Query 000774
Match_columns 1293
No_of_seqs 449 out of 4130
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 16:55:00 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000774.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_544-548//hhsearch_pdb/000774hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1406.1 116.9 1108 28-1144 153-1315(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1224.9 103.6 1117 17-1146 114-1271(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 688.1 63.3 513 626-1146 138-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 647.2 49.7 512 626-1145 110-625 (1284)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 631.9 60.6 551 585-1144 22-577 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 631.8 57.1 549 585-1144 36-589 (598)
7 4a82_A Cystic fibrosis transme 1.0 1 1 623.3 58.4 559 574-1143 4-574 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 616.9 69.1 559 573-1144 14-578 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 616.5 70.1 559 573-1144 14-578 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 615.4 65.1 560 575-1144 10-582 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1406.07 Aligned_cols=1108 Identities=19% Similarity=0.231 Sum_probs=865.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999995289654317893589999999899999999-999999989999999999999
Q 000774 28 EAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLY 106 (1293)
Q Consensus 28 ~~~~~~~~~~~~~r~~~~l~~~if~k~l~l~~~~~~~~~~g~i~~~lt~Di~~i~~~~-~~l~~~~~~~l~ii~~~~ll~ 106 (1293)
.....+.....+.|+...+|..+|+|+++++.+++++.++|++++++++|++.+++.+ ..+..++..++.+++++++++
T Consensus 153 ~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~ 232 (1321)
T 4f4c_A 153 GQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAF 232 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999978898998799848999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99869999999999999999999999999999999999999999999999458999984460999999999999999999
Q 000774 107 NELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWF 186 (1293)
Q Consensus 107 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~r~~e~~~~ 186 (1293)
+..|.+++++++++++++++..++.++..+..++..+..+++.+.+.|.++|+++||+|+||+.+.+++.+..++..+..
T Consensus 233 ~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 312 (1321)
T 4f4c_A 233 THSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAG 312 (1321)
T ss_dssp HHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999999999999999999999999999999999839999982142999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999998--999999999987706988978899999999999999999999999999999999999998
Q 000774 187 RKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEF 264 (1293)
Q Consensus 187 ~~~~~l~~~~~~~~~~~~--~~v~~~~~g~~~~~~~~l~~~~~~~~l~l~~~l~~pl~~l~~~~~~~~~~~~s~~Ri~~~ 264 (1293)
.+.....+.......++. ..+.++++|.+.+..|.++++.+++++.++..+..|+..++..+..+.++.++++||.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 392 (1321)
T 4f4c_A 313 VLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEV 392 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999995998699999999999999999998999999999999999999999
Q ss_pred HHHHHCCCCCCC---CCCCCCCCEEEEEEEEECCCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 621110149999---99999992899845897189999994000027743994999993999848999999945989999
Q 000774 265 LLAEEKILLPNP---PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS 341 (1293)
Q Consensus 265 l~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~ 341 (1293)
++.++......+ +..+....|+|+||+|+|++..++++|+|+||++++|++++|||++|||||||+++|+|+++|++
T Consensus 393 l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~ 472 (1321)
T 4f4c_A 393 LDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLK 472 (1321)
T ss_dssp TTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSE
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCC
T ss_conf 71785345666556567788876799985540799998743333188622882789980589857788887545651644
Q ss_pred CCCEEE-------------CCCEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 873254-------------091899907765467248998725999-998899999998097147720999986302679
Q 000774 342 DASAVI-------------RGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGER 407 (1293)
Q Consensus 342 g~~~~~-------------~~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~~~~~~i~~~ 407 (1293)
| .+.+ |+.|+||+|+||+|++||+|||++|++ .++++++++++.|+++++++.+|+|++|.+||+
T Consensus 473 G-~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~ 551 (1321)
T 4f4c_A 473 G-KITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDR 551 (1321)
T ss_dssp E-EEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSS
T ss_pred C-CCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCC
T ss_conf 8-615799650112599985046665875332078616788641552209999999987565468870888886075589
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCEEEEEECCEE
Q ss_conf 98779279999999998603998899807666719999999999987111089689998057430420796999809758
Q 000774 408 GVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMV 487 (1293)
Q Consensus 408 g~~LSGGQkqRi~lAral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i 487 (1293)
|.+|||||||||+||||+|++|+|+|||||||+||+++++.+.+ ++....+++|+|+|||+++++..||+|++|++|++
T Consensus 552 G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~-~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~i 630 (1321)
T 4f4c_A 552 GTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQ-ALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQV 630 (1321)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHH-HHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEE
T ss_conf 88777778799999998725999899845544688789999999-99998479889997363878986898999639965
Q ss_pred EEECCHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCC------CC---CCCCCCCCCCCC----------CCCCC
Q ss_conf 771396788314078999999820012323200158655677------88---887888889898----------76333
Q 000774 488 KEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNK------TS---KPAANGVDNDLP----------KEASD 548 (1293)
Q Consensus 488 ~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~----------~~~~~ 548 (1293)
+++|+|++|.++++.|.+++..+...+.............+. .. ............ .....
T Consensus 631 ve~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1321)
T 4f4c_A 631 VEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPV 710 (1321)
T ss_dssp EEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC---------------------------------------------
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
T ss_conf 13689999998532799999962212222332334433223211122222342222222110221110132124567740
Q ss_pred --CCCCCCCC--CCCHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CC
Q ss_conf --11122353--31002434311753299999999970105999999999999999886466466451367876----88
Q 000774 549 --TRKTKEGK--SVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSL----KT 620 (1293)
Q Consensus 549 --~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~----~~ 620 (1293)
++....+. ....+++..+.+......+..++...+.++.+++.+++.++........+.++..|.+.... ..
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1321)
T 4f4c_A 711 IDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFL 790 (1321)
T ss_dssp -----CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 25777531540389999999970786310999999987789999999999999999999999999999987517934556
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCHHHHHHHH
Q ss_conf 883389999999999999999999999999999999999999999997399421012--461147998711534597788
Q 000774 621 HGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHT--NPLGRIINRFAKDLGDIDRNV 698 (1293)
Q Consensus 621 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~~--~~~G~ilsrlt~Di~~i~~~~ 698 (1293)
....+|..+|..++++..++.++..++....+.+...++|..++++++++|+.||+. +++|++++|+++|+..++..+
T Consensus 791 ~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l 870 (1321)
T 4f4c_A 791 SQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAI 870 (1321)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 67899999999999999999999999999999999999999998887349933321678884888850250599999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
Q ss_conf 99999999999999999999999998999999999999999999999999999999999618299999999856999999
Q 000774 699 AVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRA 778 (1293)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira 778 (1293)
+..+..++..++.++..++++++.+|.+.+++++++++++.....+.+.............++....+.|++.|+++||+
T Consensus 871 ~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra 950 (1321)
T 4f4c_A 871 DFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQA 950 (1321)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999986537777022137868999999998889999999999999999999999988898899999962798886
Q ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4079999999999999999999999998899999999999999999999998--73486542133498999999999999
Q 000774 779 YKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNI 856 (1293)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~ 856 (1293)
|+.++++.+++.+..+...+..........+.......+..+...+..+++. +..+..+.. ...+..++.+....
