Query 000775
Match_columns 1291
No_of_seqs 520 out of 3648
Neff 7.2
Searched_HMMs 46136
Date Mon Apr 1 23:27:40 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000775.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000775hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02906 xanthine dehydrogenas 100.0 1E-261 2E-266 2543.6 135.8 1266 1-1280 43-1317(1319)
2 TIGR02969 mam_aldehyde_ox alde 100.0 7E-258 1E-262 2504.2 132.3 1249 2-1291 64-1328(1330)
3 KOG0430 Xanthine dehydrogenase 100.0 2E-256 4E-261 2289.2 98.4 1183 1-1280 62-1255(1257)
4 PLN00192 aldehyde oxidase 100.0 1E-247 3E-252 2408.8 127.7 1194 2-1282 67-1339(1344)
5 PRK09800 putative hypoxanthine 100.0 3E-167 6E-172 1593.5 89.5 703 525-1274 169-955 (956)
6 TIGR03313 Se_sel_red_Mo probab 100.0 8E-166 2E-170 1582.4 88.6 702 525-1273 165-950 (951)
7 TIGR03311 Se_dep_Molyb_1 selen 100.0 9E-160 2E-164 1519.7 83.4 672 528-1269 162-847 (848)
8 COG4631 XdhB Xanthine dehydrog 100.0 6E-161 1E-165 1346.0 52.1 735 526-1274 17-773 (781)
9 TIGR02965 xanthine_xdhB xanthi 100.0 3E-154 6E-159 1463.2 80.2 734 528-1274 1-756 (758)
10 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 6E-147 1E-151 1392.0 79.0 709 532-1272 1-746 (746)
11 PRK09970 xanthine dehydrogenas 100.0 9E-147 2E-151 1396.4 78.9 708 527-1274 2-755 (759)
12 TIGR03196 pucD xanthine dehydr 100.0 2E-145 4E-150 1380.4 76.5 713 527-1269 2-768 (768)
13 TIGR02416 CO_dehy_Mo_lg carbon 100.0 5E-145 1E-149 1380.3 76.8 703 536-1270 1-769 (770)
14 COG1529 CoxL Aerobic-type carb 100.0 1E-114 2E-119 1093.8 69.6 700 525-1273 3-730 (731)
15 PF02738 Ald_Xan_dh_C2: Molybd 100.0 4E-105 8E-110 990.1 49.7 524 668-1202 15-547 (547)
16 COG4630 XdhA Xanthine dehydrog 100.0 1.9E-97 4E-102 808.0 28.5 414 1-487 68-482 (493)
17 TIGR02963 xanthine_xdhA xanthi 100.0 8.2E-93 1.8E-97 850.4 45.5 405 1-482 60-466 (467)
18 PRK09971 xanthine dehydrogenas 100.0 6.5E-57 1.4E-61 513.4 31.3 280 193-487 6-287 (291)
19 TIGR03195 4hydrxCoA_B 4-hydrox 100.0 1.9E-53 4E-58 484.4 31.1 277 191-484 4-320 (321)
20 TIGR03199 pucC xanthine dehydr 100.0 5.2E-52 1.1E-56 467.6 29.4 261 197-477 1-263 (264)
21 COG1319 CoxM Aerobic-type carb 100.0 3.9E-51 8.4E-56 453.7 26.2 278 191-486 3-282 (284)
22 PRK09799 putative oxidoreducta 100.0 1.1E-47 2.3E-52 429.2 27.0 250 193-486 4-254 (258)
23 TIGR03312 Se_sel_red_FAD proba 100.0 2.2E-47 4.7E-52 426.1 26.1 252 192-487 2-254 (257)
24 PF00941 FAD_binding_5: FAD bi 100.0 3.2E-40 6.9E-45 347.8 14.7 170 191-370 2-171 (171)
25 TIGR03193 4hydroxCoAred 4-hydr 100.0 2.6E-35 5.5E-40 294.8 10.5 95 3-99 53-147 (148)
26 TIGR03198 pucE xanthine dehydr 100.0 9.7E-35 2.1E-39 293.5 10.7 96 3-101 55-150 (151)
27 PRK09908 xanthine dehydrogenas 100.0 1.6E-34 3.4E-39 292.1 11.0 97 3-100 59-156 (159)
28 COG2080 CoxS Aerobic-type carb 100.0 8.2E-34 1.8E-38 282.8 10.5 99 3-102 55-153 (156)
29 PRK11433 aldehyde oxidoreducta 100.0 9E-33 2E-37 292.3 10.3 98 3-102 103-215 (217)
