum_probs=185.7
Q ss_pred EEEEEEEEEecC--CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---Hh
Q 000774 909 IKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~--~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~r 983 (1293)
|+++||+++|+. ...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 1246999999999999999999999999999999999999999999999999998877654 47
Q ss_pred hhceEEcccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 984 KILGIIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
++|||+||++.+|. .|+++|+.+.. ..+..+.. ..+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIK-----ARVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 78999999999886 59999996421 12222111 1223344443 55555666678899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCC
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 1135 (1293)
|+.+|+||||||||++||+.+.+.+++.|+++.+ ++|+|++||+++.+.. ||||++|++|++++.|+++++.....
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 233 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPK 233 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 9999999999999999999999999999998753 7899999999999877 99999999999999999999986543
No 155
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.6e-41 Score=351.71 Aligned_cols=212 Identities=30% Similarity=0.492 Sum_probs=179.7
Q ss_pred CCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 282 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 282 ~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
.+.|++++++++|+ ++.+++||||+|++||+++|+||||||||||+++|.|+++|++|.+..
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 35799999999996 578999999999999999999999999999999999999999995432
Q ss_pred ecCcEEEEcCCcccc-CccHHHHHccCC----CCCHHHH----HHHHHHcCChhH-HhcCCCCCcccccCCCCCCChHHH
Q 000774 347 IRGTVAYVPQVSWIF-NATVRDNILFGS----AFEPARY----EKAIDVTSLQHD-LDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 347 ~~~~i~~v~Q~~~l~-~~Tv~eni~~g~----~~~~~~~----~~~~~~~~l~~~-~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
+++++|+++|+..|| +.||+||+.|.- ..+++.+ ..-++.++|... .+.+| .+||||++
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHH
Confidence 356799999999999 679999999852 2333333 334778899887 77777 48999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc--CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecCh
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL--SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 493 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~--~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 493 (1293)
+|+|||||+..||+++++||||+||||.+...+-+ +++... -|.|+|+||||++.+.. |||++++.+|+|+.+|++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~-LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~ 230 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVIDE-LIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTP 230 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHH-HHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCH
Confidence 99999999999999999999999999999887765 444332 28999999999999875 699999999999999999
Q ss_pred HHHhhc-cHHHHHHHH
Q 000774 494 EDLSNN-GELFQKLME 508 (1293)
Q Consensus 494 ~~l~~~-~~~~~~~~~ 508 (1293)
+++.+. .+..++++.
T Consensus 231 ~el~~sd~P~v~qf~~ 246 (263)
T COG1127 231 EELLASDDPWVRQFFN 246 (263)
T ss_pred HHHHhCCCHHHHHHhc
Confidence 999876 455555543
No 156
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-41 Score=351.99 Aligned_cols=220 Identities=27% Similarity=0.435 Sum_probs=189.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i 986 (1293)
.++++|++..|++. ++|++|||++++||+++|+||||+|||||+++|+|+.+|.+|+|.++|.|++..+++.. |..|
T Consensus 3 mL~v~~l~~~YG~~--~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGKI--QALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccce--eEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 37999999999864 79999999999999999999999999999999999999999999999999999998875 5569
Q ss_pred eEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
+||||...+|.. ||.|||.......+. +......+++..+-+| .|....+..+.+|||||||.|+|||||+.+|+
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~---~~~~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRD---KEAQERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccc---cccccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999976 999999753211111 0001111334445566 46677778889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+|+|||||.||-|.-.+.|.+.|+++.+ +.||++|-++...+.. +||.+||++|+|+..|+.+||.++
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999999874 4699999999999766 999999999999999999999865
No 157
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-41 Score=362.77 Aligned_cols=204 Identities=31% Similarity=0.517 Sum_probs=174.9
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceee---------cCcEEE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------RGTVAY 353 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~---------~~~i~~ 353 (1293)
..|+++|++|+|++ . ++|+||||+|++|++++|+||||||||||+|+|+|+++|.+|.+... +.+|||
T Consensus 3 ~~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 3 PMIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred cEEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 46999999999963 2 69999999999999999999999999999999999999999954432 146999
Q ss_pred EcCCc---cccCccHHHHHccCCCC-----------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 354 VPQVS---WIFNATVRDNILFGSAF-----------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 354 v~Q~~---~l~~~Tv~eni~~g~~~-----------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
|||.. |-|..||+|-+.+|... +.+++.++++.+++.+..+. ...+|||||+|||
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-----------~i~~LSGGQ~QRV 148 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-----------QIGELSGGQKQRV 148 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-----------cccccCcHHHHHH
Confidence 99964 55889999999998421 23778889999998866553 2357999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhh
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
.|||||+++|++|+|||||+++|+.++..+++.+.+...+|+||++||||++.+. .+|+|+.| |+++.+.|++++..+
T Consensus 149 ~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~~ 227 (254)
T COG1121 149 LLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVLT 227 (254)
T ss_pred HHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhccC
Confidence 9999999999999999999999999999999866666666999999999999886 58999999 567889999999876
Q ss_pred ccH
Q 000774 499 NGE 501 (1293)
Q Consensus 499 ~~~ 501 (1293)
...
T Consensus 228 ~~~ 230 (254)
T COG1121 228 EEN 230 (254)
T ss_pred HHH
Confidence 543
No 158
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.6e-41 Score=393.03 Aligned_cols=220 Identities=24% Similarity=0.409 Sum_probs=187.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++...++. ++.||
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGAF--TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCCe--EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 38999999999753 589999999999999999999999999999999999999999999999999877653 67899
Q ss_pred EEccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
||||++.+|.. |+++|+.+... .+..+. ...+.+.++.+ |++...+..+.+||||||||++|||||+.+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~-----~~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~~ 152 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEV-----AERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALATS 152 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 99999975311 111111 12233444443 555666677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChH
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSF 1138 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~ 1138 (1293)
|++|||||||++||+.+++.+.+.|++..+ +.|+|+|||+++++.. ||||++|++|++++.|+|+++.+++...|
T Consensus 153 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 153 PGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 999999999999999999999999998654 7899999999999866 99999999999999999999987654333
No 159
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-41 Score=375.50 Aligned_cols=216 Identities=24% Similarity=0.421 Sum_probs=185.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC---CCcceEEECCeecCCCChHHHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~---p~~G~I~i~g~~i~~~~~~~~r~~ 985 (1293)
++++|+++.|++ +++|+|+||++++||++||+||||||||||+++|+|+++ |++|+|.++|.++...+....|+.
T Consensus 3 ~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 3 AKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred eeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 789999999974 369999999999999999999999999999999999985 689999999999988777788889
Q ss_pred ceEEccccccccccHhhhcCCCCC---C------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 000774 986 LGIIPQSPVLFSGTVRFNLDPFSE---H------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1056 (1293)
Q Consensus 986 i~~v~Q~~~lf~~ti~~nl~~~~~---~------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~l 1056 (1293)
++|+||++.+|..|+++|+.+... . .++++.++++.+++.+++ .....+.+.+||||||||++|
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv~l 153 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRLCI 153 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHHHH
Confidence 999999999998999999964321 0 011233344444433222 123455678899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1057 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1057 Arall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 154 ARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999999987778999999999999876 999999999999999999998754
No 160
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6.3e-41 Score=370.91 Aligned_cols=216 Identities=34% Similarity=0.548 Sum_probs=192.9
Q ss_pred CccEEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhh
Q 000774 906 SGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 984 (1293)
Q Consensus 906 ~g~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~ 984 (1293)
.+.++++|++++|++. ..++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+....++
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4569999999999743 236999999999999999999999999999999999999999999999999988777777788
Q ss_pred hceEEccccccccccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 985 ILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
.++|+||++.+|..|+++|+.+... ....++.+..+..++.++++.+|.|+++.......+||||||||++|||||+++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 9999999999998999999975322 223344555566678899999988999888888999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeE
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i 1121 (1293)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999999997777999999999999978999999999974
No 161
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-41 Score=382.64 Aligned_cols=217 Identities=29% Similarity=0.487 Sum_probs=182.4
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC--hHHHh
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~--~~~~r 983 (1293)
|+++||+++|++.. .++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ....|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996421 36999999999999999999999999999999999999999999999999997643 35678
Q ss_pred hhceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc--hhhhcCCCCCChhHHHHHHH
Q 000774 984 KILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD--AQVSEAGENFSVGQRQLLSL 1056 (1293)
Q Consensus 984 ~~i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~--~~~~~~~~~LSgGqkqrl~l 1056 (1293)
++||||||+| .+|..|+++|+.+.. ..++++..+. +.+.++.+ |+. +..+..+..||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 577889999997432 1222222211 12233332 343 44566778899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1057 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1057 Arall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
||||+.+|++|||||||++||+.+.+.+++.|+++.+ +.|||+|||+++++.. ||||++|++|++++.|+++++.+
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999998753 7899999999999865 99999999999999999999875
No 162
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-41 Score=382.68 Aligned_cols=215 Identities=28% Similarity=0.426 Sum_probs=184.3
Q ss_pred cEEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 908 SIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
.++++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999642 23599999999999999999999999999999999999999999999999999887888888999
Q ss_pred eEEccccc--cccccHhhhcCCCC---CCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 987 GIIPQSPV--LFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 987 ~~v~Q~~~--lf~~ti~~nl~~~~---~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
||+||+|. ++..|+++|+.+.. ..+. +.+.++++.++ ++...+....+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVG-----------MQDFKEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCC-----------CHhHhhCCcccCCHHHHHHHHHH
Confidence 99999983 55679999997531 1222 22344444444 44444555678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+..||||++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7899999999999877999999999999999999998753
No 163
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4e-41 Score=375.08 Aligned_cols=220 Identities=28% Similarity=0.469 Sum_probs=184.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i~ 987 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGGL--VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECCE--EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 4689999999743 69999999999999999999999999999999999999999999999999988776554 56799
Q ss_pred EEccccccccc-cHhhhcCCCCCCC-HHHH-------HHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSEHS-DADL-------WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~~~-~~~~-------~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
|+||++.+|.. |+++|+.+..... ...+ ........+.++++.+ |++...+....+||||||||++|||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999876 9999986432110 0000 0001112244555554 5666667778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
||+.+|++|||||||++||+.+.+.+++.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 9999999999999999999999999999999875 57899999999999877 99999999999999999998864
No 164
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-41 Score=381.42 Aligned_cols=212 Identities=26% Similarity=0.389 Sum_probs=181.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.||
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 38999999999633 36999999999999999999999999999999999999999999999999998877788888999
Q ss_pred EEcccc--ccccccHhhhcCCCCC---CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 988 IIPQSP--VLFSGTVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 988 ~v~Q~~--~lf~~ti~~nl~~~~~---~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
|+||+| .++..|+++|+.+... ... +++.++++.+++ ..........||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L-----------~~~~~~~~~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRM-----------WDFRDKPPYHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC-----------HHHhcCChhhCCHHHHHHHHHHH
Confidence 999998 5777899999975321 111 223334444443 33344455689999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
||+.+|++|||||||++||+.+...+.+.|+++. .++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999999875 47899999999999865 9999999999999999987653
No 165
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.7e-41 Score=371.18 Aligned_cols=202 Identities=29% Similarity=0.427 Sum_probs=170.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH---HHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~r~~ 985 (1293)
++++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+.
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964323699999999999999999999999999999999999999999999999998766543 36788
Q ss_pred ceEEccccccccc-cHhhhcCCCC---CCC----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~---~~~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
++|+||++.+|.. |+++|+.+.. ... ++++.++++..+ ++........+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVG-----------LEGKAHALPMQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHHHHH
Confidence 9999999998864 9999986421 111 123344444444 33444455568999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeE
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1121 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 1121 (1293)
|||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 37899999999999876 999999999975
No 166
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.8e-41 Score=389.95 Aligned_cols=216 Identities=27% Similarity=0.460 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|+.||
T Consensus 41 ~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 49999999999753 6999999999999999999999999999999999999999999999999987643 46788999
Q ss_pred EEcccccccc-ccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~-~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
|+||++.++. .|+++|+.++.. ....+..+. +.++++. .++.........+||||||||++|||||+.+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~--~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~ 190 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEF--ARLESKADARVSDLSGGMKRRLTLARALIND 190 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHH--cCCchhhCCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999875 599999974321 122211111 2233333 3455555666678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|++|||||||+|||+.+++.+++.|+++. .++|||++||+++++.. ||||++|++|+++..|+++++.+.
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999875 47999999999999977 999999999999999999999754
No 167
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=372.24 Aligned_cols=214 Identities=26% Similarity=0.418 Sum_probs=180.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 3 l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGDF--VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECCE--EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999999876543 3568999
Q ss_pred Ecccccccc-ccHhhhcCCCCCC-------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFS-GTVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~~~-------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||+|.+|. .|+++|+.+.... ...+.. ..+.+.++.+ |++........+||||||||++|||||
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al 151 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARAL 151 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 999999886 5999999753211 111111 1123344443 455555666778999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 152 AVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 999999999999999999999999999998753 6899999999998766 999999999999999999998753
No 168
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-41 Score=374.79 Aligned_cols=220 Identities=29% Similarity=0.440 Sum_probs=180.7
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC---hHHHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---LMDLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~---~~~~r~~ 985 (1293)
++++|++++|+++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4689999999752 36999999999999999999999999999999999999999999999999998766 4557788
Q ss_pred ceEEcccccccc-ccHhhhcCCCCCCCHH---HHH---HHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 986 LGIIPQSPVLFS-GTVRFNLDPFSEHSDA---DLW---EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 986 i~~v~Q~~~lf~-~ti~~nl~~~~~~~~~---~~~---~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
++|+||++.+|. .|+++|+.+....... .+. .......+.+.++.+ ++....+..+.+||||||||++|||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHHH
Confidence 999999998886 5999998632110000 000 000011123344442 4555556677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
||+.+|+||||||||++||+.+.+.+.+.|+++. .++|||++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 9999999999999999999999999999999875 37899999999999985 9999999999999999998874
No 169
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.2e-41 Score=370.07 Aligned_cols=214 Identities=26% Similarity=0.435 Sum_probs=178.9
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++||++.|++...++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 478999999975223699999999999999999999999999999999999999999999999998764 3566788999
Q ss_pred Ecccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|. .|+++|+.+.. .....+.. ..+.++++.+ ++.........+||||||||++|||||+.+|
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 152 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIK-----EEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGGP 152 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcCC
Confidence 999999884 69999986421 11111111 1123333332 4444445556789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 153 SVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999998777999999999999876 999999999999999998875
No 170
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-42 Score=348.85 Aligned_cols=207 Identities=26% Similarity=0.392 Sum_probs=177.3
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCC-------------------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDA------------------- 343 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~------------------- 343 (1293)
+.++++|+++.|+ ++.+|+|||++|++++++|++|||||||||||+++.+..+...|.
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 4689999999996 478999999999999999999999999999999999998876531
Q ss_pred ceeecCcEEEEcCCccccCccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 344 SAVIRGTVAYVPQVSWIFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 344 ~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
...+|++||+|+|.|.-|..||+|||.+|.. .. ++.++++++.++|-+.... .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 1225678999999999999999999999842 11 2456777777777655442 24567788999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||++|||||.-+|+|||||||||+|||.+..+|.+ ++...+++-|+|+|||.+....+ +|++..+..|++++.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEe-Li~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEE-LITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHH-HHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 99999999999999999999999999999999976 55556678999999999998876 59999999999999999999
Q ss_pred Hhhcc
Q 000774 496 LSNNG 500 (1293)
Q Consensus 496 l~~~~ 500 (1293)
+..+.
T Consensus 235 iF~~P 239 (253)
T COG1117 235 IFTNP 239 (253)
T ss_pred hhcCc
Confidence 88764
No 171
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=9.2e-41 Score=389.57 Aligned_cols=217 Identities=23% Similarity=0.383 Sum_probs=183.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++ .+++|+|
T Consensus 3 L~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~~ 78 (353)
T PRK10851 3 IEIANIKKSFGRT--QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVGF 78 (353)
T ss_pred EEEEEEEEEeCCe--EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999999977654 4568999
Q ss_pred Eccccccccc-cHhhhcCCCCC-------CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~-------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
|||++.+|.. |+++|+.+... .+..+.. ..+.+.++.+ +++...+..+.+||||||||++|||||
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalArAL 151 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIK-----AKVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALARAL 151 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHH
Confidence 9999999975 99999975321 1111111 1122333332 444445566678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCC
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1136 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 1136 (1293)
+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+||||++++.. ||||++|++|++++.|+++++..++..
T Consensus 152 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~ 230 (353)
T PRK10851 152 AVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPAT 230 (353)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 999999999999999999999999999998754 6899999999999877 999999999999999999999875443
No 172
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.8e-41 Score=369.75 Aligned_cols=216 Identities=29% Similarity=0.455 Sum_probs=180.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i~ 987 (1293)
|+++||+++|++. ++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 4789999999753 69999999999999999999999999999999999999999999999999987776654 56799
Q ss_pred EEccccccccc-cHhhhcCCCCCCC-HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSEHS-DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~~~-~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
|+||++.+|.. |+++|+.+..... ..+.. ..+.+.++.++ +++...+....+||||||||++|||||+.+|+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 152 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRK-----ARLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRPK 152 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHH-----HHHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999876 9999996432211 11111 11222233321 23444556677899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+|||||||++||+.+++.+++.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 153 LLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 999999999999999999999999875 47899999999999876 99999999999999999888753
No 173
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.6e-41 Score=391.94 Aligned_cols=205 Identities=29% Similarity=0.438 Sum_probs=177.2
Q ss_pred CceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH----hhhceEEccccccccc-
Q 000774 924 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL----RKILGIIPQSPVLFSG- 998 (1293)
Q Consensus 924 ~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~----r~~i~~v~Q~~~lf~~- 998 (1293)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++..+ |+.|+||||++.+|+.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 69999999999999999999999999999999999999999999999999999888877 7789999999999975
Q ss_pred cHhhhcCCCC---CCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000774 999 TVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 1071 (1293)
Q Consensus 999 ti~~nl~~~~---~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDE 1071 (1293)
||++|+.+.. .... +++.++++.+ |++...++.+.+||||||||++|||||+.+|+||||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~v-----------gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLV-----------GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-----------CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999996421 1122 2233334433 45555666677899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHH
Q 000774 1072 ATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1072 pTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 1139 (1293)
||++||+.+.+.+++.+.++. .++|+|+|||+++++.. ||||++|++|++++.|++++++++....|.
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 999999999999999998864 37999999999998766 999999999999999999999876544443
No 174
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.6e-40 Score=372.52 Aligned_cols=216 Identities=29% Similarity=0.493 Sum_probs=182.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC-----cceEEECCeecCCC--ChHH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAKF--GLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~-----~G~I~i~g~~i~~~--~~~~ 981 (1293)
++++||+++|++. ++++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999753 5999999999999999999999999999999999999998 99999999998753 3456
Q ss_pred HhhhceEEccccccccccHhhhcCCCC---C-CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS---E-HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~-~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
.|+.++|+||++.+|..|+++|+.+.. . ... +.+.++++..++.+.+ ....+....+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEV-------KDRLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcch-------hhHhhCCcccCCHHHHHH
Confidence 788899999999998899999986421 1 111 1223333333332111 034556678899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999875
Q ss_pred c
Q 000774 1133 N 1133 (1293)
Q Consensus 1133 ~ 1133 (1293)
.
T Consensus 233 ~ 233 (247)
T TIGR00972 233 N 233 (247)
T ss_pred C
Confidence 4
No 175
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=8.8e-41 Score=390.07 Aligned_cols=221 Identities=24% Similarity=0.419 Sum_probs=186.5
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCc--ceEEECCeecCCCChHHHhh
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER--GRILIDGFDIAKFGLMDLRK 984 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~--G~I~i~g~~i~~~~~~~~r~ 984 (1293)
+.++++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...++ .++
T Consensus 4 ~~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~r 79 (362)
T TIGR03258 4 GGIRIDHLRVAYGAN--TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HKR 79 (362)
T ss_pred eEEEEEEEEEEECCe--EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HHC
Confidence 569999999999753 69999999999999999999999999999999999999999 999999999987665 356
Q ss_pred hceEEccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 985 ILGIIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
.||||+|++.+|.. |+++|+.+.. .....+..+ .+.+.++. .|++...+....+||||||||++|||||
T Consensus 80 ~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~--~gL~~~~~~~~~~LSgGq~QRvaLARAL 152 (362)
T TIGR03258 80 GLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKL--VGLGDAAAHLPAQLSGGMQQRIAIARAI 152 (362)
T ss_pred CEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHh--cCCCchhhCChhhCCHHHHHHHHHHHHH
Confidence 89999999999976 9999997421 122222111 12233333 2455556666788999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC---CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCC
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK---SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1136 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~---~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 1136 (1293)
+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+||||++++.. ||||++|++|++++.|+++++.+++..
T Consensus 153 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~ 232 (362)
T TIGR03258 153 AIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPAD 232 (362)
T ss_pred hcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCc
Confidence 999999999999999999999999999988654 6899999999999866 999999999999999999999876543
Q ss_pred hH
Q 000774 1137 SF 1138 (1293)
Q Consensus 1137 ~~ 1138 (1293)
.|
T Consensus 233 ~~ 234 (362)
T TIGR03258 233 GF 234 (362)
T ss_pred HH
Confidence 33
No 176
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=379.39 Aligned_cols=214 Identities=27% Similarity=0.439 Sum_probs=184.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++||+++|+...+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.||
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 38999999999643346999999999999999999999999999999999999999999999999998887777888999
Q ss_pred EEcccc--ccccccHhhhcCCCC---CCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 988 IIPQSP--VLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 988 ~v~Q~~--~lf~~ti~~nl~~~~---~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
|+||++ .+++.|+.+|+.+.. .... +++.++++..+ ++.........||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVG-----------MEDFLNREPHRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcC-----------ChhhhhCCcccCCHHHHHHHHHHH
Confidence 999998 455679999997531 1122 22333444434 444445556789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhh
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+..||||++|++|++++.|+++++.+
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999998764 789999999999988899999999999999999999875
No 177
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-40 Score=392.50 Aligned_cols=212 Identities=26% Similarity=0.433 Sum_probs=185.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++.+.+...++++||
T Consensus 3 ~L~~~nls~~y~~~--~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGDT--TVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECCE--EEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 38999999999753 6999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEcccccc-ccccHhhhcCCCCC-----C---C---HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 988 IIPQSPVL-FSGTVRFNLDPFSE-----H---S---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 988 ~v~Q~~~l-f~~ti~~nl~~~~~-----~---~---~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
|+||++.+ |+.|+++|+.+... . . ++.+.++++.+++.+ ..+....+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~-----------~~~~~~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQ-----------FADRPVTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHH
Confidence 99999987 46799999864311 1 1 223445555544433 334456789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+++|+||||||||++||+.++..+++.|+++. .++|||++||+++.+.. |||+++|++|++++.|++++++.
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 9999999999999999999999999999999999875 47899999999999966 99999999999999999999875
No 178
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-41 Score=368.28 Aligned_cols=206 Identities=26% Similarity=0.449 Sum_probs=171.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGSV--RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCCe--eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 4689999999753 69999999999999999999999999999999999999999999999999876543 4678999
Q ss_pred Ecccccccc-ccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|. .|+++|+.+... ....+.. ..+.+.++.+ |++........+||||||||++|||||+.+|
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 149 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIR-----ARVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALAREP 149 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 599999964211 1111111 1123334432 4555556666789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
++|||||||++||+.+.+.+++.|+++.+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 150 ~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 150 SLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998653 7899999999999876 9999999999998765
No 179
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=380.37 Aligned_cols=217 Identities=23% Similarity=0.396 Sum_probs=181.7
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC----CChHH
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----FGLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~----~~~~~ 981 (1293)
|+++||+++|++.. +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999863 33556
Q ss_pred HhhhceEEcccc--ccccccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 000774 982 LRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 982 ~r~~i~~v~Q~~--~lf~~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+|+.+|||+|+| .+|..|+.+|+.+... ...++..+ .+.+.++.+ |+. ........+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 788999999998 6888899999975321 12222111 122333332 443 2345667889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|+||||||||++||+.+.+.+.+.|+++. .++|||++||+++.+.. ||||++|++|++++.|+++++..
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999999999999999999999999998865 47899999999999865 99999999999999999999874
No 180
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=372.71 Aligned_cols=217 Identities=27% Similarity=0.457 Sum_probs=184.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+....++.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4689999999752 369999999999999999999999999999999999999999999999999988777778889999
Q ss_pred Ecccccccc-ccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcch--hhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 989 IPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDA--QVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~--~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+||++.+|. .|+++|+.+... ....+ ....+.+.++.+ |+.. ...+.+.+||||||||++|||||++
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~-----~~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~~ 152 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEK-----IRERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALAA 152 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999886 599999964311 11111 112234455553 4443 4566778899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 153 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 153 DPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999998753 7899999999998766 999999999999999999988654
No 181
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=374.20 Aligned_cols=217 Identities=24% Similarity=0.396 Sum_probs=182.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGDF--QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECCe--eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 49999999999743 69999999999999999999999999999999999975 689999999999864 3445
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.++|+||++.+|..|+++|+.+.. .. . ++++.++++.+++.+.+ ....++.+.+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHHHH
Confidence 6788999999999999889999996421 11 1 12334444444433221 22345667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667899999999999866 9999999999999999999987
Q ss_pred hc
Q 000774 1132 SN 1133 (1293)
Q Consensus 1132 ~~ 1133 (1293)
+.
T Consensus 237 ~~ 238 (253)
T PRK14242 237 TR 238 (253)
T ss_pred cC
Confidence 54
No 182
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=373.33 Aligned_cols=219 Identities=25% Similarity=0.405 Sum_probs=183.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~--~~~~ 980 (1293)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTDF--KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCCc--eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 58999999999753 699999999999999999999999999999999999997 48999999998853 2345
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC----CC----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE----HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~----~~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
..|+.|+|+||++.+|..|+++|+.+... .. ++.+.++++.+++.+.+ ....+..+.+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-------KDKLNTNALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-------HHHHhCCcccCCHHHHH
Confidence 67888999999999988899999964311 11 12234444444432211 22345567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++++.. ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667999999999999866 9999999999999999999997
Q ss_pred hcCC
Q 000774 1132 SNEG 1135 (1293)
Q Consensus 1132 ~~~~ 1135 (1293)
+...
T Consensus 238 ~~~~ 241 (254)
T PRK14273 238 FNPK 241 (254)
T ss_pred hCCC
Confidence 6543
No 183
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=379.64 Aligned_cols=218 Identities=22% Similarity=0.407 Sum_probs=184.1
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC----ChHH
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~----~~~~ 981 (1293)
++++||+++|++.. .++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 3699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhhhceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 000774 982 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 982 ~r~~i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+|++||||||+| .+|..|+.+|+.+.. ..+..+..+ .+.+.++. .|++ ...+..+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~--~gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN-----YAHRLLMD--LGFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHH--cCCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 578889999997532 112222221 12344444 3676 3456678899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 37999999999999865 99999999999999999999875
Q ss_pred c
Q 000774 1133 N 1133 (1293)
Q Consensus 1133 ~ 1133 (1293)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 3
No 184
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.3e-40 Score=390.04 Aligned_cols=216 Identities=24% Similarity=0.405 Sum_probs=184.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ++.||
T Consensus 14 ~L~l~~l~~~~~~~--~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 89 (375)
T PRK09452 14 LVELRGISKSFDGK--EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHVN 89 (375)
T ss_pred eEEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999753 689999999999999999999999999999999999999999999999999876654 56899
Q ss_pred EEccccccccc-cHhhhcCCCCC---CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~---~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
||||++.+|.. ||++|+.+... ... +++.++++..++ +......+.+||||||||++||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~p~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQL-----------EEFAQRKPHQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 122 223344444444 444455557899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCC
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1136 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 1136 (1293)
|+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+||||++++.. ||||++|++|++++.|+++++.+++..
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~ 238 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKN 238 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999998754 7899999999999766 999999999999999999999876543
Q ss_pred hH
Q 000774 1137 SF 1138 (1293)
Q Consensus 1137 ~~ 1138 (1293)
.|
T Consensus 239 ~~ 240 (375)
T PRK09452 239 LF 240 (375)
T ss_pred HH
Confidence 33
No 185
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.3e-40 Score=372.77 Aligned_cols=220 Identities=28% Similarity=0.411 Sum_probs=179.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh---HHHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~---~~~r~~ 985 (1293)
++++||+++|+.+ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+.
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999722 369999999999999999999999999999999999999999999999999877654 346788
Q ss_pred ceEEcccccccc-ccHhhhcCCCCCCCH---HHHH---HHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 986 LGIIPQSPVLFS-GTVRFNLDPFSEHSD---ADLW---EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 986 i~~v~Q~~~lf~-~ti~~nl~~~~~~~~---~~~~---~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
++|+||++.+|. .|+++|+.+...... ..+. .......+.+.++.+ |++...+..+.+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 158 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIAR 158 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHH
Confidence 999999998886 599999964211000 0000 000111223344443 4555556677889999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 159 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 159 ALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999999998743 7899999999999866 9999999999999999998863
No 186
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-40 Score=383.59 Aligned_cols=215 Identities=24% Similarity=0.409 Sum_probs=185.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+|+++||
T Consensus 3 l~~~~l~~~~~~~--~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGTQ--NALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECCE--EEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 7899999999743 69999999999999999999999999999999999999999999999999876 44577889999
Q ss_pred Eccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|.. |++||+.++.. ...++..+ .+.+.++.+ |++...+.....||||||||++|||||+++|
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p 152 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHDP 152 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999876 99999964321 11111111 123344443 5666667777899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
++|||||||+|||+.+.+.+++.|+++.+++|||++||+++++.. ||||++|++|++++.|+++++.+.
T Consensus 153 ~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 153 KVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 999999999999999999999999998778999999999999987 999999999999999999999754
No 187
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1e-40 Score=362.70 Aligned_cols=202 Identities=29% Similarity=0.487 Sum_probs=175.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeec-------------Cc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~-------------~~ 350 (1293)
.++++|++|+|+ ++++|+|+||+|++||+++|+||||||||||||+|+|+++|.+|. +.+. +.
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~-V~l~g~~i~~~~~kelAk~ 77 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGE-VLLDGKDIASLSPKELAKK 77 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCE-EEECCCchhhcCHHHHhhh
Confidence 478999999996 578999999999999999999999999999999999999999984 3332 36
Q ss_pred EEEEcCCccc-cCccHHHHHccCCC-----------CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 351 VAYVPQVSWI-FNATVRDNILFGSA-----------FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 351 i~~v~Q~~~l-~~~Tv~eni~~g~~-----------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
+|||||.+.. +..||+|-+.+|+. .|.+.+.++++.+++.+..+.. ..+||||||||
T Consensus 78 ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQr 146 (258)
T COG1120 78 LAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQR 146 (258)
T ss_pred EEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHH
Confidence 9999999765 68899999999852 1233567788888888766542 35899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchh-hhCCeEEEEeCCeEEEecChHHH
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l 496 (1293)
+.|||||+++|+|++||||||+||....-.+++.+.+.. .+|+|+|+|.||++.. ..||++++|++|+++.+|++++.
T Consensus 147 v~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ev 226 (258)
T COG1120 147 VLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEV 226 (258)
T ss_pred HHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchh
Confidence 999999999999999999999999999999998776654 4589999999999875 56999999999999999999998
Q ss_pred hhcc
Q 000774 497 SNNG 500 (1293)
Q Consensus 497 ~~~~ 500 (1293)
++.+
T Consensus 227 lT~e 230 (258)
T COG1120 227 LTEE 230 (258)
T ss_pred cCHH
Confidence 8754
No 188
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=373.00 Aligned_cols=219 Identities=25% Similarity=0.397 Sum_probs=184.8
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCh
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 979 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~ 979 (1293)
+.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 12 ~~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 12 SKIQVRNLNFYYGKF--HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred ceEEEEEEEEEeCCe--EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 459999999999753 69999999999999999999999999999999999986 589999999999853 345
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCC----CCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFS----EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1051 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~----~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqk 1051 (1293)
..+|++|+|+||++.+|..|+++|+.+.. ..+. +++.++++.+++.+ ++....++...+||||||
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 162 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWN-------EVKDKLHQSGYSLSGGQQ 162 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCCh-------hhHHHHhcCCCCCCHHHH
Confidence 67788999999999999899999996421 1122 22334444433321 122345667788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1052 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1052 qrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
||++|||||+.+|+||||||||++||+.+++.+.+.|++...++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 163 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 163 QRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998667899999999999876 999999999999999999998
Q ss_pred hhcC
Q 000774 1131 LSNE 1134 (1293)
Q Consensus 1131 ~~~~ 1134 (1293)
....
T Consensus 243 ~~~~ 246 (260)
T PRK10744 243 FTKP 246 (260)
T ss_pred HhCC
Confidence 7543
No 189
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=370.38 Aligned_cols=217 Identities=28% Similarity=0.458 Sum_probs=181.8
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---Hh
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~r 983 (1293)
|+++|++++|++.. .++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 26999999999999999999999999999999999999999999999999988765543 47
Q ss_pred hhceEEcccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 984 KILGIIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
+.++|+||++.+|. .|+++|+.+.. .....+. ...+.+.++.+ +++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 78999999999997 59999986421 1111111 11233444443 45555556667899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999998753 7899999999999876 99999999999999999988864
No 190
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=391.93 Aligned_cols=216 Identities=21% Similarity=0.337 Sum_probs=182.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++ .+++|||
T Consensus 4 l~i~~l~~~~~~~--~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i~~ 79 (369)
T PRK11000 4 VTLRNVTKAYGDV--VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGVGM 79 (369)
T ss_pred EEEEEEEEEeCCe--EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCEEE
Confidence 8999999999753 69999999999999999999999999999999999999999999999999987665 3567999
Q ss_pred Eccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|.. |+++|+.+... ....+.. ..+.+.++.+ |++...+....+||||||||++|||||+.+|
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~~P 152 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEIN-----QRVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVAEP 152 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999975 99999975321 1211111 1122333332 4444455566789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCC
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 1135 (1293)
++|||||||++||+.+++.+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++...+.
T Consensus 153 ~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 153 SVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999998653 7899999999999876 99999999999999999999986543
No 191
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=372.71 Aligned_cols=218 Identities=28% Similarity=0.438 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCCChHHH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFGLMDL 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~~~~~~ 982 (1293)
.++++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+...+
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQV--EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 38999999999753 699999999999999999999999999999999999984 69999999999988787788
Q ss_pred hhhceEEccccccc-cccHhhhcCCCCC---C--C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 983 RKILGIIPQSPVLF-SGTVRFNLDPFSE---H--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf-~~ti~~nl~~~~~---~--~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
|+.|||+||++.+| ..|+++|+.+... . . ++++.++++..++.+. ++...+....+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDE-------VKDRLDAPAGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcc-------hhhhhcCCcccCCHHHHH
Confidence 88999999999766 5699999964211 0 1 1223334444333221 122345566789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999997668999999999999865 9999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
+..
T Consensus 234 ~~~ 236 (250)
T PRK14247 234 TNP 236 (250)
T ss_pred cCC
Confidence 543
No 192
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=379.59 Aligned_cols=217 Identities=28% Similarity=0.403 Sum_probs=181.5
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC----CChHH
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----FGLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~----~~~~~ 981 (1293)
++++|++++|++.. .++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 369999999999999999999999999999999999999999999999999853 34556
Q ss_pred HhhhceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 000774 982 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 982 ~r~~i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~ 1055 (1293)
.|+.||||||+| .+|+.|+++|+.+.. ..+.++..+ .+.+.++.+ |++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 788899999998 578889999996421 112222211 122333432 454 3345667889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|++|||||||++||+.+...+.+.|+++.. +.|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999866 99999999999999999999874
No 193
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=373.19 Aligned_cols=219 Identities=23% Similarity=0.432 Sum_probs=184.3
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCh
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 979 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~ 979 (1293)
..|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .++
T Consensus 12 ~~l~i~nl~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 12 IIISLQNVTISYGTF--EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred ceEEEEeEEEEECCE--EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 459999999999753 69999999999999999999999999999999999987 689999999999853 456
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCCC---CC---HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFSE---HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~~---~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
..+|+.++|+||++.+|..|+++|+.+... .. ++++.++++.+++.. +++...+....+||||||||
T Consensus 90 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 90 VEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred HHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHHHH
Confidence 677889999999999998899999975321 11 122333344333221 23344566678899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeC-----------CeE
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDS-----------GRV 1121 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~-----------G~i 1121 (1293)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++ |++
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~ 242 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYL 242 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceE
Confidence 99999999999999999999999999999999999988667899999999999876 999999996 678
Q ss_pred eeecChhhhhhcC
Q 000774 1122 LEYDTPEELLSNE 1134 (1293)
Q Consensus 1122 ~~~g~~~el~~~~ 1134 (1293)
++.|+++++....
T Consensus 243 ~~~~~~~~~~~~~ 255 (269)
T PRK14259 243 VEFNETKKIFNSP 255 (269)
T ss_pred EEeCCHHHHHhCc
Confidence 9999999997543
No 194
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.6e-40 Score=382.68 Aligned_cols=216 Identities=29% Similarity=0.443 Sum_probs=182.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ....|+++|
T Consensus 4 ~i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGDK--VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCCe--EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 48999999999753 699999999999999999999999999999999999999999999999998653 356788999
Q ss_pred EEcccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
|+||++.++. .|+++|+.++. ..+..+..+. +.+.++. .++.........+||||||||++|||||+.+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~--~~l~~~~~~~~~~LSgG~~qrv~la~al~~~ 153 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEF--ARLESKADVRVALLSGGMKRRLTLARALIND 153 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHH--CCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999999885 59999986321 1222222211 2233333 2454555566678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|++|||||||+|||+.+.+.+++.|+++. .++|||++||+++++.. ||||++|++|++++.|+++++...
T Consensus 154 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 154 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999875 47899999999999976 999999999999999999998754
No 195
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-40 Score=366.38 Aligned_cols=208 Identities=28% Similarity=0.465 Sum_probs=176.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++. ++|+|+||++.+||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....++++++|
T Consensus 1 i~~~~~~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGDF--EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVR-EPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECCE--EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCc-ChHHHhhcEEE
Confidence 4789999999753 69999999999999999999999999999999999999999999999998865 33566788999
Q ss_pred Eccccccccc-cHhhhcCCCC---CCC----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~---~~~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||++.++.. |+++|+.+.. ... ++++.++++.. |++........+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFV-----------GLLEAADRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCHHHhhCChhhCCHHHHHHHHHHHHH
Confidence 9999998875 9999986421 111 11233333333 344444555678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. |||+++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999998653 6899999999999876 999999999999999988775
No 196
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=373.31 Aligned_cols=219 Identities=26% Similarity=0.427 Sum_probs=184.2
Q ss_pred CccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCC--CC
Q 000774 906 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FG 978 (1293)
Q Consensus 906 ~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~--~~ 978 (1293)
.+.|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+
T Consensus 17 ~~~l~~~nl~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~ 94 (267)
T PRK14235 17 EIKMRARDVSVFYGEK--QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLD 94 (267)
T ss_pred CceEEEEeEEEEECCE--EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccc
Confidence 3469999999999753 699999999999999999999999999999999999975 89999999999864 34
Q ss_pred hHHHhhhceEEccccccccccHhhhcCCCC---CC--C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChh
Q 000774 979 LMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 1049 (1293)
Q Consensus 979 ~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~--~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgG 1049 (1293)
...+|+.++|+||++.+|..|+.+|+.+.. .. . ++++.++++..++.+.+ ....+..+.+||||
T Consensus 95 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG 167 (267)
T PRK14235 95 VVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSGG 167 (267)
T ss_pred hHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHH
Confidence 556788999999999999889999996421 11 1 12234444444432221 12345567789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChh
Q 000774 1050 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 1128 (1293)
Q Consensus 1050 qkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~ 1128 (1293)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++..++|||++||+++.+.. ||++++|++|++++.|+++
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 247 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTE 247 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999987667899999999999876 9999999999999999999
Q ss_pred hhhhc
Q 000774 1129 ELLSN 1133 (1293)
Q Consensus 1129 el~~~ 1133 (1293)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14235 248 KMFTN 252 (267)
T ss_pred HHHhC
Confidence 98754
No 197
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.7e-40 Score=369.07 Aligned_cols=215 Identities=29% Similarity=0.467 Sum_probs=182.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i~ 987 (1293)
++++||+++|++. ++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGKR--KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCCE--EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 4789999999743 69999999999999999999999999999999999999999999999999887766553 46799
Q ss_pred EEccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
|+||++.+|.. |+++|+.+... ....+. ...+.++++.+ |++........+||||||||++|||||+.+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKER-----EEKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATN 151 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999986 99999864211 111111 11233445543 566666777789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99999999999999999999999998865 47899999999998776 99999999999999999988764
No 198
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=378.97 Aligned_cols=218 Identities=22% Similarity=0.349 Sum_probs=180.4
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC---------
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--------- 976 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~--------- 976 (1293)
|+++||+++|++.. .++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999996432 259999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CChHHHhhhceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc
Q 000774 977 ---------------FGLMDLRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD 1036 (1293)
Q Consensus 977 ---------------~~~~~~r~~i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~ 1036 (1293)
.+...+|+.||||||+| .+|..|+++|+.+.. ....+++.+ .+.+.++. .|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~--~gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKK-----RAAKYIEL--VGLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHH--cCCC
Confidence 13456788999999986 578789999997532 122222211 12233333 2443
Q ss_pred -hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEE
Q 000774 1037 -AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRI 1113 (1293)
Q Consensus 1037 -~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i 1113 (1293)
...+....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||+|||+++.+.. ||||
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 34556678899999999999999999999999999999999999999999998865 47899999999998765 9999
Q ss_pred EEEeCCeEeeecChhhhhhc
Q 000774 1114 LLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1114 ~vl~~G~i~~~g~~~el~~~ 1133 (1293)
++|++|++++.|+++++.+.
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999998753
No 199
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=372.55 Aligned_cols=217 Identities=28% Similarity=0.421 Sum_probs=182.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecC--CCChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA--KFGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~--~~~~~ 980 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGSN--HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCCe--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 38999999999753 699999999999999999999999999999999999997 4999999999986 44556
Q ss_pred HHhhhceEEccccccccc-cHhhhcCCCC---CC--CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhH
Q 000774 981 DLRKILGIIPQSPVLFSG-TVRFNLDPFS---EH--SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 1050 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~-ti~~nl~~~~---~~--~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGq 1050 (1293)
.+|++++|+||++.+|.. |+.+|+.+.. .. .. +.+.++++..++.+. +.........+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDE-------VKDRLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccc-------hhhhhccChhhCCHHH
Confidence 678899999999999976 9999996421 11 11 123333333332211 1233455677899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhh
Q 000774 1051 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1129 (1293)
Q Consensus 1051 kqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 1129 (1293)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999997667999999999999876 99999999999999999999
Q ss_pred hhhc
Q 000774 1130 LLSN 1133 (1293)
Q Consensus 1130 l~~~ 1133 (1293)
+.+.
T Consensus 235 ~~~~ 238 (253)
T PRK14267 235 VFEN 238 (253)
T ss_pred HHhC
Confidence 8754
No 200
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.8e-40 Score=367.96 Aligned_cols=215 Identities=28% Similarity=0.443 Sum_probs=183.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .++.++|
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~-~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGAR--RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRA-ALARLGV 78 (236)
T ss_pred EEEEeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChh-hhhhEEE
Confidence 7899999999643 699999999999999999999999999999999999999999999999998776543 4468999
Q ss_pred Eccccccc-cccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLF-SGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf-~~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.++ ..|+++|+..... ....+.. ..+.++++.+ |++...+....+||||||||++|||||+++|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999875 5699999964321 1111111 1234455543 6666667777899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+..||++++|++|++++.|+++++.+.
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 9999999999999999999999999875 37899999999999978999999999999999999988754
No 201
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.5e-40 Score=365.98 Aligned_cols=206 Identities=28% Similarity=0.407 Sum_probs=172.4
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH----H
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD----L 982 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~----~ 982 (1293)
|+++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++.. .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999997521 36999999999999999999999999999999999999999999999999988766432 3
Q ss_pred hhhceEEccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 983 RKILGIIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
++.++|+||++.+|.. |+++|+.+... ....+. ...+.+.++.+ |++...+..+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5679999999999876 99999864221 111111 11233444443 5666666677889999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeE
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i 1121 (1293)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||+|||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998754 7899999999999878999999999974
No 202
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-41 Score=352.70 Aligned_cols=220 Identities=28% Similarity=0.449 Sum_probs=191.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i~ 987 (1293)
+++++++++|++- .+++||||++++||++||+|||||||||++|+|+|+|+|++|+|.++|.||..++++.. |..|+
T Consensus 5 L~v~~l~k~FGGl--~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGGL--TAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCCE--EEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 6899999999864 69999999999999999999999999999999999999999999999999999998886 44599
Q ss_pred EEccccccccc-cHhhhcCCCCC------------CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE------------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1054 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~------------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl 1054 (1293)
--+|.+.+|++ ||.||+..... ....+..++.++ +.+.++. .||+...++...+||+|||+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~--A~~~Le~--vgL~~~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARER--ARELLEF--VGLGELADRPAGNLSYGQQRRL 158 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHH--HHHHHHH--cCCchhhcchhhcCChhHhHHH
Confidence 99999999976 99999853210 011112222222 3455555 4788888889999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1055 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1055 ~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
.|||||+.+|++|+||||.+||.+.....+.+.|+++.+ +.|+++|-|||+.+.. ||||+||+.|+++++|+|+|..
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHh
Confidence 999999999999999999999999999999999999875 4899999999999988 9999999999999999999998
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
+++
T Consensus 239 ~dp 241 (250)
T COG0411 239 NNP 241 (250)
T ss_pred cCH
Confidence 653
No 203
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.6e-40 Score=361.91 Aligned_cols=198 Identities=27% Similarity=0.454 Sum_probs=167.7
Q ss_pred EEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEE
Q 000774 910 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 989 (1293)
Q Consensus 910 ~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 989 (1293)
+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 368999999752 369999999999999999999999999999999999999999999999998853 4567789999
Q ss_pred cccc--ccccccHhhhcCCCCCC---CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 990 PQSP--VLFSGTVRFNLDPFSEH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 990 ~Q~~--~lf~~ti~~nl~~~~~~---~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
||++ .+|..|+++|+.+.... .++++.++++..++. .........||||||||++|||||+.+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLY-----------ALKERHPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCc-----------hhcCCCchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 36678999999753211 123445555554443 3344455689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEe
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 1122 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~ 1122 (1293)
++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999874 57899999999999876 9999999999975
No 204
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=376.30 Aligned_cols=217 Identities=29% Similarity=0.513 Sum_probs=182.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecC--CCChHHHhhh
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA--KFGLMDLRKI 985 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~--~~~~~~~r~~ 985 (1293)
.|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+.