T Consensus 951 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~---~~~~~~~~~~~~~~ 1027 (1321)
T 4f4c_A 951 LAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQ---PMRVLRVMYAITIS 1027 (1321)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSC---HHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHH
T ss_conf 141488999999999999999999999999999999999999999999875788753765421---47899999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEECC
Q ss_conf 99999999999999999799999852105899896556789999999997539999889993699-99820001389649
Q 000774 857 TSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPP 935 (1293)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vsl~i~~ 935 (1293)
..++..+...+...+....+.+|+.++++.+++.+. ...+.+.|+..|.|+|+||+|+|+++ ..++|+|+||+|+|
T Consensus 1028 ~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~ 1104 (1321)
T 4f4c_A 1028 TSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDS---LSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEP 1104 (1321)
T ss_dssp TSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCT---TCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECC
T ss_conf 889999999999999999999989998607665777---66778788888818999879857999988212451699889
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCC---CCCCH
Q ss_conf 988999969999889999999527778863699999616898968885501687266654565676604779---99998
Q 000774 936 SDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF---SEHSD 1012 (1293)
Q Consensus 936 Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~---~~~~~ 1012 (1293)
||++|||||||||||||+++|+|+++|++|+|.+||+|+++++++++|++|++|||+|++|++|||+||.++ .+.+|
T Consensus 1105 Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd 1184 (1321)
T 4f4c_A 1105 GQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTM 1184 (1321)
T ss_dssp TCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCH
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCH
T ss_conf 89999989999819999999956863899789999998654999999854599878997327239999745499999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 78999999930999998715995136312999999458999999998513998899838888999998999999999882
Q 000774 1013 ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF 1092 (1293)
Q Consensus 1013 ~~i~~~l~~~~~~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~ 1092 (1293)
+++++|++.++++++++.+|.||||.++++|.+||||||||||||||++++|+|||||||||+||++|++.|++.|++.+
T Consensus 1185 ~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~ 1264 (1321)
T 4f4c_A 1185 AQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAR 1264 (1321)
T ss_dssp HHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999829849997176789998238891569999999999999971799899968111578999999999999973
Q ss_pred CCCEEEEEECCCCHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHH
Q ss_conf 8947999705931010148899995985866439246640499827899984
Q 000774 1093 KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1093 ~~~tvi~vsH~~~~~~~~d~v~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 1144 (1293)
++||+|+||||++++..||+|+||++|+|+|+|+|+||+++ ++.|+++++.
T Consensus 1265 ~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~ 1315 (1321)
T 4f4c_A 1265 EGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQK 1315 (1321)
T ss_dssp SSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C---------
T ss_pred CCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHH
T ss_conf 99989996068999996999999989899998888999849-8099999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1224.86 Aligned_cols=1117 Identities=19% Similarity=0.225 Sum_probs=834.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999995289654317893589999999899999999-9999999899
Q 000774 17 IFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAP 95 (1293)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~if~k~l~l~~~~~~~~~~g~i~~~lt~Di~~i~~~~-~~l~~~~~~~ 95 (1293)
+++..+...++.....+...+.+.++...+|..+|+|+++++..++++.++|++++++++|++.+++.+ ..+..++..+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~ 193 (1284)
T 3g5u_A 114 YTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAM 193 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999869989975688778999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999999999998699999999999999999999999999999999999999999999994589999844609999999
Q 000774 96 FRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKV 175 (1293)
Q Consensus 96 l~ii~~~~ll~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~ 175 (1293)
+.++.+++++++..|.++++.++++++++.+..++.++..+..++..+..++..+...|.++|+++||+|++|+.+.+++
T Consensus 194 ~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~ 273 (1284)
T 3g5u_A 194 ATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERY 273 (1284)
T ss_dssp HHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHH
T ss_conf 99999999999998999999999999999999999999999999999999999999999997879999846539999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999998--9999999999877069889788999999999999999999999999999
Q 000774 176 QNVRNDELSWFRKAQFLAACNSFILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVN 253 (1293)
Q Consensus 176 ~~~r~~e~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~~g~~~~~~~~l~~~~~~~~l~l~~~l~~pl~~l~~~~~~~~~ 253 (1293)
.+..++..+...+.....+....+..++. ..+..+++|.+.+..|.++.|.+++++.++.....|+..+...+..+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1284)
T 3g5u_A 274 NNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFAN 353 (1284)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999929988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCC-C-C-CCCCCCCCCEEEEEEEEECCCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHH
Q ss_conf 99999999998621110149-9-9-9999999928998458971899999940000277439949999939998489999
Q 000774 254 ANVSLKRMEEFLLAEEKILL-P-N-PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLI 330 (1293)
Q Consensus 254 ~~~s~~Ri~~~l~~~~~~~~-~-~-~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl 330 (1293)
+..+++|+.++++.++.... . . .+.++....|+++|++|+|+++.+.++|+|+||++++|++++|+|+||||||||+
T Consensus 354 ~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~ 433 (1284)
T 3g5u_A 354 ARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTV 433 (1284)
T ss_dssp HHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHH
T ss_conf 99999999999728986776665677777777718999989976999987101254589759988999899999799999
Q ss_pred HHHHCCCCCCCCCCEEEC-------------CCEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHCCCHHHHHCC
Q ss_conf 999459899998732540-------------91899907765467248998725999-9988999999980971477209
Q 000774 331 SAMLGELPPVSDASAVIR-------------GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLL 396 (1293)
Q Consensus 331 ~~l~g~~~~~~g~~~~~~-------------~~i~~v~Q~~~l~~~Tv~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~l 396 (1293)
++|+|+++|++| .+.+. ..|+||+|+|++|++||+|||.+|.+ .++++++++++.+++.+++..+
T Consensus 434 ~ll~g~~~~~~G-~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l 512 (1284)
T 3g5u_A 434 QLMQRLYDPLDG-MVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKL 512 (1284)
T ss_dssp HHTTTSSCCSEE-EEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHS
T ss_pred HHHHCCCCCCCE-EEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHC
T ss_conf 998078899973-8999999877579999986548986887537766999974579899999999999982969999746
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHC
Q ss_conf 99986302679987792799999999986039988998076667199999999999871110896899980574304207
Q 000774 397 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV 476 (1293)
Q Consensus 397 ~~~~~~~i~~~g~~LSGGQkqRi~lAral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~~t~i~vtH~~~~l~~~ 476 (1293)
|+|++|.+|++|.+|||||||||+||||++++|+|+|||||||+||+++++++.+. ++...+++|+|+||||++++..+
T Consensus 513 ~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~l~~i~~~ 591 (1284)
T 3g5u_A 513 PHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAA-LDKAREGRTTIVIAHRLSTVRNA 591 (1284)
T ss_dssp TTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHH-HHHHHTTSEEEEECSCHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH-HHHHCCCCEEEEEECCHHHHHCC
T ss_conf 56334501478786599999999999999529998999798777799999999999-99973999899994077899749
Q ss_pred CEEEEEECCEEEEECCHHHHHHCCHHHHHHHHHHCHHHHHHHHCCC---CCCCCCCC-C-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 9699980975877139678831407899999982001232320015---86556778-8-88788888989876333111
Q 000774 477 DRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKED---GETVDNKT-S-KPAANGVDNDLPKEASDTRK 551 (1293)
Q Consensus 477 d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 551 (1293)
|+|++|++|+++++|+|+++.+.++.|..++..+....+....... ........ . ................. ..