30 PF01799 Fer2_2: [2Fe-2S] bind 100.0 2.5E-31 5.4E-36 237.2 7.8 75 22-98 1-75 (75)
31 PF01315 Ald_Xan_dh_C: Aldehyd 100.0 1.3E-28 2.8E-33 240.4 9.1 107 542-649 1-111 (111)
32 PF03450 CO_deh_flav_C: CO deh 99.7 2E-17 4.2E-22 160.3 12.4 102 378-483 2-103 (103)
33 COG1529 CoxL Aerobic-type carb 99.6 2.8E-15 6.1E-20 191.1 6.8 473 522-1057 179-711 (731)
34 PRK14653 UDP-N-acetylenolpyruv 97.1 0.0025 5.4E-08 73.4 11.3 157 183-369 27-190 (297)
35 PRK14652 UDP-N-acetylenolpyruv 97.1 0.0029 6.4E-08 73.2 11.6 158 183-369 29-192 (302)
36 TIGR00179 murB UDP-N-acetyleno 96.8 0.0094 2E-07 68.6 11.7 158 184-369 7-172 (284)
37 PRK13905 murB UDP-N-acetylenol 96.6 0.0083 1.8E-07 69.6 10.2 160 183-370 24-190 (298)
38 PRK13906 murB UDP-N-acetylenol 96.5 0.018 3.9E-07 66.9 11.4 155 188-370 34-195 (307)
39 PRK14650 UDP-N-acetylenolpyruv 96.4 0.023 5.1E-07 65.4 11.9 158 182-370 25-192 (302)
40 PF01565 FAD_binding_4: FAD bi 96.4 0.0085 1.8E-07 61.2 7.3 102 193-315 3-109 (139)
41 COG0277 GlcD FAD/FMN-containin 96.0 0.011 2.4E-07 72.8 6.9 103 192-314 33-139 (459)
42 PRK12436 UDP-N-acetylenolpyruv 95.9 0.044 9.6E-07 63.7 11.2 152 191-370 37-195 (305)
43 PRK11183 D-lactate dehydrogena 95.8 0.021 4.5E-07 69.9 8.0 106 191-313 39-151 (564)
44 PRK00046 murB UDP-N-acetylenol 95.2 0.11 2.4E-06 60.9 11.0 153 183-369 14-185 (334)
45 TIGR01676 GLDHase galactonolac 95.2 0.055 1.2E-06 67.1 8.8 102 191-314 62-167 (541)
46 TIGR01678 FAD_lactone_ox sugar 95.1 0.07 1.5E-06 65.2 9.3 156 192-370 16-179 (438)
47 COG0812 MurB UDP-N-acetylmuram 95.0 0.23 4.9E-06 56.8 12.1 165 183-372 14-183 (291)
48 PRK13903 murB UDP-N-acetylenol 94.9 0.11 2.5E-06 61.5 10.0 143 182-357 25-179 (363)
49 PRK14649 UDP-N-acetylenolpyruv 94.8 0.15 3.2E-06 59.2 10.5 161 182-370 13-190 (295)
50 PLN02465 L-galactono-1,4-lacto 94.8 0.14 3E-06 64.1 10.7 103 191-315 97-203 (573)
51 PRK11230 glycolate oxidase sub 94.5 0.089 1.9E-06 65.5 8.0 103 192-313 57-163 (499)
52 TIGR00387 glcD glycolate oxida 94.4 0.06 1.3E-06 65.6 6.4 100 195-313 2-105 (413)
53 TIGR01677 pln_FAD_oxido plant- 94.1 0.35 7.6E-06 60.8 12.3 161 192-371 33-210 (557)
54 PRK14648 UDP-N-acetylenolpyruv 94.0 0.32 6.9E-06 57.2 10.8 85 182-270 22-112 (354)
55 PRK14651 UDP-N-acetylenolpyruv 94.0 0.35 7.5E-06 55.2 10.8 154 183-371 14-169 (273)
56 PLN02805 D-lactate dehydrogena 93.9 0.13 2.9E-06 64.5 8.0 101 192-313 135-239 (555)
57 TIGR01679 bact_FAD_ox FAD-link 93.3 0.18 4E-06 61.4 7.6 101 192-314 13-114 (419)
58 PRK09970 xanthine dehydrogenas 91.9 2.9 6.2E-05 55.1 16.3 191 702-895 457-737 (759)
59 PRK11282 glcE glycolate oxidas 91.1 0.49 1.1E-05 56.2 7.3 95 200-314 7-102 (352)
60 PLN02441 cytokinin dehydrogena 90.8 2.7 5.9E-05 52.4 13.7 158 191-370 65-239 (525)
61 TIGR03194 4hydrxCoA_A 4-hydrox 89.0 6.5 0.00014 51.7 15.8 59 703-762 442-511 (746)
62 TIGR03311 Se_dep_Molyb_1 selen 89.0 5.3 0.00011 53.2 15.1 97 3-102 50-146 (848)