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 38999999999632 36999999999999999999999999999999999999999999999999984 3345667889
Q ss_pred ceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 986 LGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 986 i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||+||++ .+|+.|+++|+.+.. ..+..+..+. +.+.++. .|+....+..+.+||||||||++|||||
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~--~gL~~~~~~~~~~LS~G~~qrl~laraL 156 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKR--TGIEHLKDKPTHCLSFGQKKRVAIAGVL 156 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHH--CCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 99999998 567889999996421 1122221111 1222333 2444555667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+.. |||+++|++|++++.|+++++.+
T Consensus 157 ~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 157 VMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999998754 7899999999999875 99999999999999999999875
No 205
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.1e-39 Score=366.96 Aligned_cols=240 Identities=34% Similarity=0.621 Sum_probs=202.3
Q ss_pred HHHHHhhhhhcccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000774 260 RMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP 339 (1293)
Q Consensus 260 Ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~ 339 (1293)
.+.+++..+++. ....+.....+.|+++|+++.. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|
T Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p 89 (282)
T cd03291 16 GFGELLEKAKQE-NNDRKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEP 89 (282)
T ss_pred HHHHHHhccccc-ccccccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 455666654432 1222233345579999999952 4699999999999999999999999999999999999999
Q ss_pred CCCCceeecCcEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 340 VSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 340 ~~g~~~~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
++| .+.+.+.|+|++|++.+++.||+||+.++......++...++.+++.+.++.++.+.++.+++.+..||||||||+
T Consensus 90 ~~G-~I~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv 168 (282)
T cd03291 90 SEG-KIKHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARI 168 (282)
T ss_pred CCc-EEEECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHH
Confidence 998 6677888999999999998899999998754444455667777888888888998888889999999999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhc
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
+|||||+.+|++|||||||++||+.+.+.+.+.+++...+++|+|++||+++.+..||++++|++|+++..|+++++.+.
T Consensus 169 ~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 169 SLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL 248 (282)
T ss_pred HHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999998887665544567999999999999988999999999999999999998765
Q ss_pred cHHHHHH
Q 000774 500 GELFQKL 506 (1293)
Q Consensus 500 ~~~~~~~ 506 (1293)
...+...
T Consensus 249 ~~~~~~~ 255 (282)
T cd03291 249 RPDFSSK 255 (282)
T ss_pred chHHHHH
Confidence 4444433
No 206
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.4e-40 Score=361.51 Aligned_cols=202 Identities=27% Similarity=0.428 Sum_probs=173.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 478999999964 3699999999999999999999999999999999999999999999999988654 456788999
Q ss_pred Ecccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|. .|+++|+.++. ...++++.++++..++.+ ........||||||||++||||++.+|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKD-----------SAKKKVKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHH-----------HHhhhHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998885 69999986431 123344555555555443 334445679999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999865 47899999999999876 9999999999998765
No 207
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.1e-40 Score=368.30 Aligned_cols=220 Identities=21% Similarity=0.367 Sum_probs=184.9
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i~ 987 (1293)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 3 i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDGF--KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 7899999999753 69999999999999999999999999999999999999999999999999887776544 45699
Q ss_pred EEccccccccc-cHhhhcCCCCCCCHH---H---HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSEHSDA---D---LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~~~~~---~---~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
|+||++.+|.+ |+++|+.+....... . .........+.+.++.+ |++.........||||||||++||||+
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999999986 999999753211000 0 00001112234455543 566666677788999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+.+|++|||||||++||+.+.+.+++.|+++..++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999999999998777999999999999976 99999999999999999998864
No 208
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=366.47 Aligned_cols=212 Identities=25% Similarity=0.392 Sum_probs=177.1
Q ss_pred cEEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---H
Q 000774 908 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~ 982 (1293)
.++++||+++|++.. .++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999996432 36999999999999999999999999999999999999999999999999998877654 3
Q ss_pred h-hhceEEccccccccc-cHhhhcCCC---CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 983 R-KILGIIPQSPVLFSG-TVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 983 r-~~i~~v~Q~~~lf~~-ti~~nl~~~---~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
| +.++|+||++.+|.. |+++|+.+. ......+.. ..+.+.++.+ |++........+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN-----SRALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 579999999998875 999998641 111111111 1123344442 555555666788999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhccCEEEEEeCCeEeeecC
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~ 1126 (1293)
||++.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..+|++++|++|++++.|.
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999874 4789999999999998889999999999998765
No 209
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.2e-40 Score=374.17 Aligned_cols=217 Identities=20% Similarity=0.326 Sum_probs=182.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH---HHhh
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRK 984 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~r~ 984 (1293)
.|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. ..++
T Consensus 7 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGNR--CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 48999999999643 699999999999999999999999999999999999999999999999998776543 3467
Q ss_pred hceEEccccccccc-cHhhhcCCC----CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 985 ILGIIPQSPVLFSG-TVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~-ti~~nl~~~----~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
.++|+||++.+|.. |+.+|+.+. ......+.. ..+.+.++. .|+.........+||||||||++||||
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~--~gl~~~~~~~~~~LSgGq~qrv~lara 157 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEA--VGLRGAAKLMPSELSGGMARRAALARA 157 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHH--cCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999976 999998631 111111111 112233333 245445556677899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 158 IALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999998753 6899999999999877 999999999999999999998764
No 210
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.6e-40 Score=363.93 Aligned_cols=209 Identities=31% Similarity=0.521 Sum_probs=174.7
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
++++||+++|++.. +++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .+..+|+.+
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999997531 159999999999999999999999999999999999999999999999999875 455678899
Q ss_pred eEEccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+|+||++.+|.. |+++|+.+.. .....+.. ..+.+.++.+ |++........+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELT-----ARLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999885 9999986321 11111111 1123334432 45555566677899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999999875 47899999999999876 9999999999998754
No 211
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-40 Score=373.48 Aligned_cols=212 Identities=25% Similarity=0.451 Sum_probs=182.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 259999999999999999999999999999999999999999999999999987777778889999
Q ss_pred Eccccc--cccccHhhhcCCCC---CCCHH----HHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 989 IPQSPV--LFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 989 v~Q~~~--lf~~ti~~nl~~~~---~~~~~----~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
+||++. +|+.|+++|+.+.. ..+.+ .+.++++.. |+.......+..||||||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHML-----------GLEELRDRVPHHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHC-----------CChhHhcCCcccCCHHHHHHHHHHHH
Confidence 999983 67789999996421 12222 223333333 34444455567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||++||+++++.. ||||++|++|++++.|+++++.+
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 9999999999999999999999999999998753 7899999999999865 99999999999999999999975
No 212
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=387.91 Aligned_cols=223 Identities=30% Similarity=0.428 Sum_probs=182.7
Q ss_pred EEEEEEEEEecCCC----------------------CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcce
Q 000774 909 IKFEDVVLRYRPEL----------------------PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGR 966 (1293)
Q Consensus 909 i~~~~v~~~y~~~~----------------------~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~ 966 (1293)
|+++||++.|++.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+
T Consensus 5 i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~ 84 (400)
T PRK10070 5 LEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQ 84 (400)
T ss_pred EEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCE
Confidence 67777777776531 13799999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCChHHH----hhhceEEccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchh
Q 000774 967 ILIDGFDIAKFGLMDL----RKILGIIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQ 1038 (1293)
Q Consensus 967 I~i~g~~i~~~~~~~~----r~~i~~v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~ 1038 (1293)
|.++|.++...+...+ |++++|+||++.+|.. |+++|+.+.. .....+.. ..+.+.++. .|++..
T Consensus 85 I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~-----~~~~e~L~~--~gL~~~ 157 (400)
T PRK10070 85 VLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERR-----EKALDALRQ--VGLENY 157 (400)
T ss_pred EEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHH--cCCChh
Confidence 9999999988776554 3579999999999965 9999997421 11111111 112233333 245455
Q ss_pred hhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEE
Q 000774 1039 VSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILL 1115 (1293)
Q Consensus 1039 ~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~v 1115 (1293)
......+||||||||++|||||+.+|+||||||||++||+.+++.+++.|+++. .++|+|+|||+++++.. ||+|++
T Consensus 158 ~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 158 AHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred hhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEE
Confidence 556667899999999999999999999999999999999999999999999864 37899999999999866 999999
Q ss_pred EeCCeEeeecChhhhhhcCCChH
Q 000774 1116 LDSGRVLEYDTPEELLSNEGSSF 1138 (1293)
Q Consensus 1116 l~~G~i~~~g~~~el~~~~~~~~ 1138 (1293)
|++|++++.|+++++...+...|
T Consensus 238 L~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 238 MQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred EECCEEEecCCHHHHHhCcccHH
Confidence 99999999999999986554434
No 213
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-40 Score=362.43 Aligned_cols=202 Identities=27% Similarity=0.446 Sum_probs=172.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++. ++++|+||++++| ++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..+++.++|
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 4789999999653 6999999999999 99999999999999999999999999999999999987765 667889999
Q ss_pred Eccccccccc-cHhhhcCCCC---CCC----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~---~~~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||++.+|.. |+++|+.+.. ... ++++.++++..++. ........+||||||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLG-----------DRAKKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCH-----------HHHhCchhhCCHHHHHHHHHHHHH
Confidence 9999998876 9999986421 111 12233344444433 333445578999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998767999999999999876 9999999999998765
No 214
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-40 Score=375.77 Aligned_cols=217 Identities=29% Similarity=0.397 Sum_probs=179.1
Q ss_pred EEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH----hhh
Q 000774 910 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL----RKI 985 (1293)
Q Consensus 910 ~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~----r~~ 985 (1293)
.++|+++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQT--VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCCc--eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 567888888754 69999999999999999999999999999999999999999999999999987665443 357
Q ss_pred ceEEcccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 986 LGIIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 986 i~~v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
++|+||++.+|. .|+++|+.+.. .....+.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral~ 176 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARALA 176 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHHh
Confidence 999999999885 59999986421 11111111 1122333332 4444455556789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCC
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 1135 (1293)
++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+...
T Consensus 177 ~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 253 (269)
T cd03294 177 VDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPA 253 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcC
Confidence 99999999999999999999999999998743 7899999999999866 99999999999999999999986543
No 215
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-40 Score=370.18 Aligned_cols=218 Identities=24% Similarity=0.394 Sum_probs=182.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC--C---CcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~--p---~~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++|+++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ | ++|+|.++|.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQH--HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECCe--eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 48999999999753 69999999999999999999999999999999999997 3 59999999999863 3445
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC----CCHHH----HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE----HSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~----~~~~~----~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.++|+||++.+|..|+++|+.+... ..+++ +.++++..++.+. +.......+.+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDE-------VKDRLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhhhhhCCcccCCHHHHH
Confidence 67889999999999998899999964321 11111 2222333332221 123345667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|+||||||||++||+.+...+.+.|++...++|+|+|||+++.+.. |||+++|++|++++.|+++++.
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998667999999999999876 9999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
++.
T Consensus 243 ~~~ 245 (259)
T PRK14274 243 SNP 245 (259)
T ss_pred hCC
Confidence 643
No 216
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-40 Score=360.25 Aligned_cols=204 Identities=29% Similarity=0.522 Sum_probs=179.9
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCce-------------eecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASA-------------VIRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~-------------~~~~~ 350 (1293)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|.+. .++++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 58999999999753 6899999999999999999999999999999999999999998531 13567
Q ss_pred EEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
||||+|+| ++|..||.|.++||.. .+. +++.++++.+++.+..+..| .+|||||||||||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHh
Confidence 99999999 6789999999999943 232 45677888999988866655 5899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|.+|+.+|++||||||||+||+...+.+.+.+.+...+ |+|+|++|||++.+.. |||+++|++|+++.+|+++++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999877665555 6899999999999876 999999999999999999888765
Q ss_pred c
Q 000774 500 G 500 (1293)
Q Consensus 500 ~ 500 (1293)
.
T Consensus 230 ~ 230 (235)
T COG1122 230 A 230 (235)
T ss_pred h
Confidence 3
No 217
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-40 Score=367.32 Aligned_cols=215 Identities=26% Similarity=0.437 Sum_probs=184.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH-Hhhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~-~r~~i~ 987 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++.. .|+.++
T Consensus 4 l~~~~l~~~~~~~--~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 4 LTAKNLAKAYKGR--RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred EEEeCcEEEeCCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 8899999999753 6999999999999999999999999999999999999999999999999998777644 467899
Q ss_pred EEccccccccc-cHhhhcCCCCCC----CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~~----~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+||++.+|.. |+++|+...... +.++ ....+.++++.+ |++.........||||||||++||||++.
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 154 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQ-----REDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALAA 154 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhcccccCHHH-----HHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHhc
Confidence 99999998875 999999753211 1111 112334555554 56566667778899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 155 NPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999998865 47899999999988866 99999999999999999999864
No 218
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-40 Score=371.15 Aligned_cols=218 Identities=28% Similarity=0.418 Sum_probs=181.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCCC--hH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFG--LM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~~--~~ 980 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 12 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGEK--QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCCe--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 49999999999743 699999999999999999999999999999999999985 7999999999986432 34
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CCCHH----HHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~~~~----~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
.+|+.++|+||++.+|..|+++|+.+.. ....+ .+.++++.+++.+ .+..........||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWD-------ETSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCChhhCCHHHHHH
Confidence 5678899999999999899999996421 11221 1233333333211 11233455677899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987667999999999999876 99999999999999999999975
Q ss_pred cC
Q 000774 1133 NE 1134 (1293)
Q Consensus 1133 ~~ 1134 (1293)
..
T Consensus 243 ~~ 244 (258)
T PRK14268 243 NP 244 (258)
T ss_pred CC
Confidence 43
No 219
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=373.01 Aligned_cols=212 Identities=25% Similarity=0.382 Sum_probs=181.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPGR--TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECCE--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 48999999999643 6999999999999999999999999999999999999999999999999998878788888999
Q ss_pred EEccccccccc-cHhhhcCCCCC--------C---CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE--------H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~--------~---~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
|+||++.++.. |+.+|+.+... . .++++.++++.++ ++........+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVG-----------LKPLAHRLVDSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcC-----------CHHHhcCCcccCCHHHHHHHH
Confidence 99999877655 99999964211 0 1122333444433 333444455689999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999999999999999999999999999999998742 7899999999999866 99999999999999999988864
No 220
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.2e-39 Score=366.53 Aligned_cols=216 Identities=27% Similarity=0.461 Sum_probs=182.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC--------hH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--------LM 980 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~--------~~ 980 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..
T Consensus 4 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 4 IEVKNLVKKFHGQ--TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred EEEeceEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 8999999999743 6999999999999999999999999999999999999999999999999986532 24
Q ss_pred HHhhhceEEcccccccc-ccHhhhcCCC----CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 981 DLRKILGIIPQSPVLFS-GTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~-~ti~~nl~~~----~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
.+|+.++|+||++.+|. .|+++|+.+. .....++.. ..+.+.++.+ |++...+..+.+||||||||++
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv~ 154 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEAT-----ARARELLAKV--GLAGKETSYPRRLSGGQQQRVA 154 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCcchhhCChhhCChHHHHHHH
Confidence 56788999999999886 5999998642 111111111 1123444443 5555566677899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|||||+.+|++|||||||++||+.+++.+.+.|+++.. ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 155 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 234 (250)
T PRK11264 155 IARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFAD 234 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999998754 7899999999999876 999999999999999999998754
No 221
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.2e-40 Score=381.18 Aligned_cols=226 Identities=23% Similarity=0.388 Sum_probs=186.1
Q ss_pred cEEEEEEEEEecCC-----------CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC
Q 000774 908 SIKFEDVVLRYRPE-----------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 976 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~-----------~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~ 976 (1293)
.++++|++++|+.. ..++++||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 48999999999631 2358999999999999999999999999999999999999999999999999988
Q ss_pred CChHH---HhhhceEEcccc--cccc-ccHhhhcCC----CC-CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCC
Q 000774 977 FGLMD---LRKILGIIPQSP--VLFS-GTVRFNLDP----FS-EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGE 1044 (1293)
Q Consensus 977 ~~~~~---~r~~i~~v~Q~~--~lf~-~ti~~nl~~----~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~ 1044 (1293)
.+... +|++|+||||+| .++. .|+.+|+.. +. ..+.++..+. +.+.++.+ |++ ......+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHc--CCChHHhcCCcc
Confidence 77544 567899999998 4674 599999852 11 1232222211 12333332 332 23466678
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeE
Q 000774 1045 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRV 1121 (1293)
Q Consensus 1045 ~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 1121 (1293)
+||||||||++|||||+.+|++||+||||++||+.+...+.+.|+++.+ +.|+|+||||++.+.. ||||++|.+|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999998753 7899999999999987 999999999999
Q ss_pred eeecChhhhhhcCCChHHH
Q 000774 1122 LEYDTPEELLSNEGSSFSK 1140 (1293)
Q Consensus 1122 ~~~g~~~el~~~~~~~~~~ 1140 (1293)
++.|+++++.++....|.+
T Consensus 241 ve~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EEEcCHHHHHcCCCCHHHH
Confidence 9999999998765445554
No 222
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-40 Score=372.08 Aligned_cols=216 Identities=28% Similarity=0.519 Sum_probs=182.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC-hHHHhhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG-LMDLRKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~-~~~~r~~i~ 987 (1293)
++++|++++|+++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 35999999999999999999999999999999999999999999999999997765 356788899
Q ss_pred EEccccc--cccccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSPV--LFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~~--lf~~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+||+|. +++.|+++|+.+... .+..+..+ .+.+.++. .|++...+..+..||||||||++|||||+.
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~--~gl~~~~~~~~~~LS~G~~qrv~laral~~ 153 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAE--IGLEKYRHRSPKTLSGGQGQCVALAGILTM 153 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHH--CCCHHHhcCCcccCCHHHHHHHHHHHHHHc
Confidence 9999985 566799999975321 11111111 12233333 255555666678899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+|+||||||||++||+.+...+++.|+++. .++|+|++||+++.+..||||++|++|++++.|+++++..
T Consensus 154 ~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 154 EPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999998865 4789999999999997799999999999999999999864
No 223
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.8e-40 Score=357.22 Aligned_cols=199 Identities=28% Similarity=0.423 Sum_probs=180.0
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhh
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~ 985 (1293)
++++||+++|++.. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 47899999997542 3699999999999999999999999999999999999999999999998 6
Q ss_pred ceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 986 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 986 i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
|+|+||+|.+|+.|+++|+.+.....+++..++++.+++.+++..+|.|+++.+...+.+||||||||++|||||+.+|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998654445556777888888999999999999999998999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHH-HHHHHc-CCcEEEEEecCcchhhccCEEEEEeCCe
Q 000774 1066 ILVLDEATAAVDVRTDALIQK-TIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGR 1120 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~-~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~ 1120 (1293)
++||||||++||+++.+.+.+ .+++.. .++|||++||+++.+..||++++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999998887 466554 3689999999999988899999999985
No 224
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.5e-40 Score=349.88 Aligned_cols=178 Identities=33% Similarity=0.574 Sum_probs=164.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|+...+++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|+.++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 478999999975433699999999999999999999999999999999999999999999999988665 5667888999
Q ss_pred EccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000774 989 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1068 (1293)
Q Consensus 989 v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLl 1068 (1293)
+||++.+|+.|+++|+ ..+||||||||++||||++.+|++||
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999988999886 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeec
Q 000774 1069 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1069 LDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g 1125 (1293)
|||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999886789999999999999889999999999998764
No 225
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-40 Score=372.16 Aligned_cols=218 Identities=27% Similarity=0.462 Sum_probs=184.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 48999999999643346999999999999999999999999999999999999999999999999998777778888999
Q ss_pred EEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+||++ .++..|+++|+.+.. ....++..+ .+.+.++.+ |++...+....+||||||||++|||||+.
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~~ 159 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLAL 159 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 999998 345679999996421 122222111 123333332 45555566678899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++.+
T Consensus 160 ~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 160 NPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999998753 489999999999987799999999999999999988864
No 226
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.8e-40 Score=365.97 Aligned_cols=216 Identities=26% Similarity=0.438 Sum_probs=183.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC--hHHHhhhc
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLRKIL 986 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~--~~~~r~~i 986 (1293)
++++|++++|++. ++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~~--~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGPT--QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 7899999999743 6999999999999999999999999999999999999999999999999987643 34667889
Q ss_pred eEEcccccccc-ccHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 987 GIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 987 ~~v~Q~~~lf~-~ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
+|+||++.+|. .|+++|+.+.. .....+.. ..+.+.++.+ |++...+.....||||||||++||||++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAE-----KQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARALA 152 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHHh
Confidence 99999998886 59999996421 11111111 1233444443 5666667777889999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999999865 47999999999999876 999999999999999999998753
No 227
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-40 Score=373.76 Aligned_cols=214 Identities=27% Similarity=0.447 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCc---ceEEECCeecCCCChHHHhh
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER---GRILIDGFDIAKFGLMDLRK 984 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~---G~I~i~g~~i~~~~~~~~r~ 984 (1293)
.|+++|++++|++...++++|+||+|++||++||+||||||||||+++|+|+++|++ |+|.++|.++...+...+++
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~ 84 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIRE 84 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHh
Confidence 589999999996533369999999999999999999999999999999999999998 89999999998777777888
Q ss_pred hceEEccccc--cccccHhhhcCCCC---CCCHHH----HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 985 ILGIIPQSPV--LFSGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 985 ~i~~v~Q~~~--lf~~ti~~nl~~~~---~~~~~~----~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+|||+||++. ++..|+.+|+.+.. ..+.++ +.++++.+ |++...+....+||||||||++
T Consensus 85 ~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~LS~G~~qrv~ 153 (282)
T PRK13640 85 KVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADV-----------GMLDYIDSEPANLSGGQKQRVA 153 (282)
T ss_pred heEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC-----------CChhHhcCCcccCCHHHHHHHH
Confidence 9999999983 55779999997421 122222 33333333 4444555566789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.. ++|||++||+++.+..|||+++|++|++++.|+++++..
T Consensus 154 laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 154 IAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 789999999999997799999999999999999999875
No 228
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.6e-40 Score=368.68 Aligned_cols=217 Identities=29% Similarity=0.495 Sum_probs=182.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC----------
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---------- 978 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~---------- 978 (1293)
|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGIL--TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCCe--eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 4789999999743 6999999999999999999999999999999999999999999999999986543
Q ss_pred ---hHHHhhhceEEcccccccc-ccHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhH
Q 000774 979 ---LMDLRKILGIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 1050 (1293)
Q Consensus 979 ---~~~~r~~i~~v~Q~~~lf~-~ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGq 1050 (1293)
...+|+.++|+||++.+|. .|+.+|+.... .....+.. ..+.+.++.+ |++...+..+..|||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~ 151 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGGQ 151 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHHH
Confidence 2356788999999999885 69999996421 11111111 1233444443 55555666678899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecCh
Q 000774 1051 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1127 (1293)
Q Consensus 1051 kqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 1127 (1293)
|||++|||||+.+|++|||||||++||+.++..+.+.|++..+ +.|+|+|||+++.+.. |||+++|++|++++.|++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 231 (252)
T TIGR03005 152 QQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKP 231 (252)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999998653 7899999999999865 999999999999999999
Q ss_pred hhhhhcC
Q 000774 1128 EELLSNE 1134 (1293)
Q Consensus 1128 ~el~~~~ 1134 (1293)
+++.+..
T Consensus 232 ~~~~~~~ 238 (252)
T TIGR03005 232 DEIFRQP 238 (252)
T ss_pred HHHhcCC
Confidence 9987543
No 229
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.5e-40 Score=362.20 Aligned_cols=207 Identities=27% Similarity=0.413 Sum_probs=172.8
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---Hh
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~r 983 (1293)
++++||+++|++.. .++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 35999999999999999999999999999999999999999999999999998776544 33
Q ss_pred -hhceEEcccccccc-ccHhhhcCCC---CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 984 -KILGIIPQSPVLFS-GTVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 984 -~~i~~v~Q~~~lf~-~ti~~nl~~~---~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
+.++|+||++.+|. .|+++|+.+. ......+.. ..+.++++.+ |++.........||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK-----ERAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999886 4999998642 111111111 1123444442 5555566667889999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhccCEEEEEeCCeEe
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVL 1122 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~ 1122 (1293)
||+.+|+||||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+..||+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999875 378999999999999889999999999985
No 230
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-40 Score=384.94 Aligned_cols=220 Identities=22% Similarity=0.395 Sum_probs=184.7
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++...++ .++.||
T Consensus 19 ~l~l~~v~~~~~~~--~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ig 94 (377)
T PRK11607 19 LLEIRNLTKSFDGQ--HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPIN 94 (377)
T ss_pred eEEEEeEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCEE
Confidence 59999999999753 69999999999999999999999999999999999999999999999999987664 467899
Q ss_pred EEccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
||||++.+|.. |+.||+.+.. .....+..+ .+.+.++.+ ++.........+||||||||++|||||+.+
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~~~ 167 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLAKR 167 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 9999997532 112222111 122333332 444455566678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChH
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSF 1138 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~ 1138 (1293)
|++|||||||++||+.+++.+.+.|+++. .+.|+|+||||++++.. ||||++|++|++++.|+++|+..++...|
T Consensus 168 P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~ 245 (377)
T PRK11607 168 PKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 245 (377)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHH
Confidence 99999999999999999999998887764 36899999999999766 99999999999999999999987654433
No 231
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1e-39 Score=368.19 Aligned_cols=218 Identities=26% Similarity=0.397 Sum_probs=182.0
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC---------
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF--------- 977 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~--------- 977 (1293)
+.++++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 4 NKLNVIDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred ccEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 459999999999753 699999999999999999999999999999999999999999999999988542
Q ss_pred ----ChHHHhhhceEEccccccccc-cHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhh-hcCCCCCC
Q 000774 978 ----GLMDLRKILGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQV-SEAGENFS 1047 (1293)
Q Consensus 978 ----~~~~~r~~i~~v~Q~~~lf~~-ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~-~~~~~~LS 1047 (1293)
....+++.++|+||++.+|.. |+++|+.+.. .....+. ...+.++++.+ |+.... +.....||
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LS 154 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEA-----RERAVKYLAKV--GIDERAQGKYPVHLS 154 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHHc--CCChhhhhCCcccCC
Confidence 124567889999999999975 9999986321 1111111 11123344443 444433 55677899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1048 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1048 gGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~ 234 (257)
T PRK10619 155 GGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEG 234 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999875 47999999999999987 9999999999999999
Q ss_pred Chhhhhhc
Q 000774 1126 TPEELLSN 1133 (1293)
Q Consensus 1126 ~~~el~~~ 1133 (1293)
+++++.+.
T Consensus 235 ~~~~~~~~ 242 (257)
T PRK10619 235 APEQLFGN 242 (257)
T ss_pred CHHHhhhC
Confidence 99998754
No 232
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-40 Score=374.31 Aligned_cols=217 Identities=26% Similarity=0.446 Sum_probs=181.6
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC----ChHH
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~----~~~~ 981 (1293)
|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13641 3 IKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKK 82 (287)
T ss_pred EEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997421 3599999999999999999999999999999999999999999999999998643 2455
Q ss_pred HhhhceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 000774 982 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 982 ~r~~i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~ 1055 (1293)
.++.|+|+||+| .+|..|+++|+.+.. ....++.. ..+.++++.+ |++ ........+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl~ 155 (287)
T PRK13641 83 LRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAK-----EKALKWLKKV--GLSEDLISKSPFELSGGQMRRVA 155 (287)
T ss_pred HHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCChhHhhCCcccCCHHHHHHHH
Confidence 677899999998 577789999996321 11222211 1123444443 564 3456677889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|++|||||||++||+.+.+.+.+.|+++. .+.|||++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 156 IAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999875 47899999999999876 99999999999999999999874
No 233
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-40 Score=364.72 Aligned_cols=217 Identities=28% Similarity=0.411 Sum_probs=180.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH-Hhhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~-~r~~i 986 (1293)
.++++|++++|++. ++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGKI--QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCCc--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 38999999999643 6999999999999999999999999999999999999999999999999998877654 57789
Q ss_pred eEEccccccccc-cHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+|+||++.+|.. |+++|+..... ....+..+. +.+.++.++ +++.........||||||||++||||++.+|
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQP 156 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999999999975 99999964211 111111111 122222221 1223334456789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++++.. |||+++|++|++++.|+++++..
T Consensus 157 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 157 RLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999999999865 47999999999998766 99999999999999999999864
No 234
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-40 Score=367.12 Aligned_cols=218 Identities=29% Similarity=0.444 Sum_probs=182.1
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCC--CCh
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGL 979 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~--~~~ 979 (1293)
+.|+++||+++|++. ++++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGDF--QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 358999999999753 699999999999999999999999999999999999863 69999999999864 345
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCC---CC-C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1051 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqk 1051 (1293)
..+|+.++|+||++.+|..|+++|+.+.. .. . ++.+.++++.+++.+ ++....+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHHH
Confidence 56788999999999998899999996421 11 1 122233333333221 122344566788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1052 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1052 qrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
||++|||||+.+|++|||||||++||+.+++.+.+.|++..+++|+|++||+++.+.. |||+++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999998876 999999999999999999998
Q ss_pred hhc
Q 000774 1131 LSN 1133 (1293)
Q Consensus 1131 ~~~ 1133 (1293)
...
T Consensus 233 ~~~ 235 (250)
T PRK14240 233 FTN 235 (250)
T ss_pred HhC
Confidence 754
No 235
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5.1e-40 Score=360.34 Aligned_cols=206 Identities=21% Similarity=0.372 Sum_probs=172.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 4789999999753 699999999999999999999999999999999999999999999999998765542 467999
Q ss_pred Ecccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|. .|+++|+.+.. ....++..+ .+.+.++.+ |++........+||||||||++|||||+.+|
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~p 149 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVREP 149 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999885 59999986431 111111111 122333332 4555556667789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 150 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 150 KVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999998753 7899999999999877 9999999999999876
No 236
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-40 Score=368.30 Aligned_cols=218 Identities=28% Similarity=0.416 Sum_probs=181.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcC---CCC--CcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI---VEL--ERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~---~~p--~~G~I~i~g~~i~~~--~~~ 980 (1293)
.++++|+++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+ ++| ++|+|.++|.++... +..
T Consensus 3 ~l~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGDF--HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECCE--eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 48999999999753 699999999999999999999999999999999997 454 589999999998753 345
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.++|+||++.+|..|+++|+.+.. .. .. +.+.++++.+++.+ .+.+...+.+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWD-------EVKDKLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCc-------chhhhhhCCcccCCHHHHH
Confidence 6788899999999999889999986421 11 11 12233333333221 1223455667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998678999999999999866 9999999999999999999998
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
+..
T Consensus 234 ~~~ 236 (250)
T PRK14245 234 TNP 236 (250)
T ss_pred cCC
Confidence 643
No 237
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-40 Score=373.49 Aligned_cols=217 Identities=22% Similarity=0.370 Sum_probs=182.0
Q ss_pred EEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC----ChHH
Q 000774 909 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~----~~~~ 981 (1293)
++++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 3599999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhhhceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 000774 982 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 982 ~r~~i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+|+.|+|+||++ .+|+.|+++|+.+.. ..+.++..+ .+.++++. .|++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEA-----LAREKLAL--VGISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHH--cCCChhhhhCCcccCCHHHHHHHH
Confidence 788899999998 577889999996421 112222211 12333443 2554 2456677889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998754 7899999999999876 99999999999999999999865
No 238
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-40 Score=363.76 Aligned_cols=208 Identities=24% Similarity=0.349 Sum_probs=172.0
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
++++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 46899999997411 369999999999999999999999999999999999999999999999998863 36789
Q ss_pred eEEcccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 987 GIIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 987 ~~v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+|+||++.+|. .|+++|+.+.. .....+. ...+.+.++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEA-----RERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999887 59999986421 1111111 11123334432 44445555667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEe--CCeEeeecChh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD--SGRVLEYDTPE 1128 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~--~G~i~~~g~~~ 1128 (1293)
+|++|||||||++||+.+.+.+++.|++.. .++|+|+|||+++++.. ||++++|+ +|++++.++.+
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 999999999999999999999999999864 37899999999998866 99999999 79999988754
No 239
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=370.00 Aligned_cols=217 Identities=25% Similarity=0.462 Sum_probs=180.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~~--~~~ 980 (1293)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++... +..
T Consensus 21 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGEK--RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCCc--eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 48999999999743 69999999999999999999999999999999999865 7899999999998643 344
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.++++++|+||++.+|..|+++|+.+.. .. .. +.+.++++..++.+ .+....+..+.+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWD-------EVKDRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCc-------chHHHHhcCcccCCHHHHH
Confidence 5678899999999999889999986421 11 11 11223333322211 1123445667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667899999999998876 9999999999999999999987
Q ss_pred hc
Q 000774 1132 SN 1133 (1293)
Q Consensus 1132 ~~ 1133 (1293)
+.
T Consensus 252 ~~ 253 (268)
T PRK14248 252 TS 253 (268)
T ss_pred hC
Confidence 54
No 240
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.3e-39 Score=368.63 Aligned_cols=218 Identities=27% Similarity=0.457 Sum_probs=180.6
Q ss_pred EEEEEEEEEecCC-------CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH
Q 000774 909 IKFEDVVLRYRPE-------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~-------~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
|+++||++.|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 246999999999999999999999999999999999999999999999999998766543
Q ss_pred ---HhhhceEEccccc--ccc-ccHhhhcCCC----CCCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhH
Q 000774 982 ---LRKILGIIPQSPV--LFS-GTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 1050 (1293)
Q Consensus 982 ---~r~~i~~v~Q~~~--lf~-~ti~~nl~~~----~~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGq 1050 (1293)
+|+.|+|+||++. ++. .|+++|+.+. ......+ ....+.+.++.+ |++ ...+..+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 5778999999983 443 5999998421 1111111 111233444443 453 34556678899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecCh
Q 000774 1051 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1127 (1293)
Q Consensus 1051 kqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 1127 (1293)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||+|||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998753 7899999999999976 999999999999999999
Q ss_pred hhhhhc
Q 000774 1128 EELLSN 1133 (1293)
Q Consensus 1128 ~el~~~ 1133 (1293)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 999864
No 241
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.9e-40 Score=359.94 Aligned_cols=204 Identities=27% Similarity=0.469 Sum_probs=170.3
Q ss_pred EEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEE
Q 000774 910 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 989 (1293)
Q Consensus 910 ~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 989 (1293)
+++|++++|++...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...++++|+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36899999975223699999999999999999999999999999999999999999999999999877777888899999
Q ss_pred ccccc--cccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 990 PQSPV--LFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 990 ~Q~~~--lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
||++. ++..|+++|+.+.. .....+..+ .+.++++.+ |++.........||||||||++|||||+.+|
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~p 153 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMDP 153 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99984 56779999986421 111111111 122333332 4444555667789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCe
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGR 1120 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~ 1120 (1293)
++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 154 ~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 154 DILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998754 7899999999999987 99999999985
No 242
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.6e-40 Score=365.04 Aligned_cols=212 Identities=27% Similarity=0.432 Sum_probs=178.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH-Hhhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~-~r~~i~ 987 (1293)
|+++||++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 4789999999753 6999999999999999999999999999999999999999999999999998777654 366799
Q ss_pred EEccccccccc-cHhhhcCCCCC-C--CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE-H--SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~-~--~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
|+||++.+|.. |+++|+.+... . ...+. ..+.++.+ .+++........+||||||||++|||||+++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~--------~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 149 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKI--------PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTR 149 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHH--------HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 99999864211 1 11111 11222221 1233445566778999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||||++||+.+.+.+++.|.+..+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++.
T Consensus 150 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 150 PKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 999999999999999999999999998754 6899999999999986 9999999999999999998873
No 243
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.6e-40 Score=378.76 Aligned_cols=207 Identities=26% Similarity=0.449 Sum_probs=174.5
Q ss_pred EecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccc
Q 000774 917 RYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF 996 (1293)
Q Consensus 917 ~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf 996 (1293)
+|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+..+|+++||+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 5654 369999999999999999999999999999999999999999999999999876 4456788999999999998
Q ss_pred cc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCC
Q 000774 997 SG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEA 1072 (1293)
Q Consensus 997 ~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEp 1072 (1293)
.. |+++|+.++.. ....+.. ..+.+.++.+ |+.........+||||||||++|||||+++|++||||||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEP 151 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAE-----ERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEP 151 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 76 99999964321 1111111 1123344443 444455566778999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1073 TAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1073 Ts~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|+|||+.+.+.+++.|+++. .++|||++||+++++.. ||+|++|++|++++.|+++++.++
T Consensus 152 t~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 152 TTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999999999875 47899999999999977 999999999999999999998754
No 244
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-40 Score=367.64 Aligned_cols=218 Identities=24% Similarity=0.397 Sum_probs=181.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCC--CC---CcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--EL---ERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~--~p---~~G~I~i~g~~i~~~--~~~ 980 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|++ .| ++|+|.++|.++... +..
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNKK--KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECCe--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 38999999999743 6999999999999999999999999999999999995 46 499999999998643 344
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.++|+||++.+|+.|+++|+.+.. .. .+ +++.++++.+++.+ ++.+..+....+|||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWD-------EVKDRLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCch-------hHHHHHhcCcccCCHHHHH
Confidence 6788899999999999899999986321 11 11 12223333333221 1223456677889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999998866 9999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
+.+
T Consensus 236 ~~~ 238 (252)
T PRK14239 236 MNP 238 (252)
T ss_pred hCC
Confidence 643
No 245
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=366.06 Aligned_cols=211 Identities=28% Similarity=0.428 Sum_probs=181.4
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|+++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 3 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGGR--TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999999988777777889999
Q ss_pred Ecccccc-ccccHhhhcCCCCCC---C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVL-FSGTVRFNLDPFSEH---S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~l-f~~ti~~nl~~~~~~---~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||++.+ +..|+++|+.+.... . ++.+.++++.. |++...+....+||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQV-----------DLAHLAGRDYPQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHc-----------CCHhHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999987 566999998643211 1 11223333333 444445556778999999999999999
Q ss_pred c------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1061 L------RRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1061 l------~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
+ .+|++|||||||++||+.+.+.+.+.|+++. .++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9 5999999999999999999999999999875 47899999999999876 9999999999999999999886
Q ss_pred h
Q 000774 1132 S 1132 (1293)
Q Consensus 1132 ~ 1132 (1293)
.
T Consensus 230 ~ 230 (258)
T PRK13548 230 T 230 (258)
T ss_pred C
Confidence 4
No 246
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.3e-39 Score=361.14 Aligned_cols=221 Identities=30% Similarity=0.491 Sum_probs=192.5
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 352 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i~ 352 (1293)
|+++|++++|+. .++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.... .++.++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKP-DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCC-CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 478999999963 2467999999999999999999999999999999999999999984321 134599
Q ss_pred EEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 353 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 353 ~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
|++|++++|+.||.||+.++.. ....++.+.++..++.+.++.+|.+..+.++..+.+|||||||||+|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999988643 334455666777888888888988888888889999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHH
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLM 507 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 507 (1293)
+||||||++||+.+.+.+.+.+.+. .+|+|+|++||+++++..||++++|++|++++.|+++++.+..+.|+.+.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDI-CAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHH
Confidence 9999999999999999998866554 35899999999999998899999999999999999999988777776644
No 247
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-40 Score=368.13 Aligned_cols=211 Identities=26% Similarity=0.447 Sum_probs=182.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 3 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGTK--RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECCE--EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999999887777778888999
Q ss_pred Eccccccccc-cHhhhcCCCCC--------CC---HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE--------HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1056 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~--------~~---~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~l 1056 (1293)
+||++.++.+ |+.+|+.+... .. ++.+.++++.. |++.........||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT-----------RINHLADRRLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc-----------CCHHHHcCCcccCCHHHHHHHHH
Confidence 9999988876 99999875311 01 11223333333 44444556677899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1057 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1057 Arall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||++.+|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999999865 47899999999999876 99999999999999999988863
No 248
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.3e-40 Score=363.64 Aligned_cols=211 Identities=25% Similarity=0.406 Sum_probs=173.3
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh---HHHh
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~---~~~r 983 (1293)
|+++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 259999999999999999999999999999999999999999999999999987663 4677
Q ss_pred hhceEEcccc--ccc-cccHhhhcCCC----CCCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 000774 984 KILGIIPQSP--VLF-SGTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 984 ~~i~~v~Q~~--~lf-~~ti~~nl~~~----~~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+.++|+||++ .++ ..|+++|+.+. ....+++..+ . ...+.++.+ ++. ...+....+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~---~-~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARK---E-AVLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHH---H-HHHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8899999999 344 45999998531 1111111111 0 012334443 453 4556777889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
|||||+.+|++|||||||++||+.+++.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998754 7899999999999885 9999999999998764
No 249
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=364.72 Aligned_cols=215 Identities=25% Similarity=0.366 Sum_probs=181.2
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC------CChHHH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK------FGLMDL 982 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~------~~~~~~ 982 (1293)
++++|++++|++. ++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+....
T Consensus 3 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGAH--QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECCe--eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 7899999999753 69999999999999999999999999999999999999999999999998731 223456
Q ss_pred hhhceEEccccccccc-cHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 983 RKILGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 983 r~~i~~v~Q~~~lf~~-ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
|++|+|+||++.+|.. |+++|+.... .....+.. ..+.++++.+ |++...+....+||||||||++||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la 153 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAIA 153 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHH
Confidence 7889999999999875 9999985311 11111111 1234444443 566666677789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
||++.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 154 ral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 154 RALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999999999999999999998753 7999999999999876 99999999999999999988754
No 250
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=376.72 Aligned_cols=227 Identities=26% Similarity=0.387 Sum_probs=184.7
Q ss_pred cEEEEEEEEEecCC--------CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh
Q 000774 908 SIKFEDVVLRYRPE--------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL 979 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~--------~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~ 979 (1293)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 38999999999631 2368999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhhhceEEccccc--cccc-cHhhhcCC----CCCCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCCh
Q 000774 980 M---DLRKILGIIPQSPV--LFSG-TVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSV 1048 (1293)
Q Consensus 980 ~---~~r~~i~~v~Q~~~--lf~~-ti~~nl~~----~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSg 1048 (1293)
. .+|++|+||||+|. ++.. |+.+|+.. .......+. ...+.++++.+ |++ ......+..|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 4 45778999999993 5543 88888741 111121111 11223344432 333 234556778999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1049 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1049 Gqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
|||||++|||||+.+|++||+||||++||+.+.+.+.+.|+++.+ +.|+|+||||++.+.. ||||++|++|+|++.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999998653 7899999999999976 9999999999999999
Q ss_pred ChhhhhhcCCChHHHH
Q 000774 1126 TPEELLSNEGSSFSKM 1141 (1293)
Q Consensus 1126 ~~~el~~~~~~~~~~l 1141 (1293)
+++++.++....|.+.
T Consensus 238 ~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 238 TKEQIFNNPRHPYTQA 253 (327)
T ss_pred CHHHHhcCCCCHHHHH
Confidence 9999987655556543
No 251
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=369.51 Aligned_cols=212 Identities=23% Similarity=0.382 Sum_probs=182.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++||+++|++. .+|+|+||++.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 7 ~l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 7 RLRGEQLTLGYGKY--TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred EEEEEEEEEEECCE--EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 59999999999753 6999999999999999999999999999999999999999999999999998888788888999
Q ss_pred EEcccccccc-ccHhhhcCCCC--C------CCH---HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 988 IIPQSPVLFS-GTVRFNLDPFS--E------HSD---ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 988 ~v~Q~~~lf~-~ti~~nl~~~~--~------~~~---~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
|+||++.+|. .|+++|+.+.. . ..+ +.+.++++.. |++......+.+||||||||++
T Consensus 85 ~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Gq~qrv~ 153 (265)
T PRK10253 85 LLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQAT-----------GITHLADQSVDTLSGGQRQRAW 153 (265)
T ss_pred EeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc-----------CCHHHhcCCcccCChHHHHHHH
Confidence 9999998875 59999986431 1 011 1233333333 4444455667889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
||||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 154 laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 154 IAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999999999999999999998753 7899999999998876 99999999999999999998864
No 252
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=368.43 Aligned_cols=219 Identities=24% Similarity=0.447 Sum_probs=182.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 38999999999754335999999999999999999999999999999999999999999999999998877778889999
Q ss_pred EEccccc-cc-cccHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSPV-LF-SGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~~-lf-~~ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+||++. +| ..|+++|+.+... ...++..+ .+.+.++. .|+.......+.+||||||||++||||++.
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~laral~~ 159 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQ--VDMLERADYEPNALSGGQKQRVAIAGVLAL 159 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHH--cCCchhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 9999984 44 5589999864311 11111111 12222332 234444455677899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++...
T Consensus 160 ~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 160 NPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999998753 6899999999999878999999999999999999998753
No 253
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-40 Score=367.31 Aligned_cols=218 Identities=28% Similarity=0.417 Sum_probs=180.7
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGNY--EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 38999999999753 69999999999999999999999999999999999997 479999999999854 2344
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC---CC-H----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---HS-D----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~~-~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.++|+||++.+|+.|+++|+.+... .. . +++.++++..++.+ ......+..+.+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHHH
Confidence 56788999999999998899999964211 11 1 12222333322211 0112345567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667999999999999876 9999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
...
T Consensus 235 ~~~ 237 (251)
T PRK14251 235 IAP 237 (251)
T ss_pred hCC
Confidence 543
No 254
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=364.71 Aligned_cols=203 Identities=29% Similarity=0.408 Sum_probs=174.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++|++++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++. .+++.++
T Consensus 12 ~l~i~~l~~~~~~~--~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGER--TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 49999999999753 6999999999999999999999999999999999999999999999998763 4577899
Q ss_pred EEcccccccc-ccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 988 IIPQSPVLFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 988 ~v~Q~~~lf~-~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
|+||++.+|. .|+++|+.+... ..++++.++++.. |++......+.+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAV-----------GLADRANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHc-----------CChhHhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999887 599999975321 1123344444443 44444555667899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChh
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 1128 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~ 1128 (1293)
+|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999998864 37899999999999866 9999999999999988765
No 255
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=367.90 Aligned_cols=217 Identities=24% Similarity=0.431 Sum_probs=183.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .+..