T Consensus 592 d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 670 (1284)
T 3g5u_A 592 DVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSI-CG 670 (1284)
T ss_dssp SEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC---------------------------------------------
T ss_pred CEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
T ss_conf 98999989999997889999867877999999743002211133333322222344333333332000345433344-56
Q ss_pred CCCCCCCCHHHHH--HHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------CC
Q ss_conf 2235331002434--311753299999999970105999999999999999886466466451367876888------83
Q 000774 552 TKEGKSVLIKQEE--RETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH------GP 623 (1293)
Q Consensus 552 ~~~~~~~~~~~~~--~~~g~~~~~~~~~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~------~~ 623 (1293)
..........++. ......++..+.++.+.. ++.+++.+++.++...+....+.++..+.+....... ..
T Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 748 (1284)
T 3g5u_A 671 PHDQDRKLSTKEALDEDVPPASFWRILKLNSTE--WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNS 748 (1284)
T ss_dssp -------------CCCCCSCCCTTHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHH
T ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 422332110245553136625899999984515--799999999999999999999999999999985568503367799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 38999999999999999999999999999999999999999999739942101--2461147998711534597788999
Q 000774 624 LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFH--TNPLGRIINRFAKDLGDIDRNVAVF 701 (1293)
Q Consensus 624 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~--~~~~G~ilsrlt~Di~~i~~~~~~~ 701 (1293)
..+..++..+++...++.++..++....+.+...++|..++++++++|+.||+ ++++|++++|+++|+..++..+...
T Consensus 749 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~ 828 (1284)
T 3g5u_A 749 NLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSR 828 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999839988875789988999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCH
Q ss_conf 99999999999999999999998999999999999999999999999999999999618299999999856999999407
Q 000774 702 VNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKA 781 (1293)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~ 781 (1293)
+..++..+..++..+++++..+|.+.++++..+++++.......+.............+.....+.|.+.|++++|+|+.
T Consensus 829 l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~ 908 (1284)
T 3g5u_A 829 LAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTR 908 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999969999999999999999999999999999999999999999999999988999998465
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999998899999999999999999999998--73486542133498999999999999999
Q 000774 782 YDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSL 859 (1293)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 859 (1293)
++++.+.+.+..+...+..........+.....+.+..+...+..++.. +..+..+.. .+..++.+......+
T Consensus 909 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~-----~~~~~~~~~~~~~~~ 983 (1284)
T 3g5u_A 909 EQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFE-----NVLLVFSAIVFGAMA 983 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCST-----THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999999999990980699-----999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEECCCCE
Q ss_conf 99999999999999799999852105899896556789999999997539999889993699-99820001389649988
Q 000774 860 LTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDK 938 (1293)
Q Consensus 860 ~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~ 938 (1293)
+..+............+.+|+.++++.+++.....+ ...+.++..+.++++||+|+|++. ..++|+|+||++++||+
T Consensus 984 ~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~ 1061 (1284)
T 3g5u_A 984 VGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQT 1061 (1284)
T ss_dssp HHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCE
T ss_conf 999999999999999999999999838876666555--665456777857999989977999987002030599769988
Q ss_pred EEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCCC---CCCHHHH
Q ss_conf 9999699998899999995277788636999996168989688855016872666545656766047799---9998789
Q 000774 939 VGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDADL 1015 (1293)
Q Consensus 939 ~~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~---~~~~~~i 1015 (1293)
+||+||||||||||+++|.|+++|++|+|.+||.|++..++..+|++++||||++.+|++|++||+.+.. ..+++++
T Consensus 1062 v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i 1141 (1284)
T 3g5u_A 1062 LALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEI 1141 (1284)
T ss_dssp EEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHH
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHH
T ss_conf 99988999978999999946867899779899998000789999702689877874066669999746687789999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 99999930999998715995136312999999458999999998513998899838888999998999999999882894
Q 000774 1016 WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSC 1095 (1293)
Q Consensus 1016 ~~~l~~~~~~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~ 1095 (1293)
+++++.++++++++++|.|+++.+++.|.+||||||||++||||++++|+||||||||++||+.+++.+++.|++..+++
T Consensus 1142 ~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~ 1221 (1284)
T 3g5u_A 1142 VRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGR 1221 (1284)
T ss_dssp HHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSS
T ss_pred HHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99999839599997270424561178889338999999999999974999999868755579999999999999867999
Q ss_pred EEEEEECCCCHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHC
Q ss_conf 799970593101014889999598586643924664049982789998402
Q 000774 1096 TMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTG 1146 (1293)
Q Consensus 1096 tvi~vsH~~~~~~~~d~v~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 1146 (1293)
|+|+||||++++..||||++|++|++++.|+|++++++ ++.|.+++....