63 PRK09800 putative hypoxanthine 86.8 6.8 0.00015 52.7 14.1 98 3-102 54-151 (956)
64 TIGR03313 Se_sel_red_Mo probab 85.3 13 0.00028 50.1 15.7 98 3-102 50-147 (951)
65 TIGR03196 pucD xanthine dehydr 80.0 23 0.00049 46.9 14.7 60 973-1043 182-241 (768)
66 TIGR02416 CO_dehy_Mo_lg carbon 71.2 7.2 0.00016 51.5 6.7 70 706-778 476-556 (770)
67 PLN00192 aldehyde oxidase 64.9 1.2E+02 0.0027 42.7 16.8 59 973-1042 761-819 (1344)
68 TIGR02965 xanthine_xdhB xanthi 64.3 13 0.00029 49.0 7.1 58 704-762 446-514 (758)
69 PRK13904 murB UDP-N-acetylenol 63.5 33 0.00071 39.0 9.1 145 183-371 12-158 (257)
70 PF02738 Ald_Xan_dh_C2: Molybd 60.8 23 0.00049 45.0 8.1 191 973-1254 48-239 (547)
71 PF02594 DUF167: Uncharacteris 57.1 37 0.0008 31.3 6.6 51 978-1028 18-68 (77)
72 TIGR02969 mam_aldehyde_ox alde 54.7 21 0.00045 50.0 6.8 59 703-762 1015-1084(1330)
73 PLN02906 xanthine dehydrogenas 52.9 27 0.00059 48.9 7.4 60 703-763 1010-1080(1319)
74 PRK12386 fumarate reductase ir 48.3 10 0.00022 42.9 1.9 27 2-28 67-93 (251)
75 PF10437 Lip_prot_lig_C: Bacte 46.7 76 0.0017 29.5 7.2 62 379-450 7-68 (86)
76 PF08869 XisI: XisI protein; 37.8 54 0.0012 32.4 4.7 40 976-1025 55-98 (111)
77 PRK00647 hypothetical protein; 27.5 1.4E+02 0.003 28.8 5.5 45 984-1028 25-69 (96)
78 PTZ00397 macrophage migration 26.1 58 0.0013 32.2 2.9 31 999-1029 75-105 (116)
79 PRK05090 hypothetical protein; 22.3 2E+02 0.0044 27.7 5.6 45 984-1028 30-74 (95)
80 PTZ00450 macrophage migration 22.1 63 0.0014 32.0 2.3 28 1000-1027 76-103 (113)
81 PRK01530 hypothetical protein; 21.0 2.1E+02 0.0045 28.1 5.5 44 985-1028 38-81 (105)
No 1
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=1.1e-261 Score=2543.56 Aligned_cols=1266 Identities=80% Similarity=1.302 Sum_probs=1147.7
Q ss_pred CccccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHh
Q 000775 1 MHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESL 79 (1291)
Q Consensus 1 ~~~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~-~~~~~~~i~~~~ 79 (1291)
+|++|||||+|++++||++|+|||||++..+.|||||++|+++|++|||||||||||++++||++++ .| +++||+++|
T Consensus 43 ~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~~-~~~~i~~~l 121 (1319)
T PLN02906 43 VHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQEALASMHGSQCGFCTPGFIMSMYALLRSSKTPP-TEEQIEECL 121 (1319)
T ss_pred CCeEehhhHHHHHHhCCCEEEecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHhCCCCC-CHHHHHHHh
Confidence 3689999999999999999999999984456899999999999999999999999999999999984 67 999999999
Q ss_pred hCcccccCCChhHHHHHHHHHhcccccccccccccccCCccccCCCCCCCCCCCCCCCCCCccccccccCCCcccccccc
Q 000775 80 AGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSE 159 (1291)
Q Consensus 80 ~gnlCrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 159 (1291)
+|||||||||++|++|+++++.+.+.........+++++.+||..++..+.|....++.. ..| + ..+|++
T Consensus 122 ~gnlCRCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~-~~~~~~ 191 (1319)