T Consensus 20 ~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 20 ALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred EEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 5999999999964 369999999999999999999999999999999999997 589999999999864 2345
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.|+|+||++.+|..|+++|+.+.. .. .+ +++.++++..++.+. ++...+..+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~G~~q 170 (267)
T PRK14237 98 EMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQ-------VKDDLHKSALTLSGGQQQ 170 (267)
T ss_pred HHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCch-------hhhhhcCCcccCCHHHHH
Confidence 6788899999999999889999996421 11 11 223333444333222 123456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 171 RLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998667999999999999866 9999999999999999999997
Q ss_pred hc
Q 000774 1132 SN 1133 (1293)
Q Consensus 1132 ~~ 1133 (1293)
+.
T Consensus 251 ~~ 252 (267)
T PRK14237 251 TN 252 (267)
T ss_pred cC
Confidence 54
No 256
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.4e-39 Score=364.35 Aligned_cols=211 Identities=24% Similarity=0.362 Sum_probs=187.9
Q ss_pred CccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhh
Q 000774 906 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 985 (1293)
Q Consensus 906 ~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~ 985 (1293)
.+.|+++|+++. . .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++| .
T Consensus 37 ~~~l~i~nls~~--~--~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV--G--APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe--c--ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 345999999985 2 3699999999999999999999999999999999999999999999997 3
Q ss_pred ceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 986 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 986 i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
|+|+||++.+|+.|+++|+.+.....+.++.++++.+++.+.+..+|.++++.+.+.+.+||||||||++|||||+.+|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997643333445566777778888888899888888888889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHH-HHHcCCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTI-REEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l-~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+|||||||++||+.+.+.+.+.+ +....++|||++||+++.+..||++++|++|++++.|+++++.+.
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL 248 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999998754 555567999999999999878999999999999999999998753
No 257
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=365.36 Aligned_cols=219 Identities=21% Similarity=0.380 Sum_probs=182.1
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC--C---CcceEEECCeecCCC--Ch
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAKF--GL 979 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~--p---~~G~I~i~g~~i~~~--~~ 979 (1293)
+.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|.++... ..
T Consensus 3 ~~l~~~nl~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 80 (252)
T PRK14256 3 NKVKLEQLNVHFGKN--HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP 80 (252)
T ss_pred cEEEEEEEEEEeCCe--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh
Confidence 469999999999743 69999999999999999999999999999999999986 4 689999999998643 34
Q ss_pred HHHhhhceEEcccccccc-ccHhhhcCCCC---C-CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhH
Q 000774 980 MDLRKILGIIPQSPVLFS-GTVRFNLDPFS---E-HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 1050 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~-~ti~~nl~~~~---~-~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGq 1050 (1293)
..+|+.++|+||++.+|. .|+++|+.... . ... +.+.++++..++.+.+ .......+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (252)
T PRK14256 81 VSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-------KDRLKSNAMELSGGQ 153 (252)
T ss_pred HHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcCcCCHHH
Confidence 567888999999999887 59999996421 1 111 1233333333332211 123445677899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhh
Q 000774 1051 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1129 (1293)
Q Consensus 1051 kqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 1129 (1293)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|||++||+++.+.. |||+++|++|++++.|++++
T Consensus 154 ~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14256 154 QQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKK 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999866 99999999999999999999
Q ss_pred hhhcC
Q 000774 1130 LLSNE 1134 (1293)
Q Consensus 1130 l~~~~ 1134 (1293)
+....
T Consensus 234 ~~~~~ 238 (252)
T PRK14256 234 IFTTP 238 (252)
T ss_pred HHhCC
Confidence 87543
No 258
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=366.11 Aligned_cols=218 Identities=21% Similarity=0.400 Sum_probs=183.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .++.
T Consensus 10 ~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 48999999999753 69999999999999999999999999999999999986 479999999998853 3456
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC---CC---HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1054 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~~---~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl 1054 (1293)
.+|++++|+||++.+|+.|+.+|+.+... .. ++++.++++.+++.+.+. ......+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHHH
Confidence 67888999999999998899999964321 11 123334445544433322 234556778999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEe---------CCeEeee
Q 000774 1055 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD---------SGRVLEY 1124 (1293)
Q Consensus 1055 ~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~---------~G~i~~~ 1124 (1293)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|||++||+++.+.. ||||++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998777899999999999877 99999998 8999999
Q ss_pred cChhhhhhcC
Q 000774 1125 DTPEELLSNE 1134 (1293)
Q Consensus 1125 g~~~el~~~~ 1134 (1293)
|+++|+.+.+
T Consensus 241 ~~~~~~~~~~ 250 (264)
T PRK14243 241 DRTEKIFNSP 250 (264)
T ss_pred CCHHHHHhCC
Confidence 9999997643
No 259
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=370.65 Aligned_cols=215 Identities=27% Similarity=0.408 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCC-CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhc
Q 000774 908 SIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 986 (1293)
.++++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 38999999999742 23599999999999999999999999999999999999999999999999999877777788899
Q ss_pred eEEccccc--cccccHhhhcCCCC---CCCHHH----HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 987 GIIPQSPV--LFSGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 987 ~~v~Q~~~--lf~~ti~~nl~~~~---~~~~~~----~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
||+||++. ++..|+.+|+.+.. ...+++ +.++++.+ |+..........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAV-----------NMLDFKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHHHHHH
Confidence 99999983 56779999996421 122222 23333333 343344455678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhhhc
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998754 7899999999999878999999999999999999998753
No 260
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-40 Score=354.09 Aligned_cols=203 Identities=31% Similarity=0.455 Sum_probs=176.4
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.|.++|+++.|+ ..++++|||++|+.||.+|+.|||||||||||++|+|+..|+.|.+.. ..++
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 478899999996 467999999999999999999999999999999999999999984322 1236
Q ss_pred EEEEcCCcccc-CccHHHHHccCCCC---------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGSAF---------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~~~---------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
||+|+|+..+| ..||++||+||... ...++.+.++.++|...-+..| .+||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHHH
Confidence 99999999997 79999999999521 1345667788888888777777 489999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhh
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
|||||..+|++|+||||+++||++.++.+-..+.+...+ |.|+++||||.++.. .||||++|++|+|...|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 999999999999999999999999999888777665444 899999999998864 689999999999999999999876
Q ss_pred cc
Q 000774 499 NG 500 (1293)
Q Consensus 499 ~~ 500 (1293)
..
T Consensus 228 ~P 229 (345)
T COG1118 228 HP 229 (345)
T ss_pred CC
Confidence 64
No 261
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=376.58 Aligned_cols=225 Identities=20% Similarity=0.379 Sum_probs=182.0
Q ss_pred EEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC----CCcceEEECCeecCCCChHHH
Q 000774 909 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE----LERGRILIDGFDIAKFGLMDL 982 (1293)
Q Consensus 909 i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~----p~~G~I~i~g~~i~~~~~~~~ 982 (1293)
++++|+++.|+... ..+|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++..++...+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 79999999997532 259999999999999999999999999999999999998 489999999999988887665
Q ss_pred hh----hceEEccccc--ccc-ccHhhhcC----CCCCCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCC
Q 000774 983 RK----ILGIIPQSPV--LFS-GTVRFNLD----PFSEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1047 (1293)
Q Consensus 983 r~----~i~~v~Q~~~--lf~-~ti~~nl~----~~~~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LS 1047 (1293)
++ .|+||||+|. ++. .|+.+++. ....... +.+.++++.+++.+. ....+..+.+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP--------ASRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhCCchhCC
Confidence 43 6999999994 443 36665542 2111111 223333444333211 123456778899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeee
Q 000774 1048 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1048 gGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 1124 (1293)
||||||++|||||+.+|+|||+||||++||+.+...+.+.|+++.+ +.|+|+||||++.+.. ||||++|.+|+|++.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999865 999999999999999
Q ss_pred cChhhhhhcCCChHHHH
Q 000774 1125 DTPEELLSNEGSSFSKM 1141 (1293)
Q Consensus 1125 g~~~el~~~~~~~~~~l 1141 (1293)
|+++++.++....|.+.
T Consensus 236 g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQA 252 (326)
T ss_pred CCHHHHhhCCCChHHHH
Confidence 99999987655555543
No 262
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=367.68 Aligned_cols=219 Identities=25% Similarity=0.404 Sum_probs=183.2
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCh
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 979 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~ 979 (1293)
..++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 23 ~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 23 VVFDTQNLNLWYGED--HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred eEEEEeeeEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 359999999999753 69999999999999999999999999999999999997 699999999999853 345
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCC---CCCHH-H----HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDA-D----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1051 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~~~~-~----~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqk 1051 (1293)
..+++.++|+||++.+|..|+++|+.+.. ...++ . +.++++..++. .++....+..+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 56788899999999999889999996421 11111 1 12222222111 1333445667788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1052 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1052 qrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++++.. |||+++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999876 999999999999999999998
Q ss_pred hhcC
Q 000774 1131 LSNE 1134 (1293)
Q Consensus 1131 ~~~~ 1134 (1293)
.+..
T Consensus 254 ~~~~ 257 (271)
T PRK14238 254 FSNP 257 (271)
T ss_pred HcCC
Confidence 7543
No 263
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=370.86 Aligned_cols=215 Identities=25% Similarity=0.412 Sum_probs=182.0
Q ss_pred cEEEEEEEEEecCC----CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC-hHHH
Q 000774 908 SIKFEDVVLRYRPE----LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG-LMDL 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~----~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~-~~~~ 982 (1293)
.++++|++++|++. .+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999642 236999999999999999999999999999999999999999999999999987543 3567
Q ss_pred hhhceEEccccc--cccccHhhhcCCCCC---CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 983 RKILGIIPQSPV--LFSGTVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 983 r~~i~~v~Q~~~--lf~~ti~~nl~~~~~---~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
|+++||+||+|. +|..|+.+|+.+... ... +++.++++.++ +.........+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVG-----------MYEYRRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCC-----------CHhHhhCCcccCCHHHHHH
Confidence 889999999984 666689999865321 121 22333444444 4444455567899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhccCEEEEEeCCeEeeecChhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||++||+++.+..|||+++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999875 378999999999998789999999999999999999997
Q ss_pred hc
Q 000774 1132 SN 1133 (1293)
Q Consensus 1132 ~~ 1133 (1293)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 53
No 264
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.7e-40 Score=360.20 Aligned_cols=200 Identities=26% Similarity=0.400 Sum_probs=168.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH---HHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~r~~ 985 (1293)
++++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999532 3699999999999999999999999999999999999999999999999999876543 46778
Q ss_pred ceEEcccccccc-ccHhhhcCCCC---CCC----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 986 LGIIPQSPVLFS-GTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 986 i~~v~Q~~~lf~-~ti~~nl~~~~---~~~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
++|+||++.+|. .|+++|+.+.. ... ++++.++++..++ .........+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGL-----------EHKADAFPEQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHHHHHHH
Confidence 999999999886 59999986421 111 1233344444433 3333444568999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCe
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGR 1120 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~ 1120 (1293)
|||+.+|++|||||||++||+.++..+.+.|+++. +++|+|++||+++++.. ||++++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999865 47999999999999987 99999999985
No 265
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=372.68 Aligned_cols=219 Identities=21% Similarity=0.385 Sum_probs=181.1
Q ss_pred ccEEEEEEEEEecCCC---CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC----C-C
Q 000774 907 GSIKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----F-G 978 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~---~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~----~-~ 978 (1293)
+.|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 5699999999997532 259999999999999999999999999999999999999999999999999752 1 3
Q ss_pred hHHHhhhceEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHH
Q 000774 979 LMDLRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 979 ~~~~r~~i~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkq 1052 (1293)
...+|+.|+|+||++ .+|..|+++|+.+.. ....++..+ .+.+.++.+ ++. ...+....+|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~ll~~~--~L~~~~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYK-----KVPELLKLV--QLPEDYVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhcCChhhCCHHHHH
Confidence 456788899999998 467779999996421 112222111 122333332 442 3455667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1129 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 1129 (1293)
|++|||||+.+|++|||||||++||+.+.+.+++.|+++.+ ++|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999866 99999999999999999999
Q ss_pred hhh
Q 000774 1130 LLS 1132 (1293)
Q Consensus 1130 l~~ 1132 (1293)
+..
T Consensus 238 ~~~ 240 (289)
T PRK13645 238 IFS 240 (289)
T ss_pred Hhc
Confidence 864
No 266
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-37 Score=340.01 Aligned_cols=436 Identities=20% Similarity=0.242 Sum_probs=317.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000774 37 RVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLG 116 (1293)
Q Consensus 37 ~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~G~l~~~l~~Dv~~l~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~~~l~~ 116 (1293)
..+...-.++|.++.+|++.-|...+++.+++.++..++.|+..+...+..++.+....+.++++.+.+.+..+.+.++.
T Consensus 74 ~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~ 153 (546)
T COG4615 74 TLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLT 153 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 45666667888888999999999999999999999999999999997667788888888888888889999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 117 ALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENS--FQSKVQNVRNDELSWFRKAQFLAA 194 (1293)
Q Consensus 117 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~~--~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1293)
++.+++.+....+...+.-+...+..+..|+..+..+.+++|.|.++.+.--.. +.+.+.... ++.+. ...+...
T Consensus 154 vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a-~~~r~--~~~~~n~ 230 (546)
T COG4615 154 VVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDA-QEYRH--HIIRANT 230 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcch-HHHHh--hhhhhhH
Confidence 777777777778888888888888889999999999999999999998862211 111111111 11111 1111111
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 000774 195 CNSFILNSIP---VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKI 271 (1293)
Q Consensus 195 ~~~~~~~~~~---~~v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~l~~~~~~ 271 (1293)
+.....+... ..++.+.|..... -+.-+...+.++...+-.+..|+.++...++.+..|.+|++||.++-..|+..
T Consensus 231 f~~la~~~~ni~l~~lIGlvf~lal~-~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a 309 (546)
T COG4615 231 FHLLAVNWSNIMLLGLIGLVFWLALS-LGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKA 309 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccc
Confidence 1111111111 1111122222211 12223334444555555667899999999999999999999999986655443
Q ss_pred cCCCCCCCCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceee----
Q 000774 272 LLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---- 347 (1293)
Q Consensus 272 ~~~~~~~~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~---- 347 (1293)
..+.+...++...|+++||.|+|++. ..-+..||++|++||++-|+|.|||||||++++|+|++.|++|+ +.+
T Consensus 310 ~~~~~q~~p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~-I~ldg~p 386 (546)
T COG4615 310 DFPRPQAFPDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGE-ILLDGKP 386 (546)
T ss_pred cCCCCCcCCcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCc-eeECCcc
Confidence 33333233445679999999999753 36788999999999999999999999999999999999999994 333
Q ss_pred ---------cCcEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 348 ---------RGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 348 ---------~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
|+-++-|+-|-|||+.++. +.. .+++.+.+-++.-.+.+.... .+|..+. ..||-|||.
T Consensus 387 V~~e~ledYR~LfSavFsDyhLF~~ll~-----~e~~as~q~i~~~LqrLel~~ktsl-~d~~fs~-----~kLStGQkK 455 (546)
T COG4615 387 VSAEQLEDYRKLFSAVFSDYHLFDQLLG-----PEGKASPQLIEKWLQRLELAHKTSL-NDGRFSN-----LKLSTGQKK 455 (546)
T ss_pred CCCCCHHHHHHHHHHHhhhHhhhHhhhC-----CccCCChHHHHHHHHHHHHhhhhcc-cCCcccc-----cccccchHH
Confidence 3335666677777765431 111 344555554444444443332 2222222 479999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEe
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 490 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~-~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~ 490 (1293)
|+|+--|++.+-||++|||=-+--||.-+++.++.++-. ...|||++.||||-+....|||++.+++|++++.
T Consensus 456 RlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 456 RLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999999999999887754 4569999999999999999999999999999874
No 267
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=363.76 Aligned_cols=218 Identities=26% Similarity=0.418 Sum_probs=183.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC-----cceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~-----~G~I~i~g~~i~~~--~~~ 980 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 4 ~l~~~~l~~~~~~~--~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHKH--QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECCe--eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 48999999999743 6999999999999999999999999999999999999997 69999999998643 345
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC---C-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.++|+||++.+|..|+++|+.+... . .. +.+.++++..++.+. +....+..+.+|||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDE-------VKDNLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchh-------hhhHhhCCcccCCHHHHH
Confidence 67889999999999998899999974311 1 11 112223333333222 233456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|||+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999877 8999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
...
T Consensus 235 ~~~ 237 (251)
T PRK14249 235 SRP 237 (251)
T ss_pred hCC
Confidence 543
No 268
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=365.26 Aligned_cols=217 Identities=26% Similarity=0.435 Sum_probs=181.7
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~--~~~ 980 (1293)
.|+++|+++.|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGEK--KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCCc--eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 38999999999743 699999999999999999999999999999999999984 899999999998653 234
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC----CCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS----EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~----~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+++.++|+||++.+|..|+++|+.+.. ...+ +++.++++..++.+.+ +...+....+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHHH
Confidence 5678899999999999899999996421 1111 1233333333332211 23356677889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999997667999999999998766 9999999999999999999987
Q ss_pred hc
Q 000774 1132 SN 1133 (1293)
Q Consensus 1132 ~~ 1133 (1293)
+.
T Consensus 234 ~~ 235 (250)
T PRK14262 234 ER 235 (250)
T ss_pred hC
Confidence 54
No 269
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.5e-39 Score=344.10 Aligned_cols=172 Identities=38% Similarity=0.671 Sum_probs=160.9
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++...++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 47899999997533469999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000774 989 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1068 (1293)
Q Consensus 989 v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLl 1068 (1293)
++|++.+|..|+++|+ ||||||||++|||||+.+|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999988999887 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhccCEEEEEeCCeE
Q 000774 1069 LDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1069 LDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~~d~i~vl~~G~i 1121 (1293)
|||||++||+.+++.+.+.|++..+ ++|+|++||+++.+..||++++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999999998753 7899999999999877999999999974
No 270
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=364.01 Aligned_cols=217 Identities=24% Similarity=0.391 Sum_probs=182.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~--~~~ 980 (1293)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGEK--QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECCe--eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 48999999999743 699999999999999999999999999999999999886 799999999998653 334
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC---C-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
..|+.++|+||++.+|..|+++|+.+... . .. +++.++++.+++.+ ++....+.....|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWD-------EVKDDLKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHHHH
Confidence 66888999999999998999999974321 1 11 12233344433321 1223345667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. |||+++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999997767999999999999876 9999999999999999999987
Q ss_pred hc
Q 000774 1132 SN 1133 (1293)
Q Consensus 1132 ~~ 1133 (1293)
..
T Consensus 235 ~~ 236 (251)
T PRK14270 235 LE 236 (251)
T ss_pred cC
Confidence 54
No 271
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-40 Score=367.33 Aligned_cols=217 Identities=25% Similarity=0.443 Sum_probs=180.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCCCC--hHH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKFG--LMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~~~--~~~ 981 (1293)
-+++|++++|++ +++|+|+||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999964 369999999999999999999999999999999999986 47999999999886543 235
Q ss_pred HhhhceEEccccccccccHhhhcCCCC---CC--C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS---EH--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~--~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
+|+.++|+||++.+|..|+++|+.+.. .. . ++++.++++..++.+. +.+.++..+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-------LGDRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhcChhhCCHHHHH
Confidence 688899999999999889999986421 11 1 1122333333332211 122445667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++++.. ||||++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988678999999999999876 9999999999999999999997
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
+..
T Consensus 237 ~~~ 239 (251)
T PRK14244 237 KNP 239 (251)
T ss_pred cCC
Confidence 654
No 272
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=368.91 Aligned_cols=216 Identities=25% Similarity=0.434 Sum_probs=178.4
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecC--CCChHHHhhhc
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA--KFGLMDLRKIL 986 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~--~~~~~~~r~~i 986 (1293)
++++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+.|
T Consensus 2 l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQDE--PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCCc--ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 7899999999743 6999999999999999999999999999999999999999999999999985 23345677889
Q ss_pred eEEccccc--cccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 987 GIIPQSPV--LFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 987 ~~v~Q~~~--lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
+|+||++. ++..|+.+|+.+.. .....+..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL~ 152 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGALV 152 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHHH
Confidence 99999985 56678999986421 112222111 122233332 3333445566789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
.+|++|||||||++||+.+...+.+.|+++. .++|||+|||+++.+.. ||++++|++|++++.|+++++...
T Consensus 153 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 153 LQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999865 47899999999999866 999999999999999999998753
No 273
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.4e-40 Score=358.96 Aligned_cols=201 Identities=31% Similarity=0.476 Sum_probs=164.4
Q ss_pred EEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEE
Q 000774 910 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 989 (1293)
Q Consensus 910 ~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 989 (1293)
+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+.++|+
T Consensus 1 ~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGGH--PVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECCE--EeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 368999999653 6999999999999999999999999999999999999999999999998764 467789999
Q ss_pred cccccc---ccccHhhhcCCCCCC-------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 990 PQSPVL---FSGTVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 990 ~Q~~~l---f~~ti~~nl~~~~~~-------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
||++.+ +..|+++|+.+.... ..++. ...+.+.++.+ |++........+||||||||++||||
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~a 146 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERV--GLSELADRQIGELSGGQQQRVLLARA 146 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHHH
Confidence 999976 557999998642211 00110 11122333332 44444455667899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
|+.+|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++++.. ||+|++|++| +++.|
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 999999999999999999999999999999865 57899999999999876 9999999886 55543
No 274
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1e-39 Score=358.25 Aligned_cols=205 Identities=23% Similarity=0.365 Sum_probs=169.6
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH---HHhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~r~~ 985 (1293)
++++|++++|++. +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...++. ..|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4689999999643 3699999999999999999999999999999999999999999999999998776543 46778
Q ss_pred ceEEccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
++|+||++.+|.. |+++|+.+.. ....++..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 152 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAIV 152 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHHH
Confidence 9999999999875 9999986421 111111111 122233332 4444445556789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeE
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1121 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 1121 (1293)
.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++
T Consensus 153 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 153 NSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999874 47999999999999986 999999999974
No 275
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=367.52 Aligned_cols=203 Identities=31% Similarity=0.453 Sum_probs=177.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 353 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~ 353 (1293)
.|+++|++++|++ .. +++|+||+|++||+++|+|||||||||||++|+|+.+|++|.... ..+.||+
T Consensus 3 ~i~l~~v~K~yg~--~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGS--FE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCC--ce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 5899999999973 12 999999999999999999999999999999999999999994322 1246999
Q ss_pred EcCCcccc-CccHHHHHccCCCC-------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWIF-NATVRDNILFGSAF-------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~~~-------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
|+|+..|| ..||+|||.|+... .++++.++++..++.+.++..| .+|||||||||||||||
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHHHH
Confidence 99999997 67999999998532 1467888899999999988887 48999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
.++|++++||||+|+||++.+..+-..+.+..+ -|.|+|.||||..++. -+|||.+|++|+|.+.|++.|+.++.
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 999999999999999999999888777666433 3789999999988776 58999999999999999999998664
No 276
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-40 Score=371.89 Aligned_cols=203 Identities=33% Similarity=0.498 Sum_probs=179.3
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceee-----------cCcE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-----------RGTV 351 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~-----------~~~i 351 (1293)
+.++++|++++|+ +..+++|+||+|++||+++|+|||||||||||++|+|+..|++|. +.+ ++.|
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~-I~l~G~~i~~lpp~kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGE-ILLDGEDITDVPPEKRPI 79 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCce-EEECCEECCCCChhhccc
Confidence 4699999999996 478999999999999999999999999999999999999999983 333 3469
Q ss_pred EEEcCCcccc-CccHHHHHccCCC----CC-H---HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVSWIF-NATVRDNILFGSA----FE-P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~~l~-~~Tv~eni~~g~~----~~-~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
|+|+|+.-|| +.||+|||.||.. .. + +++.++++..++.+..+..| .+|||||+||||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHH
Confidence 9999999998 7899999999954 12 2 47788899999988777766 58999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchh-hhCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
|||..+|++||||||+|+||.+-++++...+.+.. ..|.|.|+||||.++. ..+|||++|++|+|...|+++|+....
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999987776643 3489999999998764 568999999999999999999998764
No 277
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=363.02 Aligned_cols=217 Identities=26% Similarity=0.400 Sum_probs=182.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecC-CCChHH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA-KFGLMD 981 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~-~~~~~~ 981 (1293)
.++++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++. ..++..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 3899999999974 3699999999999999999999999999999999999986 5999999999985 345667
Q ss_pred HhhhceEEccccccccccHhhhcCCCC---CCC-H----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS---EHS-D----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~~-~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
+|+.++|+||++.+|..|+++|+.+.. ... + +++.++++..++.+ .+....+....+||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWD-------EVKDRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCch-------hhhHHhhcCcccCCHHHHHH
Confidence 788999999999999899999996421 111 1 11222333333221 12234556677899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+++|||++||+++.+.. |||+++|++|++++.|+++++..
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998777999999999999877 99999999999999999998864
Q ss_pred c
Q 000774 1133 N 1133 (1293)
Q Consensus 1133 ~ 1133 (1293)
.
T Consensus 234 ~ 234 (249)
T PRK14253 234 N 234 (249)
T ss_pred C
Confidence 3
No 278
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=366.63 Aligned_cols=218 Identities=26% Similarity=0.411 Sum_probs=183.3
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCC--CCh
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGL 979 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~--~~~ 979 (1293)
+.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 24 ~~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 24 TALEVRNLNLFYGDK--QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred cEEEEEEEEEEECCe--eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 359999999999653 699999999999999999999999999999999999984 89999999999864 344
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1051 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqk 1051 (1293)
..+|+.++|+||++.+|..|+++|+.+.. .. .. +.+.++++.+++.+.+ .+..+..+.+||||||
T Consensus 102 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 102 AELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-------KDRLHENAFGLSGGQQ 174 (272)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-------HHHhhCCcccCCHHHH
Confidence 56788999999999999889999996421 11 11 1233333433332211 2345566788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1052 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1052 qrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++++.. ||||++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999876 999999999999999999998
Q ss_pred hhc
Q 000774 1131 LSN 1133 (1293)
Q Consensus 1131 ~~~ 1133 (1293)
.+.
T Consensus 255 ~~~ 257 (272)
T PRK14236 255 FTS 257 (272)
T ss_pred hcC
Confidence 754
No 279
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-39 Score=346.02 Aligned_cols=193 Identities=28% Similarity=0.443 Sum_probs=161.0
Q ss_pred EEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------------e
Q 000774 285 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------I 347 (1293)
Q Consensus 285 i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------------~ 347 (1293)
++++|+++.|..+. ..++|+++||+|++||+++|+|||||||||||++|.|+..|++|.... .
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999996432 247999999999999999999999999999999999999998884222 2
Q ss_pred cCcEEEEcCCcccc-CccHHHHHccC----CCC---CHHHHHHHHHHcCChhHHh-cCCCCCcccccCCCCCCChHHHHH
Q 000774 348 RGTVAYVPQVSWIF-NATVRDNILFG----SAF---EPARYEKAIDVTSLQHDLD-LLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 348 ~~~i~~v~Q~~~l~-~~Tv~eni~~g----~~~---~~~~~~~~~~~~~l~~~~~-~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
+..||||+|+..|. +.||.|||.+. ... ..++....++..++.+... ..| .+||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 34699999999885 78999999853 111 1234555666667765554 444 5899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEE
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVK 488 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~ 488 (1293)
|||||||+.+|++++.||||.+||.++.+.+++.+..... .|+|+|+||||......|||++.|.+|++.
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 9999999999999999999999999999999987666544 489999999999999999999999999844
No 280
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=363.50 Aligned_cols=218 Identities=24% Similarity=0.407 Sum_probs=182.6
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~--~~~ 980 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 6 ~i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGEK--HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECCe--eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 48999999999643 699999999999999999999999999999999999763 489999999998765 345
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCCC----CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSEH----SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~----~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
..|+.++|+||++.+|+.|+++|+.+.... .. +.+.++++.+++.+ ++.+..+..+.+|||||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-------EVKDRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-------hhHHHhhcChhhCCHHHHH
Confidence 677889999999999988999999753211 11 12223333332211 2234456677889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999988767999999999999976 9999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
...
T Consensus 237 ~~~ 239 (253)
T PRK14261 237 ENP 239 (253)
T ss_pred hCC
Confidence 543
No 281
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.2e-39 Score=359.04 Aligned_cols=210 Identities=22% Similarity=0.338 Sum_probs=172.6
Q ss_pred cEEEEEEEEEecCCC--CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---H
Q 000774 908 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~--~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~ 982 (1293)
.|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 489999999997532 25999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hhhceEEccccccccc-cHhhhcCCC---CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 983 -RKILGIIPQSPVLFSG-TVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 983 -r~~i~~v~Q~~~lf~~-ti~~nl~~~---~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
++.++|+||++.+|.. |+.+|+.+. ......+. ...+.++++.+ +++.........||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3579999999998875 999998632 11111111 11123333332 344444455678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeEeee
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 1124 (1293)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999998642 7899999999999877999999999999764
No 282
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=364.88 Aligned_cols=221 Identities=24% Similarity=0.357 Sum_probs=184.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i 986 (1293)
.++++|++++|++. ++|+++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... +..+
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGGL--LAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECCE--EEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 48999999999643 69999999999999999999999999999999999999999999999999988776554 4459
Q ss_pred eEEccccccccc-cHhhhcCCCCC----------CCH-HHHH--HHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSE----------HSD-ADLW--EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~----------~~~-~~~~--~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
+|+||++.+|.. |+++|+.+... ..+ .... +......+.++++.+ |++...+....+|||||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHHH
Confidence 999999999976 99999874210 000 0000 000111233445543 6666677788899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1129 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 1129 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|||++||+++.+.. ||++++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999998653 6899999999999876 99999999999999999998
Q ss_pred hhh
Q 000774 1130 LLS 1132 (1293)
Q Consensus 1130 l~~ 1132 (1293)
+.+
T Consensus 241 ~~~ 243 (255)
T PRK11300 241 IRN 243 (255)
T ss_pred Hhh
Confidence 864
No 283
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.5e-39 Score=379.75 Aligned_cols=209 Identities=24% Similarity=0.370 Sum_probs=172.3
Q ss_pred CceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCe----ecCCCChHHHh----hhceEEcccccc
Q 000774 924 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF----DIAKFGLMDLR----KILGIIPQSPVL 995 (1293)
Q Consensus 924 ~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~----~i~~~~~~~~r----~~i~~v~Q~~~l 995 (1293)
.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++...+...++ ++|+|+||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5899999999999999999999999999999999999999999999996 56666655443 479999999999
Q ss_pred cc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000774 996 FS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 1071 (1293)
Q Consensus 996 f~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDE 1071 (1293)
|+ .|+++|+.+.. .....+. ...+.+.++.+ |++...+....+||||||||++|||||+.+|+||||||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDE 190 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDE 190 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 97 59999996421 1111111 11122333332 44444555667899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHH
Q 000774 1072 ATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1072 pTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 1139 (1293)
||++||+.+++.+++.|.++.+ ++|+|+||||++++.. ||||++|++|++++.|++++++.++...|.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 191 PFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 9999999999999999998753 7999999999999866 999999999999999999999876544444
No 284
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.8e-39 Score=355.63 Aligned_cols=210 Identities=22% Similarity=0.334 Sum_probs=184.3
Q ss_pred EEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh----HHHhhh
Q 000774 910 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL----MDLRKI 985 (1293)
Q Consensus 910 ~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~----~~~r~~ 985 (1293)
.+.|+.++|+++ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 468999999755 469999999999999999999999999999999999999999999999998866542 235677
Q ss_pred ceEEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 986 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 986 i~~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
++|+||++.+|+.|+++|+.......+++..++++..++.+.+..+|.++++..+....+||||||||++||||++.+|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999889999997654444556677888888888888889999988888889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHH--HHHHHc-CCcEEEEEecCcchhhccCEEEEEeCCe
Q 000774 1066 ILVLDEATAAVDVRTDALIQK--TIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGR 1120 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~--~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~ 1120 (1293)
+|||||||++||+.+.+.+.+ .++... .+.|+|++||+++.+..||++++|++|.
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999999888 454443 3689999999999987899999999884
No 285
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.1e-39 Score=357.96 Aligned_cols=210 Identities=24% Similarity=0.337 Sum_probs=178.7
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++|+++.|++. ++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++..+++.++
T Consensus 7 ~i~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGDA--KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCCc--eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 48999999999743 6999999999999999999999999999999999999999999999999998888877888999
Q ss_pred EEccccccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
|+||++.+|+.|+++|+.+.. ..... ...+.+.++.+ |+. +.....+.+||||||||++|||||+.+
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~-------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPD-------PAIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFM 155 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChH-------HHHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999889999986421 11110 01123344443 443 345667788999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEe-CCeEeeecChh
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLD-SGRVLEYDTPE 1128 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~-~G~i~~~g~~~ 1128 (1293)
|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|+ ++..+++|+|+
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 156 PKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999998753 789999999999998899999995 66677778775
No 286
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-39 Score=366.66 Aligned_cols=218 Identities=26% Similarity=0.440 Sum_probs=181.5
Q ss_pred ccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCC--CCh
Q 000774 907 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 979 (1293)
Q Consensus 907 g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~--~~~ 979 (1293)
..|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .++
T Consensus 38 ~~l~i~~l~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGDE--QALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECCE--eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 358999999999753 69999999999999999999999999999999999997 689999999999864 345
Q ss_pred HHHhhhceEEccccccccccHhhhcCCCC---CCC---HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 980 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~~---~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
..++++++|+||++.+|..|+++|+.+.. ... ++++.++++..++... +....+..+.+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDE-------VKDQLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCch-------hHHHHhCCcccCCHHHHHH
Confidence 56788999999999999889999986421 111 2223334443333211 1223456678899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEE-EEeCCeEeeecChhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRIL-LLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~-vl~~G~i~~~g~~~el~ 1131 (1293)
++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. |||++ +|++|++++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998767899999999999877 99976 56999999999999987
Q ss_pred hc
Q 000774 1132 SN 1133 (1293)
Q Consensus 1132 ~~ 1133 (1293)
++
T Consensus 269 ~~ 270 (285)
T PRK14254 269 EN 270 (285)
T ss_pred hC
Confidence 54
No 287
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-39 Score=354.67 Aligned_cols=200 Identities=26% Similarity=0.405 Sum_probs=168.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 4789999999643 2 39999999999999999999999999999999999999999999999876654 3578999
Q ss_pred Eccccccccc-cHhhhcCCCCC--C-----CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE--H-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~--~-----~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||++.+|.. |+++|+.+... . .++++.++++..++. ........+||||||||++|||||
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLA-----------GLEKRLPGELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCH-----------HHHhCCcccCCHHHHHHHHHHHHH
Confidence 9999999975 99999964321 1 122344444444443 334445568999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. |||+++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999875 37899999999999977 9999999999998754
No 288
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.7e-39 Score=364.45 Aligned_cols=219 Identities=26% Similarity=0.414 Sum_probs=181.9
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|+++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 2 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGGR--LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999999988887778888999
Q ss_pred Eccccccc-cccHhhhcCCCCCCCHHHHH---HHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLF-SGTVRFNLDPFSEHSDADLW---EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf-~~ti~~nl~~~~~~~~~~~~---~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.++ ..|+++|+.+...... ... .......+.+.++.+ ++.......+..||||||||++||||++.+|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHR-SLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhh-hhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999654 5699999965311000 000 000011233344443 3444455667789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
++|||||||++||+.+.+.+.+.|++..+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999998753 6899999999999965 99999999999999999988753
No 289
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=356.75 Aligned_cols=204 Identities=25% Similarity=0.472 Sum_probs=171.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|+++.|++. ++++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ..++.++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGRV--TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECCE--EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 4789999999643 69999999999999999999999999999999999999999999999988743 45778999
Q ss_pred Eccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|.. |+++|+.+.. .....+. ...+.++++.+ |++........+||||||||++|||||+.+|
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 147 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHDP 147 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998875 9999986421 1111111 11234445543 5555566677889999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 148 ~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 148 ELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999999999865 46899999999999876 9999999999998764
No 290
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=6.1e-39 Score=362.01 Aligned_cols=219 Identities=24% Similarity=0.402 Sum_probs=181.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCee-----cCCCChHHH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD-----IAKFGLMDL 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~-----i~~~~~~~~ 982 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+ +...+....
T Consensus 6 ~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGPR--KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCCc--eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 48999999999753 69999999999999999999999999999999999999999999999998 776665543
Q ss_pred ----hhhceEEccccc--ccc-ccHhhhcCC----CCCCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhH
Q 000774 983 ----RKILGIIPQSPV--LFS-GTVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 1050 (1293)
Q Consensus 983 ----r~~i~~v~Q~~~--lf~-~ti~~nl~~----~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGq 1050 (1293)
++.++|+||++. ++. .|+.+|+.. +......+.. ..+.++++.+ +++ +..+..+.+|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~Gq 156 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGGM 156 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHHH
Confidence 457999999984 343 478888742 1111111111 1245566665 343 45677888999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecCh
Q 000774 1051 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1127 (1293)
Q Consensus 1051 kqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 1127 (1293)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 157 QQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988653 7899999999999986 999999999999999999
Q ss_pred hhhhhcCC
Q 000774 1128 EELLSNEG 1135 (1293)
Q Consensus 1128 ~el~~~~~ 1135 (1293)
+++.....
T Consensus 237 ~~~~~~~~ 244 (258)
T PRK11701 237 DQVLDDPQ 244 (258)
T ss_pred HHHhcCCC
Confidence 99875443
No 291
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=364.29 Aligned_cols=218 Identities=26% Similarity=0.397 Sum_probs=182.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~--~~~~ 980 (1293)
.++++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (259)
T PRK14260 7 AIKVKDLSFYYNTS--KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININ 84 (259)
T ss_pred eEEEEEEEEEECCe--EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchH
Confidence 48999999999753 699999999999999999999999999999999999986 48999999999854 3445
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC----CCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS----EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~----~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+++.++|+||++.+|+.|+++|+.+.. ...+ +.+.++++.+++.+.+ ....+..+..|||||||
T Consensus 85 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 157 (259)
T PRK14260 85 RLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQQQ 157 (259)
T ss_pred hhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHHHH
Confidence 6788899999999999899999986421 1111 2233444444443222 22345567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEe-----CCeEeeecC
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD-----SGRVLEYDT 1126 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~-----~G~i~~~g~ 1126 (1293)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++++.. ||++++|+ +|++++.|+
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~ 237 (259)
T PRK14260 158 RLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGV 237 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCC
Confidence 999999999999999999999999999999999999997667999999999999877 99999998 599999999
Q ss_pred hhhhhhcC
Q 000774 1127 PEELLSNE 1134 (1293)
Q Consensus 1127 ~~el~~~~ 1134 (1293)
++++.+..
T Consensus 238 ~~~~~~~~ 245 (259)
T PRK14260 238 TTQIFSNP 245 (259)
T ss_pred HHHHhcCC
Confidence 99987543
No 292
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-39 Score=364.48 Aligned_cols=217 Identities=26% Similarity=0.453 Sum_probs=180.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~--~~~~ 980 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 38999999999753 699999999999999999999999999999999999975 69999999999853 3455
Q ss_pred HHhhhceEEccccccccc-cHhhhcCCCC---C-CCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHH
Q 000774 981 DLRKILGIIPQSPVLFSG-TVRFNLDPFS---E-HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1051 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~-ti~~nl~~~~---~-~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqk 1051 (1293)
.+|+.++|+||++.+|.. |+++|+.+.. . ... +.+.++++..++.+. +.........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNE-------VKDRLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhhHhhCCcccCCHHHH
Confidence 678889999999998874 9999986321 1 111 122233333332211 12345566788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEe------CCeEeee
Q 000774 1052 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD------SGRVLEY 1124 (1293)
Q Consensus 1052 qrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~------~G~i~~~ 1124 (1293)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++++.. ||||++|+ +|++++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999988667999999999999866 99999997 7999999
Q ss_pred cChhhhhhc
Q 000774 1125 DTPEELLSN 1133 (1293)
Q Consensus 1125 g~~~el~~~ 1133 (1293)
|+++++...
T Consensus 235 ~~~~~~~~~ 243 (258)
T PRK14241 235 DDTEKIFSN 243 (258)
T ss_pred CCHHHHHhC
Confidence 999998754
No 293
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.6e-39 Score=355.76 Aligned_cols=207 Identities=27% Similarity=0.398 Sum_probs=171.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---Hhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~r~~ 985 (1293)
|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... +|+.
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999432 36999999999999999999999999999999999999999999999999998766443 6788
Q ss_pred ceEEccccccc-cccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 986 LGIIPQSPVLF-SGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 986 i~~v~Q~~~lf-~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
++|+||++.+| ..|+++|+.+.. ....++..+. +.++++.+ +++........+||||||||++||||++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 153 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAVV 153 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHHH
Confidence 99999999875 569999996421 1222222111 12233332 3444445566789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEee
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1123 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 1123 (1293)
.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++++.. ||+|++|++|+++.
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 154 NKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 9999999999999999999999999999874 46899999999999987 99999999999864
No 294
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=350.35 Aligned_cols=222 Identities=30% Similarity=0.419 Sum_probs=191.6
Q ss_pred cEEEEEEEEEecCCC----------------------CCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcc
Q 000774 908 SIKFEDVVLRYRPEL----------------------PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 965 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~----------------------~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G 965 (1293)
.|+++||++-|+.+. ...++|+||+|+.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 489999999886531 1358899999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCChHHHh----hhceEEccccccccc-cHhhhcCCCCCC---C----HHHHHHHHHHhhHHHHHHHccC
Q 000774 966 RILIDGFDIAKFGLMDLR----KILGIIPQSPVLFSG-TVRFNLDPFSEH---S----DADLWEALERAHLKDAIRRNSL 1033 (1293)
Q Consensus 966 ~I~i~g~~i~~~~~~~~r----~~i~~v~Q~~~lf~~-ti~~nl~~~~~~---~----~~~~~~~l~~~~l~~~i~~lp~ 1033 (1293)
+|.++|.|+.+++..++| +++++|+|+..||.. ||.+|..+.-+. . ++...++++.+|+.+|-.+.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~y-- 161 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKY-- 161 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcC--
Confidence 999999999999988764 469999999999987 999998765332 1 23355566666666655544
Q ss_pred CcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-c
Q 000774 1034 GLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-C 1110 (1293)
Q Consensus 1034 gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~ 1110 (1293)
+.+||||+|||+.|||||..+|+|||+|||+|+|||--+..+++-|.++-+ ++||++||||+++..+ -
T Consensus 162 ---------p~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 162 ---------PNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ---------cccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 468999999999999999999999999999999999999999999887643 6999999999999876 9
Q ss_pred CEEEEEeCCeEeeecChhhhhhcCCChHHH
Q 000774 1111 DRILLLDSGRVLEYDTPEELLSNEGSSFSK 1140 (1293)
Q Consensus 1111 d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 1140 (1293)
|||.+|++|+|+..|+|+|++.++...|-.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 999999999999999999999877666643
No 295
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8e-36 Score=355.30 Aligned_cols=446 Identities=17% Similarity=0.187 Sum_probs=331.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCCh-----hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 000774 31 YFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFAS-----GKITNLMTTDAEQLQQV-CQALHTLWSAPFRIIISLVL 104 (1293)
Q Consensus 31 ~~~~~~~~~~~~~~~l~~~i~~k~l~l~~~~~~~~~~-----G~l~~~l~~Dv~~l~~~-~~~l~~~~~~~~~~i~~~~~ 104 (1293)
..+...++..+.|.-|...+.++.+.....++..... -..=+|+..|+..+.+. +.....++.+++.++....+
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~i 185 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGI 185 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667888999999999999999887555433322 23447999998888763 33445555555555544445
Q ss_pred HHHHHh---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 000774 105 LYNELG---------------VASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWEN 169 (1293)
Q Consensus 105 l~~~~~---------------~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~IK~~~~e~ 169 (1293)
+|...| .+.+++++-.++...+..++++...+..-+..+..+.....+....++...|-.|+.|+
T Consensus 186 Lw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~ 265 (604)
T COG4178 186 LWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEK 265 (604)
T ss_pred HHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcH
Confidence 553222 23333333333333445567777777777777888888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000774 170 SFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNM 247 (1293)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~lt~~~~~~~l~~~~~l~~pl~~l~~~ 247 (1293)
...+++++....-.+..++......-...+......+ +.-...++-.+..|.++.|.++.....|..+...+..+...
T Consensus 266 ~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~ 345 (604)
T COG4178 266 VERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDN 345 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777766655554433322222122221111111 11222334446789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhc---c-cCCCCCC------CCCCCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEE
Q 000774 248 ITQVVNANVSLKRMEEFLLAEEK---I-LLPNPPL------TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVA 317 (1293)
Q Consensus 248 ~~~~~~~~~s~~Ri~~~l~~~~~---~-~~~~~~~------~~~~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~ 317 (1293)
+..+..-++++.|+.+|-..-+. + ..+.... ......|+++|++..-|. +++.++++||++++||.+.
T Consensus 346 ~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~--~~~ll~~l~~~v~~G~~ll 423 (604)
T COG4178 346 YDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPD--GQTLLSELNFEVRPGERLL 423 (604)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCC--CCeeeccceeeeCCCCEEE
Confidence 99999999999999998754321 1 0011100 001457999999999874 4689999999999999999
Q ss_pred EEcCCCCcHHHHHHHHhcCCCCCCCCceeecC-cEEEEcCCccccCccHHHHHccCCC---CCHHHHHHHHHHcCChhHH
Q 000774 318 IVGGTGEGKTSLISAMLGELPPVSDASAVIRG-TVAYVPQVSWIFNATVRDNILFGSA---FEPARYEKAIDVTSLQHDL 393 (1293)
Q Consensus 318 lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~~-~i~~v~Q~~~l~~~Tv~eni~~g~~---~~~~~~~~~~~~~~l~~~~ 393 (1293)
|.|+||||||||+++|+|++|--+|....-.+ .+-|+||.|++..||.||-|++.+. .+++++.+++..|+|.+.+
T Consensus 424 I~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~ 503 (604)
T COG4178 424 ITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLA 503 (604)
T ss_pred EECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHH
Confidence 99999999999999999999887875444333 4899999999999999999999753 5789999999999999999
Q ss_pred hcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchh
Q 000774 394 DLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFL 473 (1293)
Q Consensus 394 ~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l 473 (1293)
+.+.+-+ .-...|||||||||++||.|+++|++++|||+||+||++++..+++. ++...++.|+|-|.||....