T Consensus 1222 tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1222 TCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQA 1271 (1284)
T ss_dssp CEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC
T ss_pred EEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 89999558799980998999989989997789999847-777999999976
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=688.09 Aligned_cols=513 Identities=20% Similarity=0.284 Sum_probs=433.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999973994210124611479987115345977889999999
Q 000774 626 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMF 705 (1293)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~ 705 (1293)
+.+.+..++++..++.++..++..+.+.+...++|.++++|++++|+.||+++++|++++|+++|++.+++.+...+..+
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~ 217 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMA 217 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999978898998799848999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHH
Q ss_conf 99999999999999999989999999999999999999999999999999996182999999998569999994079999
Q 000774 706 MGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRM 785 (1293)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~ 785 (1293)
+..+..++..++++++.+|.+.++++..+++++++...+.+...+..+......+...+.+.|.++|+++||+|+.++++
T Consensus 218 ~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 297 (1321)
T 4f4c_A 218 FQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYE 297 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999999999999899999999999999999999999999999999999999999999999839999982142999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999998899999999999999999999998--734865421334989999999999999999999
Q 000774 786 ADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAV 863 (1293)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 863 (1293)
.+++.+..+...+..........+......++..+...++.+++. +..+..+ .+.+..++.+...+..++..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt-----~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 298 LERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLN-----FGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSC-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999999959986-----999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEECCCCEEEEE
Q ss_conf 9999999999799999852105899896556789999999997539999889993699-998200013896499889999
Q 000774 864 LRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIV 942 (1293)
Q Consensus 864 ~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~~~iv 942 (1293)
......+.....+.+|+.++++.+++.+... .......+..+.|+++||+|+|++. ..++|+|+||++++|+++||+
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaiv 450 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALV 450 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEE
T ss_conf 9999999999999999999971785345666--55656778887679998554079999874333318862288278998
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHH
Q ss_conf 6999988999999952777886369999961689896888550168726665456567660477999-998789999999
Q 000774 943 GRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALER 1021 (1293)
Q Consensus 943 G~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~-~~~~~i~~~l~~ 1021 (1293)
||||||||||+++|.|+|+|++|+|.+||+|+++++..++|++|+||||+|++|++|||||+.++.+ .+++++++|++.
T Consensus 451 G~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~ 530 (1321)
T 4f4c_A 451 GSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKM 530 (1321)
T ss_dssp ECSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 05898577888875456516448615799650112599985046665875332078616788641552209999999987
Q ss_pred HHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 30999998715995136312999999458999999998513998899838888999998999999999882894799970
Q 000774 1022 AHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 1101 (1293)
Q Consensus 1022 ~~~~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vs 1101 (1293)
++++++++.+|.|++|.++++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++..+++|+|+||
T Consensus 531 a~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiia 610 (1321)
T 4f4c_A 531 ANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIA 610 (1321)
T ss_dssp TTCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEEC
T ss_pred CCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 56546887088888607558988777778799999998725999899845544688789999999999984798899973
Q ss_pred CCCCHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHC
Q ss_conf 593101014889999598586643924664049982789998402
Q 000774 1102 HRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTG 1146 (1293)
Q Consensus 1102 H~~~~~~~~d~v~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 1146 (1293)
||++++..||+|++|++|+|++.|+|+||+++ ++.|++++....
T Consensus 611 Hrls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 611 HRLSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQT 654 (1321)
T ss_dssp SCTTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHH
T ss_pred CCHHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHH
T ss_conf 63878986898999639965136899999985-327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=647.22 Aligned_cols=512 Identities=20% Similarity=0.287 Sum_probs=418.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999973994210124611479987115345977889999999
Q 000774 626 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMF 705 (1293)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~ 705 (1293)
+...+.+++++..++.++..++....+.+...++|..++++++++|+.||+++++|++++|+++|++.++..+...+..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~ 189 (1284)
T 3g5u_A 110 YAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMF 189 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999986998997568877899999988999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHH
Q ss_conf 99999999999999999989999999999999999999999999999999996182999999998569999994079999
Q 000774 706 MGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRM 785 (1293)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~ 785 (1293)
+..+..++..++++++.+|.+.+++++++++++.+..++.+..++..+......++..+.+.|.++|+++||+|+.++++
T Consensus 190 ~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~ 269 (1284)
T 3g5u_A 190 FQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKE 269 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHH
T ss_conf 99999999999999999899999999999999999999999999999999999999999999999787999984653999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999998899999999999999999999998--734865421334989999999999999999999
Q 000774 786 ADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAV 863 (1293)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 863 (1293)
.+++.+..+...+..........+......++..+...+..++.. +..+..+.. .+..++.+......++..+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g-----~~~~~~~~~~~~~~~~~~~ 344 (1284)
T 3g5u_A 270 LERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIG-----QVLTVFFSVLIGAFSVGQA 344 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSS-----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-----HHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999992998899-----9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEECCCCEEEEE
Q ss_conf 9999999999799999852105899896556789999999997539999889993699-998200013896499889999
Q 000774 864 LRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIV 942 (1293)
Q Consensus 864 ~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~~~iv 942 (1293)
...+..++....+.+|+.++++.+++.+...+...+ ..+..+.|+++||+|+|+++ ..++|+|+||++++||++||+
T Consensus 345 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~--~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~iv 422 (1284)
T 3g5u_A 345 SPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHK--PDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALV 422 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCC--CTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEE
T ss_conf 999999999999999999997289867766656777--777777189999899769999871012545897599889998
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHH
Q ss_conf 699998899999995277788636999996168989688855016872666545656766047799-9998789999999
Q 000774 943 GRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALER 1021 (1293)
Q Consensus 943 G~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~i~~~l~~ 1021 (1293)
||||||||||+++|.|+++|++|+|.+||.|++.+++.++|++|+||||+|.+|++|++||+.+.. +.++++++++++.
T Consensus 423 G~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~ 502 (1284)
T 3g5u_A 423 GNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKE 502 (1284)
T ss_dssp CCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 99999799999998078899973899999987757999998654898688753776699997457989999999999998
Q ss_pred HHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 30999998715995136312999999458999999998513998899838888999998999999999882894799970
Q 000774 1022 AHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 1101 (1293)
Q Consensus 1022 ~~~~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vs 1101 (1293)
++++++++++|.|+++.+++.|.+||||||||++||||++++|+|||||||||+||+++++.+++.++...+++|+|+||
T Consensus 503 ~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~it 582 (1284)
T 3g5u_A 503 ANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIA 582 (1284)
T ss_dssp TTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 29699997465633450147878659999999999999952999899979877779999999999999973999899994
Q ss_pred CCCCHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 59310101488999959858664392466404998278999840
Q 000774 1102 HRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 1145 (1293)
Q Consensus 1102 H~~~~~~~~d~v~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 1145 (1293)
||++++..||+|++|++|++++.|+|++++++ ++.|.+++...