T PLN02906 122 AGNLCRCTGYRPILDAFRVFAKTDDALYTGVSSLSLQDGEPICPSTGKPCSCGSKTTSAA------GTC---K-SDRFQP 191 (1319)
T ss_pred cCCcccCCCCHHHHHHHHHHHhcccccCCcccchhhhhccccccccCccccccccccccc------ccc---c-cccccc
Confidence 999999999999999999998764210000000022333345532211101100000000 000 0 013333
Q ss_pred ----CCCCcCCcc-ccCCchhhhhcCCCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCcc
Q 000775 160 ----IDGSTYTEK-ELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQ 234 (1291)
Q Consensus 160 ----~~~~~~~~~-~~~~p~~l~~~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~ 234 (1291)
++|++|++. |++||++|+.....++.+.+.++++|++|+||+||+++|+++|++++|||||||+++++++...++
T Consensus 192 ~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~~~P~tl~ea~~ll~~~~~a~ivAGGTdl~~~~~~~~~~~~ 271 (1319)
T PLN02906 192 ISYSEIDGSWYTEKELIFPPELLLRKLTPLKLLGNGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTEVGIEMRFKNAQYP 271 (1319)
T ss_pred ccccccccccCccccccCCHHHhhCCCcceeecCCCCceEECcCCHHHHHHHHHhCCCCEEEEcCchhHHHhhhccCCCC
Confidence 688999999 999999997544445566333578999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccC
Q 000775 235 VLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 314 (1291)
Q Consensus 235 ~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~as 314 (1291)
++|||++|+||++|+.++++|+|||+|||++|+++|.+.+.+.++.+.+.+|.|.+++++|||+||||+||||||||+++
T Consensus 272 ~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~el~~~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~as 351 (1319)
T PLN02906 272 VLISPTHVPELNAIKVKDDGLEIGAAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTAS 351 (1319)
T ss_pred eEEECCCChhhhcEEecCCEEEEecCCcHHHHHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCC
Confidence 99999999999999999999999999999999999888887766667788999999999999999999999999999999
Q ss_pred CCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchhhcce
Q 000775 315 PISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNA 394 (1291)
Q Consensus 315 p~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~ 394 (1291)
|+||++|+|+||||+|+|.+.+|++|+||++|||+||++|+|+++|||++|+||.+....++.+||+++|+++|||+||+
T Consensus 352 P~sD~~p~LlAl~A~v~l~s~~g~~R~vpl~dFf~g~~kt~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~ 431 (1319)
T PLN02906 352 PISDLNPLWMAAGATFVIISCDGDIRSVPASDFFLGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQAHRRDDDIAIVNA 431 (1319)
T ss_pred CchhHHHHHHHcCcEEEEEcCCCCeEEEEHHHhcCccccccCCCCceEEEEEccCCCCCccEEEEEEcCccccchhheee
Confidence 99999999999999999999885479999999999999999999999999999987666788899999999999999999
Q ss_pred EEEEEEecCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHH
Q 000775 395 GMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLS 474 (1291)
Q Consensus 395 A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~ 474 (1291)
|+.++++++++.++|+++||+||||+++|+|+.++|++|.|++|+++++++|++.+.+++.|.++.+++|++||++|+++