T Consensus 504 ~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~~lp~~tvISV~Hr~tl~ 577 (604)
T COG4178 504 ERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKEELPDATVISVGHRPTLW 577 (604)
T ss_pred HHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHhhCCCCEEEEeccchhhH
Confidence 8876532 23458999999999999999999999999999999999999999875 55566899999999998888
Q ss_pred hhCCeEEEEeC
Q 000774 474 SQVDRIILVHE 484 (1293)
Q Consensus 474 ~~~d~i~~l~~ 484 (1293)
...++.+.+.+
T Consensus 578 ~~h~~~l~l~~ 588 (604)
T COG4178 578 NFHSRQLELLD 588 (604)
T ss_pred HHHhhheeecc
Confidence 77777766653
No 296
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-39 Score=356.43 Aligned_cols=208 Identities=26% Similarity=0.377 Sum_probs=176.4
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++||+++|++. ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999642 239999999999999999999999999999999999999999999999876544 3567999
Q ss_pred Eccccccccc-cHhhhcCCCC-CC---C---HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPFS-EH---S---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~-~~---~---~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||++.+|.+ |+++|+.+.. .. . ++++.++++..++ +.........||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGI-----------EDLLARLPGQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCc-----------HHHHhCCcccCCHHHHHHHHHHHHH
Confidence 9999999975 9999996421 11 1 2234444444444 4444555568999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998653 7899999999999876 999999999999999999998753
No 297
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-39 Score=363.20 Aligned_cols=220 Identities=26% Similarity=0.399 Sum_probs=183.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCCC-hHH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFG-LMD 981 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~~-~~~ 981 (1293)
.++++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+ ...
T Consensus 21 ~l~i~nl~~~~~~~--~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAGK--TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECCE--EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 48999999999753 699999999999999999999999999999999999986 6999999999987653 346
Q ss_pred HhhhceEEccccccccccHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHc--cCCcchhhhcCCCCCChhHHHHHH
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRN--SLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~l--p~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+|++++|+||++.+|..|+++|+.+.. ..++.+..+. +.+.++.+ ...+.+.....+.+||||||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGV-----AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999899999996421 1122222211 12222222 111223455677889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcC
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1134 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 1134 (1293)
|||||+.+|+||||||||++||+.+.+.+.+.|+++.+++|||+|||+++.+.. |||+++|++|++++.|+++++.+..
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999999987667999999999999876 9999999999999999999997643
No 298
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.6e-39 Score=323.00 Aligned_cols=199 Identities=28% Similarity=0.477 Sum_probs=172.4
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeec-----------CcEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVAY 353 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~-----------~~i~~ 353 (1293)
|.+++|.|+|+.. ==..+++|++||++||+||||||||||+++++|+..|.+|. +.+. +.|++
T Consensus 2 l~L~~V~~~y~~~-----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~-i~i~g~d~t~~~P~~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHL-----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGE-ILINGVDHTASPPAERPVSM 75 (231)
T ss_pred ccccceEEeeCcc-----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCce-EEEcCeecCcCCcccCChhh
Confidence 5678999999631 13578999999999999999999999999999999999984 3332 35999
Q ss_pred EcCCcccc-CccHHHHHccCCC-------CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWIF-NATVRDNILFGSA-------FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~~-------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
++|++.|| ..||.+||-+|.. .+.++++.++..+++..+.+.+|. +||||||||+||||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 99999999 6899999999942 234678889999999999999995 8999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhcc
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~-~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
+++-+|++||||+|+|||.-+......+... ..++.|+++|||+++.+.. +|+++++++|+|.++|+.+++....
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 9999999999999999999998887644432 3457899999999998875 7999999999999999999887654
No 299
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-39 Score=366.46 Aligned_cols=216 Identities=26% Similarity=0.450 Sum_probs=179.7
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC--CChHHHhhhc
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--FGLMDLRKIL 986 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~--~~~~~~r~~i 986 (1293)
++++||+++|++. .++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999643 359999999999999999999999999999999999999999999999999852 2344678899
Q ss_pred eEEcccc--ccccccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 987 GIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 987 ~~v~Q~~--~lf~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
+|+||++ .+|..|+++|+.+.. .....+..+ .+.+.++.+ |++......+.+||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral~ 153 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGILA 153 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 9999998 467789999996321 112211111 122333332 4444445566789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
.+|++|||||||++||+.+...+.+.|+++.+ ++|||++||+++.+.. |||+++|++|++++.|+++++.+
T Consensus 154 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 154 MKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999998754 7899999999999876 99999999999999999999875
No 300
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4e-39 Score=373.23 Aligned_cols=226 Identities=25% Similarity=0.411 Sum_probs=184.0
Q ss_pred cEEEEEEEEEecC--CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC---cceEEECCeecCCCChHHH
Q 000774 908 SIKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE---RGRILIDGFDIAKFGLMDL 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~--~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~---~G~I~i~g~~i~~~~~~~~ 982 (1293)
.++++|++++|+. +..++|+||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++..++...+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 4899999999953 2235999999999999999999999999999999999999996 9999999999998887665
Q ss_pred h----hhceEEcccc--cccc-ccHhhhcC----CCCCCCHHH----HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCC
Q 000774 983 R----KILGIIPQSP--VLFS-GTVRFNLD----PFSEHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1047 (1293)
Q Consensus 983 r----~~i~~v~Q~~--~lf~-~ti~~nl~----~~~~~~~~~----~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LS 1047 (1293)
+ +.|+||||+| .++. .|+.+|+. .....+..+ +.+.++.+++ +.+ ...++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~-~~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEA-RKRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CCh-HHHhcCCcccCC
Confidence 3 4799999999 4554 37777663 221222222 2222222222 221 123466778999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeee
Q 000774 1048 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1048 gGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 1124 (1293)
||||||++|||||+.+|++||+||||++||+.+...+.+.|+++.+ +.|+|+||||++.+.. ||||+||.+|+|++.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 7899999999999876 999999999999999
Q ss_pred cChhhhhhcCCChHHHH
Q 000774 1125 DTPEELLSNEGSSFSKM 1141 (1293)
Q Consensus 1125 g~~~el~~~~~~~~~~l 1141 (1293)
|+++++.+.....|.+.
T Consensus 244 g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQPSHPYSIG 260 (330)
T ss_pred CCHHHHHhCCCCHHHHH
Confidence 99999997665556543
No 301
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-39 Score=363.88 Aligned_cols=218 Identities=23% Similarity=0.410 Sum_probs=183.0
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+..
T Consensus 20 ~l~~~nl~~~~~~~--~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~ 97 (274)
T PRK14265 20 VFEVEGVKVFYGGF--LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSV 97 (274)
T ss_pred eEEEeeEEEEeCCe--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhH
Confidence 59999999999753 699999999999999999999999999999999999864 59999999999854 2344
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC---C---CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1054 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~---~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl 1054 (1293)
.+|+.|+|+||++.+|..|+.+|+..... . .++.+.++++.+++.+.+ .......+..||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 98 KLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQRL 170 (274)
T ss_pred HHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHHHH
Confidence 66889999999999998899999964321 1 122233444444443222 2234556778999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEe---------CCeEeee
Q 000774 1055 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD---------SGRVLEY 1124 (1293)
Q Consensus 1055 ~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~---------~G~i~~~ 1124 (1293)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|||++||+++.+.. |||+++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998777999999999999876 99999997 8999999
Q ss_pred cChhhhhhcC
Q 000774 1125 DTPEELLSNE 1134 (1293)
Q Consensus 1125 g~~~el~~~~ 1134 (1293)
|+++++....
T Consensus 251 g~~~~~~~~~ 260 (274)
T PRK14265 251 SPTEQMFGSP 260 (274)
T ss_pred CCHHHHHhCC
Confidence 9999987543
No 302
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.5e-40 Score=436.47 Aligned_cols=224 Identities=25% Similarity=0.386 Sum_probs=192.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.|+++|++++|+++.+++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....|+.+|
T Consensus 928 ~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~IG 1006 (2272)
T TIGR01257 928 GVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSLG 1006 (2272)
T ss_pred eEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcEE
Confidence 599999999996333469999999999999999999999999999999999999999999999999965 4566788999
Q ss_pred EEccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
||||++.+|+. |++|||.++.. ...++.. ..+.+.++.+ |++...+....+|||||||||+|||||+.+
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~-----~~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi~~ 1079 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQ-----LEMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFVGD 1079 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHcC
Confidence 99999999975 99999975321 1221111 1233444443 566666777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCCChHH
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 1139 (1293)
|+||||||||+|||+.+++.+++.|++..+++|||++||++++++. ||||++|++|++++.|++++|+++.+..|+
T Consensus 1080 PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy~ 1156 (2272)
T TIGR01257 1080 AKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFY 1156 (2272)
T ss_pred CCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcEE
Confidence 9999999999999999999999999998778999999999999987 999999999999999999999987765554
No 303
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.2e-39 Score=355.33 Aligned_cols=204 Identities=26% Similarity=0.441 Sum_probs=171.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC--CChHHHhhhc
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--FGLMDLRKIL 986 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~--~~~~~~r~~i 986 (1293)
++++||+++|++. ++|+++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+....++.+
T Consensus 1 l~~~~l~~~~~~~--~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGDF--HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECCe--EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 4689999999753 69999999999999999999999999999999999999999999999999853 3445678899
Q ss_pred eEEcccccccc-ccHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhc
Q 000774 987 GIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1061 (1293)
Q Consensus 987 ~~v~Q~~~lf~-~ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall 1061 (1293)
+|+||++.+|. .|+++|+.+.. ....++.. ..+.+.++.+ |++........+||||||||++||||++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~ 151 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAE-----ERALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALA 151 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHHh
Confidence 99999999886 59999986431 11111111 1123344443 5555566677889999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeE
Q 000774 1062 RRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRV 1121 (1293)
Q Consensus 1062 ~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 1121 (1293)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++
T Consensus 152 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 152 MNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999998754 7899999999999976 999999999975
No 304
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=363.43 Aligned_cols=220 Identities=22% Similarity=0.355 Sum_probs=184.6
Q ss_pred CCccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecC----
Q 000774 905 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA---- 975 (1293)
Q Consensus 905 ~~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~---- 975 (1293)
..+.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 13 ~~~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 13 TQQKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CCceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 34569999999999753 699999999999999999999999999999999999985 7999999998774
Q ss_pred CCChHHHhhhceEEccccccccccHhhhcCCCC---CCC-----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCC
Q 000774 976 KFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHS-----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1047 (1293)
Q Consensus 976 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~~-----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LS 1047 (1293)
......+++.++|+||++.+|.+|+++|+.+.. ... ++++.++++.+++.+ ++.+..+.....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCC
Confidence 233456788899999999999889999996421 111 223344444443322 22344566678899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecC
Q 000774 1048 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1048 gGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 1126 (1293)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++..++|+|+|||+++++.. |||+++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998767899999999999876 99999999999999999
Q ss_pred hhhhhhc
Q 000774 1127 PEELLSN 1133 (1293)
Q Consensus 1127 ~~el~~~ 1133 (1293)
++++...
T Consensus 244 ~~~~~~~ 250 (265)
T PRK14252 244 TDTIFIK 250 (265)
T ss_pred HHHHHhC
Confidence 9998754
No 305
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-39 Score=360.93 Aligned_cols=218 Identities=23% Similarity=0.409 Sum_probs=184.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCCC--ChHH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~~--~~~~ 981 (1293)
++++||++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++... +...
T Consensus 4 l~~~~v~~~~~~~--~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 4 IEVENLNTYFDDA--HILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEeEEEEeCCe--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 7899999999743 69999999999999999999999999999999999875 4899999999998653 3556
Q ss_pred HhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 982 LRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
+|++++|+||++.+|..|+++|+.+.. .. ++ +.+.++++.+++.+.+. ...+..+..||||||||
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~qr 154 (250)
T PRK14266 82 LRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQQR 154 (250)
T ss_pred HhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHHHH
Confidence 788999999999999889999996421 11 11 22344455555543332 23456677899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
++|||||+++|+||||||||++||+.+.+.+.+.|++...++|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14266 155 LCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFI 234 (250)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999998778999999999999877 99999999999999999999975
Q ss_pred cCC
Q 000774 1133 NEG 1135 (1293)
Q Consensus 1133 ~~~ 1135 (1293)
...
T Consensus 235 ~~~ 237 (250)
T PRK14266 235 NPK 237 (250)
T ss_pred CCC
Confidence 543
No 306
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-39 Score=366.31 Aligned_cols=218 Identities=25% Similarity=0.356 Sum_probs=181.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~~--~~~ 980 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++... +..
T Consensus 39 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~ 116 (286)
T PRK14275 39 HVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEV 116 (286)
T ss_pred EEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchH
Confidence 58999999999653 59999999999999999999999999999999999865 4999999999988643 234
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|++++|+||++.+|..|+++|+.+.. .. .. +.+.++++..++.+ ++.......+..|||||||
T Consensus 117 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 117 LLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred HhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHHHH
Confidence 5688899999999999889999997421 11 11 12223333333211 1223345567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+++.+.+.+.|+++..++|||++||+++.+.. |||+++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999876 9999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
++.
T Consensus 270 ~~~ 272 (286)
T PRK14275 270 TNP 272 (286)
T ss_pred hCC
Confidence 643
No 307
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.7e-39 Score=348.85 Aligned_cols=201 Identities=55% Similarity=0.964 Sum_probs=180.2
Q ss_pred EEEEeeEEEcCCCCC--CCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceeecCcEEEEcCCccccC
Q 000774 285 ISIRNGYFSWDSKAE--RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFN 362 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~--~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~~~~i~~v~Q~~~l~~ 362 (1293)
++++|++++|++..+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++| .+.+.+.|+|++|+|.+|+
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G-~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSG-SVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCC-eEEEcCEEEEEecCchhcc
Confidence 478999999964211 4799999999999999999999999999999999999999999 5667789999999999999
Q ss_pred ccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcC
Q 000774 363 ATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALD 442 (1293)
Q Consensus 363 ~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD 442 (1293)
.|++||+.++...+.++..++.+.+++.+.++.+|.|+++.++..+.+||||||||++|||||+.+|+++||||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999876555566777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-hhcCCcEEEEEecCcchhhhCCeEEEEeCCe
Q 000774 443 AHVGRQVFDRCIR-GELSGKTRVLVTNQLHFLSQVDRIILVHEGM 486 (1293)
Q Consensus 443 ~~~~~~i~~~l~~-~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~ 486 (1293)
+.+.+++++.++. ...+++|+|++||+++.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999886554 3345799999999999998899999999984
No 308
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5e-39 Score=364.00 Aligned_cols=217 Identities=23% Similarity=0.355 Sum_probs=178.1
Q ss_pred cEEEEEEEEEecCC-------CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH
Q 000774 908 SIKFEDVVLRYRPE-------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~-------~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~ 980 (1293)
.|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999621 23699999999999999999999999999999999999999999999999998765555
Q ss_pred HHhhhceEEccccc--cccc-cHhhhcCCC----CCCCH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChh
Q 000774 981 DLRKILGIIPQSPV--LFSG-TVRFNLDPF----SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 1049 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~--lf~~-ti~~nl~~~----~~~~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgG 1049 (1293)
..++.++|+||++. ++.. |+.+|+... ..... +++.++++.+++. .........+||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G 153 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLL----------PDHASYYPHMLAPG 153 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC----------hHHHhcCchhcCHH
Confidence 55678999999985 4443 888887521 11111 2233334443331 12233445689999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecC
Q 000774 1050 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1050 qkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 1126 (1293)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+.. ||++++|++|++++.|+
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998753 7899999999999987 99999999999999999
Q ss_pred hhhhhhcC
Q 000774 1127 PEELLSNE 1134 (1293)
Q Consensus 1127 ~~el~~~~ 1134 (1293)
++++.+..
T Consensus 234 ~~~~~~~~ 241 (267)
T PRK15112 234 TADVLASP 241 (267)
T ss_pred HHHHhcCC
Confidence 99998643
No 309
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2e-38 Score=403.41 Aligned_cols=102 Identities=27% Similarity=0.450 Sum_probs=92.0
Q ss_pred Ccch-hhhcCCCCCChhHHHHHHHHHHhccCC---CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhh
Q 000774 1034 GLDA-QVSEAGENFSVGQRQLLSLSRALLRRS---KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTII 1108 (1293)
Q Consensus 1034 gl~~-~~~~~~~~LSgGqkqrl~lArall~~p---~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~ 1108 (1293)
|++. ..++...+||||||||+.|||+|+++| +++||||||+|||+.+.+.+.+.|+++. .+.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5543 356777899999999999999999999 9999999999999999999999999875 4789999999999998
Q ss_pred ccCEEEEE------eCCeEeeecChhhhhhcCC
Q 000774 1109 DCDRILLL------DSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1109 ~~d~i~vl------~~G~i~~~g~~~el~~~~~ 1135 (1293)
.||+|++| ++|+|++.|+++++.+...
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~ 930 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEA 930 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcc
Confidence 89999999 7999999999999986543
No 310
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6e-39 Score=357.21 Aligned_cols=214 Identities=25% Similarity=0.446 Sum_probs=180.6
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||++.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 4789999999753 69999999999999999999999999999999999999999999999999876543 4678999
Q ss_pred Eccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|.+ |+++|+.+... ...... ...+.+.++.+ ++....+....+|||||+||++||||++++|
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~p 149 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVEP 149 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999976 99999964221 111111 11234455554 3344455566789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
+++||||||++||+.+++.+++.|++... ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 150 QVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999998654 6899999999999876 999999999999999999999753
No 311
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-39 Score=360.09 Aligned_cols=217 Identities=26% Similarity=0.419 Sum_probs=180.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC-----cceEEECCeecCC--CChHH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAK--FGLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~-----~G~I~i~g~~i~~--~~~~~ 981 (1293)
++++||+++|++. ++++|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++.. .+...
T Consensus 5 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T PRK14272 5 LSAQDVNIYYGDK--QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVA 82 (252)
T ss_pred EEEeeeEEEECCE--EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHH
Confidence 7899999999743 6999999999999999999999999999999999999875 8999999999864 33456
Q ss_pred HhhhceEEccccccccc-cHhhhcCCCC---CC-CHHHHHHH----HHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 982 LRKILGIIPQSPVLFSG-TVRFNLDPFS---EH-SDADLWEA----LERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~-ti~~nl~~~~---~~-~~~~~~~~----l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
+|+.++|+||++.+|.. |+.+|+.... .. .+++..+. ++..++.+ ++.........+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 83 MRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWD-------EVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred hhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcch-------hhhhhhcCCcccCCHHHHH
Confidence 78889999999998875 9999996321 11 12222221 22222111 1222334566789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999886 9999999999999999999997
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
...
T Consensus 236 ~~~ 238 (252)
T PRK14272 236 TNP 238 (252)
T ss_pred hCc
Confidence 654
No 312
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-39 Score=360.96 Aligned_cols=218 Identities=23% Similarity=0.336 Sum_probs=184.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCC--ChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~--~~~ 980 (1293)
.+.++++++.|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++... ...
T Consensus 8 ~~~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGNF--MAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 38999999999753 699999999999999999999999999999999999987 799999999998643 334
Q ss_pred HHhhhceEEccccccccccHhhhcCCCCC---C---CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1054 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~---~---~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl 1054 (1293)
.+|+.++|+||++.+|..|+.+|+.+... . ..+++.++++.+++.+.+. ...++...+|||||+||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-------DKLKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHHHHH
Confidence 56788999999999998899999974321 1 1234455555555433222 233456678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEe--------CCeEeeec
Q 000774 1055 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD--------SGRVLEYD 1125 (1293)
Q Consensus 1055 ~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~--------~G~i~~~g 1125 (1293)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++++.. ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999998667899999999999876 99999996 89999999
Q ss_pred ChhhhhhcC
Q 000774 1126 TPEELLSNE 1134 (1293)
Q Consensus 1126 ~~~el~~~~ 1134 (1293)
+++++.+..
T Consensus 239 ~~~~~~~~~ 247 (261)
T PRK14263 239 PTAQIFQNP 247 (261)
T ss_pred CHHHHHhCC
Confidence 999997643
No 313
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-39 Score=358.78 Aligned_cols=214 Identities=26% Similarity=0.408 Sum_probs=178.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++. ++++|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 4689999999753 69999999999999999999999999999999999999999999999999876554 3678999
Q ss_pred Eccccccccc-cHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|.+ |+++|+.+.. ........ ..+.+.++. .|++.........||||||||++||||++.+|
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~-----~~~~~~l~~--~~l~~~~~~~~~~lS~G~~qrl~laral~~~p 149 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIK-----ERVAEALDL--VQLEGYANRKPSQLSGGQQQRVAIARALVNEP 149 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHH--cCCchhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999965 9999986321 11111110 112223333 24445555566789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
++|||||||++||+.+.+.+++.|+++.+ ++|+|++||+++++.. |||+++|++|++++.|+++++.+.
T Consensus 150 ~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 150 KVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 99999999999999999999999998753 7899999999999876 999999999999999999888753
No 314
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-39 Score=325.53 Aligned_cols=195 Identities=25% Similarity=0.453 Sum_probs=173.7
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ec
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 348 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~ 348 (1293)
.|+|+||+++|+. ++++|+||||+|++||++-|+||||||||||+|+|.+...|+.|.... +|
T Consensus 1 mI~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LR 78 (223)
T COG2884 1 MIRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLR 78 (223)
T ss_pred CeeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhh
Confidence 3899999999984 478999999999999999999999999999999999999999984321 46
Q ss_pred CcEEEEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 349 GTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
++||+|+||.-|. +.||+||++|... .. .+++.+++++++|.+....+|. +|||||+||++
T Consensus 79 R~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRva 147 (223)
T COG2884 79 RQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVA 147 (223)
T ss_pred heeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHH
Confidence 6899999999875 7899999998632 12 3567789999999999999994 89999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhC-CeEEEEeCCeEEEec
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV-DRIILVHEGMVKEEG 491 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~-d~i~~l~~G~i~~~g 491 (1293)
||||+..+|++||-||||-+|||.....|++.+.+..+.|.||++.||+.+.++.+ -|++.+++|+++...
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999999999999999986666677899999999999999986 899999999998643
No 315
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=372.72 Aligned_cols=224 Identities=21% Similarity=0.359 Sum_probs=181.2
Q ss_pred EEEEEEEEEecC--CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC----CCcceEEECCeecCCCChHHH
Q 000774 909 IKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE----LERGRILIDGFDIAKFGLMDL 982 (1293)
Q Consensus 909 i~~~~v~~~y~~--~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~----p~~G~I~i~g~~i~~~~~~~~ 982 (1293)
|+++|++++|+. +...+|+||||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|.++.+.+...+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 899999999953 12359999999999999999999999999999999999996 589999999999988877655
Q ss_pred h----hhceEEccccc--ccc-ccHhhhcCCC------CC-C--C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcC
Q 000774 983 R----KILGIIPQSPV--LFS-GTVRFNLDPF------SE-H--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEA 1042 (1293)
Q Consensus 983 r----~~i~~v~Q~~~--lf~-~ti~~nl~~~------~~-~--~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~ 1042 (1293)
+ +.|+||||++. ++. .||.+|+... .. . . ++++.+.++.+++.+. .......
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDH--------KDAMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCCh--------HHHHhCC
Confidence 3 46999999996 333 3888887420 00 0 0 1123333333333210 1234556
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCC
Q 000774 1043 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSG 1119 (1293)
Q Consensus 1043 ~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G 1119 (1293)
+.+||||||||++|||||+.+|+||||||||++||+.+...+.+.|+++.+ +.|+|+||||++.+.. ||||++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 678999999999999999999999999999999999999999999998754 7899999999999976 9999999999
Q ss_pred eEeeecChhhhhhcCCChHHH
Q 000774 1120 RVLEYDTPEELLSNEGSSFSK 1140 (1293)
Q Consensus 1120 ~i~~~g~~~el~~~~~~~~~~ 1140 (1293)
+|++.|+++++.+.....|.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHH
Confidence 999999999998765545554
No 316
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-39 Score=361.50 Aligned_cols=220 Identities=25% Similarity=0.348 Sum_probs=182.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC--------cceEEECCeecCCCChH
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE--------RGRILIDGFDIAKFGLM 980 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~--------~G~I~i~g~~i~~~~~~ 980 (1293)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++...+..
T Consensus 2 l~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 7899999999653 6999999999999999999999999999999999999998 99999999999887777
Q ss_pred HHhhhceEEccccc-cccccHhhhcCCCCC-C-CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 981 DLRKILGIIPQSPV-LFSGTVRFNLDPFSE-H-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~-lf~~ti~~nl~~~~~-~-~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
.+++.++|+||++. +|..|+++|+.+... . .............+.+.++. .|+++..+....+||||||||++||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALAL--AGATALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHH--cCcHhhhcCCcccCCHHHHHHHHHH
Confidence 78888999999986 567799999964211 0 00000000001112333333 2555666677789999999999999
Q ss_pred HHhc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1058 RALL---------RRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1058 rall---------~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
|||+ .+|++|||||||++||+.+.+.+.+.|+++.+ ++|||+|||+++.+.. ||++++|++|++++.|
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g 237 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHG 237 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEec
Confidence 9999 59999999999999999999999999998653 6899999999999875 9999999999999999
Q ss_pred Chhhhhh
Q 000774 1126 TPEELLS 1132 (1293)
Q Consensus 1126 ~~~el~~ 1132 (1293)
+++++.+
T Consensus 238 ~~~~~~~ 244 (272)
T PRK13547 238 APADVLT 244 (272)
T ss_pred CHHHHcC
Confidence 9988864
No 317
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.1e-39 Score=359.91 Aligned_cols=215 Identities=22% Similarity=0.289 Sum_probs=175.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCC--CCCcceEEECCeecCCCChHHH-hhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDL-RKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~--~p~~G~I~i~g~~i~~~~~~~~-r~~ 985 (1293)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|.++...+.... +..
T Consensus 1 l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVEDK--EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECCE--EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 4789999999743 6999999999999999999999999999999999994 7999999999999988776554 445
Q ss_pred ceEEccccccccc-cHhhhcCCCCC----------CCHHHHHHHHHHhhHHHHHHHccCCcch-hhhcCCC-CCChhHHH
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFSE----------HSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGE-NFSVGQRQ 1052 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~~----------~~~~~~~~~l~~~~l~~~i~~lp~gl~~-~~~~~~~-~LSgGqkq 1052 (1293)
++|+||++.+|.+ |+++|+..... ....+.. ..+.+.++.+ |++. ..+.... .|||||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~q 151 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALL--GMDEEFLNRSVNEGFSGGEKK 151 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHc--CCchhhcccccccCcCHHHHH
Confidence 9999999998876 89998853210 0101110 1223344432 4432 2334444 59999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc--cCEEEEEeCCeEeeecChhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID--CDRILLLDSGRVLEYDTPEE 1129 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~--~d~i~vl~~G~i~~~g~~~e 1129 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||+|||+++.+.. ||++++|++|++++.|++++
T Consensus 152 rl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (243)
T TIGR01978 152 RNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVEL 231 (243)
T ss_pred HHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999999999875 36899999999999876 79999999999999999987
Q ss_pred hhh
Q 000774 1130 LLS 1132 (1293)
Q Consensus 1130 l~~ 1132 (1293)
+..
T Consensus 232 ~~~ 234 (243)
T TIGR01978 232 AKE 234 (243)
T ss_pred hcc
Confidence 653
No 318
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.6e-38 Score=354.51 Aligned_cols=220 Identities=31% Similarity=0.536 Sum_probs=189.3
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 352 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i~ 352 (1293)
++++|+++.|+...++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.... .+..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 46899999997433467999999999999999999999999999999999999999984321 123599
Q ss_pred EEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 353 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 353 ~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
|++|++.+++.||+||+.++.. ...++....++.+++.+.++.+|.+..+.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999988899999998643 234455666777788888888998888888888899999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHH
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQK 505 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 505 (1293)
+||||||++||+.+.+++.+.+.... +|+|+|++||+++++..||++++|++|++++.|+.+++......++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 233 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAK 233 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHH
Confidence 99999999999999999988665544 78999999999999988999999999999999999888765444433
No 319
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.6e-38 Score=356.39 Aligned_cols=225 Identities=23% Similarity=0.358 Sum_probs=195.7
Q ss_pred CCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecC
Q 000774 282 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRG 349 (1293)
Q Consensus 282 ~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~ 349 (1293)
.+.|+++|++++|+. ..+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .+.
T Consensus 17 ~~~i~~~~l~~~~~~-~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYEN-NLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCC-CCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 356999999999963 2357999999999999999999999999999999999999999984321 234
Q ss_pred cEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCC
Q 000774 350 TVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 429 (1293)
Q Consensus 350 ~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~ 429 (1293)
.|+|++|++++|+.|++||+........+++..+++..++.+.++.+|.++++.+++.+.+||||||||++|||||+.+|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 69999999999999999999765433455667778888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhc-cHHHHHHHH
Q 000774 430 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN-GELFQKLME 508 (1293)
Q Consensus 430 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~ 508 (1293)
+++||||||++||+.+.+.+++.+.. ..++.|+|++||+++.+..||||++|++|++++.|+++++... .+.+++++.
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~ 254 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVR 254 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHh
Confidence 99999999999999999988875544 4568999999999999988999999999999999999998765 345665553
No 320
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=360.67 Aligned_cols=219 Identities=21% Similarity=0.353 Sum_probs=178.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC---cceEEECCeecCCC-----Ch
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE---RGRILIDGFDIAKF-----GL 979 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~---~G~I~i~g~~i~~~-----~~ 979 (1293)
.++++||+++|++. ++|+|+||++.+||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQH--QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCCe--EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 38999999999743 6999999999999999999999999999999999999986 49999999988653 23
Q ss_pred HHHhhhceEEccccccccc-cHhhhcCCCCC-CCHH-----HHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 980 MDLRKILGIIPQSPVLFSG-TVRFNLDPFSE-HSDA-----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 980 ~~~r~~i~~v~Q~~~lf~~-ti~~nl~~~~~-~~~~-----~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
..+++.++|+||++.+|.. |+++|+.+... ..+. ..........+.+.++.+ |++...+....+|||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~q 159 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQQ 159 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHHH
Confidence 4567889999999998874 99999964211 0000 000000011233444443 4444556667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1129 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 1129 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~ 239 (262)
T PRK09984 160 RVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQ 239 (262)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998753 7899999999998765 99999999999999999998
Q ss_pred h
Q 000774 1130 L 1130 (1293)
Q Consensus 1130 l 1130 (1293)
+
T Consensus 240 ~ 240 (262)
T PRK09984 240 F 240 (262)
T ss_pred h
Confidence 6
No 321
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=360.72 Aligned_cols=218 Identities=27% Similarity=0.420 Sum_probs=182.4
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC-----cceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~-----~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++|++++|++. .+|+|+||++++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+..
T Consensus 7 ~l~~~nl~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~ 84 (261)
T PRK14258 7 AIKVNNLSFYYDTQ--KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLN 84 (261)
T ss_pred eEEEeeEEEEeCCe--eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchH
Confidence 59999999999643 5999999999999999999999999999999999999985 8999999999753 3445
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+|+.++|+||++.+|..|++||+.+.. .. .+ +.+.++++..++.+++ +...++.+.+|||||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~q 157 (261)
T PRK14258 85 RLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-------KHKIHKSALDLSGGQQQ 157 (261)
T ss_pred HhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHHHH
Confidence 6788899999999999899999996421 11 11 2233344444432222 22345667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeC-----CeEeee
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS-----GRVLEY 1124 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~-----G~i~~~ 1124 (1293)
|++|||||+++|++|||||||++||+++.+.+.+.|+++. .++|+|+|||+++++.. ||||++|++ |++++.
T Consensus 158 rv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 237 (261)
T PRK14258 158 RLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEF 237 (261)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEe
Confidence 9999999999999999999999999999999999999854 47999999999999876 999999999 999999
Q ss_pred cChhhhhhcC
Q 000774 1125 DTPEELLSNE 1134 (1293)
Q Consensus 1125 g~~~el~~~~ 1134 (1293)
|+++++...+
T Consensus 238 ~~~~~~~~~~ 247 (261)
T PRK14258 238 GLTKKIFNSP 247 (261)
T ss_pred CCHHHHHhCC
Confidence 9999997643
No 322
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-38 Score=352.86 Aligned_cols=220 Identities=31% Similarity=0.566 Sum_probs=191.0
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 352 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i~ 352 (1293)
++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468999999963 357999999999999999999999999999999999999999984321 123599
Q ss_pred EEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 353 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 353 ~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
|++|++++|+.|++||+.++.. .....+...++.+++.+.+..++.++++.++....+||||||||++|||||+.+|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998743 334456667778888888899999999989889999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccHHHHHHH
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLM 507 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 507 (1293)
+||||||++||+.+.+.+.+.+..... |+|+|++||+++.+..||++++|++|++++.|+.+++......++..+
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHH
Confidence 999999999999999999886655443 899999999999998899999999999999999988877655555443
No 323
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-39 Score=374.96 Aligned_cols=211 Identities=24% Similarity=0.408 Sum_probs=178.4
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC----ChHHHhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMDLRK 984 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~----~~~~~r~ 984 (1293)
|++ |++++|++. .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +....++
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 89999999999999999999999999999999999999999999998642 2334677
Q ss_pred hceEEccccccccc-cHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 985 ILGIIPQSPVLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~-ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+++|+||++.+|.. |+++|+.+... ..++++.+.++.. |++...+....+||||||||++|||||+.
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALL-----------GIEPLLDRYPGSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHc-----------CCchhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 89999999999975 99999975321 1223344444443 44444555667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCC
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 1135 (1293)
+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++..++.
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 9999999999999999999999999998753 6899999999999877 99999999999999999999987543
No 324
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6e-39 Score=371.56 Aligned_cols=204 Identities=26% Similarity=0.400 Sum_probs=172.4
Q ss_pred EEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ec
Q 000774 285 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 348 (1293)
Q Consensus 285 i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~ 348 (1293)
|+++|++++|+.++ .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 357999999999999999999999999999999999999999984321 24
Q ss_pred CcEEEEcCCcccc-CccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 349 GTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
+.|||+||++.+| ..||+||+.++.. .+. ++..+.++..++.+..+..| .+|||||||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 5799999999988 5899999987531 222 34556677777766554433 589999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhh
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
|||||+.+|++||||||||+||+.+.+.+++.+.+...+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 999999999999999999999999999999866654443 8999999999999865 89999999999999999999876
Q ss_pred c
Q 000774 499 N 499 (1293)
Q Consensus 499 ~ 499 (1293)
+
T Consensus 231 ~ 231 (343)
T TIGR02314 231 H 231 (343)
T ss_pred C
Confidence 5
No 325
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-38 Score=353.24 Aligned_cols=217 Identities=33% Similarity=0.544 Sum_probs=188.8
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 352 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i~ 352 (1293)
|+++|++++|+. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .++.++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPG-DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCC-CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 2247999999999999999999999999999999999999999984321 134599
Q ss_pred EEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 353 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 353 ~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
|++|++.+|..|++||+.++.. ....++.+.++.+++.+.++.++.+..+..+....+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998999999998743 344556667778888899999988888888888999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccHHH
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELF 503 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 503 (1293)
+||||||++||+.+.+.+.+.+.+. .+++|+|++||+++.+..||++++|++|++++.|+.+++.+....|
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~ 230 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERL-MKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVY 230 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcch
Confidence 9999999999999999998766544 4689999999999999889999999999999999998887665443
No 326
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-39 Score=358.86 Aligned_cols=206 Identities=23% Similarity=0.340 Sum_probs=172.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +..++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999965 3699999999999999999999999999999999999999999999999998642 246899
Q ss_pred Ecccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|. .|+++|+.+.. .....+. ...+.+.++.+ |++......+.+||||||||++|||||+.+|
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrl~laral~~~p 147 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQR-----LEIAHQMLKKV--GLEGAEKRYIWQLSGGQRQRVGIARALAANP 147 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHH-----HHHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999887 49999986421 1111111 11233444443 4444555667789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEe--CCeEeeecChh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD--SGRVLEYDTPE 1128 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~--~G~i~~~g~~~ 1128 (1293)
++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.+
T Consensus 148 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 148 QLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 9999999999999999999999999863 37999999999999876 99999998 59999988754
No 327
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=9.7e-39 Score=349.93 Aligned_cols=201 Identities=23% Similarity=0.367 Sum_probs=169.9
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++||+++|+. .++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..++.++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 568999999999999999999999999999999999999999999999987543 35778999
Q ss_pred Eccccccccc-cHhhhcCCC-CC-C-----CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 989 IPQSPVLFSG-TVRFNLDPF-SE-H-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~-~~-~-----~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+||++.+|.. |+++|+.+. .. . .+.++.++++..++. ........+||||||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIA-----------DYLDRLPEQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcH-----------HHhhCCcccCCHHHHHHHHHHHHH
Confidence 9999999875 999998631 11 1 122344444444443 334445568999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecC
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 1126 (1293)
+.+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998753 7899999999999876 99999999999998874
No 328
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=365.47 Aligned_cols=219 Identities=27% Similarity=0.466 Sum_probs=182.9
Q ss_pred CccEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-----CCcceEEECCeecCCC--C
Q 000774 906 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--G 978 (1293)
Q Consensus 906 ~g~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-----p~~G~I~i~g~~i~~~--~ 978 (1293)
+..|+++|++++|++. ++|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++... +
T Consensus 43 ~~~l~i~nl~~~~~~~--~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGDD--HALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCCe--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 3458999999999753 69999999999999999999999999999999999986 6899999999998643 3
Q ss_pred hHHHhhhceEEccccccccccHhhhcCCCCCC--------------------CHHHHHHHHHHhhHHHHHHHccCCcchh
Q 000774 979 LMDLRKILGIIPQSPVLFSGTVRFNLDPFSEH--------------------SDADLWEALERAHLKDAIRRNSLGLDAQ 1038 (1293)
Q Consensus 979 ~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~~--------------------~~~~~~~~l~~~~l~~~i~~lp~gl~~~ 1038 (1293)
...+|+.|+|+||++.+|..|+++|+.+.... .++.+.++++.+++ +.++.+.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAAL-------WDEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCC-------chhhhHH
Confidence 45678899999999999988999999742100 01122333333322 1233445
Q ss_pred hhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEE-EEE
Q 000774 1039 VSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRI-LLL 1116 (1293)
Q Consensus 1039 ~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i-~vl 1116 (1293)
.+..+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|+++.++.|+|+|||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56777899999999999999999999999999999999999999999999998777899999999999876 9997 567
Q ss_pred eCCeEeeecChhhhhhc
Q 000774 1117 DSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1117 ~~G~i~~~g~~~el~~~ 1133 (1293)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999998754
No 329
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-39 Score=335.12 Aligned_cols=202 Identities=26% Similarity=0.441 Sum_probs=172.0
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------e
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------I 347 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~ 347 (1293)
..|+++|++..||+ ++.+|+||||+|++||+++|+|+|||||||||++|.|+.+|++|.... +
T Consensus 2 ~~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~ 79 (258)
T COG3638 2 MMIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKL 79 (258)
T ss_pred ceEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHH
Confidence 36899999999973 678999999999999999999999999999999999999999984321 3
Q ss_pred cCcEEEEcCCcccc-CccHHHHHccCCC------------CCHH---HHHHHHHHcCChhHHhcCCCCCcccccCCCCCC
Q 000774 348 RGTVAYVPQVSWIF-NATVRDNILFGSA------------FEPA---RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNI 411 (1293)
Q Consensus 348 ~~~i~~v~Q~~~l~-~~Tv~eni~~g~~------------~~~~---~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~L 411 (1293)
|.+|||++|++.|. ..||.+|++.|.- ++.+ ...++++..++.+..- .+..+|
T Consensus 80 r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~L 148 (258)
T COG3638 80 RRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTL 148 (258)
T ss_pred HHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccC
Confidence 45799999999985 7899999988742 2222 2344566666654432 244689
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEE
Q 000774 412 SGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKE 489 (1293)
Q Consensus 412 SGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~-~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~ 489 (1293)
||||+|||+|||||+++|+++|-|||+|+|||.+.+.+++.+.+. ...|.|+|+.-|+++... +||||+-|++|+|++
T Consensus 149 SGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivf 228 (258)
T COG3638 149 SGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVF 228 (258)
T ss_pred CcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEE
Confidence 999999999999999999999999999999999999999987764 456899999999999976 589999999999999
Q ss_pred ecChHHHh
Q 000774 490 EGTFEDLS 497 (1293)
Q Consensus 490 ~g~~~~l~ 497 (1293)
.|+.+++.
T Consensus 229 Dg~~~el~ 236 (258)
T COG3638 229 DGPASELT 236 (258)
T ss_pred eCChhhhh
Confidence 99999864
No 330
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=358.38 Aligned_cols=218 Identities=23% Similarity=0.372 Sum_probs=180.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC--C---CcceEEECCeecCC--CChH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAK--FGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~--p---~~G~I~i~g~~i~~--~~~~ 980 (1293)
.|+++||+++|+. +++|+|+||+|.+||++||+||||||||||+++|+|+++ | ++|+|.++|.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 3899999999974 369999999999999999999999999999999999975 5 59999999999864 2344
Q ss_pred HHhhhceEEccccccccccHhhhcCCCC---CC-CH----HHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~-~~----~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
.+++.++|+||++.+|..|+++|+.+.. .. .+ +++.++++.+++.+ ++.........+|||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWD-------EVKDHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCcc-------chhhHHhcCcccCCHHHHH
Confidence 5678899999999999889999986321 11 11 12222333333211 2233455667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988667899999999999876 9999999999999999999987
Q ss_pred hcC
Q 000774 1132 SNE 1134 (1293)
Q Consensus 1132 ~~~ 1134 (1293)
...
T Consensus 236 ~~~ 238 (252)
T PRK14255 236 LNP 238 (252)
T ss_pred cCC
Confidence 543
No 331
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=357.20 Aligned_cols=219 Identities=26% Similarity=0.452 Sum_probs=181.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECC------eecCCCChHH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDG------FDIAKFGLMD 981 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g------~~i~~~~~~~ 981 (1293)
.+.++|++++|++. ++|+|+||++.+||++||+||||||||||+++|+|+++|++|+|.++| .++...+...
T Consensus 10 ~i~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYINDK--AILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCCc--eeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 48999999999753 699999999999999999999999999999999999999997666665 6666666777
Q ss_pred HhhhceEEccccccccc-cHhhhcCCCC---CC-CHHHH----HHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 000774 982 LRKILGIIPQSPVLFSG-TVRFNLDPFS---EH-SDADL----WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1052 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~-ti~~nl~~~~---~~-~~~~~----~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkq 1052 (1293)
+|+.++|+||++.+|.+ |+++|+.+.. .. .+++. .++++..++.+.+ ....+..+..|||||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHHH
Confidence 88899999999999875 9999997421 11 12222 2223332221111 12345567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1053 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1053 rl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|++||||++.+|++|||||||++||+.+++.+.+.|.++..++|+|+|||+++++.. ||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999988667999999999999965 9999999999999999999998
Q ss_pred hcCC
Q 000774 1132 SNEG 1135 (1293)
Q Consensus 1132 ~~~~ 1135 (1293)
+...
T Consensus 241 ~~~~ 244 (257)
T PRK14246 241 TSPK 244 (257)
T ss_pred hCCC
Confidence 6543
No 332
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-38 Score=351.14 Aligned_cols=213 Identities=29% Similarity=0.510 Sum_probs=187.5
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.|+++|++++|+. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4889999999962 357999999999999999999999999999999999999999984321 13459
Q ss_pred EEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCC
Q 000774 352 AYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 430 (1293)
Q Consensus 352 ~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~ 430 (1293)
+|++|++.+|..|++||+.++.. ....++.++++.+++.+.++.+|.++.+.++....+||||||||++|||||+.+|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998899999998753 33456677788889999999999888888888899999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhc
Q 000774 431 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 431 illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
++||||||++||+.+.+++.+.+... .+++|+|+|||+++.+..||++++|++|++++.|+.+++..+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKL-MKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999998866544 468999999999999988999999999999999988877543
No 333
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-38 Score=353.30 Aligned_cols=213 Identities=27% Similarity=0.451 Sum_probs=177.7
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++ ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 468999999964 38999999999999999999999999999999999999999999999999876554 3678999
Q ss_pred Ecccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|. .|+++|+.+.. ..+..+.. ..+.+.++. .|+.........+||||||||++||||++++|
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 148 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIE-----RKVLEIAEM--LGIDHLLNRKPETLSGGEQQRVAIARALVVNP 148 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHH--cCChhHHhcCcccCCHHHHHHHHHHHHHHcCC
Confidence 999999885 59999996321 11111111 112223333 24444455566789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhc
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1133 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 1133 (1293)
++|+|||||++||+.+.+.+++.|++... ++|+|++||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 149 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 149 KILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 99999999999999999999999998653 7999999999999876 999999999999999999988754
No 334
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-38 Score=332.81 Aligned_cols=206 Identities=28% Similarity=0.402 Sum_probs=172.5
Q ss_pred CcEEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ec
Q 000774 283 PAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IR 348 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~ 348 (1293)
..++++|+++.|+.+. ..++|+||||+|.+||++||||+||||||||+++|+|+.+|++|.+.. ..
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 3589999999997421 115999999999999999999999999999999999999999984322 13
Q ss_pred CcEEEEcCCccc---cCccHHHHHccCC-----CCCHHHHHHHHHHcCChh-HHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 349 GTVAYVPQVSWI---FNATVRDNILFGS-----AFEPARYEKAIDVTSLQH-DLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 349 ~~i~~v~Q~~~l---~~~Tv~eni~~g~-----~~~~~~~~~~~~~~~l~~-~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
+.|-+|+|||.- ..-||++-|.-+. +....++.++++.+++.. +++..| .+|||||||||
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRi 150 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRI 150 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHH
Confidence 469999999974 3568888876331 112355788888898865 455666 48999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHh
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
||||||..+|++||||||||+||+.....|++.+.+.. ..+-|.|+||||+..+.+ ||||+||++|++++.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 99999999999999999999999999999998666543 346799999999999986 8999999999999999999988
Q ss_pred hc
Q 000774 498 NN 499 (1293)
Q Consensus 498 ~~ 499 (1293)
+.