T Consensus 583 H~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 625 (1284)
T 3g5u_A 583 HRLSTVRNADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQ 625 (1284)
T ss_dssp SCHHHHTTCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHT
T ss_pred CCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 07789974998999989999997889999867-87799999974
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=631.90 Aligned_cols=551 Identities=22% Similarity=0.331 Sum_probs=439.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5999999999999999886466466451367876888833--89999999999999999999999999999999999999
Q 000774 585 LWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL--FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDA 662 (1293)
Q Consensus 585 ~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 662 (1293)
++.+++.+++.++...+.+..|++++.++|.......... .+...+..+.+...++.+...++....+.+...++|..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 101 (587)
T 3qf4_A 22 WIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTVFASYASQNFGADLRRD 101 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998736987999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999739942101246114799871153459778899999999999999999999999998999999999999999999
Q 000774 663 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYL 742 (1293)
Q Consensus 663 ~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 742 (1293)
+++++++.|+.+|+++++|++++|+++|++.++..+...+..++.....++..+++++.++|.+.++++..+++++.+..
T Consensus 102 l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~~~~~~~~ 181 (587)
T 3qf4_A 102 LFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLIFLIPPIVLLFV 181 (587)
T ss_dssp HHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999788979976588899999999999999999999999999999999999999999989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999961829999999985699999940799999999999999999999999988999999999999999
Q 000774 743 YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMI 822 (1293)
Q Consensus 743 ~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (1293)
.+.+..++..+...+..+.+.+.+.|.++|++++|+|+.++.+.+++.+..+...+..........+......++..+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (587)
T 3qf4_A 182 WLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFALPLFIFIVNMGM 261 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999985599999862149999999999999999999999999999999999999999
Q ss_pred HHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9999999--87348654213349899999999999999999999999999999799999852105899896556789999
Q 000774 823 WLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 900 (1293)
Q Consensus 823 ~~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~ 900 (1293)
.++.++. .+..+..+ .+.+..++.+...+..++..+...+..+.....+.+|+.++++.+++.+. ...+.
T Consensus 262 ~~vl~~g~~~v~~g~lt-----~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~~~~ 333 (587)
T 3qf4_A 262 IAVLWFGGVLVRNNQME-----IGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE---ADNAL 333 (587)
T ss_dssp HHHHHHHHHHHHTTSSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC---CTTCB
T ss_pred HHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---CCCCC
T ss_conf 99999999999849938-----99999999999999999999999999999999999999999768976578---87765
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH
Q ss_conf 99999753999988999369999820001389649988999969999889999999527778863699999616898968
Q 000774 901 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 980 (1293)
Q Consensus 901 ~~~~~~~~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~ 980 (1293)
+.++..+.|+++||+|+|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.|+++++..
T Consensus 334 ~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~i~~~~~~ 413 (587)
T 3qf4_A 334 ALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLK 413 (587)
T ss_dssp CCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSBGGGBCHH
T ss_pred CCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH
T ss_conf 66888880799788998489997642111799869988999899999799999999278669986798999983407899
Q ss_pred HHHHHCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 8855016872666545656766047799-999878999999930999998715995136312999999458999999998
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~i~~~l~~~~~~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
++|++++|+||++.+|++|++||+.+.. ..++++++++++.++++++++.+|.|+++.+++.|.+||||||||++||||
T Consensus 414 ~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQrv~lARa 493 (587)
T 3qf4_A 414 DLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARA 493 (587)
T ss_dssp HHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHHHHHHHHH
T ss_pred HHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 99841389778986767559999852488999999999999968499997565312127518989929999999999999
Q ss_pred HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHH
Q ss_conf 51399889983888899999899999999988289479997059310101488999959858664392466404998278
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1060 ll~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vsH~~~~~~~~d~v~vl~~G~i~~~g~~~~l~~~~~~~~~ 1139 (1293)
++++|++|||||||++||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.|+|+|++++ ++.|.
T Consensus 494 l~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~~-~~~~~ 572 (587)
T 3qf4_A 494 LVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLEH-CKPYR 572 (587)
T ss_dssp HHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHHH-CHHHH
T ss_pred HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHH
T ss_conf 97299999997975447999999999999986799989998227688981998999989989997889999867-83999
Q ss_pred HHHHH
Q ss_conf 99984
Q 000774 1140 KMVQS 1144 (1293)
Q Consensus 1140 ~~~~~ 1144 (1293)
+++..
T Consensus 573 ~~~~~ 577 (587)
T 3qf4_A 573 EIYES 577 (587)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=631.82 Aligned_cols=549 Identities=25% Similarity=0.367 Sum_probs=454.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 599999999999999988646646645136787688883--389999999999999999999999999999999999999
Q 000774 585 LWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGP--LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDA 662 (1293)
Q Consensus 585 ~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 662 (1293)
++.+++.+++.++...+.+..|++++.++|......... ..+..++.++.++..++.+...++....+.+...++|..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 115 (598)
T 3qf4_B 36 TFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKE 115 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999736888999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999739942101246114799871153459778899999999999999999999999998999999999999999999
Q 000774 663 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYL 742 (1293)
Q Consensus 663 ~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 742 (1293)
++++++++|+.||+++++|++++|+++|++.++..+...+..++..+..++..+++++..+|.+.++.+..+++++.+..
T Consensus 116 l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~~~~~~ 195 (598)
T 3qf4_B 116 LFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQ 195 (598)
T ss_dssp HHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999779999976888899999999999999999999999999999999999999999989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999961829999999985699999940799999999999999999999999988999999999999999
Q 000774 743 YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMI 822 (1293)
Q Consensus 743 ~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (1293)
.+.+..++..+......+.+.+.+.|.++|++++|+|+.++++.+++.+..+...+..........+......++..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (598)
T 3qf4_B 196 IVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGF 275 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999973799999748709999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999998--7348654213349899999999999999999999999999999799999852105899896556789999
Q 000774 823 WLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 900 (1293)
Q Consensus 823 ~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~ 900 (1293)
.++.+++. +..+..+ .+.+..++.+...+..++..+...+..++....+.+|+.++++.+++.+. ....
T Consensus 276 ~~~~~~g~~l~~~g~ls-----~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~----~~~~ 346 (598)
T 3qf4_B 276 ALISGFGGWLALKDIIT-----VGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD----PDAV 346 (598)
T ss_dssp HHHHHHHHHHGGGTSSC-----HHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC----SSCC
T ss_pred HHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCC
T ss_conf 99999999999859978-----99999999999999999999999999999999999999999768877777----7777
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH
Q ss_conf 99999753999988999369999820001389649988999969999889999999527778863699999616898968
Q 000774 901 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 980 (1293)
Q Consensus 901 ~~~~~~~~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~I~i~g~~i~~~~~~ 980 (1293)
+.++..+.|+++||+|+|+++ .++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.|+.+.+..
T Consensus 347 ~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~ 425 (598)
T 3qf4_B 347 ELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRS 425 (598)
T ss_dssp CCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHH
T ss_pred CCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHH
T ss_conf 777777718999989977999-8601222799869988999899999699999999458579980899999983018899
Q ss_pred HHHHHCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 8855016872666545656766047799-999878999999930999998715995136312999999458999999998
Q 000774 981 DLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1059 (1293)
Q Consensus 981 ~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~i~~~l~~~~~~~~i~~lp~gl~~~~~~~~~~LSgGqkqrl~lAra 1059 (1293)
.+|++++|+||++.+|++|++||+.+.. ..++++++++++.++++++++++|.|+++.+++.|.+||||||||++||||
T Consensus 426 ~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAra 505 (598)
T 3qf4_B 426 SLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRA 505 (598)
T ss_dssp HHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 99841089907982324639999744799999999999999969788897464532364227889879999999999999
Q ss_pred HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHH
Q ss_conf 51399889983888899999899999999988289479997059310101488999959858664392466404998278
Q 000774 1060 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 1139 (1293)
Q Consensus 1060 ll~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vsH~~~~~~~~d~v~vl~~G~i~~~g~~~~l~~~~~~~~~ 1139 (1293)
++++|++|||||||++||+.+++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.|+|+|++++ ++.|.
T Consensus 506 l~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~ 584 (598)
T 3qf4_B 506 FLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQK-RGFYY 584 (598)
T ss_dssp HHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHT-TCHHH
T ss_pred HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHH
T ss_conf 96499999998976679999999999999998089989999427789971998999989999987789999867-87799
Q ss_pred HHHHH
Q ss_conf 99984
Q 000774 1140 KMVQS 1144 (1293)
Q Consensus 1140 ~~~~~ 1144 (1293)
+++..
T Consensus 585 ~~~~~ 589 (598)
T 3qf4_B 585 ELFTS 589 (598)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=623.32 Aligned_cols=559 Identities=21% Similarity=0.307 Sum_probs=441.6
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---C-H-----HHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999701059999999999999998864664664513678768888---3-3-----89999999999999999999
Q 000774 574 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG---P-L-----FYNTIYSLLSFGQVLVTLAN 644 (1293)
Q Consensus 574 ~~~~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~---~-~-----~~~~~~~~l~~~~~~~~~~~ 644 (1293)
.+++|.++. ++.+++.+++.++...+.+..|.++++.+|........ . . .+...+.++.++..++.+..
T Consensus 4 ~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 4 RYLQFVKPY--KYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHGGG--HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998899--999999999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999739942101246114799871153459778899999999999999999999999998
Q 000774 645 SYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVST 724 (1293)
Q Consensus 645 ~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 724 (1293)
.++....+.+...++|..++++++++|+.||+++++|++++|+++|++.++..+...+..++..+..++..+++++..+|
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 161 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDV 161 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976898699999999999999999999999999999999999999999969
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999961829999999985699999940799999999999999999999999
Q 000774 725 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNM 804 (1293)
Q Consensus 725 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1293)
.+.++.+..+++++.+...+.+..++..+......++..+.+.|.++|++++|+|+.++.+.+++.+..+...+......
T Consensus 162 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 241 (578)
T 4a82_A 162 KLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHT 241 (578)
T ss_dssp TTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999982499999816649999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9889999999999999999999999--87348654213349899999999999999999999999999999799999852
Q 000774 805 GANRWLAIRLEIVGGLMIWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGN 882 (1293)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~ 882 (1293)
....+.......+..+...++.+++ .+..+..+ .+.+..++.+...+..++..+...+...+....+.+|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~ 316 (578)
T 4a82_A 242 RWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSIT-----VGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQ 316 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-----HHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999859958-----9999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 10589989655678999999999753999988999369999820001389649988999969999889999999527778
Q 000774 883 YIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL 962 (1293)
Q Consensus 883 ~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p 962 (1293)
+++.+++.+. ...+.+..+..+.++++||+|+|++..+++|+|+||++++||++||+||||||||||+++|.|+++|
T Consensus 317 ~l~~~~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p 393 (578)
T 4a82_A 317 LIDEDYDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDV 393 (578)
T ss_dssp HHTCCCSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCC
T ss_pred HHCCCCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9768976667---8776666777880799999997589997413433799879999999899998599999998467889
Q ss_pred CCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
Q ss_conf 8636999996168989688855016872666545656766047799-999878999999930999998715995136312
Q 000774 963 ERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSE 1041 (1293)
Q Consensus 963 ~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~-~~~~~~i~~~l~~~~~~~~i~~lp~gl~~~~~~ 1041 (1293)
++|+|.+||.|+++.+..++|++++|+||++.+|++|++||+.+.. ..++++++++++.++++++++++|.|+++.+++
T Consensus 394 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~ 473 (578)
T 4a82_A 394 TSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGE 473 (578)
T ss_dssp SEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCG
T ss_pred CCCEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCC
T ss_conf 99679999998442789999600689928983476459999852799988999999998809599997573301025306
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEEECCEE
Q ss_conf 99999945899999999851399889983888899999899999999988289479997059310101488999959858
Q 000774 1042 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1042 ~~~~LSgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vsH~~~~~~~~d~v~vl~~G~i 1121 (1293)
.|.+||||||||++||||++++|++|||||||++||+++++.+.+.+++..+++|+|++|||++++..||+|++|++|++
T Consensus 474 ~g~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 553 (578)
T 4a82_A 474 RGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHI 553 (578)
T ss_dssp GGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 88967999999999999997499999997865457999999999999998089979998317899971998999989989
Q ss_pred EEECCHHHHHHCCCCHHHHHHH
Q ss_conf 6643924664049982789998
Q 000774 1122 LEYDTPEELLSNEGSSFSKMVQ 1143 (1293)
Q Consensus 1122 ~~~g~~~~l~~~~~~~~~~~~~ 1143 (1293)
++.|+|+|++++ ++.|.+++.
T Consensus 554 ~~~g~~~el~~~-~~~~~~~~~ 574 (578)
T 4a82_A 554 VETGTHRELIAK-QGAYEHLYS 574 (578)
T ss_dssp EEEECHHHHHHT-TSHHHHHHT
T ss_pred EEECCHHHHHHC-CCHHHHHHH
T ss_conf 998889999858-838999998
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=616.93 Aligned_cols=559 Identities=22% Similarity=0.291 Sum_probs=456.9
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-HHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999997010599999999999999988646646645136787688883-3899-99999999999999999999999
Q 000774 573 KVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGP-LFYN-TIYSLLSFGQVLVTLANSYWLII 650 (1293)
Q Consensus 573 ~~~~~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 650 (1293)
+.+.+|.+.. ++.+++.+++.++...+....|.+++.++|......... ..+. ..+.++.++..++.+...++...