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 76
No 335
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-38 Score=335.41 Aligned_cols=171 Identities=50% Similarity=0.798 Sum_probs=159.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++...++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 46899999997542369999999999999999999999999999999999999999999999999988777788889999
Q ss_pred EccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000774 989 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1068 (1293)
Q Consensus 989 v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLl 1068 (1293)
+||++.+|+.|+.||+ ||||||||++||||++.+|++||
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999988998876 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCCe
Q 000774 1069 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGR 1120 (1293)
Q Consensus 1069 LDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~ 1120 (1293)
|||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998876799999999999997899999999985
No 336
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.2e-38 Score=348.16 Aligned_cols=207 Identities=27% Similarity=0.418 Sum_probs=184.8
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.++++|++++|+. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..+
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRP-NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCC-CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 3789999999973 2357999999999999999999999999999999999999999984321 23469
Q ss_pred EEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 352 AYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 352 ~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
+|++|++.+++.|++||+.+......+++.++++..++.+.+..+|.|+.+..+..+.+||||||||++|||||+.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999998999999987655566777888888999999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecC
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 492 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 492 (1293)
+||||||++||+.+++++.+.+.+. .+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREA-FKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999999998866543 45789999999999998899999999999998775
No 337
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-38 Score=363.32 Aligned_cols=211 Identities=23% Similarity=0.403 Sum_probs=172.5
Q ss_pred CCCcEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------
Q 000774 281 GLPAISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------ 346 (1293)
Q Consensus 281 ~~~~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------ 346 (1293)
+.+.|+++|++|+|+... ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|.+..
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 345799999999997421 247999999999999999999999999999999999999999884211
Q ss_pred ----------------ecCcEEEEcCCc--cccCccHHHHHccCCC---CCHH----HHHHHHHHcCChhHHhcCCCCCc
Q 000774 347 ----------------IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDV 401 (1293)
Q Consensus 347 ----------------~~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~ 401 (1293)
.++.|+||+|+| ++|+.||+|||.++.. .+.+ ++.+.++..++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------- 167 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD---------- 167 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------
Confidence 134699999998 6888899999998732 2222 2233334443321
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEE
Q 000774 402 TEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRII 480 (1293)
Q Consensus 402 t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~ 480 (1293)
...+..+.+||||||||++|||||+.+|++|||||||++||+.+++++.+.+.....+|+|+|+|||+++++. .||+|+
T Consensus 168 ~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~ 247 (320)
T PRK13631 168 SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVI 247 (320)
T ss_pred hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEE
Confidence 1245567899999999999999999999999999999999999999999876555456899999999999875 699999
Q ss_pred EEeCCeEEEecChHHHhhccH
Q 000774 481 LVHEGMVKEEGTFEDLSNNGE 501 (1293)
Q Consensus 481 ~l~~G~i~~~g~~~~l~~~~~ 501 (1293)
+|++|++++.|+++++.....
T Consensus 248 vl~~G~i~~~g~~~~~~~~~~ 268 (320)
T PRK13631 248 VMDKGKILKTGTPYEIFTDQH 268 (320)
T ss_pred EEECCEEEEeCCHHHHhcCHH
Confidence 999999999999999876543
No 338
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.8e-38 Score=348.96 Aligned_cols=204 Identities=25% Similarity=0.402 Sum_probs=173.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++||+++|++. ++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ++.++|
T Consensus 1 l~l~~v~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGKQ--TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECCE--EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 4689999999753 6999999999999999999999999999999999999999999999999875321 357999
Q ss_pred Ecccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+||++.+|. .|+++|+.+.. ...+.++.++++..++ +........+||||||||++||||++.+|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDL-----------TNTGKKKAKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCC-----------cHHHhhhHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 59999986321 2223344444444443 33344455789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1129 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 1129 (1293)
++|||||||++||+.+.+.+++.|++.. .++|+|++||+++.+.. ||||++|++|++++.|++++
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999875 47899999999999866 99999999999999998764
No 339
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-38 Score=352.90 Aligned_cols=201 Identities=28% Similarity=0.436 Sum_probs=166.5
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ecC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 349 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~~ 349 (1293)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 46899999996 357999999999999999999999999999999999999999884211 234
Q ss_pred cEEEEcCCccccC-ccHHHHHccCCC----CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 350 TVAYVPQVSWIFN-ATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 350 ~i~~v~Q~~~l~~-~Tv~eni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
.|+|++|++.+|. .||+||+.++.. .+. +++.++++..++.+..+ ....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAED-----------LYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHH
Confidence 6999999998885 599999987521 122 23444566666544332 334589999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhh
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
|||||+.+|+++||||||++||+.+.+.+++.+.+... .|+|+|+|||+++++.. ||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999987655444 38999999999998865 89999999999999999988765
Q ss_pred c
Q 000774 499 N 499 (1293)
Q Consensus 499 ~ 499 (1293)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 4
No 340
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-38 Score=335.88 Aligned_cols=172 Identities=32% Similarity=0.518 Sum_probs=158.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC--hHHHhhhc
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLRKIL 986 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~--~~~~r~~i 986 (1293)
|+++|++++|++. ++++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ....++.+
T Consensus 1 i~~~~l~~~~~~~--~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQK--TVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECCe--EEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 4689999999653 6999999999999999999999999999999999999999999999999998765 56678899
Q ss_pred eEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
+|+||++.+|.. |+++|+... ||||||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998642 99999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCe
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGR 1120 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~ 1120 (1293)
++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||++++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998754 5899999999999986 99999999985
No 341
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.8e-38 Score=354.72 Aligned_cols=218 Identities=23% Similarity=0.384 Sum_probs=180.1
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCee-----cCCCChHHH
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD-----IAKFGLMDL 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~-----i~~~~~~~~ 982 (1293)
.|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+ +...+....
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGGG--KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCCc--eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 38999999999753 58999999999999999999999999999999999999999999999987 666665432
Q ss_pred ----hhhceEEccccc--cc-cccHhhhcCC----CCCCCHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCCCCChhH
Q 000774 983 ----RKILGIIPQSPV--LF-SGTVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 1050 (1293)
Q Consensus 983 ----r~~i~~v~Q~~~--lf-~~ti~~nl~~----~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~~LSgGq 1050 (1293)
++.++|+||++. ++ ..|+.+|+.. .......+ ....+.++++.+ |++ +..+..+..|||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~l~~l--~l~~~~~~~~~~~LSgG~ 153 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGN-----IRAAAHDWLEEV--EIDPTRIDDLPRAFSGGM 153 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHH-----HHHHHHHHHHHc--CCChhhhhcCchhcCHHH
Confidence 457999999985 22 3477777632 11100111 112345666665 443 46677788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecCh
Q 000774 1051 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1127 (1293)
Q Consensus 1051 kqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 1127 (1293)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 154 ~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~ 233 (253)
T TIGR02323 154 QQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLT 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999988643 7899999999999986 999999999999999999
Q ss_pred hhhhhcC
Q 000774 1128 EELLSNE 1134 (1293)
Q Consensus 1128 ~el~~~~ 1134 (1293)
+++....
T Consensus 234 ~~~~~~~ 240 (253)
T TIGR02323 234 DQVLDDP 240 (253)
T ss_pred HHHhcCC
Confidence 9987543
No 342
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=5.6e-38 Score=355.42 Aligned_cols=227 Identities=24% Similarity=0.370 Sum_probs=185.2
Q ss_pred EEEEEEEEEecC-------CCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH-
Q 000774 909 IKFEDVVLRYRP-------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM- 980 (1293)
Q Consensus 909 i~~~~v~~~y~~-------~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~- 980 (1293)
|+++||+++|+. ..+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 899999999973 124699999999999999999999999999999999999999999999999998876653
Q ss_pred --HHhhhceEEccccc--ccc-ccHhhhcCCCC-CCCHHHHHHHHHHhhHHHHHHHccCCcch-hhhcCCCCCChhHHHH
Q 000774 981 --DLRKILGIIPQSPV--LFS-GTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 981 --~~r~~i~~v~Q~~~--lf~-~ti~~nl~~~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~-~~~~~~~~LSgGqkqr 1053 (1293)
.+|+.++|+||++. ++. .|+.+|+.+.. ...+ +........+.+.++.+ |+++ ..+..+..||||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~qr 159 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQR 159 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHHH
Confidence 46788999999983 443 58999874210 0000 00111122345555553 6653 4567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 l~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 239 (268)
T PRK10419 160 VCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDK 239 (268)
T ss_pred HHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhc
Confidence 9999999999999999999999999999999999998753 7899999999999986 999999999999999999998
Q ss_pred hhcCCChHHH
Q 000774 1131 LSNEGSSFSK 1140 (1293)
Q Consensus 1131 ~~~~~~~~~~ 1140 (1293)
.. .+..|..
T Consensus 240 ~~-~~~~~~~ 248 (268)
T PRK10419 240 LT-FSSPAGR 248 (268)
T ss_pred cC-CCCHHHH
Confidence 75 3444443
No 343
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.9e-38 Score=370.68 Aligned_cols=212 Identities=24% Similarity=0.375 Sum_probs=177.4
Q ss_pred EEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCC----hHHHhhhceE
Q 000774 913 DVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG----LMDLRKILGI 988 (1293)
Q Consensus 913 ~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~----~~~~r~~i~~ 988 (1293)
|++++|++. .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ....|+.++|
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999653 35 999999999999999999999999999999999999999999999986532 2346778999
Q ss_pred Eccccccccc-cHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
+||++.+|.. |+++|+.+... ....+. ...+.+.++.+ |++...+..+.+||||||||++|||||+.+|++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~l 152 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELL--GIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRL 152 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 9999999975 99999975321 111110 11233444443 555666677788999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcCC
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1135 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 1135 (1293)
|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++.....
T Consensus 153 llLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (354)
T TIGR02142 153 LLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPD 224 (354)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcC
Confidence 999999999999999999999998753 6899999999999876 99999999999999999999986544
No 344
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.5e-38 Score=353.94 Aligned_cols=214 Identities=25% Similarity=0.394 Sum_probs=174.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC----CcceEEECCeecCCCChHHHh
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL----ERGRILIDGFDIAKFGLMDLR 983 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p----~~G~I~i~g~~i~~~~~~~~r 983 (1293)
.++++|++++| + .++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++... ...+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 48999999999 3 2699999999999999999999999999999999999999 999999999998632 2234
Q ss_pred hhceEEccccc-ccc--ccHhhhcCC----CC-CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 984 KILGIIPQSPV-LFS--GTVRFNLDP----FS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 984 ~~i~~v~Q~~~-lf~--~ti~~nl~~----~~-~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+.++|+||++. .|. .|+.+|+.. .. ...++++.+.++..++.+ .++.++..+.+||||||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--------~~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLEN--------AARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCC--------hhhhhhcCCcccCHHHHHHHH
Confidence 67999999985 343 377776532 11 112233444444433321 112456677889999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+.. |||+++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998653 6899999999999866 99999999999999999999976
Q ss_pred cC
Q 000774 1133 NE 1134 (1293)
Q Consensus 1133 ~~ 1134 (1293)
..
T Consensus 231 ~~ 232 (254)
T PRK10418 231 AP 232 (254)
T ss_pred CC
Confidence 54
No 345
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=322.37 Aligned_cols=212 Identities=27% Similarity=0.441 Sum_probs=184.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+.+|++++-.++ .+|++|||+++|||++||+||||||||||+|.|+|.+.|++|++.++|.++..+++.++-++-++
T Consensus 2 i~a~nls~~~~Gr--~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLAGR--RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEeecc--eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 7889999987654 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccccc-ccccHhhhcCCCC-------CCCHHH--HHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 989 IPQSPVL-FSGTVRFNLDPFS-------EHSDAD--LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 989 v~Q~~~l-f~~ti~~nl~~~~-------~~~~~~--~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
+||+..+ |.-|++|-+.+.. +..+++ ..+++.++++..+-.+ .-..||||||||+.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R-----------~y~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGR-----------DYRTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhcc-----------chhhcCchHHHHHHHHH
Confidence 9999975 7789999775322 111233 5667777777665443 23469999999999999
Q ss_pred Hhcc------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhh
Q 000774 1059 ALLR------RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1059 all~------~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 1130 (1293)
.|.. ++++|+||||||+||+.....+.+..+++. .++.|+.|-||++.... ||||++|.+||++..|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9985 346999999999999999999999999976 47899999999999766 999999999999999999999
Q ss_pred hhc
Q 000774 1131 LSN 1133 (1293)
Q Consensus 1131 ~~~ 1133 (1293)
+..
T Consensus 229 lt~ 231 (259)
T COG4559 229 LTD 231 (259)
T ss_pred cCH
Confidence 853
No 346
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.8e-38 Score=348.02 Aligned_cols=206 Identities=25% Similarity=0.396 Sum_probs=172.2
Q ss_pred EEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH---HHh
Q 000774 909 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~---~~r 983 (1293)
++++|+++.|++. ..++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...++. ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999999642 14699999999999999999999999999999999999999999999999998776643 357
Q ss_pred hhceEEcccccccc-ccHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 984 KILGIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~-~ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
+.++|+||++.+|. .|+.+|+.+.. ....++..+ .+.+.++.+ |++......+.+||||||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrv~lar 154 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAV--GLGDHLDYYPHNLSGGQKQRVAIAR 154 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 88999999999987 59999986422 112211111 123344443 4555556666789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhccCEEEEEeCCeE
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i 1121 (1293)
||+.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++....||+|++|++|++
T Consensus 155 al~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 155 ALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999998753 7999999999997666999999999986
No 347
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-38 Score=333.58 Aligned_cols=170 Identities=31% Similarity=0.575 Sum_probs=156.4
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..+|+.++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 4689999999753 6999999999999999999999999999999999999999999999999987655 567788999
Q ss_pred Eccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1067 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iL 1067 (1293)
+||++.+|.+ |+++|+. ||||||||++|||||+.+|++|
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999988876 9998862 9999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeE
Q 000774 1068 VLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1121 (1293)
Q Consensus 1068 lLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 1121 (1293)
||||||++||+.+.+.+.+.|++.. ++.|+|++||+.+++.. ||++++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999875 46899999999999885 999999999974
No 348
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-38 Score=366.93 Aligned_cols=203 Identities=28% Similarity=0.420 Sum_probs=173.5
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 353 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~ 353 (1293)
.|+++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|.... .++.|||
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4899999999942 367999999999999999999999999999999999999999984321 1246999
Q ss_pred EcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
|+|++.+| +.||+|||.|+.. .+ .+++.++++..++.+..+..| .+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 99999998 5799999998742 12 234566777788876665555 58999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
+.+|++||||||||+||+.+++++.+.+.+...+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++.++
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999998876654443 899999999998875 5899999999999999999998765
No 349
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=5.5e-37 Score=403.44 Aligned_cols=210 Identities=24% Similarity=0.324 Sum_probs=149.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHH---------HHhcCCCCCcc--------eEEEC
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLN---------TLFRIVELERG--------RILID 970 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~---------~l~g~~~p~~G--------~I~i~ 970 (1293)
.++++|++. ..|+|+||+|++||++||.|+||||||||++ .|.|...|..+ -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 378888752 3699999999999999999999999999999 55665333111 23455
Q ss_pred CeecCCCCh----H------HHh---------hhce-----EEccc------------------c---------------
Q 000774 971 GFDIAKFGL----M------DLR---------KILG-----IIPQS------------------P--------------- 993 (1293)
Q Consensus 971 g~~i~~~~~----~------~~r---------~~i~-----~v~Q~------------------~--------------- 993 (1293)
-.++..-+. . .+| ++.| +.++. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 444432111 1 333 1222 22332 0
Q ss_pred -----ccccc-cHhhhcCCCCC-C-----CHHHHHHHHHHhhHHHHHHHccCCcchh-hhcCCCCCChhHHHHHHHHHHh
Q 000774 994 -----VLFSG-TVRFNLDPFSE-H-----SDADLWEALERAHLKDAIRRNSLGLDAQ-VSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 994 -----~lf~~-ti~~nl~~~~~-~-----~~~~~~~~l~~~~l~~~i~~lp~gl~~~-~~~~~~~LSgGqkqrl~lAral 1060 (1293)
..+.+ ||.|+|.+... . ...++.+. + +.++. .|++.. .++...+||||||||++|||||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~-----l-~~L~~--vGL~~l~l~q~~~tLSGGE~QRV~LAraL 824 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEK-----I-HALCS--LGLDYLPLGRPLSSLSGGEIQRLKLAYEL 824 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHH-----H-HHHHH--cCCcchhhcCccccCCHHHHHHHHHHHHH
Confidence 12333 66666653210 0 01111111 1 23333 366654 6778889999999999999999
Q ss_pred c---cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhccCEEEEEe------CCeEeeecChhhh
Q 000774 1061 L---RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLD------SGRVLEYDTPEEL 1130 (1293)
Q Consensus 1061 l---~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~------~G~i~~~g~~~el 1130 (1293)
+ .+|++|||||||++||+.+.+.+.+.|+++. .+.|||+|||+++.+..||+|++|. +|++++.|+|+++
T Consensus 825 ~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel 904 (1809)
T PRK00635 825 LAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEEL 904 (1809)
T ss_pred hhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHH
Confidence 8 6999999999999999999999999999875 4789999999999996799999996 7999999999999
Q ss_pred hh
Q 000774 1131 LS 1132 (1293)
Q Consensus 1131 ~~ 1132 (1293)
..
T Consensus 905 ~~ 906 (1809)
T PRK00635 905 IH 906 (1809)
T ss_pred Hh
Confidence 75
No 350
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.5e-37 Score=342.63 Aligned_cols=206 Identities=34% Similarity=0.574 Sum_probs=179.9
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.++++|+++.|+. .++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|.... .+..+
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPN-QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCC-CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 4789999999963 2357999999999999999999999999999999999999999884321 12369
Q ss_pred EEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCC
Q 000774 352 AYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 430 (1293)
Q Consensus 352 ~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~ 430 (1293)
+|++|++.++..|+.||+.++.. ....++.+.++..++.+.++..|.+++|.+.....+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999988899999987643 34456677888889999899999999999888889999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEec
Q 000774 431 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEG 491 (1293)
Q Consensus 431 illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g 491 (1293)
++||||||++||+.+.+.+++.+.+.. +++|+|++||+++++..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLL-GDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999988665543 348999999999998889999999999988654
No 351
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-38 Score=344.40 Aligned_cols=201 Identities=24% Similarity=0.380 Sum_probs=168.0
Q ss_pred EEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCC----ChHHHhhhceE
Q 000774 913 DVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMDLRKILGI 988 (1293)
Q Consensus 913 ~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~----~~~~~r~~i~~ 988 (1293)
||+++|++. .+ |+||+|++ |++||+||||||||||+++|+|+++|++|+|.++|.++... +....++.++|
T Consensus 5 ~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 79 (214)
T cd03297 5 DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGL 79 (214)
T ss_pred eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEE
Confidence 899999763 34 99999999 99999999999999999999999999999999999988642 23346778999
Q ss_pred Ecccccccc-ccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 989 IPQSPVLFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
+||++.+|. .|+++|+.+... .... .....+.++++.+ |++......+.+||||||||++||||++.+|++
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~~~-----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 152 (214)
T cd03297 80 VFQQYALFPHLNVRENLAFGLKRKRNR-----EDRISVDELLDLL--GLDHLLNRYPAQLSGGEKQRVALARALAAQPEL 152 (214)
T ss_pred EecCCccCCCCCHHHHHHHHHhhCCHH-----HHHHHHHHHHHHc--CCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 499999864321 1111 1112234455553 566666777789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 153 LLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999998753 7899999999999876 9999999999998765
No 352
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.1e-38 Score=348.23 Aligned_cols=212 Identities=25% Similarity=0.386 Sum_probs=171.1
Q ss_pred EEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC---CCcceEEECCeecCCCChHHHh
Q 000774 909 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~---p~~G~I~i~g~~i~~~~~~~~r 983 (1293)
+.++||+++|++. .+++++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++. ....|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999764 2579999999999999999999999999999999999999 99999999999875 34578
Q ss_pred hhceEEccccccccc-cHhhhcCCCCCC-CHHHHHHHHHHhhHHH-HHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 984 KILGIIPQSPVLFSG-TVRFNLDPFSEH-SDADLWEALERAHLKD-AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~~-ti~~nl~~~~~~-~~~~~~~~l~~~~l~~-~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
+.++|+||++.+|.+ |+++|+.+.... ......+........+ .++. .++..........||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRD--LALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHh--hcchhhhcccccCcCHHHHHHHHHHHHH
Confidence 889999999999987 999999742110 0000001111111122 2332 2444445566778999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCc-chhhc-cCEEEEEeCCeEeeec
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRL-NTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~-~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
+.+|++|||||||++||+.+...+.+.|++.. .+.|+|++||++ +.+.. ||++++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999865 468999999998 46655 9999999999998865
No 353
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=7.6e-38 Score=350.16 Aligned_cols=200 Identities=29% Similarity=0.450 Sum_probs=171.8
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQR--RVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECCc--eEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 38999999999753 699999999999999999999999999999999999999999999986 24699
Q ss_pred EEcccccccc---ccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 988 IIPQSPVLFS---GTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 988 ~v~Q~~~lf~---~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
|+||++.++. .|+++|+.......++++.++++..++.+.+ ......||||||||++|||||+.+|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLI-----------DAPMQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHH-----------hCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998764 3788887543333455566666666655443 3345689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
++|||||||++||+.+.+.+++.|+++.+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++..
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~ 209 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL 209 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC
Confidence 99999999999999999999999988653 7899999999999866 999999965 7999999999864
No 354
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-38 Score=364.62 Aligned_cols=203 Identities=26% Similarity=0.384 Sum_probs=172.2
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVA 352 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~ 352 (1293)
..|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .++.||
T Consensus 5 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 5 NFVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred cEEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4699999999996 357999999999999999999999999999999999999999984321 134699
Q ss_pred EEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
||+|++.+| ..||+|||.|+.. .+ .+++.++++..++.+..+.. ..+|||||||||+||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHH
Confidence 999999998 5799999998732 12 23455667777776554433 35899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|+.+|++||||||||+||+.+++++.+.+.+... .|.|+|+|||+++++. .||+|++|++|+++..|+++++..+
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999886655433 3899999999999875 5899999999999999999998765
No 355
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-38 Score=355.99 Aligned_cols=206 Identities=27% Similarity=0.401 Sum_probs=173.2
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.++++|++++|+....+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 589999999997432356999999999999999999999999999999999999999984311 23469
Q ss_pred EEEcCCcc--ccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~~--l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
||++|+|. ++..||+|||.++.. .+. +++.++++..++.+..+..+ .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 99999984 467899999998732 222 34566777777766555433 58999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
|||+.+|++|||||||++||+.+.+.+.+.+.....+ |+|+|+|||+++.+..||+|++|++|+++..|+++++....
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 9999999999999999999999999998866554443 89999999999998889999999999999999998887654
No 356
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1e-37 Score=337.95 Aligned_cols=185 Identities=25% Similarity=0.379 Sum_probs=162.8
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcC--CCCCcceEEECCeecCCCChHHH-hhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI--VELERGRILIDGFDIAKFGLMDL-RKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~--~~p~~G~I~i~g~~i~~~~~~~~-r~~ 985 (1293)
++++|++++|++. ++++|+||++++||++||+|+||||||||+++|+|+ ++|++|+|.++|.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGGK--EILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCCE--EeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 4689999999743 699999999999999999999999999999999999 58999999999999988776554 456
Q ss_pred ceEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
++|+||++.+|.+ |+++++ . ....+||||||||++||||++.+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l------------------------~-----------~~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFL------------------------R-----------YVNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHH------------------------h-----------hccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999998875 565544 0 012469999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhh--ccCEEEEEeCCeEeeecChhhhh
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTII--DCDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~--~~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
++|||||||++||+.+.+.+++.|++..+ ++|+|++||+++.+. .||++++|++|++++.| +.|+.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999998754 789999999999988 59999999999999999 55554
No 357
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-38 Score=344.02 Aligned_cols=228 Identities=25% Similarity=0.445 Sum_probs=185.1
Q ss_pred EEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC-C----CcceEEECCeecCCCChHH
Q 000774 909 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-L----ERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 909 i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~-p----~~G~I~i~g~~i~~~~~~~ 981 (1293)
++++|++..|... ...+++||||+|++||++||||.|||||||+.++|+|+++ | .+|+|.++|.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 6889999999643 2368999999999999999999999999999999999998 4 5799999999999999875
Q ss_pred Hhh----hceEEccccc-cccc--cHhhhcC----CCCCC-C----HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCC
Q 000774 982 LRK----ILGIIPQSPV-LFSG--TVRFNLD----PFSEH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1045 (1293)
Q Consensus 982 ~r~----~i~~v~Q~~~-lf~~--ti~~nl~----~~~~~-~----~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~ 1045 (1293)
+|+ .|++|||+|. -++- ||.+.+. ..... + .++..+.++.+++.+ .+..+..-+.+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~--------~~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPD--------PERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCC--------HHHHHhhCCcc
Confidence 433 5999999994 2332 5554432 11111 1 123444444444422 22345666789
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEe
Q 000774 1046 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVL 1122 (1293)
Q Consensus 1046 LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~ 1122 (1293)
||||||||+.||-||+.+|++||.||||++||..+.+.|.+.|+++.+ +.|+|+||||+..+.. ||||+||..|+|+
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 999999999999999999999999999999999999999999998764 7999999999999877 9999999999999
Q ss_pred eecChhhhhhcCCChHHHHHHh
Q 000774 1123 EYDTPEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1123 ~~g~~~el~~~~~~~~~~l~~~ 1144 (1293)
|.|+.+++..++...|.+..-+
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll~ 255 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLLN 255 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHHH
Confidence 9999999998877777755443
No 358
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.9e-35 Score=346.35 Aligned_cols=468 Identities=19% Similarity=0.199 Sum_probs=309.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccc-----hhHHHHHhcchhhHHHHHHH
Q 000774 626 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPL-----GRIINRFAKDLGDIDRNVAV 700 (1293)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~ff~~~~~-----G~il~rls~Di~~id~~~~~ 700 (1293)
...+|..++.+.+++.....++......+.-.-+-+.++++.+.....|+..... -..=+|+..|+...-.....
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 3445666677777777778888888888888888888999988877444333221 23456888888887766555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Q 000774 701 FVNMFMGQVSQLLSTFVLIGIV---------------STMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQ 765 (1293)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (1293)
....++.++.++++...+..-. ..++.++++..++....+...+.+....+........+.+...
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 5555666555554444333311 1222222222222222222233333233333333334455556
Q ss_pred HHHHHccHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhh
Q 000774 766 FGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANR---WLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAF 842 (1293)
Q Consensus 766 ~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (1293)
+...-++...|-.|+.|+......++..+...+.......... |.+.....++.++-++. ....+..+..+
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li-~ap~~f~g~i~----- 321 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILI-AAPRYFSGQIT----- 321 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHh-ccHhhhcCcCh-----
Confidence 6667778888888988876666555555444433222222222 22222222222111111 11113334433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC------CCCCccccCCCCCCCCCCCCccEEEEEEEE
Q 000774 843 ASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL------PSEAPLVIESNRPPPGWPSSGSIKFEDVVL 916 (1293)
Q Consensus 843 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Rl~~~~~~------~~e~~~~~~~~~~~~~~~~~g~i~~~~v~~ 916 (1293)
.+.+.........+...+.++...+..+........|+.++.+. +.+.+.... .........+..|+++|++.
T Consensus 322 ~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l 400 (604)
T COG4178 322 FGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSL 400 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeE
Confidence 22233333344455667778888888888888889998888642 111111000 00000000145699999999
Q ss_pred EecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccc
Q 000774 917 RYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF 996 (1293)
Q Consensus 917 ~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf 996 (1293)
.-++.. ..+++.||+|++||.+-|.||||||||||+|+|+|+++--+|+|..-. -..+-|+||.|.+-
T Consensus 401 ~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p 468 (604)
T COG4178 401 RTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLP 468 (604)
T ss_pred ECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCC
Confidence 987654 689999999999999999999999999999999999999999986541 13578999999999
Q ss_pred cccHhhhcCC-CC--CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCC
Q 000774 997 SGTVRFNLDP-FS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEAT 1073 (1293)
Q Consensus 997 ~~ti~~nl~~-~~--~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpT 1073 (1293)
.||+||-|.+ .. ..+|+++.++|.+|++.++++++. +.+. -...||+||||||++||.|+++|++++|||+|
T Consensus 469 ~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~-~~~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEAT 543 (604)
T COG4178 469 QGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLD-EEDR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEAT 543 (604)
T ss_pred CccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHh-ccCc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecch
Confidence 9999998863 22 268999999999999999999963 2222 33469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEe
Q 000774 1074 AAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLD 1117 (1293)
Q Consensus 1074 s~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~ 1117 (1293)
|+||++++..+++.+++..++.|+|-|+||.....-.++.+-+.
T Consensus 544 sALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 544 SALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred hccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999999999999989999999999987766666655554
No 359
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=356.44 Aligned_cols=206 Identities=29% Similarity=0.461 Sum_probs=170.6
Q ss_pred cEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 284 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
.|+++|++|+|+... +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|....
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999996421 236999999999999999999999999999999999999999985321
Q ss_pred ---------------------ecCcEEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCCh-hHHhc
Q 000774 347 ---------------------IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQ-HDLDL 395 (1293)
Q Consensus 347 ---------------------~~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~-~~~~~ 395 (1293)
+++.||||+|+| .+|..||+|||.|+.. .+. +++.++++.+++. +..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~- 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ- 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-
Confidence 134599999986 5788899999998732 222 3445666666664 2222
Q ss_pred CCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-
Q 000774 396 LPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS- 474 (1293)
Q Consensus 396 l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~- 474 (1293)
....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.+......|+|+|+|||+++++.
T Consensus 161 ----------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 161 ----------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 344689999999999999999999999999999999999999998866554456899999999999875
Q ss_pred hCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 475 QVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 475 ~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
.||||++|++|++++.|+++++.+..
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~~ 256 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSDN 256 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcCH
Confidence 58999999999999999999987654
No 360
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-38 Score=338.50 Aligned_cols=189 Identities=26% Similarity=0.373 Sum_probs=161.2
Q ss_pred EEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCC---CCcceEEECCeecCCCChHHHh
Q 000774 909 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLR 983 (1293)
Q Consensus 909 i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~---p~~G~I~i~g~~i~~~~~~~~r 983 (1293)
+.++||+|.|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++...+ ...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~~ 82 (202)
T cd03233 4 LSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKYP 82 (202)
T ss_pred EEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhhc
Confidence 7899999999742 4579999999999999999999999999999999999999 89999999999987654 3567
Q ss_pred hhceEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 984 KILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+.++|+||++.+|.. |+++|+.+.... . ..+....||||||||++|||||+.
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~------------~---------------~~~~~~~LS~Ge~qrl~laral~~ 135 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRC------------K---------------GNEFVRGISGGERKRVSIAEALVS 135 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhh------------c---------------cccchhhCCHHHHHHHHHHHHHhh
Confidence 789999999988865 999998642100 0 223446799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEe-cCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIA-HRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vt-H~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
+|++|||||||++||+++++.+++.|++..+ ++|+|+++ |+.+.+.. ||++++|++|++++.|
T Consensus 136 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 136 RASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999998754 46766655 55567655 9999999999998764
No 361
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-37 Score=351.92 Aligned_cols=209 Identities=28% Similarity=0.408 Sum_probs=170.7
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++||+++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ...++.++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 38999999999633 369999999999999999999999999999999999999999999999998742 11234699
Q ss_pred EEcccccc---ccccHhhhcCCCC--------CCC---HHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 000774 988 IIPQSPVL---FSGTVRFNLDPFS--------EHS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1053 (1293)
Q Consensus 988 ~v~Q~~~l---f~~ti~~nl~~~~--------~~~---~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqr 1053 (1293)
|+||++.+ +..++++|+.... ... ++.+.++++.. |+.........+||||||||
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 150 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARV-----------DMVEFRHRQIGELSGGQKKR 150 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHc-----------CChhHhcCCcccCCHHHHHH
Confidence 99999865 3447888875310 000 11233333433 33334445567899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1054 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1054 l~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||+++++ +|++++.|+++++.
T Consensus 151 v~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 151 VFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 999999999999999999999999999999999999875 47899999999998866 9999777 89999999999986
Q ss_pred h
Q 000774 1132 S 1132 (1293)
Q Consensus 1132 ~ 1132 (1293)
+
T Consensus 230 ~ 230 (272)
T PRK15056 230 T 230 (272)
T ss_pred C
Confidence 3
No 362
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.2e-37 Score=331.71 Aligned_cols=177 Identities=33% Similarity=0.533 Sum_probs=157.4
Q ss_pred EEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEE
Q 000774 910 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 989 (1293)
Q Consensus 910 ~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 989 (1293)
+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++..+++.++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999975 3699999999999999999999999999999999999999999999999999888888888889999
Q ss_pred ccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000774 990 PQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVL 1069 (1293)
Q Consensus 990 ~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlL 1069 (1293)
|| +++..++.+++ ...+.+||||||||++||||++.+|++|||
T Consensus 79 ~q--------------------------~l~~~gl~~~~-----------~~~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLA-----------DRPFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHh-----------cCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 33444444332 334568999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1070 DEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1070 DEpTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999998754 6899999999999865 9999999999998654
No 363
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-37 Score=363.60 Aligned_cols=204 Identities=28% Similarity=0.415 Sum_probs=173.1
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVA 352 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~ 352 (1293)
..|+++|++++|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+.+|++|.... .++.||
T Consensus 3 ~~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig 79 (353)
T TIGR03265 3 PYLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYG 79 (353)
T ss_pred cEEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3589999999996 356999999999999999999999999999999999999999984322 134699
Q ss_pred EEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
||+|++.+| ..||+|||.|+.. .+ .+++.++++..++.+..+.. ..+|||||||||+||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~-----------~~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKY-----------PGQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 999999998 5799999998732 12 23456667777766554433 46899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
|+.+|+++|||||||+||+.+++++.+.+.+...+ |.|+|+|||+++++. .||+|++|++|++++.|+++++.++.
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999998877654443 899999999999875 58999999999999999999987653
No 364
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=355.27 Aligned_cols=207 Identities=28% Similarity=0.449 Sum_probs=170.0
Q ss_pred cEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCce--------------ee
Q 000774 284 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASA--------------VI 347 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~--------------~~ 347 (1293)
.|+++|++|+|+... ++++|+||||+|++||++||+|+||||||||+++|+|+++|++|... ..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 388999999996321 25799999999999999999999999999999999999999988431 12
Q ss_pred cCcEEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 348 RGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 348 ~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
+..||||||+| .+|+.||+|||.++.. .+. +++.++++.+++.. .+........||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHHH
Confidence 34699999998 5678999999998631 222 23455666666641 011234457899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHH
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 496 (1293)
++|||||+.+|++|||||||++||+.+.+++++.+..... .|+|+|+|||+++++. .||||++|++|++++.|+++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREV 232 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999986655444 3899999999999985 5999999999999999999988
Q ss_pred hhc
Q 000774 497 SNN 499 (1293)
Q Consensus 497 ~~~ 499 (1293)
.+.
T Consensus 233 ~~~ 235 (287)
T PRK13637 233 FKE 235 (287)
T ss_pred HhC
Confidence 654
No 365
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.1e-37 Score=335.85 Aligned_cols=182 Identities=29% Similarity=0.470 Sum_probs=160.5
Q ss_pred cEEEEEEEEEecCC----CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCC--CCCcceEEECCeecCCCChHH
Q 000774 908 SIKFEDVVLRYRPE----LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~----~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~--~p~~G~I~i~g~~i~~~~~~~ 981 (1293)
.++++||+++|+.. ..++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 38999999999752 246999999999999999999999999999999999999 9999999999998864 35
Q ss_pred HhhhceEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHh
Q 000774 982 LRKILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1060 (1293)
Q Consensus 982 ~r~~i~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAral 1060 (1293)
.++.++|+||++.+|.. |+++|+.+.. . + ..||||||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~--~-------------------~~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------K--L-------------------RGLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------H--h-------------------ccCCHHHHHHHHHHHHH
Confidence 67889999999988865 9999875210 0 0 06999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcc-hhhc-cCEEEEEeCCeEeeec
Q 000774 1061 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN-TIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1061 l~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~-~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++ .+.. ||++++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 4789999999997 5654 9999999999998754
No 366
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=353.39 Aligned_cols=206 Identities=25% Similarity=0.433 Sum_probs=169.6
Q ss_pred EEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------------
Q 000774 285 ISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------- 346 (1293)
Q Consensus 285 i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------- 346 (1293)
|+++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 136999999999999999999999999999999999999999984211
Q ss_pred ecCcEEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 347 IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 347 ~~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
.+..||||+|+| .+|..||.||+.|+.. .+. +++.++++..++.+.+ ......+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHHH
Confidence 234699999998 6888899999998732 122 2345556666664211 12345689999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHH
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 496 (1293)
|++|||||+.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|+|||+++++. .||||++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999998866544446899999999999885 5999999999999999999998
Q ss_pred hhcc
Q 000774 497 SNNG 500 (1293)
Q Consensus 497 ~~~~ 500 (1293)
..+.
T Consensus 232 ~~~~ 235 (288)
T PRK13643 232 FQEV 235 (288)
T ss_pred HcCH
Confidence 7643
No 367
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-37 Score=361.72 Aligned_cols=204 Identities=28% Similarity=0.423 Sum_probs=169.8
Q ss_pred EEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ec
Q 000774 285 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 348 (1293)
Q Consensus 285 i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~ 348 (1293)
|+++|++|+|+.+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 367999999999999999999999999999999999999999984321 13
Q ss_pred CcEEEEcCCcccc-CccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 349 GTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
..|||++|++.+| +.||+||+.++.. .+. +++.+.++..++.+..+ ....+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKAD-----------RYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 5699999999987 5799999987521 222 23445566666654433 334689999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhh
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
|||||+.+|++|||||||++||+.+.+.+++.+.+... .|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999987665443 38999999999999875 89999999999999999999876
Q ss_pred c
Q 000774 499 N 499 (1293)
Q Consensus 499 ~ 499 (1293)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 5
No 368
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.6e-38 Score=308.24 Aligned_cols=194 Identities=26% Similarity=0.388 Sum_probs=167.7
Q ss_pred CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEccccccccccHh
Q 000774 922 LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVR 1001 (1293)
Q Consensus 922 ~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 1001 (1293)
..++|+++||++.+||.++|.||||||||||+|.++-+..|++|++++.|.|++.+++..+|++|+||-|.|.||.+||.
T Consensus 15 ~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tVe 94 (223)
T COG4619 15 DAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTVE 94 (223)
T ss_pred CCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccchh
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCC-CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Q 000774 1002 FNLDPFSEH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRT 1080 (1293)
Q Consensus 1002 ~nl~~~~~~-~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t 1080 (1293)
+|+.+-... .+.. .+..+.+++.++. -.++.+.+...+||||||||++|+|-|.--|+||+||||||+||+.+
T Consensus 95 DNlifP~~~r~rr~-----dr~aa~~llar~~-l~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsALD~~n 168 (223)
T COG4619 95 DNLIFPWQIRNRRP-----DRAAALDLLARFA-LPDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSALDESN 168 (223)
T ss_pred hccccchHHhccCC-----ChHHHHHHHHHcC-CchhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhcChhh
Confidence 999642111 0000 1122334444432 23466777888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--CCcEEEEEecCcch-hhccCEEEEEeCCeE
Q 000774 1081 DALIQKTIREEF--KSCTMLIIAHRLNT-IIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1081 ~~~i~~~l~~~~--~~~tvi~vtH~~~~-~~~~d~i~vl~~G~i 1121 (1293)
++.|.+.|.++. ++..+++||||-+. +..+|+++-+..|++
T Consensus 169 kr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 169 KRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred HHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 999999999987 35899999999998 666999999999876
No 369
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.7e-37 Score=361.93 Aligned_cols=203 Identities=29% Similarity=0.422 Sum_probs=173.3
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVA 352 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~ 352 (1293)
+.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .++.||
T Consensus 13 ~~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4699999999996 357999999999999999999999999999999999999999884321 124599
Q ss_pred EEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
||+|++.+| ..||+|||.|+.. .+ .+++.++++..++.+..+..| .+|||||||||+||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 999999998 6699999998742 12 234566677777776666555 5899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|+.+|++|||||||++||+.+++++.+.+.+... .|.|+|+|||+++++. .+|+|++|++|++++.|+++++..+
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999887665443 3899999999999865 5899999999999999999998765
No 370
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-37 Score=344.04 Aligned_cols=202 Identities=31% Similarity=0.457 Sum_probs=166.7
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 353 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~ 353 (1293)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .++.++|
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~ 78 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGF 78 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEE
Confidence 4789999999963 57999999999999999999999999999999999999999884321 1246999
Q ss_pred EcCCcccc-CccHHHHHccCCCC-------CH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 354 VPQVSWIF-NATVRDNILFGSAF-------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~~~-------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
++|++.++ ..||+||+.++... +. +++.+.++..++.+..+ ....+||||||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLAD-----------RYPAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHH
Confidence 99999887 57999999876321 11 22344555555543333 3346899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||+.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 99999999999999999999999999998866554443 7899999999998764 899999999999999999887643
No 371
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.4e-37 Score=331.89 Aligned_cols=172 Identities=29% Similarity=0.473 Sum_probs=155.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh-HHHhhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL-MDLRKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~-~~~r~~i 986 (1293)
.++++|++++| +++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++ ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 38999999998 7999999999999999999999999999999999999999999999999988764 3467789
Q ss_pred eEEcccc---ccc-cccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 987 GIIPQSP---VLF-SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 987 ~~v~Q~~---~lf-~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+|+||++ .++ ..|+++|+.+... ||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 344 4699999864200 99999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeE
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1121 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 1121 (1293)
+|++|||||||++||+.+++.+.+.|+++. +++|+|++||+++++.. ||++++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999875 47899999999999877 999999999974
No 372
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.9e-37 Score=356.63 Aligned_cols=203 Identities=26% Similarity=0.414 Sum_probs=168.9
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTV 351 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i 351 (1293)
..|+++|++++|+ ++.+|+||||+|++||++||+||||||||||+++|+|+++|++|.... .+..|
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 4699999999996 357999999999999999999999999999999999999999984321 23569
Q ss_pred EEEcCCcccc-CccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHH
Q 000774 352 AYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 423 (1293)
Q Consensus 352 ~~v~Q~~~l~-~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAr 423 (1293)
|||||++.++ ..|++||+.+... .+. ++..++++.+++.+..+ ....+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKAD-----------AKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhc-----------CchhhCCHHHHHHHHHHH
Confidence 9999999887 5799999975211 121 23344555555543322 233589999999999999
Q ss_pred HhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 424 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 424 al~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||+.+|+++||||||++||+.+++++++.+.+...+|+|+|++||++++++. ||||++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999998765554568999999999999975 899999999999999999988644
No 373
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-37 Score=351.49 Aligned_cols=201 Identities=29% Similarity=0.452 Sum_probs=170.0
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.|+++|++|+|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .++.|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999962 357999999999999999999999999999999999999999984321 13469
Q ss_pred EEEcCCc--cccCccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVS--WIFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~--~l~~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
||++|+| .++..||.||+.|+.. .+ .+++.++++.+++.+..+..| .+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 5678899999998632 22 234566777777766555444 48999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHh
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
|||+.+|++|||||||++||+.+..++++.+.+...+|+|+|++||+++++. .||||++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999998876655455899999999999985 59999999999999999987643
No 374
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.5e-36 Score=385.57 Aligned_cols=97 Identities=25% Similarity=0.439 Sum_probs=88.3
Q ss_pred Ccch-hhhcCCCCCChhHHHHHHHHHHhcc---CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhh
Q 000774 1034 GLDA-QVSEAGENFSVGQRQLLSLSRALLR---RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTII 1108 (1293)
Q Consensus 1034 gl~~-~~~~~~~~LSgGqkqrl~lArall~---~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~ 1108 (1293)
|++. .+++...+|||||+||++|||+|++ +|+++||||||++||+.+.+.+++.|+++. .+.|||+|+|+++.+.
T Consensus 816 gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~ 895 (924)
T TIGR00630 816 GLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIK 895 (924)
T ss_pred CCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 5554 3577788999999999999999997 599999999999999999999999999875 4789999999999998
Q ss_pred ccCEEEEE------eCCeEeeecChhhh
Q 000774 1109 DCDRILLL------DSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1109 ~~d~i~vl------~~G~i~~~g~~~el 1130 (1293)
.||+|++| ++|+|++.|+++++
T Consensus 896 ~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 896 TADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 89999999 79999999999886
No 375
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-37 Score=352.04 Aligned_cols=207 Identities=29% Similarity=0.513 Sum_probs=170.0
Q ss_pred EEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------------
Q 000774 285 ISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------- 346 (1293)
Q Consensus 285 i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------- 346 (1293)
++++|++|+|+... .+++|+||||+|++||+++|+|+||||||||+++|+|+++|++|....
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 257999999999999999999999999999999999999999884311
Q ss_pred ecCcEEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 347 IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 347 ~~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
.+..||||+|+| .+|+.||+|||.|+.. .+. +++.++++.+++...+ ......+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 123599999997 5788899999988631 222 2345566666664322 12344689999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHH
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 495 (1293)
|++|||||+.+|++|||||||++||+.+..++.+.+..... .|.|+|+|||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999986655434 3899999999999986 589999999999999999998
Q ss_pred HhhccH
Q 000774 496 LSNNGE 501 (1293)
Q Consensus 496 l~~~~~ 501 (1293)
+.+...
T Consensus 233 ~~~~~~ 238 (290)
T PRK13634 233 IFADPD 238 (290)
T ss_pred HhcCHH
Confidence 876543
No 376
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-37 Score=342.17 Aligned_cols=191 Identities=25% Similarity=0.445 Sum_probs=159.0
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ecC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 349 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~~ 349 (1293)
++++|++++|++ ..+++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .++
T Consensus 2 l~~~~l~~~~~~-~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPG-GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecC-CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 789999999963 2257999999999999999999999999999999999999999884211 134
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
.++|++|++.++ ..||+||+.++.. .. .+++.++++..++.+..+..+ .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 699999999887 4799999987521 11 234566677777765444333 5899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeE
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 487 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i 487 (1293)
||||+.+|+++||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||++++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998665544458999999999999875 899999999974
No 377
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.2e-37 Score=345.02 Aligned_cols=200 Identities=23% Similarity=0.376 Sum_probs=164.1
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCcE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 351 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~i 351 (1293)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46899999996 357999999999999999999999999999999999999999984311 12359
Q ss_pred EEEcCCccccC-ccHHHHHccCCCC-------------CH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCCh
Q 000774 352 AYVPQVSWIFN-ATVRDNILFGSAF-------------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 413 (1293)
Q Consensus 352 ~~v~Q~~~l~~-~Tv~eni~~g~~~-------------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 413 (1293)
+|++|++.+|. .||+||+.++... .. +++.+.++..++.+ ..+....+|||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 146 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-----------LADRPAGELSY 146 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-----------hhhCChhhCCH
Confidence 99999999875 5999999875321 01 12233333333322 23455678999
Q ss_pred HHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecC
Q 000774 414 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGT 492 (1293)
Q Consensus 414 GqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~ 492 (1293)
|||||++|||||+.+|+++||||||++||+.+.+++++.+.+...+|+|+|+|||+++++.. ||+|++|++|++++.|+
T Consensus 147 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (236)
T cd03219 147 GQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGT 226 (236)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecC
Confidence 99999999999999999999999999999999999998766544468999999999999865 89999999999999999
Q ss_pred hHHHhh
Q 000774 493 FEDLSN 498 (1293)
Q Consensus 493 ~~~l~~ 498 (1293)
++++.+
T Consensus 227 ~~~~~~ 232 (236)
T cd03219 227 PDEVRN 232 (236)
T ss_pred HHHhcc
Confidence 888754
No 378
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=339.66 Aligned_cols=193 Identities=28% Similarity=0.425 Sum_probs=159.8
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAYV 354 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~v 354 (1293)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++|+
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 46899999996 357999999999999999999999999999999999999999984321 12469999
Q ss_pred cCCcccc-CccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhh
Q 000774 355 PQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 426 (1293)
Q Consensus 355 ~Q~~~l~-~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~ 426 (1293)
||++.++ ..|++||+.++.. .+. +++.++++..++.+..+. ...+||||||||++|||||+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNR-----------YPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhc-----------ChhhCCHHHHHHHHHHHHHh
Confidence 9999887 5799999987532 111 234555666666544433 33589999999999999999
Q ss_pred cCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEec
Q 000774 427 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 491 (1293)
Q Consensus 427 ~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g 491 (1293)
.+|+++||||||++||+.+.+++++.+.+... .|+|+|++||+++++.. ||+|++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999986655444 48999999999998765 8999999999998765
No 379
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.9e-37 Score=378.90 Aligned_cols=215 Identities=25% Similarity=0.405 Sum_probs=182.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHh-hhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLR-KIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r-~~i 986 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++...+ +.+
T Consensus 11 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSGV--EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 49999999999753 699999999999999999999999999999999999999999999999999877766654 469
Q ss_pred eEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1065 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~ 1065 (1293)
||+||++.+|.. |+++|+.+...... +.. ..+.+.++.+ |++........+||||||||++|||||+.+|+
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ 160 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQ-ASM-----QKMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRDSR 160 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccch-HHH-----HHHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 999999988875 99999975422111 111 1123334432 44444556677899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1066 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1066 iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+|||||||++||+.+.+.+.+.|+++. +++|||++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 161 lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 161 ILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999864 47899999999999876 99999999999999999998864
No 380
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.4e-37 Score=339.34 Aligned_cols=197 Identities=24% Similarity=0.382 Sum_probs=160.7
Q ss_pred EEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh----HHHhhhc
Q 000774 911 FEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL----MDLRKIL 986 (1293)
Q Consensus 911 ~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~----~~~r~~i 986 (1293)
++||++.|++. ++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..++. ...++.+
T Consensus 1 i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGDK--IILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECCE--EEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 46899999753 69999999999999999999999999999999999999999999999999765432 2356789
Q ss_pred eEEcccccccc-ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 987 GIIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 987 ~~v~Q~~~lf~-~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
+|++|++.+|. .|+++|+.+.. .....+.. ..+.+.++.+ |++...+....+||||||||++|||||+.
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qr~~laral~~ 151 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKR-----EKKKEALEKV--GLNLKLKQKIYELSGGEQQRVALARAILK 151 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CchhhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 99999999987 59999986421 11111111 1122333332 34444555667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhccCEEEEE
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIIDCDRILLL 1116 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~~d~i~vl 1116 (1293)
+|++|||||||++||+.+.+.+.+.|++..+ +.|+|++||+++.+..||+|++|
T Consensus 152 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 152 DPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999998754 78999999999987779999875
No 381
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4e-37 Score=346.37 Aligned_cols=217 Identities=19% Similarity=0.298 Sum_probs=175.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcC--CCCCcceEEECCeecCCCChHHHhh-
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI--VELERGRILIDGFDIAKFGLMDLRK- 984 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~--~~p~~G~I~i~g~~i~~~~~~~~r~- 984 (1293)
.++++|+++.|++. ++|+|+||+|++||++||+|+||||||||+++|+|+ ++|++|+|.++|.++...++...++
T Consensus 7 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNEN--EILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCCE--EeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 38999999999743 699999999999999999999999999999999998 6899999999999998877665554
Q ss_pred hceEEccccccccc-cHhhhcCCCCC----C---CHHHHHHHHHHhhHHHHHHHccCCcc-hhhhcCCC-CCChhHHHHH
Q 000774 985 ILGIIPQSPVLFSG-TVRFNLDPFSE----H---SDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGE-NFSVGQRQLL 1054 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~-ti~~nl~~~~~----~---~~~~~~~~l~~~~l~~~i~~lp~gl~-~~~~~~~~-~LSgGqkqrl 1054 (1293)
.++|+||++.+|.+ |+.+|+..... . .+.+..+.. ..+.+.++.+ |+. +..+.... .||||||||+
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv 160 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFL--EIINEKLKLV--GMDPSFLSRNVNEGFSGGEKKRN 160 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHH--HHHHHHHHHc--CCchhhhccccccCCCHHHHHHH
Confidence 48999999998876 88888753210 0 000000000 1122333332 343 23444444 5999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc--cCEEEEEeCCeEeeecChhhh
Q 000774 1055 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID--CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1055 ~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~--~d~i~vl~~G~i~~~g~~~el 1130 (1293)
+|||||+.+|+||||||||++||+.+.+.+.+.|+++. .++|||++||+++.+.. ||++++|++|++++.|+++++
T Consensus 161 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 161 EILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 99999999999999999999999999999999999875 47999999999999875 899999999999999998843
No 382
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.4e-37 Score=345.79 Aligned_cols=194 Identities=27% Similarity=0.393 Sum_probs=159.1
Q ss_pred CceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEc-ccccccc-ccHh
Q 000774 924 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIP-QSPVLFS-GTVR 1001 (1293)
Q Consensus 924 ~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~-Q~~~lf~-~ti~ 1001 (1293)
++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ....+++++|+| |++.+|. .|++
T Consensus 35 ~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv~ 113 (236)
T cd03267 35 EALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPVI 113 (236)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcHH
Confidence 699999999999999999999999999999999999999999999999987542 345677899998 5666764 5999
Q ss_pred hhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000774 1002 FNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDV 1078 (1293)
Q Consensus 1002 ~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~ 1078 (1293)
+|+.+.. ....++..+. +.+.++.+ |++.........||||||||++|||||+.+|++|||||||++||+
T Consensus 114 e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 114 DSFYLLAAIYDLPPARFKKR-----LDELSELL--DLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred HHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 9985321 1222222211 22333332 444445556678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeec
Q 000774 1079 RTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1125 (1293)
Q Consensus 1079 ~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 1125 (1293)
.+.+.+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|
T Consensus 187 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 187 VAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999998753 6899999999999876 9999999999998764
No 383
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.3e-38 Score=326.94 Aligned_cols=213 Identities=23% Similarity=0.478 Sum_probs=186.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
+++++|+++|++. .+++|+||.+++|++.|++|||||||||++++|+|+++|++|+|.++|.+++. ..+++|||
T Consensus 3 L~ie~vtK~Fg~k--~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~----~~~~rIGy 76 (300)
T COG4152 3 LEIEGVTKSFGDK--KAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ----EIKNRIGY 76 (300)
T ss_pred eEEecchhccCce--eeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh----hhhhhccc
Confidence 7999999999865 69999999999999999999999999999999999999999999999998754 46789999
Q ss_pred Eccccccccc-cHhhhcCCCCC---CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf~~-ti~~nl~~~~~---~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
+|.+.-|+.. ||.|.|.+++. ....++. ..+..|++++. +-....+....||-|++|++.+--+++++|
T Consensus 77 LPEERGLy~k~tv~dql~yla~LkGm~~~e~~-----~~~~~wLer~~--i~~~~~~kIk~LSKGnqQKIQfisaviHeP 149 (300)
T COG4152 77 LPEERGLYPKMTVEDQLKYLAELKGMPKAEIQ-----KKLQAWLERLE--IVGKKTKKIKELSKGNQQKIQFISAVIHEP 149 (300)
T ss_pred ChhhhccCccCcHHHHHHHHHHhcCCcHHHHH-----HHHHHHHHhcc--ccccccchHHHhhhhhhHHHHHHHHHhcCC
Confidence 9999999965 99999876643 2333333 23556777753 333344566789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcC
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1134 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 1134 (1293)
+++|||||+|||||.+.+.+.+.+.++. +|.|||+.||+|+-++. ||+++.|++|+.|-+|+.+++.+..
T Consensus 150 eLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 150 ELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred CEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhc
Confidence 9999999999999999999999999876 58999999999999988 9999999999999999999998643
No 384
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.2e-37 Score=341.56 Aligned_cols=198 Identities=27% Similarity=0.410 Sum_probs=164.1
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCCcee-------------
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL-----PPVSDASAV------------- 346 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~-----~~~~g~~~~------------- 346 (1293)
|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|++ +|++|....
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 47899999996 357999999999999999999999999999999999999 898884211
Q ss_pred -ecCcEEEEcCCccccCccHHHHHccCCC---C-C----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 347 -IRGTVAYVPQVSWIFNATVRDNILFGSA---F-E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 347 -~~~~i~~v~Q~~~l~~~Tv~eni~~g~~---~-~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
.++.++|++|++.+|..||+||+.++.. . . .++..++++..++.+..+..++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 1346999999998888899999987531 1 1 2344556666666554433211 4689999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHH
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 495 (1293)
|++|||||+.+|+++||||||++||+.+.+++++.+.+...+ +|+|++||+++++. .||++++|++|++++.|++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999999999999866554444 89999999999876 589999999999999988765
No 385
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-37 Score=351.05 Aligned_cols=208 Identities=24% Similarity=0.431 Sum_probs=169.0
Q ss_pred cEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 284 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
.++++|++|+|+.+. ++++|+||||+|++||+++|+|+||||||||+++|+|+++|++|....
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 488999999996322 247999999999999999999999999999999999999999984211
Q ss_pred -ecCcEEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 347 -IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 347 -~~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
.+..||||+|+| .+|..||.|||.++.. .+. +++.++++.+++... ..+....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 234699999997 5788899999998631 222 223344445554311 12345578999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 494 (1293)
||++|||||+.+|+++||||||++||+.+.+++.+.+..... .|+|+|+|||+++++. .||||++|++|++++.|+++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999886655433 4899999999999885 58999999999999999999
Q ss_pred HHhhccH
Q 000774 495 DLSNNGE 501 (1293)
Q Consensus 495 ~l~~~~~ 501 (1293)
++.+...
T Consensus 232 ~~~~~~~ 238 (286)
T PRK13646 232 ELFKDKK 238 (286)
T ss_pred HHHhCHH
Confidence 8876543
No 386
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=359.27 Aligned_cols=202 Identities=31% Similarity=0.447 Sum_probs=170.5
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 353 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~ 353 (1293)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .++.|+|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 488999999996 357999999999999999999999999999999999999999984321 1246999
Q ss_pred EcCCcccc-CccHHHHHccCCC-------CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 354 VPQVSWIF-NATVRDNILFGSA-------FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~~-------~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
|+|++.+| ..||+|||.|+.. .+ .++..+.++..++.+..+.. ..+||||||||++|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----------PAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHHH
Confidence 99999998 5799999998732 12 13455566666665544433 35899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||+.+|++|||||||++||+.+++.+.+.+.+...+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++..+
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999998866554444 7899999999998764 899999999999999999998765
No 387
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.2e-37 Score=335.96 Aligned_cols=190 Identities=30% Similarity=0.478 Sum_probs=159.8
Q ss_pred EEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------ecCcEEEEcC
Q 000774 286 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------IRGTVAYVPQ 356 (1293)
Q Consensus 286 ~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------~~~~i~~v~Q 356 (1293)
+++|++++|++ .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .++.|+|++|
T Consensus 1 ~~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q 78 (205)
T cd03226 1 RIENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQ 78 (205)
T ss_pred CcccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEec
Confidence 36899999963 167999999999999999999999999999999999999999984321 1346999999
Q ss_pred Cc--cccCccHHHHHccCCC---CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 357 VS--WIFNATVRDNILFGSA---FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 357 ~~--~l~~~Tv~eni~~g~~---~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
++ .++..|++||+.++.. ...++..++++..++.+..+..+ .+||||||||++|||||+.+|++
T Consensus 79 ~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 79 DVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCCCE
Confidence 97 3568899999987632 12345677788888766544433 48999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEE
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVK 488 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~ 488 (1293)
+||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||++++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999988665544568999999999999875 8999999999874
No 388
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=333.40 Aligned_cols=181 Identities=25% Similarity=0.389 Sum_probs=158.9
Q ss_pred cEEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCC--CCCcceEEECCeecCCCChHHHh
Q 000774 908 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDLR 983 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~--~p~~G~I~i~g~~i~~~~~~~~r 983 (1293)
.|+++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.++. ..++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 48999999999641 136999999999999999999999999999999999986 489999999999875 4567
Q ss_pred hhceEEccccccccc-cHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 984 KILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 984 ~~i~~v~Q~~~lf~~-ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
++++|+||++.+|.. |+++|+.+. .. ++ +||||||||++||||++.
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~-----~~-------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------AL-----LR-------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HH-----Hh-------------------cCCHHHhHHHHHHHHHhc
Confidence 889999999988875 999998631 00 00 699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcch-h-hccCEEEEEeC-CeEeeec
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-I-IDCDRILLLDS-GRVLEYD 1125 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~-~-~~~d~i~vl~~-G~i~~~g 1125 (1293)
+|++|||||||++||+++.+.+++.|+++. .++|+|++||+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999865 37899999999984 4 45999999998 9998865
No 389
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3e-37 Score=360.37 Aligned_cols=203 Identities=27% Similarity=0.413 Sum_probs=173.0
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCC--CCcee----------ecCc
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS--DASAV----------IRGT 350 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~--g~~~~----------~~~~ 350 (1293)
..|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |.... .++.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 4589999999996 3579999999999999999999999999999999999999999 84321 1346
Q ss_pred EEEEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
||||+|++.+| ..||+|||.|+.. .+ .+++.++++..++.+..+..| .+|||||||||+||
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvaLA 149 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIAIA 149 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHHHH
Confidence 99999999998 5699999998632 12 134566677777766655544 58999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC--CcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS--GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~--~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|||+.+|++|||||||++||+..++++.+.+.+...+ |.|+|+|||+++++. .||+|++|++|+++..|+++++.++
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999877654444 789999999999875 5899999999999999999998765
No 390
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3.6e-37 Score=323.22 Aligned_cols=163 Identities=33% Similarity=0.432 Sum_probs=148.7
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 4689999999643 36999999999999999999999999999999999999999999999873 57999
Q ss_pred EccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000774 989 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1068 (1293)
Q Consensus 989 v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLl 1068 (1293)
+||++.+++.|+++|+.+. ....||||||||++||||++++|++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999998888999998641 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCcchhhccCEEEEEeCC
Q 000774 1069 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSG 1119 (1293)
Q Consensus 1069 LDEpTs~lD~~t~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G 1119 (1293)
|||||++||+++.+.+.+.|++. ++|+|++||+++....||++++|++|
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 99999999999999999999985 68999999999877679999999865
No 391
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-37 Score=361.99 Aligned_cols=202 Identities=29% Similarity=0.396 Sum_probs=170.3
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 353 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~ 353 (1293)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..|||
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 489999999996 357999999999999999999999999999999999999999984321 1245999
Q ss_pred EcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
|+|++.+| ..||+|||.|+.. .+ .+++.++++..++.+..+.. ..+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~-----------~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRK-----------PKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCC-----------hhhCCHHHHHHHHHHHHH
Confidence 99999988 5699999998632 12 13455667777776544433 358999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
+.+|++|||||||++||+.+++.+.+.+.+... .|.|+|+|||+++++. .||+|++|++|++++.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999886655444 3899999999999876 5899999999999999999988654
No 392
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-37 Score=347.44 Aligned_cols=207 Identities=31% Similarity=0.464 Sum_probs=174.2
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.++++|++++|+. ..+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..|
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 5899999999963 2457999999999999999999999999999999999999999984321 13469
Q ss_pred EEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
+|++|++ .+++.||.|||.++.. .+. +++.++++..++.+.++..+ ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 3567899999987521 122 34566777777776655544 48999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccH
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGE 501 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 501 (1293)
|||+.+|++|||||||++||+.+.+++++.+.+...+ |+|+|++||+++.+..||+|++|++|++++.|+.+++.....
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSGH 232 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCHH
Confidence 9999999999999999999999999999866554444 899999999999998899999999999999999998876544
Q ss_pred H
Q 000774 502 L 502 (1293)
Q Consensus 502 ~ 502 (1293)
.
T Consensus 233 ~ 233 (279)
T PRK13635 233 M 233 (279)
T ss_pred H
Confidence 3
No 393
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.9e-37 Score=320.57 Aligned_cols=159 Identities=30% Similarity=0.538 Sum_probs=147.7
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH-HHhhhce
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKILG 987 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~-~~r~~i~ 987 (1293)
|+++|++++|++. ++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ..+++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 4789999999753 699999999999999999999999999999999999999999999999999877654 4567899
Q ss_pred EEccccccccccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000774 988 IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1067 (1293)
Q Consensus 988 ~v~Q~~~lf~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iL 1067 (1293)
|+|| ||||||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 9999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEee
Q 000774 1068 VLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1123 (1293)
Q Consensus 1068 lLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 1123 (1293)
||||||++||+++.+.+.+.|+++. ++.|+|++||+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999875 47899999999998876 99999999999875
No 394
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=340.09 Aligned_cols=203 Identities=25% Similarity=0.398 Sum_probs=169.7
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.++++|++|+|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..+
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 489999999996 357999999999999999999999999999999999999999984321 13469
Q ss_pred EEEcCCccccCccHHHHHccCCCC---CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcC
Q 000774 352 AYVPQVSWIFNATVRDNILFGSAF---EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 428 (1293)
Q Consensus 352 ~~v~Q~~~l~~~Tv~eni~~g~~~---~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~ 428 (1293)
+|++|++.+|..|++||+.++... ..++..+.++..++.... ......+||||||||++|||||+.+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999988999999876321 123455566666664211 1234568999999999999999999
Q ss_pred CCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 429 SDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 429 ~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|+++||||||++||+.+.+++.+.+..... .|+|+|++||+++++.. ||+|++|++|++++.|+++++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 999999999999999999999886655444 38999999999999875 899999999999999999988754
No 395
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5.9e-37 Score=343.27 Aligned_cols=209 Identities=23% Similarity=0.379 Sum_probs=174.4
Q ss_pred EEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEE
Q 000774 910 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 989 (1293)
Q Consensus 910 ~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 989 (1293)
+++||++. .+|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.++|.++...++..+++.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 46677774 27999999999999999999999999999999999985 599999999999888888888889999
Q ss_pred ccccccc-cccHhhhcCCCCCC--CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc----
Q 000774 990 PQSPVLF-SGTVRFNLDPFSEH--SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR---- 1062 (1293)
Q Consensus 990 ~Q~~~lf-~~ti~~nl~~~~~~--~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~---- 1062 (1293)
||++.++ ..|+++|+.+.... ...+. ...+.+.++.+ |++.........||||||||++|||||+.
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~ 147 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEAL--GLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPD 147 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhccccc
Confidence 9998654 56999999754221 11111 11233444443 45555566778899999999999999997
Q ss_pred ---CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1063 ---RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1063 ---~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 148 ~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 148 INPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred cCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999999875 47899999999998766 99999999999999999988864
No 396
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-37 Score=339.12 Aligned_cols=198 Identities=24% Similarity=0.383 Sum_probs=164.9
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVAY 353 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~~ 353 (1293)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..++|
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 47899999996 357999999999999999999999999999999999999999984321 1246999
Q ss_pred EcCCccccC-ccHHHHHccCC---CCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWIFN-ATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l~~-~Tv~eni~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
++|++.++. .|++||+.++. ..+ .++..+.++..++.+..+.. ..+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-----------VKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 999998874 69999997642 111 23455667777766544432 358999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
+.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999998876655444 7899999999999875 899999999999999887764
No 397
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=4.6e-37 Score=345.08 Aligned_cols=218 Identities=17% Similarity=0.293 Sum_probs=169.0
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCC--CCCcceEEECCeecCCCChHHHh-hh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDLR-KI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~--~p~~G~I~i~g~~i~~~~~~~~r-~~ 985 (1293)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|.++...++...+ +.
T Consensus 2 i~~~nl~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVEDK--AILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 7899999999753 6999999999999999999999999999999999994 69999999999999877766654 56
Q ss_pred ceEEccccccccc-cHhhhcCCC-CC---CCHHHHHHHHH-HhhHHHHHHHccCCcc-hhhhcCC-CCCChhHHHHHHHH
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPF-SE---HSDADLWEALE-RAHLKDAIRRNSLGLD-AQVSEAG-ENFSVGQRQLLSLS 1057 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~-~~---~~~~~~~~~l~-~~~l~~~i~~lp~gl~-~~~~~~~-~~LSgGqkqrl~lA 1057 (1293)
++|+||++.++.. |..+++... .. ....+..+..+ ...+.+.++.+ ++. ....... ..||||||||++||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~qrv~la 157 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALL--KMPEDLLTRSVNVGFSGGEKKRNDIL 157 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHc--CCChhhcccCCCCCCCHHHHHHHHHH
Confidence 9999999987754 544443211 00 00000000000 01122333332 221 1122333 36999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc--cCEEEEEeCCeEeeecChhhh
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID--CDRILLLDSGRVLEYDTPEEL 1130 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~--~d~i~vl~~G~i~~~g~~~el 1130 (1293)
||++++|+||||||||++||+++.+.+.+.|+++.+ ++|||++||+++.+.. ||+|++|++|++++.|+++..
T Consensus 158 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 158 QMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 999999999999999999999999999999988754 6899999999999876 899999999999999998755
No 398
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6e-37 Score=360.78 Aligned_cols=203 Identities=30% Similarity=0.463 Sum_probs=173.0
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .++.|
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 589999999996 367999999999999999999999999999999999999999984321 23469
Q ss_pred EEEcCCccc-cCccHHHHHccCCC-----C------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 352 AYVPQVSWI-FNATVRDNILFGSA-----F------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 352 ~~v~Q~~~l-~~~Tv~eni~~g~~-----~------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
|||+|++.+ ++.|++||+.++.. . +.+++.++++..++.+..+. ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 68999999988641 1 12345667777777655433 3468999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhh
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
+|||||+++|++|||||||++||+.+...+.+.+.+...+|+|+|++||+++.+. .|||+++|++|++++.|+++++++
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 9999999999999999999999999999998866555446899999999999985 589999999999999999999876
Q ss_pred cc
Q 000774 499 NG 500 (1293)
Q Consensus 499 ~~ 500 (1293)
..
T Consensus 229 ~~ 230 (402)
T PRK09536 229 AD 230 (402)
T ss_pred cH
Confidence 53
No 399
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.5e-37 Score=335.52 Aligned_cols=199 Identities=48% Similarity=0.801 Sum_probs=173.7
Q ss_pred EEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------------ecC
Q 000774 286 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------IRG 349 (1293)
Q Consensus 286 ~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------------~~~ 349 (1293)
.+.|++|+|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 56889999974 367999999999999999999999999999999999999999884211 124
Q ss_pred cEEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCC
Q 000774 350 TVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 429 (1293)
Q Consensus 350 ~i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~ 429 (1293)
.++|++|++.+++.|++||+.++...+.++..++++.+++.+.++.+|.++++.++....+||||||||++|||||+.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 69999999999999999999987555555667788888888888888999999888899999999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHH-HHhh-hcCCcEEEEEecCcchhhhCCeEEEEeCCe
Q 000774 430 DVFIFDDPLSALDAHVGRQVFDR-CIRG-ELSGKTRVLVTNQLHFLSQVDRIILVHEGM 486 (1293)
Q Consensus 430 ~illLDEpts~LD~~~~~~i~~~-l~~~-~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~ 486 (1293)
+++||||||++||+.+.+.+.+. +++. ...|+|+|++||+++.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988872 4443 334799999999999998899999999874
No 400
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-37 Score=340.52 Aligned_cols=199 Identities=23% Similarity=0.376 Sum_probs=163.4
Q ss_pred CcEEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 283 PAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
+.++++|++|+|+.+. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|....
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 3589999999996322 257999999999999999999999999999999999999999884321
Q ss_pred e-cCcEEEEcCCccccC-ccHHHHHccCC---CCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 347 I-RGTVAYVPQVSWIFN-ATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 347 ~-~~~i~~v~Q~~~l~~-~Tv~eni~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
. +..|+|++|++.+|. .|++||+.++. ..+ .+++.++++..++.+.. .....+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG~~q 152 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRA-----------NHRPSELSGGERQ 152 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHH
Confidence 0 146999999998875 59999998631 112 13345566666654433 2344689999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEEEecC
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 492 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 492 (1293)
|++|||||+.+|++|||||||++||+.+.+++.+.+.+... +|+|+|+|||+++++..+|++++|++|++++.|+
T Consensus 153 rl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 153 RVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999886655433 5899999999999999889999999999998765
No 401
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-37 Score=379.25 Aligned_cols=215 Identities=22% Similarity=0.367 Sum_probs=181.5
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC--CcceEEECCeecCCCChHH-Hhh
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMD-LRK 984 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p--~~G~I~i~g~~i~~~~~~~-~r~ 984 (1293)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGGV--KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCCe--EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 38999999999743 699999999999999999999999999999999999996 8999999999998766554 456
Q ss_pred hceEEccccccccc-cHhhhcCCCCC------CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 000774 985 ILGIIPQSPVLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1057 (1293)
Q Consensus 985 ~i~~v~Q~~~lf~~-ti~~nl~~~~~------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lA 1057 (1293)
.+||+||++.+|.. |+++|+.+... ...++.. ..+.++++.+ |++...+....+||||||||++||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la 155 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMY-----LRAQKLLAQL--KLDINPATPVGNLGLGQQQLVEIA 155 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHHHH
Confidence 79999999988865 99999975321 1111111 1233445543 454445666778999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1058 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1058 rall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
|||+.+|+||||||||++||+.+...+.+.|+++. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 156 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 156 KALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 99999999999999999999999999999998864 47899999999999876 9999999999999999988874
No 402
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=341.73 Aligned_cols=198 Identities=28% Similarity=0.376 Sum_probs=166.5
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------ecCcEEEEc
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------IRGTVAYVP 355 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------~~~~i~~v~ 355 (1293)
+.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++|++
T Consensus 11 ~~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 4699999999996 357999999999999999999999999999999999999999985321 234699999
Q ss_pred CCccccC-ccHHHHHccCCCC-CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEE
Q 000774 356 QVSWIFN-ATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFI 433 (1293)
Q Consensus 356 Q~~~l~~-~Tv~eni~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~ill 433 (1293)
|++.++. .||+||+.++... ..++..+.++..++.+..+ ....+||||||||++|||||+.+|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRAN-----------EWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhc-----------CChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9998875 7999999876321 2345566677777654433 3446899999999999999999999999
Q ss_pred EeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChH
Q 000774 434 FDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 434 LDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||||++||+.+.+.+.+.+.+... .++|+|+|||+++++. .||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999886655433 4799999999999986 58999999999999988754
No 403
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.8e-37 Score=343.18 Aligned_cols=200 Identities=29% Similarity=0.433 Sum_probs=164.9
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ecC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 349 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~~ 349 (1293)
|+++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 367999999999999999999999999999999999999999884321 134
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCCC------------C---HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCCh
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSAF------------E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 413 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~~------------~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 413 (1293)
.++|++|++.+| ..||+||+.++... . .+++.++++..++.+.. .....+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-----------YQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCH
Confidence 599999999887 57999999875310 1 12344455555554333 334568999
Q ss_pred HHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEec
Q 000774 414 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 491 (1293)
Q Consensus 414 GqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g 491 (1293)
|||||++|||||+.+|+++||||||++||+.+.+++.+.+.+... .|+|+|+|||+++++. .||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999886655433 3799999999999985 58999999999999999
Q ss_pred ChHHHh
Q 000774 492 TFEDLS 497 (1293)
Q Consensus 492 ~~~~l~ 497 (1293)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 988863
No 404
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=7.4e-37 Score=331.65 Aligned_cols=194 Identities=24% Similarity=0.334 Sum_probs=164.5
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ..+|++++|
T Consensus 1 l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDGR--ALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCCc--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 4689999999753 6999999999999999999999999999999999999999999999999986543 467889999
Q ss_pred Ecccccccc-ccHhhhcCCCCC-CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000774 989 IPQSPVLFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1066 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~~-~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~i 1066 (1293)
+||++.++. .|+++|+.++.. ..++++.++++..++.++ ......+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGF-----------EDRPVAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhh-----------hcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998874 699999975432 234455556666555432 2334567999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEE
Q 000774 1067 LVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 1116 (1293)
Q Consensus 1067 LlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl 1116 (1293)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+...+.. ||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998864 47999999999887655 9999877
No 405
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.8e-37 Score=377.40 Aligned_cols=215 Identities=24% Similarity=0.363 Sum_probs=180.2
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i 986 (1293)
.|+++|++++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.+
T Consensus 4 ~i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPGV--KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCCe--EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 38999999999753 69999999999999999999999999999999999999999999999999876555443 5679
Q ss_pred eEEccccccccc-cHhhhcCCCCC-------CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1058 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~-------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAr 1058 (1293)
+|+||++.+|.. |+++|+.+... ....+.. ..+.+.++.+ |+.........+||||||||++|||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 154 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMY-----AEADKLLARL--NLRFSSDKLVGELSIGEQQMVEIAK 154 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHH
Confidence 999999988865 99999975321 1111111 1233444443 4444455666789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1059 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1059 all~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
||+.+|++|||||||++||+.+.+.+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 9999999999999999999999999999998864 46899999999999876 9999999999999999988764
No 406
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.5e-37 Score=358.50 Aligned_cols=190 Identities=24% Similarity=0.373 Sum_probs=162.0
Q ss_pred CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------e----cCcEEEEcCCccccC
Q 000774 299 ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------I----RGTVAYVPQVSWIFN 362 (1293)
Q Consensus 299 ~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~----~~~i~~v~Q~~~l~~ 362 (1293)
++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... + +..|+||+|++++|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 467999999999999999999999999999999999999999984321 1 457999999999985
Q ss_pred -ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEE
Q 000774 363 -ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIF 434 (1293)
Q Consensus 363 -~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~illL 434 (1293)
.||+|||.++.. .+ .++..++++.+++....+.. ..+|||||||||+|||||+.+|+++||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~-----------p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRY-----------PDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCC-----------hhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 699999998632 12 23455667777776554444 458999999999999999999999999
Q ss_pred eCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 435 DDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 435 DEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||++|||.+++++.+.+.+... .++|+|+|||+++++. .||+|++|++|++++.|+++++..+
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999999987766543 4899999999999865 5899999999999999999998875
No 407
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.7e-37 Score=338.92 Aligned_cols=192 Identities=28% Similarity=0.426 Sum_probs=157.4
Q ss_pred EEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------------e
Q 000774 285 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------I 347 (1293)
Q Consensus 285 i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------------~ 347 (1293)
|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996311 157999999999999999999999999999999999999999884321 1
Q ss_pred cCcEEEEcCCccccC-ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 348 RGTVAYVPQVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 348 ~~~i~~v~Q~~~l~~-~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
+..++|++|++.+|. .||+||+.++.. .+ .+++.++++..++.+..+ ....+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLN-----------HYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhh-----------cChhhcCHHHHHHH
Confidence 246999999998885 599999987532 11 134455566666544333 34468999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeE
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMV 487 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i 487 (1293)
+|||||+.+|++|||||||++||+.+.+++.+.+.+... .|+|+|+|||+++++..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999886655444 48999999999999888899999999974
No 408
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-37 Score=340.55 Aligned_cols=203 Identities=28% Similarity=0.440 Sum_probs=166.8
Q ss_pred EEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ec
Q 000774 285 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 348 (1293)
Q Consensus 285 i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~ 348 (1293)
|+++|++++|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996321 127999999999999999999999999999999999999999884311 13
Q ss_pred CcEEEEcCCccccC-ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 349 GTVAYVPQVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~~-~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
..|+|+||++.+|. .|++||+.++.. .+ .++..+.++..++.+..+. ...+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADA-----------YPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 46999999999885 799999986421 22 1234455566665544333 34689999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhh
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
|||||+.+|+++||||||++||+.+.+.+++.+.....+ |+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999998876654443 8999999999999865 89999999999999999887754
No 409
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3e-37 Score=341.84 Aligned_cols=194 Identities=26% Similarity=0.403 Sum_probs=161.6
Q ss_pred eeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceEEcccccccc-ccHhhhc
Q 000774 926 LHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFS-GTVRFNL 1004 (1293)
Q Consensus 926 l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~nl 1004 (1293)
|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+||++.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876443 2489999999887 5999998
Q ss_pred CCC-----CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 000774 1005 DPF-----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVR 1079 (1293)
Q Consensus 1005 ~~~-----~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDEpTs~lD~~ 1079 (1293)
.+. ....+.+.. ..+.+.++.+ |++.........||||||||++|||||+.+|++|||||||++||+.
T Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~ 148 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERR-----AIVEEHIALV--GLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDAL 148 (230)
T ss_pred HHHHHhcccCCCHHHHH-----HHHHHHHHHc--CCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHH
Confidence 642 112222111 1123344442 4555555667789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1080 TDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1080 t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 149 ~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 149 TRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 9999999999864 36899999999999876 9999999999999999877664
No 410
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.1e-37 Score=339.69 Aligned_cols=201 Identities=25% Similarity=0.360 Sum_probs=163.2
Q ss_pred ceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC----CcceEEECCeecCCCChHHHhhhceEEccccc-cc-c-
Q 000774 925 VLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL----ERGRILIDGFDIAKFGLMDLRKILGIIPQSPV-LF-S- 997 (1293)
Q Consensus 925 ~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p----~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~-lf-~- 997 (1293)
+++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... ...++.++|+||++. .| .
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57999999999999999999999999999999999999 899999999998653 223467999999995 34 3
Q ss_pred ccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcc---hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000774 998 GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD---AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 1071 (1293)
Q Consensus 998 ~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~---~~~~~~~~~LSgGqkqrl~lArall~~p~iLlLDE 1071 (1293)
.|+.+|+.... .....+. ...+.+.++.+ +++ +.....+..||||||||++||||++++|+||||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDE 151 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQA-----RALILEALEAV--GLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADE 151 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHH-----HHHHHHHHHHc--CCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 48888864211 0111110 01123333332 333 44566778899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHcC--CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhhcC
Q 000774 1072 ATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1134 (1293)
Q Consensus 1072 pTs~lD~~t~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 1134 (1293)
||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 152 Pt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 217 (230)
T TIGR02770 152 PTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNP 217 (230)
T ss_pred CccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 9999999999999999998753 6899999999999976 9999999999999999999997543
No 411
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-37 Score=379.00 Aligned_cols=216 Identities=22% Similarity=0.344 Sum_probs=181.9
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHH-hhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~-r~~i 986 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++... ++.+
T Consensus 5 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGPV--HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 38999999999753 69999999999999999999999999999999999999999999999999987776543 4579
Q ss_pred eEEccccccccc-cHhhhcCCCCC----C------CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSE----H------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1055 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~----~------~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~ 1055 (1293)
+|+||++.+|.. |+++|+.+... . ...+.. ..+.+.++.+ |+....+....+||||||||++
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv~ 155 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQMLE 155 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHH
Confidence 999999988865 99999864211 0 111111 1233444443 4544456667789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1056 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1056 lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|||||+.+|+||||||||++||+.+.+.+.+.|+++. .++|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 156 IAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 9999999999999999999999999999999999865 47899999999999976 99999999999999999988753
No 412
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-37 Score=337.72 Aligned_cols=198 Identities=29% Similarity=0.415 Sum_probs=162.5
Q ss_pred EEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------ecCcEEEEcC
Q 000774 285 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------IRGTVAYVPQ 356 (1293)
Q Consensus 285 i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------~~~~i~~v~Q 356 (1293)
|+++|++++|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46899999996311 157999999999999999999999999999999999999999984321 2346999999
Q ss_pred CccccC-ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcC
Q 000774 357 VSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 428 (1293)
Q Consensus 357 ~~~l~~-~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~ 428 (1293)
++.+|. .|++||+.++.. .. .+++.+.++..++.+..+.. ..+||||||||++|||||+.+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAY-----------PHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHHHHHHcC
Confidence 998875 799999986521 11 23455566666665544433 358999999999999999999
Q ss_pred CCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEe--CCeEEEecCh
Q 000774 429 SDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVH--EGMVKEEGTF 493 (1293)
Q Consensus 429 ~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~--~G~i~~~g~~ 493 (1293)
|+++||||||++||+.+.+.+++.+.+... .++|+|+|||+++++. .||++++|+ +|+++++++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999986655433 4899999999999876 589999999 7999987753
No 413
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-37 Score=341.72 Aligned_cols=200 Identities=28% Similarity=0.451 Sum_probs=164.4
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ecC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 349 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~~ 349 (1293)
++++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468999999963 257999999999999999999999999999999999999999884311 134
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCC------------CC---HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCCh
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSA------------FE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 413 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~------------~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 413 (1293)
.++|+||++.+| ..||+||+.++.. .. .+++.+.++..++.+. ....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDK-----------AYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhh-----------hCCCcccCCH
Confidence 599999999887 4799999986421 01 1233344555554332 2345579999
Q ss_pred HHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEec
Q 000774 414 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 491 (1293)
Q Consensus 414 GqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g 491 (1293)
|||||++|||||+.+|++|||||||++||+.+.+.+++.+..... .|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999999999886655443 4899999999999988 58999999999999999
Q ss_pred ChHHHh
Q 000774 492 TFEDLS 497 (1293)
Q Consensus 492 ~~~~l~ 497 (1293)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 988863
No 414
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-37 Score=346.40 Aligned_cols=202 Identities=32% Similarity=0.451 Sum_probs=169.0
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCcE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 351 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~i 351 (1293)
++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..|
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999952 356999999999999999999999999999999999999999884311 13459
Q ss_pred EEEcCCcc--ccCccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVSW--IFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~~--l~~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
+|++|+|. +++.|+.|||.++.. .+ .+++.++++..++.+..+. ....||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHR-----------SPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------CcccCCHHHHHHHHHH
Confidence 99999985 467899999987632 12 1334455666666544333 3468999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhc
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|||+.+|+++||||||++||+.+.+.+++.+.+...+|.|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998765544468999999999999988999999999999999999887654
No 415
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.2e-36 Score=336.58 Aligned_cols=205 Identities=26% Similarity=0.440 Sum_probs=173.8
Q ss_pred CCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecC
Q 000774 282 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRG 349 (1293)
Q Consensus 282 ~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~ 349 (1293)
.+.++++|++++|+...++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 35699999999997432357999999999999999999999999999999999999999984321 134
Q ss_pred cEEEEcCCccccCccHHHHHccCCC-CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcC
Q 000774 350 TVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 428 (1293)
Q Consensus 350 ~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~ 428 (1293)
.++|++|++.+|..||+||+.++.. ....++.+..+...+.+.++.++.|..+.++....+||||||||++|||||+.+
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 6999999999998999999987643 222333344455667788888887777778888999999999999999999999
Q ss_pred CCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeE
Q 000774 429 SDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMV 487 (1293)
Q Consensus 429 ~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i 487 (1293)
|+++||||||++||+.+.+++.+.+... .+++|+|++||+++++..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYDW-PERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHH-cCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999998866543 346899999999999988999999999974
No 416
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.2e-37 Score=352.41 Aligned_cols=202 Identities=25% Similarity=0.398 Sum_probs=167.3
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTV 351 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i 351 (1293)
..|+++|++++|+ ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|.... .+..|
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 3589999999996 357999999999999999999999999999999999999999984321 13569
Q ss_pred EEEcCCcccc-CccHHHHHccC-C--CCCHH----HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHH
Q 000774 352 AYVPQVSWIF-NATVRDNILFG-S--AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 423 (1293)
Q Consensus 352 ~~v~Q~~~l~-~~Tv~eni~~g-~--~~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAr 423 (1293)
||+||++.++ ..|++||+.+. . ..+.. +..+.++..++.+.. .....+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-----------DVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCchhhCCHHHHHHHHHHH
Confidence 9999999887 57999999742 1 12222 233445555544322 2334689999999999999
Q ss_pred HhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhh
Q 000774 424 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 424 al~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
||+.+|+++||||||++||+.+.+++++.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++..
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999998766554568999999999999864 89999999999999999988754
No 417
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.7e-37 Score=333.02 Aligned_cols=193 Identities=23% Similarity=0.378 Sum_probs=163.1
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAYV 354 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~v 354 (1293)
|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|.... .+..++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 47899999995 357999999999999999999999999999999999999999984321 13469999
Q ss_pred cCCcccc-CccHHHHHccCC---CCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCC
Q 000774 355 PQVSWIF-NATVRDNILFGS---AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 430 (1293)
Q Consensus 355 ~Q~~~l~-~~Tv~eni~~g~---~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~ 430 (1293)
+|++.++ +.|++||+.++. ..+.++..++++..++.+..+. ...+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999887 689999997652 1234566677777777654433 346899999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEec
Q 000774 431 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 491 (1293)
Q Consensus 431 illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g 491 (1293)
++||||||++||+.+.+++.+.+.+...+++|+|++||+++++.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999988665544468999999999999865 8999999999998764
No 418
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=347.18 Aligned_cols=205 Identities=25% Similarity=0.426 Sum_probs=171.3
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee--------------ecC
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IRG 349 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------~~~ 349 (1293)
.|+++|++|+|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... +++
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 6999999999962 357999999999999999999999999999999999999999884211 234
Q ss_pred cEEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 350 TVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 350 ~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
.|||++|++ .+++.|++||+.++.. ... +++.++++..++.+.. .....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 699999998 4678999999987521 121 3345566777765433 2345799999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhh
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
|||||+.+|++|||||||++||+.+.+.+.+.+.....+ |+|+|++||+++.+. .|||+++|++|++++.|+++++.+
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999998866554443 899999999999987 599999999999999999999876
Q ss_pred ccH
Q 000774 499 NGE 501 (1293)
Q Consensus 499 ~~~ 501 (1293)
...
T Consensus 232 ~~~ 234 (283)
T PRK13636 232 EKE 234 (283)
T ss_pred CHH
Confidence 543
No 419
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6.8e-37 Score=355.32 Aligned_cols=203 Identities=25% Similarity=0.415 Sum_probs=168.4
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcE
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTV 351 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i 351 (1293)
..|+++|++++|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|.... .+..|
T Consensus 40 ~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~i 116 (340)
T PRK13536 40 VAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARI 116 (340)
T ss_pred eeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccE
Confidence 4699999999996 357999999999999999999999999999999999999999984321 23469
Q ss_pred EEEcCCcccc-CccHHHHHccC-C--CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHH
Q 000774 352 AYVPQVSWIF-NATVRDNILFG-S--AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 423 (1293)
Q Consensus 352 ~~v~Q~~~l~-~~Tv~eni~~g-~--~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAr 423 (1293)
||+||++.++ ..|+.||+.+. . ..+. ++..+.++.+++.+.. .....+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-----------~~~~~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-----------DARVSDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------CCChhhCCHHHHHHHHHHH
Confidence 9999999886 78999999752 1 1121 2233444444443322 2334689999999999999
Q ss_pred HhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 424 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 424 al~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||+.+|+++||||||++|||.+++++++.+.+...+|+|+|++||+++.++. ||+|++|++|+++..|+++++.+.
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999998776655568999999999999975 899999999999999999998653
No 420
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.8e-37 Score=360.13 Aligned_cols=226 Identities=26% Similarity=0.451 Sum_probs=186.2
Q ss_pred cEEEEEEEEEecCCCC--CceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCC----cceEEECCeecCCCChHH
Q 000774 908 SIKFEDVVLRYRPELP--PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE----RGRILIDGFDIAKFGLMD 981 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~--~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~----~G~I~i~g~~i~~~~~~~ 981 (1293)
.++++|+++.|..... ++++||||+|.+||++||||.|||||||+.++|.|++++. +|+|.++|.|+-.++...
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 4899999999964332 4899999999999999999999999999999999999988 899999999998888766
Q ss_pred Hh----hhceEEccccc-cccc--cHhhhcC----CCCCC----CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCC
Q 000774 982 LR----KILGIIPQSPV-LFSG--TVRFNLD----PFSEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1046 (1293)
Q Consensus 982 ~r----~~i~~v~Q~~~-lf~~--ti~~nl~----~~~~~----~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~L 1046 (1293)
.| ++|+|+||+|. .++. ||.+.+. ..... ..++..+.++.+++.+ .-.. +..++.|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~-------~~~~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPD-------PERR--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCC-------hhhh--ccCCccc
Confidence 54 35999999994 5553 6665543 11111 1222333344443322 1111 4467899
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEee
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1123 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 1123 (1293)
|||||||+.||+||+.+|++||+||||++||+.+...|.+.|+++. .+.++|+||||+..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999976 47999999999999988 99999999999999
Q ss_pred ecChhhhhhcCCChHHHHH
Q 000774 1124 YDTPEELLSNEGSSFSKMV 1142 (1293)
Q Consensus 1124 ~g~~~el~~~~~~~~~~l~ 1142 (1293)
.|+++++++++...|.+..
T Consensus 236 ~G~~~~i~~~p~hpYT~~L 254 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGL 254 (539)
T ss_pred ecCHHHHHhccCCcccHHH
Confidence 9999999988877787655
No 421
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2e-36 Score=330.20 Aligned_cols=190 Identities=24% Similarity=0.412 Sum_probs=161.3
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCc
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 350 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~ 350 (1293)
..++++|++++|+. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .+..
T Consensus 5 ~~l~~~~l~~~~~~-~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAP-DLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCC-CCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 45999999999963 2357999999999999999999999999999999999999999984321 2356
Q ss_pred EEEEcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCC
Q 000774 351 VAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 430 (1293)
Q Consensus 351 i~~v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~ 430 (1293)
|+|++|++.+|+.|++||+.+....+.+++.+.++ ++.....|||||+||++|||||+.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999899999998654443333333222 234567999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEecC
Q 000774 431 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 492 (1293)
Q Consensus 431 illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 492 (1293)
++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREE-FTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 99999999999999999998866544 46899999999999988899999999999998775
No 422
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-37 Score=305.45 Aligned_cols=220 Identities=27% Similarity=0.427 Sum_probs=183.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCC----------C
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----------F 977 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~----------~ 977 (1293)
.++++|+.++|+.. .+|++||++.++|+.+.|+|.|||||||+++||.=+-.|+.|.|.++|..+.- .