T Consensus 14 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (582)
T 3b60_A 14 RRLWPTIAPF--KAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISW 91 (582)
T ss_dssp HHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999--99999999999999999999999999999988436865799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999739942101246114799871153459778899999999999999999999999998999999
Q 000774 651 SSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAI 730 (1293)
Q Consensus 651 ~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1293)
.+.+...++|..++++++++|+.||+++++|++++|+++|++.++..+...+..++..+..++..++++++.+|.+.+++
T Consensus 92 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 171 (582)
T 3b60_A 92 VSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIIL 171 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999809999978898658999999879999999999999999999999999999999809999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999961829999999985699999940799999999999999999999999988999
Q 000774 731 MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL 810 (1293)
Q Consensus 731 ~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1293)
+..+++++.+...+.+..++..+...+..+.+.+.+.|.++|++++|+|+.++++.+++.+..+...+..........+.
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3b60_A 172 VVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSIS 251 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999996199999837689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999998--7348654213349899999999999999999999999999999799999852105899
Q 000774 811 AIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 888 (1293)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~ 888 (1293)
.....++..+...++.+++. +..+..+ .+.+..++.+...+..++..+...+...+....+.+|+.++++.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b60_A 252 DPIIQLIASLALAFVLYAASFPSVMDSLT-----AGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQ 326 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSTTSSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999849998-----9999999999999999999999999999999999999999975998
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 89655678999999999753999988999369999820001389649988999969999889999999527778863699
Q 000774 889 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRIL 968 (1293)
Q Consensus 889 e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~I~ 968 (1293)
+.+. .. .+.++..+.|+++||+|+|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.
T Consensus 327 ~~~~---~~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 401 (582)
T 3b60_A 327 EKDE---GK--RVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHIL 401 (582)
T ss_dssp SCCC---CC--BCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEE
T ss_pred CCCC---CC--CCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 7667---77--777788884799988997399997441561599769998999899999899999998610689897697
Q ss_pred ECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC
Q ss_conf 9996168989688855016872666545656766047799--99987899999993099999871599513631299999
Q 000774 969 IDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1046 (1293)
Q Consensus 969 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~--~~~~~~i~~~l~~~~~~~~i~~lp~gl~~~~~~~~~~L 1046 (1293)
+||.|+++.+...+|++++|+||++.+|++|++||+.+.. +.++++++++++.++++++++++|.|+++.+++.|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~L 481 (582)
T 3b60_A 402 MDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLL 481 (582)
T ss_dssp ETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSS
T ss_pred ECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998230699999960808806874778789999854599998999999999984979999845041145114798878
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEEECCEEEEECC
Q ss_conf 94589999999985139988998388889999989999999998828947999705931010148899995985866439
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vsH~~~~~~~~d~v~vl~~G~i~~~g~ 1126 (1293)
|||||||++||||++++|++|||||||++||+++++.+.+.|++..+++|+|++|||++.+..||+|++|++|++++.|+
T Consensus 482 SgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b60_A 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGT 561 (582)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999728998999786555798999999999999967997999945477898599899997888988458
Q ss_pred HHHHHHCCCCHHHHHHHH
Q ss_conf 246640499827899984
Q 000774 1127 PEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1127 ~~~l~~~~~~~~~~~~~~ 1144 (1293)
|+|++++ ++.|.+++..
T Consensus 562 ~~~l~~~-~~~~~~~~~~ 578 (582)
T 3b60_A 562 HSELLAQ-HGVYAQLHKM 578 (582)
T ss_dssp HHHHHHH-TSSHHHHHHH
T ss_pred HHHHHHC-CCHHHHHHHH
T ss_conf 9999876-9889999997
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=616.53 Aligned_cols=559 Identities=22% Similarity=0.319 Sum_probs=454.5
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999970105999999999999999886466466451367876888-833899-99999999999999999999999
Q 000774 573 KVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPLFYN-TIYSLLSFGQVLVTLANSYWLII 650 (1293)
Q Consensus 573 ~~~~~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 650 (1293)
+.+++|.+.. ++.+++.+++.++...+....|.+++.++|....... ....+. ..+.++.++..++.+...++...
T Consensus 14 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (582)
T 3b5x_A 14 KRLWTYIRLY--KAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSW 91 (582)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998899--99999999999999999999999999999998646866799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999739942101246114799871153459778899999999999999999999999998999999
Q 000774 651 SSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAI 730 (1293)
Q Consensus 651 ~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1293)
.+.+...++|..+++++++.|+.||+++++|++++|+++|++.++..+...+..++..+..++..++++++.+|.+.+++
T Consensus 92 ~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 171 (582)
T 3b5x_A 92 VSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVL 171 (582)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999869999977898789999999889999999999999999999999999999999829999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999961829999999985699999940799999999999999999999999988999
Q 000774 731 MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL 810 (1293)
Q Consensus 731 ~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1293)
+..+++++.+...+.+..++..+...+..+.+.+.+.|.++|++++|+|+.++++.+++.+..+...+..........+.
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3b5x_A 172 IVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIA 251 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999995199999708759999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999998--7348654213349899999999999999999999999999999799999852105899
Q 000774 811 AIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 888 (1293)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~ 888 (1293)
.....++..+...++.+++. +..+..+ .+.+..++.+...+..++..+...+...+....+.+|+.++++.++
T Consensus 252 ~~~~~~~~~~~~~~i~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b5x_A 252 DPVIQMIASLALFAVLFLASVDSIRAELT-----PGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999859988-----9999999999999999999999999999999999999999975897
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 89655678999999999753999988999369999820001389649988999969999889999999527778863699
Q 000774 889 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRIL 968 (1293)
Q Consensus 889 e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vsl~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~I~ 968 (1293)
+.+. .. .+.++..+.++++||+|+|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.