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 48999999999865 69999999999999999999999999999999999999999999999987742 1
Q ss_pred C---hHHHhhhceEEccccccccc-cHhhhcCCCC----CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChh
Q 000774 978 G---LMDLRKILGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 1049 (1293)
Q Consensus 978 ~---~~~~r~~i~~v~Q~~~lf~~-ti~~nl~~~~----~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgG 1049 (1293)
+ ...+|.+.|+|+|+..|++. |+.||..-.+ ..+..+.. ++ +..++.+ .|+......-+..||||
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~---e~--Ae~~L~k--VGi~ek~~~YP~~LSGG 156 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAI---ER--AEKYLAK--VGIAEKADAYPAHLSGG 156 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHH---HH--HHHHHHH--hCchhhhhcCccccCch
Confidence 2 33468889999999999976 9999984221 11222211 11 1223333 24555555556789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecCh
Q 000774 1050 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1127 (1293)
Q Consensus 1050 qkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 1127 (1293)
|+||++|||||..+|+++++|||||+|||+-.-++.+.++++. .|+|+++|||.|.+..+ +.+|+.+.+|.|-|+|+|
T Consensus 157 QQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P 236 (256)
T COG4598 157 QQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPP 236 (256)
T ss_pred HHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCCh
Confidence 9999999999999999999999999999999999999999876 48999999999999988 899999999999999999
Q ss_pred hhhhhcCCC
Q 000774 1128 EELLSNEGS 1136 (1293)
Q Consensus 1128 ~el~~~~~~ 1136 (1293)
+++..++.+
T Consensus 237 ~qvf~nP~S 245 (256)
T COG4598 237 EQVFGNPQS 245 (256)
T ss_pred HHHhcCCCC
Confidence 999976543
No 423
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-37 Score=358.01 Aligned_cols=204 Identities=25% Similarity=0.402 Sum_probs=171.4
Q ss_pred CCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcE
Q 000774 282 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTV 351 (1293)
Q Consensus 282 ~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i 351 (1293)
...|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|.... .++.|
T Consensus 17 ~~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i 93 (377)
T PRK11607 17 TPLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPI 93 (377)
T ss_pred CceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 34699999999996 357999999999999999999999999999999999999999984321 13469
Q ss_pred EEEcCCcccc-CccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHH
Q 000774 352 AYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 423 (1293)
Q Consensus 352 ~~v~Q~~~l~-~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAr 423 (1293)
|||+|++.+| ..||.|||.|+.. .+. +++.+.++..++.+..+..| .+|||||||||+|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 9999999998 5699999998732 122 34455666666665444433 589999999999999
Q ss_pred HhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 424 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 424 al~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||+.+|++|||||||++||+.+++++.+.+.+..+ .|.|+|+|||+++++. .||+|++|++|++++.|+++++..+
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999876655433 4899999999999865 5899999999999999999998765
No 424
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.6e-37 Score=334.72 Aligned_cols=190 Identities=31% Similarity=0.528 Sum_probs=157.0
Q ss_pred EEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------ecCcEEEEcCCc
Q 000774 286 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------IRGTVAYVPQVS 358 (1293)
Q Consensus 286 ~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------~~~~i~~v~Q~~ 358 (1293)
+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++|++|++
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~ 77 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRR 77 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecccc
Confidence 36899999962 57999999999999999999999999999999999999999984322 134699999998
Q ss_pred cc---cCccHHHHHccCCCC-----------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 359 WI---FNATVRDNILFGSAF-----------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 359 ~l---~~~Tv~eni~~g~~~-----------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
.+ ++.||+||+.++... ..+++.++++..++.+..+. ...+||||||||++||||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~a 146 (213)
T cd03235 78 SIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRVLLARA 146 (213)
T ss_pred ccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHHH
Confidence 76 568999999875321 12345566777777654443 335899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEe
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEE 490 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~ 490 (1293)
|+.+|+++||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||+|++|++| +++.
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999998766544468999999999999865 8999999886 4544
No 425
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.1e-36 Score=338.37 Aligned_cols=200 Identities=24% Similarity=0.393 Sum_probs=163.9
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCcE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 351 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~i 351 (1293)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 47899999996 357999999999999999999999999999999999999999984321 12359
Q ss_pred EEEcCCccccC-ccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHH
Q 000774 352 AYVPQVSWIFN-ATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 423 (1293)
Q Consensus 352 ~~v~Q~~~l~~-~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAr 423 (1293)
+|++|++.+|. .|++||+.++.. ... +++.+.++..++.+ .......+||||||||++|||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~ 146 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEIAR 146 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHHHH
Confidence 99999998886 599999987531 111 12233444444432 234455789999999999999
Q ss_pred HhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhh
Q 000774 424 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 424 al~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
||+.+|++|||||||++||+.+.+.+.+.+.....+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 147 ALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999999988665544468999999999987764 89999999999999999988754
No 426
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=346.08 Aligned_cols=205 Identities=24% Similarity=0.425 Sum_probs=168.0
Q ss_pred cEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 284 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
.|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|....
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 257999999999999999999999999999999999999999984211
Q ss_pred -ecCcEEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCCh-hHHhcCCCCCcccccCCCCCCChHH
Q 000774 347 -IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQ-HDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 347 -~~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~-~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
.+..|+|++|+| .+|..|+.|||.++.. ... +++.+.++.+++. +.. .....+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLI-----------SKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-----------hCCcccCCHHH
Confidence 123599999998 4678899999987521 222 2344555666654 222 33456899999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||++|||||+.+|++|||||||++||+.+.+++.+.+.....+|.|+|++||+++++. .||++++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998866554446899999999999986 58999999999999999999
Q ss_pred HHhhc
Q 000774 495 DLSNN 499 (1293)
Q Consensus 495 ~l~~~ 499 (1293)
++.+.
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 88654
No 427
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-36 Score=330.76 Aligned_cols=194 Identities=25% Similarity=0.343 Sum_probs=163.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ...+++++|
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDER--ILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECCE--EEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 7899999999753 6999999999999999999999999999999999999999999999999987643 456778999
Q ss_pred Ecccccccc-ccHhhhcCCCCC----CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000774 989 IPQSPVLFS-GTVRFNLDPFSE----HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1063 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~~----~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~ 1063 (1293)
++|++.++. .|++||+.+... ..++++.++++..++. ...+.....||||||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLA-----------GFEDVPVRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCH-----------HHhhCChhhcCHHHHHHHHHHHHHhcC
Confidence 999998886 499999964321 1223444455554443 333445678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhcc-CEEEEE
Q 000774 1064 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDC-DRILLL 1116 (1293)
Q Consensus 1064 p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~-d~i~vl 1116 (1293)
|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++++..| +|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999999864 478999999999999774 677665
No 428
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=341.93 Aligned_cols=206 Identities=24% Similarity=0.370 Sum_probs=168.5
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCCcee-----------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASAV----------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~-----~g~~~~----------- 346 (1293)
..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|....
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 3699999999996 357999999999999999999999999999999999999874 663211
Q ss_pred ---ecCcEEEEcCCccccCccHHHHHccCCC----CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHH
Q 000774 347 ---IRGTVAYVPQVSWIFNATVRDNILFGSA----FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 347 ---~~~~i~~v~Q~~~l~~~Tv~eni~~g~~----~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
.+..|+|++|++.+|..||+|||.++.. .+ .+++.++++.+++.+.+. + .......+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~----~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---D----KLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---H----HHhCCcccCCHHH
Confidence 2346999999999988999999987632 11 123444555555532221 1 1234567999999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||++|||||+.+|++|||||||++||+.+.+++++.+.+. .+++|+|++||+++++.. ||||++|++|++++.|+++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 234 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINL-KESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTD 234 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998865554 457899999999999864 8999999999999999999
Q ss_pred HHhhc
Q 000774 495 DLSNN 499 (1293)
Q Consensus 495 ~l~~~ 499 (1293)
++.++
T Consensus 235 ~~~~~ 239 (254)
T PRK14273 235 ELFFN 239 (254)
T ss_pred HHHhC
Confidence 88654
No 429
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-36 Score=334.19 Aligned_cols=193 Identities=31% Similarity=0.462 Sum_probs=159.4
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAYV 354 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~v 354 (1293)
|+++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 478999999963 57999999999999999999999999999999999999999884321 12359999
Q ss_pred cCCcccc-CccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhh
Q 000774 355 PQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 426 (1293)
Q Consensus 355 ~Q~~~l~-~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~ 426 (1293)
+|++.++ ..|++||+.++.. ... +++.+.++..++.+..+ ....+||||||||++|||||+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLD-----------RKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHh-----------CChhhCCHHHHHHHHHHHHHh
Confidence 9999887 5799999987521 122 23344556666554433 334689999999999999999
Q ss_pred cCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEec
Q 000774 427 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 491 (1293)
Q Consensus 427 ~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g 491 (1293)
.+|+++||||||++||+.+.+++.+.+.+... .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999986655443 48999999999998875 8999999999998765
No 430
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-36 Score=335.87 Aligned_cols=200 Identities=29% Similarity=0.504 Sum_probs=162.0
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCcE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 351 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~i 351 (1293)
|+++|++++|+ ++++|+|+||++++||++||+||||||||||+++|+|+++|++|.... .+..+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 47899999996 357999999999999999999999999999999999999999884321 13459
Q ss_pred EEEcCCccccC-ccHHHHHccCCCCC--H---HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 352 AYVPQVSWIFN-ATVRDNILFGSAFE--P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 352 ~~v~Q~~~l~~-~Tv~eni~~g~~~~--~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
+|++|++.+|. .|++||+.++.... . ++..+.++.. ..++ ........+||||||||++|||||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~~l~----~~~~~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------PRLK----ERRKQLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------Hhhh----hhhhCchhhCCHHHHHHHHHHHHH
Confidence 99999998876 59999998763221 1 1122222222 1111 123455678999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHh
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
+.+|+++||||||++||+.+.+.+++.+.+...+++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999998665544468999999999998765 8999999999999999887764
No 431
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=341.64 Aligned_cols=206 Identities=23% Similarity=0.365 Sum_probs=169.0
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCCcee-----------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAV----------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~-----~~~g~~~~----------- 346 (1293)
+.|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|....
T Consensus 5 ~~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 4699999999996 3579999999999999999999999999999999999864 46773211
Q ss_pred ---ecCcEEEEcCCccccCccHHHHHccCCC---C-C----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHH
Q 000774 347 ---IRGTVAYVPQVSWIFNATVRDNILFGSA---F-E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 347 ---~~~~i~~v~Q~~~l~~~Tv~eni~~g~~---~-~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
.+..|+|++|++.+|..||+||+.++.. . . .+++.++++.+++.+.+. +.++....+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHH
Confidence 1346999999999988899999987521 1 1 234455566666644322 12345567999999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||++|||||+.+|++|||||||++||+.+.+++.+.+.+. .+++|+|++||+++++. .||+|++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHEL-KARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-hcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998866544 45789999999999986 48999999999999999998
Q ss_pred HHhhc
Q 000774 495 DLSNN 499 (1293)
Q Consensus 495 ~l~~~ 499 (1293)
++.+.
T Consensus 234 ~~~~~ 238 (253)
T PRK14242 234 QIFTR 238 (253)
T ss_pred HHHcC
Confidence 88654
No 432
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=344.34 Aligned_cols=207 Identities=28% Similarity=0.419 Sum_probs=173.8
Q ss_pred cEEEEeeEEEcCCCC---CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------e
Q 000774 284 AISIRNGYFSWDSKA---ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------I 347 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~---~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~ 347 (1293)
.++++|++++|+... ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999997421 357999999999999999999999999999999999999999884211 2
Q ss_pred cCcEEEEcCCcc--ccCccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 348 RGTVAYVPQVSW--IFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 348 ~~~i~~v~Q~~~--l~~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
++.+||++|+|. ++..|+.+|+.|+.. .+ .+++.++++.+++.+..+..+ .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 346999999984 567799999988631 12 234566777778776655444 5899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHh
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
++|||||+.+|+++||||||++||+.+.+.+.+.+.+... .|.|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999886655433 489999999999999889999999999999999999987
Q ss_pred hccH
Q 000774 498 NNGE 501 (1293)
Q Consensus 498 ~~~~ 501 (1293)
....
T Consensus 233 ~~~~ 236 (280)
T PRK13633 233 KEVE 236 (280)
T ss_pred cChH
Confidence 6543
No 433
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.7e-36 Score=337.58 Aligned_cols=201 Identities=20% Similarity=0.370 Sum_probs=166.0
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----e-------cCcEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----I-------RGTVAY 353 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----~-------~~~i~~ 353 (1293)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... + +..++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 78999999996 357999999999999999999999999999999999999999984321 1 135999
Q ss_pred EcCCccc-cCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWI-FNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l-~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
++|++.+ +..|++||+.++.. ... ++..+.++..++.+ ..+....+||||||||++|||||
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAE-----------RADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHHHHHHHH
Confidence 9999987 57899999986521 121 12333444444432 23455678999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhc
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
+.+|+++||||||++||+.+.+++.+.+.+... +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999986655442 58999999999999988999999999999999999887654
No 434
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=343.90 Aligned_cols=207 Identities=23% Similarity=0.344 Sum_probs=172.3
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.|+++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .+..|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 589999999997432346999999999999999999999999999999999999999984321 23469
Q ss_pred EEEcCCcc--ccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~~--l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
+|++|++. ++..||.|||.++.. ... +++..+++.+++.+..+. ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 99999984 568899999987521 222 234566677777654433 3468999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhccH
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGE 501 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 501 (1293)
|||+.+|+++||||||++||+.+.+.+.+.+.+...+ |.|+|++||+++++..||+|++|++|++++.|+++++....+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 9999999999999999999999999999866554443 899999999999998899999999999999999999876543
No 435
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=343.90 Aligned_cols=206 Identities=24% Similarity=0.394 Sum_probs=171.9
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCC--Ccee-------------e
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSD--ASAV-------------I 347 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g--~~~~-------------~ 347 (1293)
..|+++|++|+|+. ..+++|+|+||+|++||+++|+||||||||||+++|+|+++|++| +.+. .
T Consensus 4 ~~l~i~~l~~~~~~-~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPD-SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCC-CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 36899999999963 235799999999999999999999999999999999999999873 2222 1
Q ss_pred cCcEEEEcCCcc--ccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 348 RGTVAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 348 ~~~i~~v~Q~~~--l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
+..|||++|++. +++.||.|||.++.. .+. +++.++++.+++.+..+..+ .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 346999999984 568899999987622 222 23556677777765554443 5899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHh
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 497 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 497 (1293)
++|||||+.+|+++||||||++||+.+.+++.+.+..... .|+|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999886655443 389999999999999889999999999999999999886
Q ss_pred hcc
Q 000774 498 NNG 500 (1293)
Q Consensus 498 ~~~ 500 (1293)
...
T Consensus 232 ~~~ 234 (282)
T PRK13640 232 SKV 234 (282)
T ss_pred cCH
Confidence 643
No 436
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=7.1e-35 Score=383.61 Aligned_cols=94 Identities=14% Similarity=0.243 Sum_probs=84.9
Q ss_pred hhcCCCCCChhHHHHHHHHHHhccC--CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhccCEEEE
Q 000774 1039 VSEAGENFSVGQRQLLSLSRALLRR--SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILL 1115 (1293)
Q Consensus 1039 ~~~~~~~LSgGqkqrl~lArall~~--p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~v 1115 (1293)
+++...+|||||-||+-||+.|-.+ -=++||||||.||-+.....+.+.|+++. .|.|||+|-||.++++.||+|+-
T Consensus 1381 L~R~~~TLSGGE~QRirLa~~lgs~L~gvlYVLDEPSiGLHp~D~~~Li~~L~~Lrd~GNTvivVEHd~~~i~~AD~iid 1460 (1809)
T PRK00635 1381 LGQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLSGLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEHADHLIH 1460 (1809)
T ss_pred ccCCCCCCcchHHHHHHHHHHhcCCCceeEEEeCCCCcCCChhHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEE
Confidence 3466778999999999999999876 35788999999999999999999999987 48999999999999999999999
Q ss_pred E------eCCeEeeecChhhhhh
Q 000774 1116 L------DSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1116 l------~~G~i~~~g~~~el~~ 1132 (1293)
| ..|+|+.+|+++++..
T Consensus 1461 iGPgAG~~GG~iv~~G~~~~l~~ 1483 (1809)
T PRK00635 1461 LGPGSGPQGGYLLSTSALKQSQP 1483 (1809)
T ss_pred eCCCccCCCCEEEecCCHHHHhh
Confidence 8 4699999999999974
No 437
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.9e-37 Score=300.51 Aligned_cols=209 Identities=27% Similarity=0.366 Sum_probs=172.2
Q ss_pred cEEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHH---H
Q 000774 908 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 982 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~---~ 982 (1293)
.|++++++++.+.. .-.+|++|+|.|++||.+|||||||||||||+-+++|+-+|++|+|.+.|+++.+++.+. +
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 48889998887542 236899999999999999999999999999999999999999999999999999888554 3
Q ss_pred h-hhceEEcccccccc-ccHhhhcCCC----CCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 000774 983 R-KILGIIPQSPVLFS-GTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1056 (1293)
Q Consensus 983 r-~~i~~v~Q~~~lf~-~ti~~nl~~~----~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~l 1056 (1293)
| +++|+|+|...|.. .|-.||...- ++...+. .....+++++ .|+...+...+.+|||||+||++|
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~------~~~A~~lL~~--vGLg~Rl~HyP~qLSGGEQQRVAi 157 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADS------RAGAKALLEA--VGLGKRLTHYPAQLSGGEQQRVAL 157 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccH------HHHHHHHHHH--hCcccccccCccccCchHHHHHHH
Confidence 3 46999999998875 5999998531 1111111 1112233333 244455555667899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhccCEEEEEeCCeEeee
Q 000774 1057 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1124 (1293)
Q Consensus 1057 Arall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 1124 (1293)
|||+...|+||+-||||-+||.+|-+.|.+.+..+. .+.|.++||||.....+|||++-|.+|++++.
T Consensus 158 ARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 158 ARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 999999999999999999999999999999998765 47899999999999999999999999999753
No 438
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.9e-36 Score=328.29 Aligned_cols=195 Identities=23% Similarity=0.315 Sum_probs=162.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....|++++|
T Consensus 2 l~~~~l~~~~~~~--~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHDQ--PLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCCe--eEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999998865 34567889999
Q ss_pred Ecccccccc-ccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000774 989 IPQSPVLFS-GTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1067 (1293)
Q Consensus 989 v~Q~~~lf~-~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iL 1067 (1293)
+||++.++. .|+++|+.+.......+ ..+.+.++.+ ++....+....+||||||||++||||++++|++|
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~l 149 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGA-------VGITELCRLF--SLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLW 149 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcch-------HHHHHHHHHc--CCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999998874 69999987431111110 1233444443 2333344455679999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhccCEEEE
Q 000774 1068 VLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILL 1115 (1293)
Q Consensus 1068 lLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~v 1115 (1293)
||||||++||+.+.+.+.+.|++.. .++|+|++||+.+.+..||.-.+
T Consensus 150 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 150 LLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999999999864 47899999999999999997654
No 439
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.5e-36 Score=338.59 Aligned_cols=205 Identities=28% Similarity=0.400 Sum_probs=167.8
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCCcee------------
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASAV------------ 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~-----~g~~~~------------ 346 (1293)
.++++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|....
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 3789999999963 46999999999999999999999999999999999999987 774211
Q ss_pred --ecCcEEEEcCCccccCccHHHHHccCCC----CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 347 --IRGTVAYVPQVSWIFNATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 347 --~~~~i~~v~Q~~~l~~~Tv~eni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
.+..|+|+||++.+|..|++||+.++.. .+. +++.++++..++...+. ........+||||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQ 150 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHH
Confidence 1346999999999988999999987521 111 23455566666653221 123345579999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||++|||||+.+|+++||||||++||+.+.+.+++.+.+. .+++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 229 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQEL-KKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQ 229 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999998765543 34589999999999886 489999999999999999988
Q ss_pred Hhhc
Q 000774 496 LSNN 499 (1293)
Q Consensus 496 l~~~ 499 (1293)
+.+.
T Consensus 230 ~~~~ 233 (247)
T TIGR00972 230 IFTN 233 (247)
T ss_pred HHhC
Confidence 7643
No 440
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=339.78 Aligned_cols=205 Identities=21% Similarity=0.333 Sum_probs=169.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC---CCCCCcee------------ec
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP---PVSDASAV------------IR 348 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~---~~~g~~~~------------~~ 348 (1293)
.|+++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|.... .+
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 478999999996 3579999999999999999999999999999999999984 57774221 23
Q ss_pred CcEEEEcCCccccCccHHHHHccCCCC---------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 349 GTVAYVPQVSWIFNATVRDNILFGSAF---------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 349 ~~i~~v~Q~~~l~~~Tv~eni~~g~~~---------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
..|+|+||++.+|..|++||+.++... ..+++.+.++.+++...+.. .....+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 469999999999989999999875211 11234556677776544332 23445679999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhh
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
+|||||+.+|+++||||||++||+.+..++.+.+.+. .+++|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKEL-SHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHH-hCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999998866554 45899999999999886 589999999999999999998764
Q ss_pred c
Q 000774 499 N 499 (1293)
Q Consensus 499 ~ 499 (1293)
.
T Consensus 231 ~ 231 (246)
T PRK14269 231 N 231 (246)
T ss_pred C
Confidence 3
No 441
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-36 Score=344.20 Aligned_cols=203 Identities=29% Similarity=0.507 Sum_probs=173.9
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVA 352 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~ 352 (1293)
.++++|+++.|+. ++.+|+||||+|++|+++|++||||||||||+++|+|++.|++|.... .+++||
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 4788999999962 468999999999999999999999999999999999999999984322 234699
Q ss_pred EEcCCcccc-CccHHHHHccCC-----C--CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIF-NATVRDNILFGS-----A--FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~-~~Tv~eni~~g~-----~--~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
|+||+|.++ ..|++||+.|.. + .+.+++.+.++..++.+.. .....+||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHHH
Confidence 999999886 689999998742 1 1245677888888877622 22346899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCC-cEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSG-KTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~-~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|+.+|++|||||||+||||.++..+++.+.....+| +||+++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 999999999999999999999999998777666666 799999999999986 899999999999999998886543
No 442
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2e-36 Score=333.66 Aligned_cols=199 Identities=27% Similarity=0.503 Sum_probs=164.4
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVAY 353 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~~ 353 (1293)
|+++|+++.|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .++.++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4789999999631 267999999999999999999999999999999999999999984321 1345999
Q ss_pred EcCCcccc-CccHHHHHccCC---CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWIF-NATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l~-~~Tv~eni~~g~---~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
++|++.++ ..|++||+.++. .... +++.++++..++.+..+ ....+||||||||++|||||
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKAN-----------KRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-----------ChhhhCCHHHHHHHHHHHHH
Confidence 99999887 689999998642 1121 33455666666654332 23468999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
+.+|+++||||||++||+.+.+++.+.+.+. .+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEV-RKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999998865543 446899999999999865 899999999999999988764
No 443
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.1e-36 Score=372.54 Aligned_cols=210 Identities=20% Similarity=0.245 Sum_probs=178.1
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+....++.++|
T Consensus 4 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 4 LQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred EEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 8999999999753 59999999999999999999999999999999999999999999999988876676777788999
Q ss_pred Ecccccc--c-------cccHhhhcCCCCCCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 989 IPQSPVL--F-------SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 989 v~Q~~~l--f-------~~ti~~nl~~~~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
+||++.+ + ..|+++|+.... ..++++.++++.. |++...+....+||||||||++||||
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~la~a 149 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQF-----------GITALLDRRFKYLSTGETRKTLLCQA 149 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHHc-----------CCHhhhhCCcccCCHHHHHHHHHHHH
Confidence 9998753 2 348888875321 1122333444443 44444455667899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhhh
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1132 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 1132 (1293)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||+|||+++.+.. ||+|++|++|+++..|+++++.+
T Consensus 150 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 150 LMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999998654 6899999999999877 99999999999999999998864
No 444
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.8e-36 Score=334.17 Aligned_cols=193 Identities=24% Similarity=0.419 Sum_probs=157.8
Q ss_pred EEEEeeEEEcCCCC-CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ec
Q 000774 285 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 348 (1293)
Q Consensus 285 i~~~~~~~~y~~~~-~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~ 348 (1293)
++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996321 247999999999999999999999999999999999999999984321 01
Q ss_pred -CcEEEEcCCcccc-CccHHHHHccCC---CCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 349 -GTVAYVPQVSWIF-NATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 349 -~~i~~v~Q~~~l~-~~Tv~eni~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
..|+|++|++.+| ..|++||+.++. ..+ .+++.+.++..++.+..+ ....+||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRIN-----------HRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHH
Confidence 4699999999887 579999998642 122 123445555555543333 33468999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEE
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVK 488 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~ 488 (1293)
+|||||+.+|++|||||||++||+.+.+.+.+.+.+... .++|+|++||+++++..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999999886655433 479999999999999889999999999875
No 445
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.1e-36 Score=343.06 Aligned_cols=203 Identities=23% Similarity=0.358 Sum_probs=167.4
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------e
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------I 347 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~ 347 (1293)
..|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 3699999999996 357999999999999999999999999999999999999999884211 1
Q ss_pred cCcEEEEcCCccccC-ccHHHHHccCC----CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 348 RGTVAYVPQVSWIFN-ATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 348 ~~~i~~v~Q~~~l~~-~Tv~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
+..++|++|++.+|. .|+.||+.++. ..+. +++.+.++..++.+..+ ....+||||||||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qr 151 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAK-----------LMPSELSGGMARR 151 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 346999999999885 59999997641 1122 23334455555543332 2346899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
++|||||+.+|+++||||||++||+.+.+.+.+.+.....+ |+|+|+|||+++++.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 152 AALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999998866554333 7999999999998875 899999999999999999998
Q ss_pred hhc
Q 000774 497 SNN 499 (1293)
Q Consensus 497 ~~~ 499 (1293)
.+.
T Consensus 232 ~~~ 234 (269)
T PRK11831 232 QAN 234 (269)
T ss_pred hcC
Confidence 764
No 446
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=344.21 Aligned_cols=200 Identities=28% Similarity=0.402 Sum_probs=165.9
Q ss_pred EEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------------ecC
Q 000774 286 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------IRG 349 (1293)
Q Consensus 286 ~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------------~~~ 349 (1293)
.++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567777775 357999999999999999999999999999999999999999884321 024
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
.++|++|++.+| +.|+.||+.++.. .. .+++.+.++..++.+.++..+ .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 699999999887 6799999987421 11 234556677777765555444 4899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||+.+|++|||||||++||+.+.+.+.+.+..... .|+|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999886655433 4899999999999876 4899999999999999999988654
No 447
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=340.94 Aligned_cols=206 Identities=30% Similarity=0.442 Sum_probs=170.5
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCc
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 350 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~ 350 (1293)
..++++|++++|+. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... +++.
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 46999999999963 2467999999999999999999999999999999999999999884211 2446
Q ss_pred EEEEcCCcc--ccCccHHHHHccCCC---CCHH----HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVSW--IFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~~--l~~~Tv~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
|+|++|++. ++..||+||+.++.. .+.+ ++.+.++..++.+.++. ...+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 153 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAI 153 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHH
Confidence 999999984 457899999987521 2222 24455666666554443 346899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
||||+.+|++|||||||++||+.+.+.+++.+.+...+ ++|+|++||+++.+..||++++|++|++++.|+.+++....
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999999999866554444 58999999999998889999999999999999988876543
No 448
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.1e-36 Score=332.96 Aligned_cols=196 Identities=23% Similarity=0.397 Sum_probs=160.8
Q ss_pred EEEEeeEEEcCCCCC-CCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEE
Q 000774 285 ISIRNGYFSWDSKAE-RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVA 352 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~-~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~ 352 (1293)
|+++|++++|+.... +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.... .++.++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 789999999963211 27999999999999999999999999999999999999999984321 134699
Q ss_pred EEcCCccccC-ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~~-~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
|++|++.+|. .||+||+.+... .+ .+++.++++..++.+..+ ....+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLD-----------RRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-----------hhhhhcCHHHHHHHHHHHH
Confidence 9999998886 599999976421 11 133455566666544333 3456899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEec
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 491 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g 491 (1293)
|+.+|+++||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. +|++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999998766554568999999999998764 8999999999998754
No 449
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=373.65 Aligned_cols=212 Identities=22% Similarity=0.358 Sum_probs=177.7
Q ss_pred EEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChH-HHhhhceEE
Q 000774 911 FEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKILGII 989 (1293)
Q Consensus 911 ~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~-~~r~~i~~v 989 (1293)
++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+.++|+
T Consensus 1 ~~nl~~~~~~~--~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPGV--KALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCCE--EeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 36899999653 699999999999999999999999999999999999999999999999998765543 356789999
Q ss_pred ccccccccc-cHhhhcCCCCC------CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 990 PQSPVLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 990 ~Q~~~lf~~-ti~~nl~~~~~------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
||++.++.. |+++|+.+... ....+.. ..+.+.++.+ |++........+||||||||++|||||+.
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 999987754 99999874211 1111111 1233445553 55555566678899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 999999999999999999999999998864 47899999999999876 9999999999999999988864
No 450
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-36 Score=341.46 Aligned_cols=202 Identities=31% Similarity=0.448 Sum_probs=166.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------------
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------------- 346 (1293)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|....
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 489999999996 357999999999999999999999999999999999999999884311
Q ss_pred ---ecCcEEEEcCCcccc-CccHHHHHccCC----CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChH
Q 000774 347 ---IRGTVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 414 (1293)
Q Consensus 347 ---~~~~i~~v~Q~~~l~-~~Tv~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 414 (1293)
.+..++|++|++.++ ..|++||+.++. .... +++.+.++..++... ......+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G 148 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGK-----------ETSYPRRLSGG 148 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcch-----------hhCChhhCChH
Confidence 134699999999887 579999997641 1121 223344444444322 23455799999
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecCh
Q 000774 415 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 493 (1293)
Q Consensus 415 qkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 493 (1293)
||||++|||||+.+|++|||||||++||+.+.+++.+.+.....+|+|+|++||+++++.. ||+|++|++|++++.|++
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~ 228 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPA 228 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999988665544458999999999999865 899999999999999999
Q ss_pred HHHhhc
Q 000774 494 EDLSNN 499 (1293)
Q Consensus 494 ~~l~~~ 499 (1293)
+++.+.
T Consensus 229 ~~~~~~ 234 (250)
T PRK11264 229 KALFAD 234 (250)
T ss_pred HHHhcC
Confidence 887643
No 451
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.4e-36 Score=336.13 Aligned_cols=201 Identities=29% Similarity=0.447 Sum_probs=166.1
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee--------------ecCc
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IRGT 350 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------~~~~ 350 (1293)
++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.... .+..
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 78999999996 357999999999999999999999999999999999999999984211 1336
Q ss_pred EEEEcCCcccc-CccHHHHHccCC----CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
++|++|++.++ ..||+||+.++. ..+. +++.++++..++.... ......||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERA-----------HHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHH-----------hcChhhcCHHHHHHHHH
Confidence 99999999887 579999998752 1111 2234445555544333 33446899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||+.+|+++||||||++||+.+.+++.+.+.+...+++|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999988665544458999999999999865 899999999999999999887654
No 452
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.9e-36 Score=333.09 Aligned_cols=197 Identities=25% Similarity=0.383 Sum_probs=162.4
Q ss_pred CcEEEEeeEEEcCCCCC-CCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----e----------
Q 000774 283 PAISIRNGYFSWDSKAE-RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----I---------- 347 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~-~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----~---------- 347 (1293)
+.|+++|++++|+++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... +
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 36899999999974211 35999999999999999999999999999999999999999984321 0
Q ss_pred --cCcEEEEcCCccccC-ccHHHHHccCC---CCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHH
Q 000774 348 --RGTVAYVPQVSWIFN-ATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 417 (1293)
Q Consensus 348 --~~~i~~v~Q~~~l~~-~Tv~eni~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkq 417 (1293)
+..++|++|++.++. .|+.||+.++. ..+ .+++.+.++..++.+..+..+ .+|||||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~q 153 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQ 153 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHH
Confidence 146999999998875 69999997642 111 234556677777765544433 589999999
Q ss_pred HHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEEEe
Q 000774 418 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 490 (1293)
Q Consensus 418 RialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~ 490 (1293)
|++|||||+.+|+++||||||++||+.+.+++++.+.+... .|+|+|++||+++++..||++++|++|++++.
T Consensus 154 rl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 154 RVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999886655433 37899999999999988999999999998753
No 453
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.6e-36 Score=329.60 Aligned_cols=195 Identities=24% Similarity=0.344 Sum_probs=163.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhce
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 987 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 987 (1293)
.++++|++++|++. ++++++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNEE--PVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCCc--eeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 48999999999753 699999999999999999999999999999999999999999999999988642 3456799
Q ss_pred EEccccccccc-cHhhhcCCCC---CC-CHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000774 988 IIPQSPVLFSG-TVRFNLDPFS---EH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1062 (1293)
Q Consensus 988 ~v~Q~~~lf~~-ti~~nl~~~~---~~-~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~ 1062 (1293)
|+||++.++.. |+++|+.... .. .++.+.+.++.. ++....+.....||||||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIV-----------GLAGYEDTLVRQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHc-----------CChhhccCChhhCCHHHHHHHHHHHHHhc
Confidence 99999998876 9999985421 11 112223333332 33333455567899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeC
Q 000774 1063 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDS 1118 (1293)
Q Consensus 1063 ~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~ 1118 (1293)
+|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998754 46899999999999977 999999864
No 454
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=339.73 Aligned_cols=204 Identities=28% Similarity=0.439 Sum_probs=168.4
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------- 346 (1293)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|....
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 3589999999996 357999999999999999999999999999999999999999883211
Q ss_pred ---------ecCcEEEEcCCccccC-ccHHHHHccCC----CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCC
Q 000774 347 ---------IRGTVAYVPQVSWIFN-ATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERG 408 (1293)
Q Consensus 347 ---------~~~~i~~v~Q~~~l~~-~Tv~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g 408 (1293)
.+..++|+||++.++. .|++||+.++. .... ++..+.++..++.+.. .+...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 1346999999999885 69999997642 1121 2344455555554332 12345
Q ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeE
Q 000774 409 VNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 487 (1293)
Q Consensus 409 ~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i 487 (1293)
.+||||||||++|||||+++|+++||||||++||+.+.+++.+.+.+...+|+|+|+|||+++++.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6899999999999999999999999999999999999999998665544468999999999999985 899999999999
Q ss_pred EEecChHHHhhc
Q 000774 488 KEEGTFEDLSNN 499 (1293)
Q Consensus 488 ~~~g~~~~l~~~ 499 (1293)
++.|+++++...
T Consensus 231 ~~~~~~~~~~~~ 242 (257)
T PRK10619 231 EEEGAPEQLFGN 242 (257)
T ss_pred EEeCCHHHhhhC
Confidence 999999887643
No 455
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-36 Score=337.99 Aligned_cols=204 Identities=26% Similarity=0.422 Sum_probs=165.7
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 352 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i~ 352 (1293)
++++|++++|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGG--GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCC--cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 468999999963 157999999999999999999999999999999999999999884321 134699
Q ss_pred EEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
|++|++.+| ..||+||+.++.. .+ .+++.+.++..++... ......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---------~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPA---------EFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcH---------HHHhcChhhCCHHHHHHHHHHHH
Confidence 999999887 5799999987521 12 1234445555555420 01234557899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|+.+|+++||||||++||+.+.+++.+.+.+... .|+|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999887665444 3899999999999876 4899999999999999998887543
No 456
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=343.24 Aligned_cols=207 Identities=24% Similarity=0.408 Sum_probs=167.5
Q ss_pred cEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------
Q 000774 284 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------- 346 (1293)
.|+++|++++|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|....
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999996321 147999999999999999999999999999999999999999884311
Q ss_pred -ecCcEEEEcCCc--cccCccHHHHHccCCC---CCHH----HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 347 -IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 347 -~~~~i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
.+..|+|++|++ .+|+.|++||+.++.. .+.+ +..++++..++... .......+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~ 151 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQM 151 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 124599999997 5778899999987521 2222 22334444454321 12344578999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||++|||||+.+|++|||||||++||+.+.+.+.+.+.+...+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKD 231 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999998876654445899999999999886 489999999999999999998
Q ss_pred Hhhcc
Q 000774 496 LSNNG 500 (1293)
Q Consensus 496 l~~~~ 500 (1293)
+.+..
T Consensus 232 ~~~~~ 236 (280)
T PRK13649 232 IFQDV 236 (280)
T ss_pred HhcCH
Confidence 86643
No 457
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=330.40 Aligned_cols=193 Identities=24% Similarity=0.412 Sum_probs=158.9
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee--------ecCcEEEEcC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------IRGTVAYVPQ 356 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------~~~~i~~v~Q 356 (1293)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 47899999996 357999999999999999999999999999999999999999984321 1346999999
Q ss_pred CccccC-ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcC
Q 000774 357 VSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 428 (1293)
Q Consensus 357 ~~~l~~-~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~ 428 (1293)
++.++. .|++||+.++.. .. .+++.+.++..++.... .....+||||||||++|||||+.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHHHhcC
Confidence 998875 699999976421 11 12344455555554333 234468999999999999999999
Q ss_pred CCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEec
Q 000774 429 SDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 491 (1293)
Q Consensus 429 ~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g 491 (1293)
|+++||||||++||+.+.+++.+.+.+...+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998765544468999999999999865 8999999999998654
No 458
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=371.97 Aligned_cols=211 Identities=26% Similarity=0.368 Sum_probs=176.3
Q ss_pred cEEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCCh-HHHhhhc
Q 000774 908 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL-MDLRKIL 986 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~-~~~r~~i 986 (1293)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++|
T Consensus 4 ~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPGV--KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECCE--EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 38999999999753 69999999999999999999999999999999999999999999999999875544 3457789
Q ss_pred eEEccccccccc-cHhhhcCCCCC------CCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 000774 987 GIIPQSPVLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 987 ~~v~Q~~~lf~~-ti~~nl~~~~~------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
+|+||++.+|.. |+++|+.+... ....+.. ..+.++++.+ |++........+||||||||++||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lara 154 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHHH
Confidence 999999988875 99999975311 1111111 1233455554 44444455667899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecCh
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1127 (1293)
Q Consensus 1060 ll~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 1127 (1293)
|+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||||++|++|++++.++.
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 999999999999999999999999999999865 47899999999999877 999999999999877654
No 459
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=333.76 Aligned_cols=203 Identities=26% Similarity=0.376 Sum_probs=164.9
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecC
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 349 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~ 349 (1293)
..++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 80 (237)
T PRK11614 4 VMLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMRE 80 (237)
T ss_pred cEEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHh
Confidence 3589999999996 367999999999999999999999999999999999999999884211 134
Q ss_pred cEEEEcCCccccC-ccHHHHHccCCC-CCHHH----HHHHHHHc-CChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 350 TVAYVPQVSWIFN-ATVRDNILFGSA-FEPAR----YEKAIDVT-SLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 350 ~i~~v~Q~~~l~~-~Tv~eni~~g~~-~~~~~----~~~~~~~~-~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
.++|++|++.+|. .||+||+.++.. ....+ ..++++.. ++.+ .......+||||||||++||
T Consensus 81 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 149 (237)
T PRK11614 81 AVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-----------RRIQRAGTMSGGEQQMLAIG 149 (237)
T ss_pred CEEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-----------HHhCchhhCCHHHHHHHHHH
Confidence 5999999998886 699999987532 11111 12222222 1111 12334578999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|||+.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++. .||++++|++|++++.|+++++...
T Consensus 150 ~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 150 RALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred HHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999998876654456899999999999765 5899999999999999999998653
No 460
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-36 Score=337.92 Aligned_cols=206 Identities=27% Similarity=0.378 Sum_probs=169.6
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCCcee-----------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAV----------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~-----~~~g~~~~----------- 346 (1293)
..++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|....
T Consensus 12 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 46999999999962 579999999999999999999999999999999999986 46773211
Q ss_pred ---ecCcEEEEcCCccccCccHHHHHccCCC----CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHH
Q 000774 347 ---IRGTVAYVPQVSWIFNATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 347 ---~~~~i~~v~Q~~~l~~~Tv~eni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
.++.|+|++|++.+|..|++||+.++.. .+. +++.++++..++...+. ..++....+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHHH
Confidence 2346999999999888999999987532 222 33455666666543222 12445667999999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||++|||||+.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++.+. .||++++|++|++++.|+.+
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITEL-KQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998866544 45789999999999986 48999999999999999999
Q ss_pred HHhhc
Q 000774 495 DLSNN 499 (1293)
Q Consensus 495 ~l~~~ 499 (1293)
++.+.
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 88654
No 461
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.3e-36 Score=331.63 Aligned_cols=189 Identities=25% Similarity=0.452 Sum_probs=157.8
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ecC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 349 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~~ 349 (1293)
++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 357999999999999999999999999999999999999999884311 234
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
.++|++|++.+| ..|++||+.++.. .. .+++.+.++..++.+..+.. ..+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAF-----------PEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHH
Confidence 699999999987 5799999987521 11 23455666666665544433 35899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCe
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 486 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~ 486 (1293)
||||+.+|+++||||||++||+.+..++.+.+.....+|+|+|+|||+++++.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999998766544468999999999999875 89999999984
No 462
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-36 Score=334.68 Aligned_cols=201 Identities=27% Similarity=0.434 Sum_probs=165.0
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------------
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------- 346 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------------- 346 (1293)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|....
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 478999999996 357999999999999999999999999999999999999999884321
Q ss_pred -ecCcEEEEcCCccccC-ccHHHHHccCC----CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 347 -IRGTVAYVPQVSWIFN-ATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 347 -~~~~i~~v~Q~~~l~~-~Tv~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
.+..|+|+||++.+|. .|+.||+.++. .... +++.+.++..++....+ ....+||||||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~ 147 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYAD-----------RFPLHLSGGQQ 147 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHH
Confidence 1346999999999875 69999997421 1111 22344455555543333 34468999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||++|||||+.+|+++||||||++||+.+.+++.+.+.+...+|+|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 227 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999988665544458999999999999865 89999999999999999887
Q ss_pred Hhh
Q 000774 496 LSN 498 (1293)
Q Consensus 496 l~~ 498 (1293)
+..
T Consensus 228 ~~~ 230 (242)
T PRK11124 228 FTQ 230 (242)
T ss_pred hcC
Confidence 653
No 463
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=337.56 Aligned_cols=201 Identities=26% Similarity=0.432 Sum_probs=167.9
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.... .++.+
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 478999999996 357999999999999999999999999999999999999999984321 12359
Q ss_pred EEEcCCccccC-ccHHHHHccCCC-----C---C---HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHH
Q 000774 352 AYVPQVSWIFN-ATVRDNILFGSA-----F---E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 419 (1293)
Q Consensus 352 ~~v~Q~~~l~~-~Tv~eni~~g~~-----~---~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRi 419 (1293)
+|++|++.++. .|+.||+.++.. . . .+++.++++..++.+..+ .....||||||||+
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 147 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRA 147 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHH
Confidence 99999998875 499999987521 0 1 224455666666654433 33468999999999
Q ss_pred HHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhh
Q 000774 420 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 498 (1293)
Q Consensus 420 alAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 498 (1293)
+||||++.+|++|||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||++++|++|+++..|+++++..
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999999998866554445899999999999986 489999999999999999988765
No 464
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-36 Score=340.14 Aligned_cols=202 Identities=23% Similarity=0.374 Sum_probs=166.8
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee--------------ecCc
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IRGT 350 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------~~~~ 350 (1293)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 78999999996 357999999999999999999999999999999999999999984311 1246
Q ss_pred EEEEcCCcc--ccCccHHHHHccCC---CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVSW--IFNATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~~--l~~~Tv~eni~~g~---~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
|+|++|++. ++..|+.+|+.++. ..+. +++.++++..++.+..+ ....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-----------QPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-----------CCchhCCHHHHHHHHH
Confidence 999999985 46779999998741 1222 22344555666544332 2346899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
||||+.+|+++||||||++||+.+.+++.+.+.+...+|+|+|+|||+++.+. .||++++|++|++++.|+++++....
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACT 227 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999999998866654446899999999999986 48999999999999999998876543
No 465
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-36 Score=313.78 Aligned_cols=212 Identities=26% Similarity=0.448 Sum_probs=173.8
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecC
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 349 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~ 349 (1293)
+.++++|++..|+ ...+|++|||++++||+++|+|+||+|||||+++|+|+.+|.+|.+.. .+.
T Consensus 2 ~mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~ 78 (237)
T COG0410 2 PMLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARL 78 (237)
T ss_pred CceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhC
Confidence 3589999999996 368999999999999999999999999999999999999999884322 234
Q ss_pred cEEEEcCCcccc-CccHHHHHccCCCCCHH-HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhc
Q 000774 350 TVAYVPQVSWIF-NATVRDNILFGSAFEPA-RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 427 (1293)
Q Consensus 350 ~i~~v~Q~~~l~-~~Tv~eni~~g~~~~~~-~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~ 427 (1293)
.|+||||.-.+| +.||.||+.+|...... +.. ...+++..+.+|.- .......+.+|||||+|-+||||||..
T Consensus 79 Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP~L-ker~~~~aG~LSGGEQQMLAiaRALm~ 153 (237)
T COG0410 79 GIAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFPRL-KERRNQRAGTLSGGEQQMLAIARALMS 153 (237)
T ss_pred CeEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHChhH-HHHhcCcccCCChHHHHHHHHHHHHhc
Confidence 599999999998 78999999987432211 110 11133444555542 224567788999999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchh-hhCCeEEEEeCCeEEEecChHHHhhccHH
Q 000774 428 NSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNNGEL 502 (1293)
Q Consensus 428 ~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 502 (1293)
+|++|+|||||.+|-|...+.|++.+.+..++ |-||++|.++..+. +.+||.++|++|+|+.+|+.++|.++...
T Consensus 154 ~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~v 230 (237)
T COG0410 154 RPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPDV 230 (237)
T ss_pred CCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHHH
Confidence 99999999999999999999999877665544 66999999998875 56899999999999999999999887543
No 466
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=339.81 Aligned_cols=204 Identities=28% Similarity=0.441 Sum_probs=170.0
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.++++|++++|+. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .+..+
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4889999999963 346999999999999999999999999999999999999999984321 12359
Q ss_pred EEEcCCcc--ccCccHHHHHccCC---CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHH
Q 000774 352 AYVPQVSW--IFNATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 422 (1293)
Q Consensus 352 ~~v~Q~~~--l~~~Tv~eni~~g~---~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialA 422 (1293)
+|++|++. +++.||.||+.++. ..+. +++.+.++..++.+..+.. ...||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHH
Confidence 99999973 67889999998753 1232 2345566666776554443 358999999999999
Q ss_pred HHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 423 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 423 ral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
|||+.+|+++||||||++||+.+.+.+.+.+.....+ |.|+|++||+++++. .||||++|++|++++.|+++++.+..
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~~ 229 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQP 229 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcCH
Confidence 9999999999999999999999999998866554443 899999999999985 68999999999999999999987654
No 467
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-36 Score=335.09 Aligned_cols=202 Identities=21% Similarity=0.373 Sum_probs=165.3
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 488999999996 357999999999999999999999999999999999999999984321 1346
Q ss_pred EEEEcCCccccC-ccHHHHHccCCC----CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVSWIFN-ATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~~l~~-~Tv~eni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
++|++|++.++. .|+.||+.++.. .+. .++.+.++..++.+ .......+||||||||++|
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~l 148 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-----------LRDSMGQSLSGGERRRVEI 148 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-----------HhhcchhhCCHHHHHHHHH
Confidence 999999998875 699999987531 111 12333334333322 2344567899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||+.+|++|||||||++||+.+.+++.+.+.....+|+|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 149 ARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999998765544446899999999998775 5899999999999999999887653
No 468
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-36 Score=342.68 Aligned_cols=208 Identities=23% Similarity=0.379 Sum_probs=166.3
Q ss_pred CcEEEEeeEEEcCCCC--CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee--------------
Q 000774 283 PAISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~--~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------- 346 (1293)
..|+++|++++|+.+. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|....
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 3589999999996421 136999999999999999999999999999999999999999884311
Q ss_pred ---ecCcEEEEcCCcc--ccCccHHHHHccCCC---CCHH----HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChH
Q 000774 347 ---IRGTVAYVPQVSW--IFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 414 (1293)
Q Consensus 347 ---~~~~i~~v~Q~~~--l~~~Tv~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 414 (1293)
.++.|+|++|++. ++..|++||+.++.. ...+ ++.+.++..++.. + ..+....+||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-------~---~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPE-------D---YVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh-------h---HhcCChhhCCHH
Confidence 1346999999984 567899999987532 1221 2223344444321 1 123455789999
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecC
Q 000774 415 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGT 492 (1293)
Q Consensus 415 qkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~ 492 (1293)
||||++|||||+.+|++|||||||++||+.+.+.+++.+.+... .|+|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGS 234 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999886655433 4899999999999876 589999999999999999
Q ss_pred hHHHhhcc
Q 000774 493 FEDLSNNG 500 (1293)
Q Consensus 493 ~~~l~~~~ 500 (1293)
++++.+..
T Consensus 235 ~~~~~~~~ 242 (289)
T PRK13645 235 PFEIFSNQ 242 (289)
T ss_pred HHHHhcCH
Confidence 98886543
No 469
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=353.73 Aligned_cols=205 Identities=26% Similarity=0.400 Sum_probs=169.3
Q ss_pred cEEEEeeEEEcCCCC---------------------CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCC
Q 000774 284 AISIRNGYFSWDSKA---------------------ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSD 342 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~---------------------~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g 342 (1293)
.|+++|+++.|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 477777777775421 12379999999999999999999999999999999999999998
Q ss_pred Ccee----------------ecCcEEEEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCC
Q 000774 343 ASAV----------------IRGTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPG 398 (1293)
Q Consensus 343 ~~~~----------------~~~~i~~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~ 398 (1293)
.... .+..++|++|++.+| ..||+||+.++.. .+ .+++.+.++.+++.+..+..|
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-
Confidence 4321 024699999999988 5799999987631 12 234556677777766555444
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hC
Q 000774 399 GDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QV 476 (1293)
Q Consensus 399 g~~t~ig~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~ 476 (1293)
.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.+.+... .++|+|+|||+++++. .|
T Consensus 163 ----------~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~ 232 (400)
T PRK10070 163 ----------DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIG 232 (400)
T ss_pred ----------ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhC
Confidence 58999999999999999999999999999999999999999887665433 4899999999999876 58
Q ss_pred CeEEEEeCCeEEEecChHHHhhc
Q 000774 477 DRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 477 d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|+|++|++|++++.|+++++...
T Consensus 233 Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 233 DRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CEEEEEECCEEEecCCHHHHHhC
Confidence 99999999999999999998765
No 470
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=308.15 Aligned_cols=203 Identities=24% Similarity=0.392 Sum_probs=170.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVA 352 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~ 352 (1293)
.+++.+++++|++ ...+++||||++++||++||.|||||||||+|++|++++.|++|.... .+++||
T Consensus 1 Ml~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IG 78 (245)
T COG4555 1 MLEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIG 78 (245)
T ss_pred CeeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcc
Confidence 3688999999974 345899999999999999999999999999999999999999994322 456899
Q ss_pred EEcCCcccc-CccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~-~~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
+++-+.-++ ..|++|||.|... .. +.+..+..+..++.+.++ .+..++|-|+||||+||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~-----------rRv~~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLD-----------RRVGEFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHH-----------HHHhhhchhhHHHHHHHHH
Confidence 999777776 7899999986421 11 234444455555554443 3556899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|.+||++++|||||||||..+.+.+.+.+......|+++|+.||.++.++ .||+++++++|+++..|+.+++...
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999999999999999999998877766677999999999999998 5999999999999999999988654
No 471
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-36 Score=339.03 Aligned_cols=206 Identities=26% Similarity=0.378 Sum_probs=169.0
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCc
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 350 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~ 350 (1293)
+.++++|++++|++ ..+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .++.
T Consensus 6 ~~l~i~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 6 SIIVFKNVSFQYQS-DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred ceEEEEEEEEEcCC-CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 36999999999963 2356999999999999999999999999999999999999999984221 1345
Q ss_pred EEEEcCCcc--ccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~~--l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
++|++|++. ++..|+.+|+.++.. ... +++.++++..++.+..+ ....+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~l 153 (269)
T PRK13648 85 IGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAI 153 (269)
T ss_pred eeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHH
Confidence 999999985 457799999987632 122 23344555555544332 3446899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEeCCeEEEecChHHHhhcc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
|||++.+|+++||||||++||+.+.+.+++.+.+... .|+|+|+|||+++.+..||+|++|++|++++.|+++++....
T Consensus 154 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 233 (269)
T PRK13648 154 AGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHA 233 (269)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999886655433 379999999999998889999999999999999999886653
No 472
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-36 Score=338.62 Aligned_cols=203 Identities=27% Similarity=0.402 Sum_probs=169.1
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCc
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 350 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~ 350 (1293)
..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .++.
T Consensus 10 ~~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 86 (265)
T PRK10575 10 TTFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARK 86 (265)
T ss_pred ceEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhh
Confidence 4699999999996 357999999999999999999999999999999999999999984321 1235
Q ss_pred EEEEcCCcccc-CccHHHHHccCCC--------C---CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGSA--------F---EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 418 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~~--------~---~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqR 418 (1293)
++|++|++.++ ..|+.||+.++.. . ..+++.+.++.+++.+.++..+ .+||||||||
T Consensus 87 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qr 155 (265)
T PRK10575 87 VAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQR 155 (265)
T ss_pred eEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHH
Confidence 99999998765 5699999987521 0 1234566677777765544433 5899999999
Q ss_pred HHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHH
Q 000774 419 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 419 ialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 496 (1293)
++|||||+.+|++|||||||++||+.+.+.+.+.+..... .|+|+|++||+++++. .||+|++|++|++++.|+.+++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 156 AWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHh
Confidence 9999999999999999999999999999999886655433 3899999999999986 5899999999999999999887
Q ss_pred hhc
Q 000774 497 SNN 499 (1293)
Q Consensus 497 ~~~ 499 (1293)
...
T Consensus 236 ~~~ 238 (265)
T PRK10575 236 MRG 238 (265)
T ss_pred cCH
Confidence 653
No 473
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=340.66 Aligned_cols=202 Identities=25% Similarity=0.441 Sum_probs=168.1
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee--------------ecCc
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IRGT 350 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~--------------~~~~ 350 (1293)
++++|++++|+. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... ++..
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999962 357999999999999999999999999999999999999999884311 1346
Q ss_pred EEEEcCCc--cccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 351 VAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 351 i~~v~Q~~--~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
|+|++|++ .++..||.||+.++.. ... ++..++++.+++.+..+ ....+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFEN-----------KPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhc-----------CChhhCCHHHHHHHHH
Confidence 99999997 4678899999987531 121 23455666666653332 2346899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
||||+.+|+++||||||++||+.+..++.+.+.+...+|+|+|++||+++++. .||+|++|++|++++.|+++++...
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999876654445899999999999987 5899999999999999999988654
No 474
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.1e-36 Score=370.92 Aligned_cols=214 Identities=23% Similarity=0.400 Sum_probs=177.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC--CcceEEECCeecCCCChHH-Hhhh
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMD-LRKI 985 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p--~~G~I~i~g~~i~~~~~~~-~r~~ 985 (1293)
++++|++++|++. ++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+... .|+.
T Consensus 2 l~i~~l~~~~~~~--~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGGV--KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCCe--EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 7899999999643 699999999999999999999999999999999999987 7999999999998776554 3567
Q ss_pred ceEEccccccccc-cHhhhcCCCCC-------CCHHHHHHHHHHhhHHHHHHHccCCcchhh-hcCCCCCChhHHHHHHH
Q 000774 986 LGIIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQV-SEAGENFSVGQRQLLSL 1056 (1293)
Q Consensus 986 i~~v~Q~~~lf~~-ti~~nl~~~~~-------~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~-~~~~~~LSgGqkqrl~l 1056 (1293)
|||+||++.+|.. |+++|+.+... ...++.. ..+.+.++.+ |++... .....+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~i 152 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVEI 152 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHHH
Confidence 9999999988865 99999864321 1111111 1233445543 343322 33456899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhc-cCEEEEEeCCeEeeecChhhhh
Q 000774 1057 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1131 (1293)
Q Consensus 1057 Arall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 1131 (1293)
||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999998864 46899999999999977 9999999999999999887653
No 475
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.5e-36 Score=346.85 Aligned_cols=207 Identities=22% Similarity=0.334 Sum_probs=169.0
Q ss_pred CcEEEEeeEEEcCCCC----------CCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------
Q 000774 283 PAISIRNGYFSWDSKA----------ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------ 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~----------~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------ 346 (1293)
+.|+++|++++|+.+. ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|.+..
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 4699999999996321 246999999999999999999999999999999999999999884321
Q ss_pred ---------ecCcEEEEcCCc--ccc-CccHHHHHccCC-----CCCH----HHHHHHHHHcCChhHHhcCCCCCccccc
Q 000774 347 ---------IRGTVAYVPQVS--WIF-NATVRDNILFGS-----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIG 405 (1293)
Q Consensus 347 ---------~~~~i~~v~Q~~--~l~-~~Tv~eni~~g~-----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig 405 (1293)
.++.|+||+|+| .++ ..||.|||.++. ..+. +++.+.++..++... ...
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~----------~~~ 156 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN----------LIN 156 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH----------Hhc
Confidence 245799999998 465 689999996531 1232 233445666665321 123
Q ss_pred CCCCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEe
Q 000774 406 ERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVH 483 (1293)
Q Consensus 406 ~~g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~ 483 (1293)
....+|||||||||+|||||+.+|++||+||||++||+.+...+.+.+.+... .|.|+|+||||++.+.. ||+|++|+
T Consensus 157 ~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~ 236 (331)
T PRK15079 157 RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMY 236 (331)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 34568999999999999999999999999999999999999999986655443 38999999999999975 89999999
Q ss_pred CCeEEEecChHHHhhc
Q 000774 484 EGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 484 ~G~i~~~g~~~~l~~~ 499 (1293)
+|+|++.|+.+++.++
T Consensus 237 ~G~ive~g~~~~i~~~ 252 (331)
T PRK15079 237 LGHAVELGTYDEVYHN 252 (331)
T ss_pred CCEEEEEcCHHHHHcC
Confidence 9999999999998865
No 476
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-36 Score=339.69 Aligned_cols=207 Identities=19% Similarity=0.297 Sum_probs=167.0
Q ss_pred CCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCCcee----------
Q 000774 282 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAV---------- 346 (1293)
Q Consensus 282 ~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~-----~~~g~~~~---------- 346 (1293)
.+.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|....
T Consensus 19 ~~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 95 (268)
T PRK14248 19 EHILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNI 95 (268)
T ss_pred CceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccc
Confidence 34699999999996 3579999999999999999999999999999999999864 67774211
Q ss_pred ----ecCcEEEEcCCccccCccHHHHHccCCCC----C----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChH
Q 000774 347 ----IRGTVAYVPQVSWIFNATVRDNILFGSAF----E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 414 (1293)
Q Consensus 347 ----~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~----~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 414 (1293)
.+..++|++|++.+|..|++||+.++... . ++...++++..++...+. ...+....+||||
T Consensus 96 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 168 (268)
T PRK14248 96 NVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGG 168 (268)
T ss_pred cHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHH
Confidence 23469999999999988999999865211 1 122334444554432111 1234566799999
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecCh
Q 000774 415 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 493 (1293)
Q Consensus 415 qkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 493 (1293)
||||++|||||+.+|++|||||||++||+.+.+++.+.+.+. .+++|+|++||+++++. .||+|++|++|++++.|++
T Consensus 169 q~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 247 (268)
T PRK14248 169 QQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITEL-KEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQT 247 (268)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHH-hcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999998765543 45689999999999876 5899999999999999999
Q ss_pred HHHhhc
Q 000774 494 EDLSNN 499 (1293)
Q Consensus 494 ~~l~~~ 499 (1293)
+++..+
T Consensus 248 ~~~~~~ 253 (268)
T PRK14248 248 EQIFTS 253 (268)
T ss_pred HHHHhC
Confidence 887654
No 477
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.3e-37 Score=312.75 Aligned_cols=203 Identities=24% Similarity=0.406 Sum_probs=166.8
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.+..+|+.++|. ++++++|+||++++||++++.||||+||||.+.++.|+.+|++|.... -|-.
T Consensus 4 ~L~a~~l~K~y~---kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 4 TLVAENLAKSYK---KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred EEEehhhhHhhC---CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 578899999996 578999999999999999999999999999999999999999994321 1235
Q ss_pred EEEEcCCcccc-CccHHHHHccCCCC---CHH------HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHH
Q 000774 351 VAYVPQVSWIF-NATVRDNILFGSAF---EPA------RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 420 (1293)
Q Consensus 351 i~~v~Q~~~l~-~~Tv~eni~~g~~~---~~~------~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRia 420 (1293)
|||+||++.+| ..||+|||..--+. +.+ +.++.++..++.+.. ...+.+||||||+|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr-----------~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLR-----------DSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHh-----------cCcccccccchHHHHH
Confidence 99999999999 67999999754221 111 122334444433332 3456799999999999
Q ss_pred HHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCc-chhhhCCeEEEEeCCeEEEecChHHHhhc
Q 000774 421 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL-HFLSQVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 421 lAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~-~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|||||..+|++++||||++++||.+...|-+.+.....+|-.|+++-|.. ++++-|||.|++.+|++..+|+++++.++
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 99999999999999999999999999999654444455688899999985 56889999999999999999999999877
Q ss_pred c
Q 000774 500 G 500 (1293)
Q Consensus 500 ~ 500 (1293)
+
T Consensus 230 ~ 230 (243)
T COG1137 230 E 230 (243)
T ss_pred h
Confidence 4
No 478
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.8e-36 Score=330.57 Aligned_cols=199 Identities=25% Similarity=0.369 Sum_probs=163.1
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCc
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 350 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~ 350 (1293)
+.|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..
T Consensus 6 ~~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 6 PLLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred ceEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 3699999999996 357999999999999999999999999999999999999999984321 1346
Q ss_pred EEEEcCCccccCccHHHHHccCCC-----CCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 351 VAYVPQVSWIFNATVRDNILFGSA-----FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 351 i~~v~Q~~~l~~~Tv~eni~~g~~-----~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
++|++|++.+|+.|++||+.++.. .+.++..+.++..++.+ +.......+||||||||++|||||
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHH
Confidence 999999999998899999986421 11233445555555532 123445679999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhhCCeEEEEe-CCeEEEecChH
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVH-EGMVKEEGTFE 494 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~~d~i~~l~-~G~i~~~g~~~ 494 (1293)
+.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||++++++.||++++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999876655433 4889999999999998899999995 67777788775
No 479
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-36 Score=328.43 Aligned_cols=191 Identities=21% Similarity=0.377 Sum_probs=158.4
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVAY 353 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~~ 353 (1293)
|+++|++|.|+. +++|+|+||++++| +++|+||||||||||+++|+|+++|++|.... .++.++|
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 478999999963 57999999999999 99999999999999999999999999984321 1346999
Q ss_pred EcCCccccC-ccHHHHHccCC---CCC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHh
Q 000774 354 VPQVSWIFN-ATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 425 (1293)
Q Consensus 354 v~Q~~~l~~-~Tv~eni~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral 425 (1293)
++|++.+|. .||+||+.+.. ..+ .+++.++++..++.+..+. ...+||||||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKK-----------KIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhC-----------chhhCCHHHHHHHHHHHHH
Confidence 999999885 59999997631 111 2345566677776554332 3358999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEec
Q 000774 426 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 491 (1293)
Q Consensus 426 ~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g 491 (1293)
+.+|+++||||||++||+.+.+++.+.+.+. .+++|+|+|||+++++.. +||+++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSEL-GEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHH-hCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999998866544 346999999999999864 8999999999998764
No 480
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-36 Score=327.21 Aligned_cols=191 Identities=26% Similarity=0.458 Sum_probs=158.6
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAYV 354 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~v 354 (1293)
|+++|++++|++ +. .|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 478999999963 22 3999999999999999999999999999999999999984321 12359999
Q ss_pred cCCccccC-ccHHHHHccCCC--C-----CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhh
Q 000774 355 PQVSWIFN-ATVRDNILFGSA--F-----EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 426 (1293)
Q Consensus 355 ~Q~~~l~~-~Tv~eni~~g~~--~-----~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~ 426 (1293)
+|++.+|. .|++||+.++.. . +++++.++++..++.+..+..+ .+||||||||++|||||+
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al~ 144 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVLV 144 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHHh
Confidence 99999885 599999987532 1 1234566777777765555443 489999999999999999
Q ss_pred cCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEec
Q 000774 427 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 491 (1293)
Q Consensus 427 ~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g 491 (1293)
.+|+++||||||++||+.+.+.+.+.+.+... .++|+|++||+++++.. ||++++|++|++++.|
T Consensus 145 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 145 RDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999886655433 48999999999999865 8999999999998754
No 481
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.7e-36 Score=333.85 Aligned_cols=200 Identities=21% Similarity=0.357 Sum_probs=164.9
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.|+++|+++.|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.... .+..
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 4889999999962 57999999999999999999999999999999999999999984221 1235
Q ss_pred EEEEcCCccccC-ccHHHHHccCCCC---------------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChH
Q 000774 351 VAYVPQVSWIFN-ATVRDNILFGSAF---------------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 414 (1293)
Q Consensus 351 i~~v~Q~~~l~~-~Tv~eni~~g~~~---------------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 414 (1293)
++|++|++.+|. .||+||+.++... ..+++.+.++..++.+ .......+||||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G 147 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLAD-----------EADRLAGLLSHG 147 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHH
Confidence 999999999886 5999999875321 0122333444444332 234455789999
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecCh
Q 000774 415 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 493 (1293)
Q Consensus 415 qkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 493 (1293)
||||++|||||+.+|+++||||||++||+.+.+.+++.+... .+++|+|++||+++++.. ||+|++|++|++++.|++
T Consensus 148 e~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~ 226 (242)
T TIGR03411 148 QKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSL-AGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSL 226 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCH
Confidence 999999999999999999999999999999999998865543 447899999999999875 899999999999999999
Q ss_pred HHHhh
Q 000774 494 EDLSN 498 (1293)
Q Consensus 494 ~~l~~ 498 (1293)
+++..
T Consensus 227 ~~~~~ 231 (242)
T TIGR03411 227 DQVQA 231 (242)
T ss_pred HHHhc
Confidence 88764
No 482
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.3e-36 Score=333.26 Aligned_cols=199 Identities=27% Similarity=0.477 Sum_probs=162.3
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCcE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 351 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~i 351 (1293)
|+++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.... .+..+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 47899999996 357999999999999999999999999999999999999999984321 12359
Q ss_pred EEEcCCccccC-ccHHHHHccCCC-C--C-HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhh
Q 000774 352 AYVPQVSWIFN-ATVRDNILFGSA-F--E-PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 426 (1293)
Q Consensus 352 ~~v~Q~~~l~~-~Tv~eni~~g~~-~--~-~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~ 426 (1293)
+|++|++.+|. .|+.||+.++.. . . .+...++++..+. ..........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999885 599999987532 1 1 1122333333221 111234456789999999999999999
Q ss_pred cCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHH
Q 000774 427 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 496 (1293)
Q Consensus 427 ~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 496 (1293)
.+|+++||||||++||+.+.+++.+.+.+... .++|+|++||+++++.. ||+|+++++|++++.|+++++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999886665444 37999999999999885 899999999999999999887
No 483
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.1e-36 Score=336.52 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=166.5
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------------
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------------ 346 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------------ 346 (1293)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|....
T Consensus 1 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFG---ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeC---CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 47899999996 357999999999999999999999999999999999999999884211
Q ss_pred -------ecCcEEEEcCCcccc-CccHHHHHccCC----CCCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCC
Q 000774 347 -------IRGTVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVN 410 (1293)
Q Consensus 347 -------~~~~i~~v~Q~~~l~-~~Tv~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~ 410 (1293)
.+..++|++|++.++ ..|+.||+.++. .... +++.+.++..++.+..+ ....+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKAD-----------HMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhh-----------cChhh
Confidence 134699999999887 589999998742 1111 23445555555544333 34468
Q ss_pred CChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhh-hCCeEEEEeCCeEE
Q 000774 411 ISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVK 488 (1293)
Q Consensus 411 LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~ 488 (1293)
||||||||++|||||+.+|+++||||||++||+.+.+++.+.+.+...+ |+|+|+|||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999998866554443 899999999999985 58999999999999
Q ss_pred EecChHHHhhc
Q 000774 489 EEGTFEDLSNN 499 (1293)
Q Consensus 489 ~~g~~~~l~~~ 499 (1293)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999888654
No 484
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-36 Score=337.89 Aligned_cols=206 Identities=25% Similarity=0.382 Sum_probs=168.2
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCC-----CCCCcee-----------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-----VSDASAV----------- 346 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~-----~~g~~~~----------- 346 (1293)
+.|+++|+++.|+ ++++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|....
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 4699999999996 35799999999999999999999999999999999999975 6773211
Q ss_pred ---ecCcEEEEcCCccccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 347 ---IRGTVAYVPQVSWIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 347 ---~~~~i~~v~Q~~~l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
.+..++|++|++.+|..|++||+.++.. .+. ++..++++.+++...+. ........+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCHHHH
Confidence 2346999999999888999999987521 222 22344555555532211 123455679999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||++|||||+.+|+++||||||++||+.+.+++.+.+... .+++|+|+|||+++++.. ||+|++|++|++++.|++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l-~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNL-KKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHH-hhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999998765544 457999999999999864 89999999999999999998
Q ss_pred Hhhc
Q 000774 496 LSNN 499 (1293)
Q Consensus 496 l~~~ 499 (1293)
+..+
T Consensus 240 ~~~~ 243 (258)
T PRK14268 240 IFHN 243 (258)
T ss_pred HhcC
Confidence 8654
No 485
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.7e-36 Score=330.09 Aligned_cols=190 Identities=26% Similarity=0.420 Sum_probs=157.5
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee---------------ecC
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 349 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~---------------~~~ 349 (1293)
++++|++++|+. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 468999999963 257999999999999999999999999999999999999999884311 124
Q ss_pred cEEEEcCCccccC-ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHH
Q 000774 350 TVAYVPQVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 421 (1293)
Q Consensus 350 ~i~~v~Q~~~l~~-~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRial 421 (1293)
.++|++|++.+|. .|++||+.++.. .+ .+++.++++..++.+..+.. ..+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRAL-----------PAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHH
Confidence 5999999998875 699999987521 11 12445566666665544433 35899999999999
Q ss_pred HHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeE
Q 000774 422 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 487 (1293)
Q Consensus 422 Aral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i 487 (1293)
||||+.+|+++||||||++||+.+.+++.+.+.+...+|+|+|+|||+++.+.. ||++++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999988766544568999999999999875 899999999974
No 486
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=334.50 Aligned_cols=201 Identities=29% Similarity=0.432 Sum_probs=167.7
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 351 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i 351 (1293)
.|+++|+++.|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.... .+..+
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 478999999996 357999999999999999999999999999999999999999984321 12459
Q ss_pred EEEcCCccc-cCccHHHHHccCCC-C------CHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHH
Q 000774 352 AYVPQVSWI-FNATVRDNILFGSA-F------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 423 (1293)
Q Consensus 352 ~~v~Q~~~l-~~~Tv~eni~~g~~-~------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAr 423 (1293)
+|++|++.+ +..||+||+.++.. . ..++..++++..++.+..+ ....+||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-----------RDYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHH
Confidence 999999987 67899999987532 1 1223455666666654333 234689999999999999
Q ss_pred Hhh------cCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHH
Q 000774 424 AVY------SNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 424 al~------~~~~illLDEpts~LD~~~~~~i~~~l~~~~-~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||+ .+|+++||||||++||+.+.+.+.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAE 227 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHH
Confidence 999 5999999999999999999999988665544 45899999999999987 589999999999999999988
Q ss_pred Hhh
Q 000774 496 LSN 498 (1293)
Q Consensus 496 l~~ 498 (1293)
+.+
T Consensus 228 ~~~ 230 (258)
T PRK13548 228 VLT 230 (258)
T ss_pred HhC
Confidence 765
No 487
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=335.53 Aligned_cols=202 Identities=21% Similarity=0.361 Sum_probs=165.2
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-------------ecCc
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 350 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-------------~~~~ 350 (1293)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 589999999996 357999999999999999999999999999999999999999984221 1234
Q ss_pred EEEEcCCccccC-ccHHHHHccCCCC----------------C---H---HHHHHHHHHcCChhHHhcCCCCCcccccCC
Q 000774 351 VAYVPQVSWIFN-ATVRDNILFGSAF----------------E---P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGER 407 (1293)
Q Consensus 351 i~~v~Q~~~l~~-~Tv~eni~~g~~~----------------~---~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~ 407 (1293)
++|++|++.++. .|++||+.++... . . +++.+.++..++. ...+..
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~ 150 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-----------EHANRQ 150 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-----------hhhhCC
Confidence 899999999885 6999999875210 0 0 1122223333332 234456
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEecCcchhhh-CCeEEEEeCC
Q 000774 408 GVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEG 485 (1293)
Q Consensus 408 g~~LSGGqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~-~~tvi~vtH~~~~l~~-~d~i~~l~~G 485 (1293)
..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+.. ||++++|++|
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999999998866654444 7899999999999865 8999999999
Q ss_pred eEEEecChHHHhhc
Q 000774 486 MVKEEGTFEDLSNN 499 (1293)
Q Consensus 486 ~i~~~g~~~~l~~~ 499 (1293)
++++.|+++++.+.
T Consensus 231 ~i~~~~~~~~~~~~ 244 (255)
T PRK11300 231 TPLANGTPEEIRNN 244 (255)
T ss_pred eEEecCCHHHHhhC
Confidence 99999999887643
No 488
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.1e-36 Score=349.42 Aligned_cols=189 Identities=30% Similarity=0.424 Sum_probs=160.2
Q ss_pred CCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCceee--------------------cCcEEEEcCCcc
Q 000774 300 RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------------RGTVAYVPQVSW 359 (1293)
Q Consensus 300 ~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~~--------------------~~~i~~v~Q~~~ 359 (1293)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|....- +..|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 568999999999999999999999999999999999999998843110 136999999999
Q ss_pred ccC-ccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCE
Q 000774 360 IFN-ATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 431 (1293)
Q Consensus 360 l~~-~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~i 431 (1293)
+|. .||+||+.++.. .+. ++..++++..++.+..+..+ .+||||||||++|||||+.+|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 985 899999998632 121 34456677777765544433 58999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHHHhhc
Q 000774 432 FIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 432 llLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|||||||++||+.+++.+.+.+.+... .++|+|+|||+++++. .+|||++|++|++++.|+++++..+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999999987766544 3899999999999975 5899999999999999999999765
No 489
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-36 Score=337.46 Aligned_cols=206 Identities=26% Similarity=0.390 Sum_probs=167.2
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC--C---CCCCce------------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP--P---VSDASA------------ 345 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~--~---~~g~~~------------ 345 (1293)
+.|+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|...
T Consensus 11 ~~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~ 87 (259)
T PRK14274 11 EVYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVD 87 (259)
T ss_pred ceEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccC
Confidence 4699999999996 3579999999999999999999999999999999999987 3 466321
Q ss_pred --eecCcEEEEcCCccccCccHHHHHccCCC----CCHH----HHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHH
Q 000774 346 --VIRGTVAYVPQVSWIFNATVRDNILFGSA----FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 346 --~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~----~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
..++.|+|++|++.+|..|++||+.++.. .+.+ +..++++..++.+.+. +.+...+.+|||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq 160 (259)
T PRK14274 88 LVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQ 160 (259)
T ss_pred HHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHH
Confidence 11346999999999988899999987532 1111 2334455555543321 12345667999999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||++|||||+.+|+++||||||++||+.+...+.+.+.. ..+++|+|+|||+++.+. .||++++|++|++++.|+++
T Consensus 161 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 239 (259)
T PRK14274 161 QQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTN 239 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999999876554 345789999999999986 48999999999999999999
Q ss_pred HHhhc
Q 000774 495 DLSNN 499 (1293)
Q Consensus 495 ~l~~~ 499 (1293)
++..+
T Consensus 240 ~~~~~ 244 (259)
T PRK14274 240 KMFSN 244 (259)
T ss_pred HHhhC
Confidence 88654
No 490
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.1e-36 Score=324.67 Aligned_cols=193 Identities=25% Similarity=0.321 Sum_probs=162.3
Q ss_pred EEEEEEEEEecCCCCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCCCcceEEECCeecCCCChHHHhhhceE
Q 000774 909 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 988 (1293)
Q Consensus 909 i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 988 (1293)
++++|+++.|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .. .|+.++|
T Consensus 3 l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~-~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGGR--VLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--PD-VAEACHY 77 (207)
T ss_pred EEEEeEEEEECCe--EEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--hh-hHhhcEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999998752 22 7888999
Q ss_pred Eccccccc-cccHhhhcCCCC---CCCHHHHHHHHHHhhHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000774 989 IPQSPVLF-SGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1064 (1293)
Q Consensus 989 v~Q~~~lf-~~ti~~nl~~~~---~~~~~~~~~~l~~~~l~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p 1064 (1293)
++|++.++ ..|+++|+.+.. ...++++.++++..++.+ .......+||||||||++||||++++|
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~al~~~p 146 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAP-----------LAHLPFGYLSAGQKRRVALARLLVSNR 146 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHH-----------HHcCChhhcCHHHHHHHHHHHHHhcCC
Confidence 99988776 469999986422 122334555555555433 233344679999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEEecCcchhhccCEEEEEeC
Q 000774 1065 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDS 1118 (1293)
Q Consensus 1065 ~iLlLDEpTs~lD~~t~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~ 1118 (1293)
++|||||||++||+.+.+.+++.|++.. +++|+|++||+++++.. |+++-++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 147 PIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 9999999999999999999999998854 47899999999999987 99987744
No 491
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.2e-36 Score=328.80 Aligned_cols=189 Identities=33% Similarity=0.548 Sum_probs=154.8
Q ss_pred EEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee------------ecCcEEE
Q 000774 286 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVAY 353 (1293)
Q Consensus 286 ~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~------------~~~~i~~ 353 (1293)
+++|++++|++ .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..|+|
T Consensus 1 ~~~~l~~~~~~-~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPD-GARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCC-CCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 36899999963 1257999999999999999999999999999999999999999984321 1246999
Q ss_pred EcCCcc--ccCccHHHHHccCCC---CCH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 354 VPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 354 v~Q~~~--l~~~Tv~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
++|++. +++.|++||+.++.. .+. ++..+.++..++.+..+ .....||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRD-----------RSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHHHHHH
Confidence 999984 568899999987521 121 23444566666554433 3346899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCe
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 486 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~ 486 (1293)
|+.+|+++||||||++||+.+.+++.+.+.+...+|+|+|++||+++++.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999998766554458999999999999986 89999999884
No 492
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=327.82 Aligned_cols=200 Identities=25% Similarity=0.426 Sum_probs=167.7
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee----------ecCcEEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAYV 354 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~----------~~~~i~~v 354 (1293)
++++|++++|+. .+ .|+||+|++||+++|+||||||||||+++|+|+++|++|.... .+..++|+
T Consensus 2 l~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 76 (232)
T PRK10771 2 LKLTDITWLYHH---LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSML 76 (232)
T ss_pred eEEEEEEEEECC---cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEE
Confidence 789999999962 22 3999999999999999999999999999999999999984321 12359999
Q ss_pred cCCccccC-ccHHHHHccCCC--C--C---HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhh
Q 000774 355 PQVSWIFN-ATVRDNILFGSA--F--E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 426 (1293)
Q Consensus 355 ~Q~~~l~~-~Tv~eni~~g~~--~--~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~ 426 (1293)
+|++.++. .|+.||+.++.. . . .+++.++++..++.+.++..+ ..||||||||++||||++
T Consensus 77 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~ 145 (232)
T PRK10771 77 FQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCLV 145 (232)
T ss_pred ecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHHh
Confidence 99998885 599999987521 1 1 234566777777776655544 489999999999999999
Q ss_pred cCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhcc
Q 000774 427 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNG 500 (1293)
Q Consensus 427 ~~~~illLDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 500 (1293)
.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++.+.. ||++++|++|++++.|+++++....
T Consensus 146 ~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 146 REQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 99999999999999999999999886655443 38899999999999875 8999999999999999999887654
No 493
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=336.88 Aligned_cols=207 Identities=23% Similarity=0.343 Sum_probs=167.8
Q ss_pred CCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCCcee----------
Q 000774 282 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAV---------- 346 (1293)
Q Consensus 282 ~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~-----~~~g~~~~---------- 346 (1293)
...|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|....
T Consensus 11 ~~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 11 NIIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 34699999999996 3579999999999999999999999999999999999987 57773211
Q ss_pred ----ecCcEEEEcCCccccCccHHHHHccCCCC---C---HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 347 ----IRGTVAYVPQVSWIFNATVRDNILFGSAF---E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 347 ----~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~---~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
.+..|+|++|++.+|..||+||+.++... . +++..++++.+++...+. ........+||||||
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 160 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQQ 160 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHHH
Confidence 12469999999999878999999876421 1 123444555555432221 223455678999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeC-----------
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHE----------- 484 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~----------- 484 (1293)
||++|||||+.+|++|||||||++||+.+.+++.+.+.+. .+++|+|++||+++++. .||++++|++
T Consensus 161 qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~-~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 161 QRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHEL-KKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 9999999999999999999999999999999998865443 45789999999999886 5899999996
Q ss_pred CeEEEecChHHHhhc
Q 000774 485 GMVKEEGTFEDLSNN 499 (1293)
Q Consensus 485 G~i~~~g~~~~l~~~ 499 (1293)
|++++.|+.+++.+.
T Consensus 240 g~~~~~~~~~~~~~~ 254 (269)
T PRK14259 240 GYLVEFNETKKIFNS 254 (269)
T ss_pred ceEEEeCCHHHHHhC
Confidence 678999999988654
No 494
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=7.4e-36 Score=370.64 Aligned_cols=220 Identities=25% Similarity=0.420 Sum_probs=177.6
Q ss_pred cEEEEEEEEEecCC--CCCceeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhcCCCC-----CcceEEECCeecCCCChH
Q 000774 908 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFGLM 980 (1293)
Q Consensus 908 ~i~~~~v~~~y~~~--~~~~l~~vsl~i~~Ge~v~ivG~~GsGKSTll~~l~g~~~p-----~~G~I~i~g~~i~~~~~~ 980 (1293)
.++++|++++|++. ..++|+|+||+|.+||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 38999999999631 23699999999999999999999999999999999999997 799999999999776654
Q ss_pred H---Hh-hhceEEccccc--ccc-ccHhhhcCCC----CCCCHHHHHHHHHHhhHHHHHHHccCCcch---hhhcCCCCC
Q 000774 981 D---LR-KILGIIPQSPV--LFS-GTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDA---QVSEAGENF 1046 (1293)
Q Consensus 981 ~---~r-~~i~~v~Q~~~--lf~-~ti~~nl~~~----~~~~~~~~~~~l~~~~l~~~i~~lp~gl~~---~~~~~~~~L 1046 (1293)
. .| ++|||+||++. ++. .|+++|+... ......+.. ..+.+.++.+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 3 33 57999999985 444 4888887421 111111111 1122333332 3322 245567889
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEEecCcchhhc-cCEEEEEeCCeEee
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1123 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iLlLDEpTs~lD~~t~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 1123 (1293)
|||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||+||||++.+.. ||||++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999864 37899999999999876 99999999999999
Q ss_pred ecChhhhhhcC
Q 000774 1124 YDTPEELLSNE 1134 (1293)
Q Consensus 1124 ~g~~~el~~~~ 1134 (1293)
.|+++++....
T Consensus 238 ~g~~~~~~~~~ 248 (529)
T PRK15134 238 QNRAATLFSAP 248 (529)
T ss_pred eCCHHHHhhCC
Confidence 99999987543
No 495
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=335.31 Aligned_cols=205 Identities=27% Similarity=0.380 Sum_probs=167.6
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCCce-------------
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASA------------- 345 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~-----~g~~~------------- 345 (1293)
.|+++|++|+|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|...
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 589999999996 357999999999999999999999999999999999999987 36321
Q ss_pred -eecCcEEEEcCCccccCccHHHHHccCCCC---C-H----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 346 -VIRGTVAYVPQVSWIFNATVRDNILFGSAF---E-P----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 346 -~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~~---~-~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
..++.++|++|++.+|..|++||+.++... . . +.+.++++..++.+.+. +..+..+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 124569999999999888999999876321 1 1 22333344444433222 224566789999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||++|||||+.+|+++||||||++||+.+.+++.+.+... .+++|+|+|||+++.+.. ||++++|++|++++.|++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQEL-KQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 9999999999999999999999999999999998755443 468999999999999876 79999999999999999988
Q ss_pred Hhhc
Q 000774 496 LSNN 499 (1293)
Q Consensus 496 l~~~ 499 (1293)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 7654
No 496
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=336.93 Aligned_cols=207 Identities=25% Similarity=0.392 Sum_probs=169.6
Q ss_pred CCcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCC-----CCCCcee----------
Q 000774 282 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-----VSDASAV---------- 346 (1293)
Q Consensus 282 ~~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~-----~~g~~~~---------- 346 (1293)
.+.|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|....
T Consensus 17 ~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 34799999999996 35799999999999999999999999999999999999975 7773211
Q ss_pred ----ecCcEEEEcCCccccCccHHHHHccCCC---C--C----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCCh
Q 000774 347 ----IRGTVAYVPQVSWIFNATVRDNILFGSA---F--E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 413 (1293)
Q Consensus 347 ----~~~~i~~v~Q~~~l~~~Tv~eni~~g~~---~--~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 413 (1293)
.+..++|++|++.+|..||.||+.++.. . . .+++.++++..++.+.+. +..+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 2346999999999988899999987521 1 1 123455666666644322 123455679999
Q ss_pred HHHHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecC
Q 000774 414 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGT 492 (1293)
Q Consensus 414 GqkqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~ 492 (1293)
|||||++|||||+.+|++|||||||++||+.+.+++.+.+... .+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l-~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDEL-RQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHH-hcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999998765443 457899999999999864 79999999999999999
Q ss_pred hHHHhhc
Q 000774 493 FEDLSNN 499 (1293)
Q Consensus 493 ~~~l~~~ 499 (1293)
++++...
T Consensus 246 ~~~~~~~ 252 (267)
T PRK14235 246 TEKMFTN 252 (267)
T ss_pred HHHHHhC
Confidence 9887643
No 497
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-36 Score=335.69 Aligned_cols=205 Identities=21% Similarity=0.368 Sum_probs=165.9
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCC--CC---CCCCce-------------
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL--PP---VSDASA------------- 345 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~--~~---~~g~~~------------- 345 (1293)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+. +| ++|...
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 589999999996 357999999999999999999999999999999999985 36 366321
Q ss_pred -eecCcEEEEcCCccccCccHHHHHccCC---CC-CH----HHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHH
Q 000774 346 -VIRGTVAYVPQVSWIFNATVRDNILFGS---AF-EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 416 (1293)
Q Consensus 346 -~~~~~i~~v~Q~~~l~~~Tv~eni~~g~---~~-~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqk 416 (1293)
..+..++|++|++.+|+.|++||+.++. .. .. +++.++++.+++...+. +..+....+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 1234699999999999899999998652 11 11 22333455555433221 123456679999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChHH
Q 000774 417 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 495 (1293)
Q Consensus 417 qRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 495 (1293)
||++|||||+.+|++|||||||++||+.+.+++.+.+... .+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGL-KDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHH-hhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999998765443 45689999999999876 589999999999999999998
Q ss_pred Hhhc
Q 000774 496 LSNN 499 (1293)
Q Consensus 496 l~~~ 499 (1293)
+.+.
T Consensus 234 ~~~~ 237 (252)
T PRK14239 234 MFMN 237 (252)
T ss_pred HHhC
Confidence 8654
No 498
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-36 Score=335.22 Aligned_cols=206 Identities=24% Similarity=0.351 Sum_probs=167.7
Q ss_pred CcEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcC---CCC--CCCCce------------
Q 000774 283 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGE---LPP--VSDASA------------ 345 (1293)
Q Consensus 283 ~~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~---~~~--~~g~~~------------ 345 (1293)
+.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+ ++| ++|...
T Consensus 2 ~~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14245 2 VKIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQ 78 (250)
T ss_pred cEEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccccc
Confidence 3689999999996 35799999999999999999999999999999999997 454 366321
Q ss_pred --eecCcEEEEcCCccccCccHHHHHccCCC---C-C----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHH
Q 000774 346 --VIRGTVAYVPQVSWIFNATVRDNILFGSA---F-E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 415 (1293)
Q Consensus 346 --~~~~~i~~v~Q~~~l~~~Tv~eni~~g~~---~-~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGq 415 (1293)
..++.|+|+||++.+|..|+.||+.++.. . . +++..++++.+++.+.+. +..+..+.+|||||
T Consensus 79 ~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14245 79 VDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQ 151 (250)
T ss_pred HHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHH
Confidence 11346999999999988899999987521 1 1 123445566666543332 12345667999999
Q ss_pred HHHHHHHHHhhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhh-hCCeEEEEeCCeEEEecChH
Q 000774 416 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 494 (1293)
Q Consensus 416 kqRialAral~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 494 (1293)
|||++|||||+.+|+++||||||++||+.+.+++.+.+.+. .+++|+|+|||+++.+. .||++++|++|++++.|+++
T Consensus 152 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~ 230 (250)
T PRK14245 152 QQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHEL-KKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTK 230 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999998866554 46799999999999985 58999999999999999999
Q ss_pred HHhhc
Q 000774 495 DLSNN 499 (1293)
Q Consensus 495 ~l~~~ 499 (1293)
++.++
T Consensus 231 ~~~~~ 235 (250)
T PRK14245 231 KIFTN 235 (250)
T ss_pred HHhcC
Confidence 98654
No 499
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.5e-36 Score=344.48 Aligned_cols=201 Identities=23% Similarity=0.414 Sum_probs=168.1
Q ss_pred cEEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEE
Q 000774 284 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVA 352 (1293)
Q Consensus 284 ~i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~ 352 (1293)
.++++|++++|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|.... .++.+|
T Consensus 2 ~l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig 78 (301)
T TIGR03522 2 SIRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceE
Confidence 378999999996 357999999999999999999999999999999999999999984321 234699
Q ss_pred EEcCCccccC-ccHHHHHccCCC---CC----HHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHH
Q 000774 353 YVPQVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 424 (1293)
Q Consensus 353 ~v~Q~~~l~~-~Tv~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAra 424 (1293)
|+||++.++. .|+.||+.+... .. .++..++++..++.+.. ......||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQ-----------HKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHh-----------cCchhhCCHHHHHHHHHHHH
Confidence 9999999874 599999975321 12 23445556666655443 23456899999999999999
Q ss_pred hhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhh-CCeEEEEeCCeEEEecChHHHhhc
Q 000774 425 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 499 (1293)
Q Consensus 425 l~~~~~illLDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 499 (1293)
|+++|+++||||||++||+.+.+++++.+... .+++|+|++||+++.+.. ||||++|++|+++..|+.+++...
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~-~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNI-GKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999866544 457999999999998875 899999999999999999988653
No 500
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.1e-35 Score=316.34 Aligned_cols=167 Identities=28% Similarity=0.582 Sum_probs=148.6
Q ss_pred EEEEeeEEEcCCCCCCCceeceeEEecCCcEEEEEcCCCCcHHHHHHHHhcCCCCCCCCcee-----------ecCcEEE
Q 000774 285 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVAY 353 (1293)
Q Consensus 285 i~~~~~~~~y~~~~~~~~l~~isl~i~~G~~~~lvG~~GsGKSTLl~~l~g~~~~~~g~~~~-----------~~~~i~~ 353 (1293)
|+++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.... .+..++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4789999999642 247999999999999999999999999999999999999999984321 1345999
Q ss_pred EcCCccccCccHHHHHccCCCCCHHHHHHHHHHcCChhHHhcCCCCCcccccCCCCCCChHHHHHHHHHHHhhcCCCEEE
Q 000774 354 VPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFI 433 (1293)
Q Consensus 354 v~Q~~~l~~~Tv~eni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGqkqRialAral~~~~~ill 433 (1293)
++|++++|+.|++||+ ..+||||||||++||||++.+|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999989999997 35899999999999999999999999
Q ss_pred EeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEecCcchhhhCCeEEEEeCCeEEEec
Q 000774 434 FDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEG 491 (1293)
Q Consensus 434 LDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~vtH~~~~l~~~d~i~~l~~G~i~~~g 491 (1293)
|||||++||+.+.+.+++.+.+. .+++|+|++||++++++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEV-LKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999998866544 4589999999999999889999999999998754
Done!