T Consensus 327 ~~~~---~~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 401 (582)
T 3b5x_A 327 ERDN---GK--YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSIC 401 (582)
T ss_pred CCCC---CC--CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 6777---77--777778882899998997289986540041699879998999899999799999999657789998798
Q ss_pred ECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC
Q ss_conf 9996168989688855016872666545656766047799--99987899999993099999871599513631299999
Q 000774 969 IDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1046 (1293)
Q Consensus 969 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~--~~~~~~i~~~l~~~~~~~~i~~lp~gl~~~~~~~~~~L 1046 (1293)
+||.|+.+.+...+|++++|+||++.+|++|++||+.+.. +.++++++++++.++++++++++|.|+++.+++.|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~L 481 (582)
T 3b5x_A 402 LDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSL 481 (582)
T ss_pred ECCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCC
T ss_conf 99998563889999648589827990531029999856688999999999999987989999847653345106888847
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEEECCEEEEECC
Q ss_conf 94589999999985139988998388889999989999999998828947999705931010148899995985866439
Q 000774 1047 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1126 (1293)
Q Consensus 1047 SgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vsH~~~~~~~~d~v~vl~~G~i~~~g~ 1126 (1293)
|||||||++||||++++|++|||||||++||+++++.+.+.|++..+++|+|++|||++.+..||+|++|++|++++.|+
T Consensus 482 SgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b5x_A 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561 (582)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999785446899999999999999728998999936889998199899998998999778
Q ss_pred HHHHHHCCCCHHHHHHHH
Q ss_conf 246640499827899984
Q 000774 1127 PEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1127 ~~~l~~~~~~~~~~~~~~ 1144 (1293)
|++++++ .+.|.+++..
T Consensus 562 ~~~l~~~-~~~~~~~~~~ 578 (582)
T 3b5x_A 562 HADLLAQ-DGAYAQLHRI 578 (582)
T ss_pred HHHHHHC-CCHHHHHHHH
T ss_conf 9999848-8589999998
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=615.43 Aligned_cols=560 Identities=22% Similarity=0.297 Sum_probs=444.8
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C---CH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999970105999999999999999886466466451367876888-8---33-8999999999999999999999999
Q 000774 575 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G---PL-FYNTIYSLLSFGQVLVTLANSYWLI 649 (1293)
Q Consensus 575 ~~~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~-~---~~-~~~~~~~~l~~~~~~~~~~~~~~~~ 649 (1293)
+.++.+. .++.+++.+++.++...+....|.+++..+|....... . .. .+...+.++.++..++.+...++..
T Consensus 10 l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (595)
T 2yl4_A 10 LLGLAYP--ERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQ 87 (595)
T ss_dssp HHHHHGG--GHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999887--89999999999999999999999999999999973574026679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999973994210124611479987115345977889999999999999999999999999899999
Q 000774 650 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 729 (1293)
Q Consensus 650 ~~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~ilsrlt~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1293)
..+.+...++|..++++++++|+.||+++++|++++|+++|++.++..+...+..++..+..++..++++++++|.+.++
T Consensus 88 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 167 (595)
T 2yl4_A 88 TSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATF 167 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999981999997779848899999999999999999999999999999999999999981999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999996182999999998569999994079999999999999999999999998899
Q 000774 730 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 809 (1293)
Q Consensus 730 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1293)
++..+++++.+...+.+..++..+......+.+.+.+.|.++|++++|+|+.++++.+++.+..+...+..........+
T Consensus 168 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (595)
T 2yl4_A 168 VLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAG 247 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998119999983756999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999999998--734865421334989999999999999999999999999999979999985210589
Q 000774 810 LAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 887 (1293)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~ 887 (1293)
......++..+...++.+++. +..+..+ .+.+..++.+...+..++..+...+...+....+.+|+.++++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 322 (595)
T 2yl4_A 248 FFGATGLSGNLIVLSVLYKGGLLMGSAHMT-----VGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLERE 322 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999999999869978-----999999999999999999999999999999999999999998389
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 989655678999999999753-9999889993699-99820001389649988999969999889999999527778863
Q 000774 888 SEAPLVIESNRPPPGWPSSGS-IKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 965 (1293)
Q Consensus 888 ~e~~~~~~~~~~~~~~~~~~~-i~~~~v~~~y~~~-~~~~l~~vsl~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G 965 (1293)
++.+.. .. ..+..+..+. |+++||+|+|+++ ..++|+|+||++++||++||+||||||||||+++|.|+++|++|
T Consensus 323 ~~~~~~--~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G 399 (595)
T 2yl4_A 323 PKLPFN--EG-VILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASG 399 (595)
T ss_dssp CSSCSS--CS-BCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEE
T ss_pred CCCCCC--CC-CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 766777--78-777767899838999889985899888120112799849988999899999799999998258578983
Q ss_pred EEEECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHCCCCCC----CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
Q ss_conf 69999961689896888550168726665456567660477999----99878999999930999998715995136312
Q 000774 966 RILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE----HSDADLWEALERAHLKDAIRRNSLGLDAQVSE 1041 (1293)
Q Consensus 966 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~nl~~~~~----~~~~~i~~~l~~~~~~~~i~~lp~gl~~~~~~ 1041 (1293)
+|.+||.|+.+.+...+|++++|+||++.+|++|++||+.+... .++++++++++.++++++++++|.|+++.+++
T Consensus 400 ~i~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~ 479 (595)
T 2yl4_A 400 TISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGE 479 (595)
T ss_dssp EEEETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSS
T ss_pred EEEECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
T ss_conf 79999998111799999732289836883268779999840587766568999999999869799997473201350168
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCEEEEEECCEE
Q ss_conf 99999945899999999851399889983888899999899999999988289479997059310101488999959858
Q 000774 1042 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 1121 (1293)
Q Consensus 1042 ~~~~LSgGqkqrl~lArall~~p~iliLDEpts~lD~~t~~~i~~~l~~~~~~~tvi~vsH~~~~~~~~d~v~vl~~G~i 1121 (1293)
.|.+||||||||++||||++++|++|||||||++||+++++.+.+.|++..+++|+|++|||++++..||+|++|++|++
T Consensus 480 ~~~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i 559 (595)
T 2yl4_A 480 KGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKI 559 (595)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 87868999999999999997599999998866689989999999999999659979999468789975998999989989
Q ss_pred EEECCHHHHHHCCCCHHHHHHHH
Q ss_conf 66439246640499827899984
Q 000774 1122 LEYDTPEELLSNEGSSFSKMVQS 1144 (1293)
Q Consensus 1122 ~~~g~~~~l~~~~~~~~~~~~~~ 1144 (1293)
++.|+|+|++++.++.|.+++..
T Consensus 560 ~~~g~~~~l~~~~~~~~~~~~~~ 582 (595)
T 2yl4_A 560 TEYGKHEELLSKPNGIYRKLMNK 582 (595)
T ss_dssp EEEECSCC------C--------
T ss_pred EEECCHHHHHHCCCHHHHHHHHH
T ss_conf 99788999974787299999997
Done!