T Consensus 432 A~~v~l~~~~~~~~i~~aria~Ggva~~p~ra~~~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ 511 (1319)
T PLN02906 432 GMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALS 511 (1319)
T ss_pred EEEEEEecCCCCceEeEEEEEEeccCCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHH
Confidence 99999974111126999999999999999999999999999999999999999999999998877778999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCccccccccccCCCCCCcccccccCCCCccCCcccccCcccccceeeeccccCCCC
Q 000775 475 FFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMP 554 (1291)
Q Consensus 475 l~~r~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~r~~~~~~q~~~~~~~~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~ 554 (1291)
||+|||+++.+++....+....+++.+.|+.+.++||+|+|+|.|+..+++++|||+++|+|+..||||+++|++|++++
T Consensus 512 ll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~ 591 (1319)
T PLN02906 512 FFFKFFLWVSHQLEADGSTIETFPESHLSAAQPFPRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMP 591 (1319)
T ss_pred HHHHHHHHHhhhccccccccccCChhhccccccccCCCCccceecccccccccCCCCccCcchhhhcceeEEeccCCcCC
Confidence 99999999998874211122347888999999999999999999997788999999999999999999999999999976
Q ss_pred CCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCCCCccccccccCeEeecCCeEEEEEECCHHHH
Q 000775 555 PNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEA 634 (1291)
Q Consensus 555 pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~~~~d~~~la~~~V~y~GqpVa~VvA~t~~~A 634 (1291)
|||||+++||||++||+|++||+|+|++||||++|+|++|+|+.|.+|....|+|+|++++|+|+|||||+|||+|+++|
T Consensus 592 ~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~v~t~~Dip~~~~~g~~~~~~~~la~~~V~y~GqpVa~VvA~t~~~A 671 (1319)
T PLN02906 592 PNTLHAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVPGDNMIGPVVHDEELFATDVVTCVGQVIGVVVADTQENA 671 (1319)
T ss_pred CCCEEEEEEecCcCceEEeecchHHHhCCCCeEEEEchhhCCCCCCCCCCCCCeeEecCcEEEEcCCeEEEEEECCHHHH
Confidence 89999999999999999999999999999999999999999977777776779999999999999999999999999999
Q ss_pred HHhccccceeEeecCCCCCHHHHHhcCCCCCCCcceeecCCcccccccCC--CceEEEEEEEeCcccccCCCCCeeEEEE
Q 000775 635 KLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQ--CDKIIEGEVRVGGQEHFYLEPHSSVVWT 712 (1291)
Q Consensus 635 ~~Aa~lV~V~ye~lp~v~~~~~A~~~~~~~~~~~~~~~~Gdv~~af~~~~--a~~vve~~~~~~~~~H~~mEp~~a~a~~ 712 (1291)
++|+++|+|+||+||+++|+++|++++++|+.....+..||++++| ++ +++|||++|++++|+|+||||++|+|+|
T Consensus 672 ~~Aa~~V~Veye~lp~v~~~~~Al~~~a~~~~~~~~~~~Gdv~~af--~~a~a~~vve~~~~~~~~~H~~mEp~~~~A~~ 749 (1319)
T PLN02906 672 KAAARKVKVEYEELPAILSIEEAIEAGSFHPNTERRLEKGDVELCF--ASGQCDRIIEGEVQMGGQEHFYLEPNSSLVWT 749 (1319)
T ss_pred HHHhCCCEEEEecCCccCCHHHHhcCCCcccCCCceeecCCHHHHh--hccCCceEEEEEEEECCccccccCCCeEEEEE
Confidence 9999999999999999999999999988775333456889999999 88 7999999999999999999999999999
Q ss_pred ecCC-CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHH
Q 000775 713 MDHG-NEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDID 791 (1291)
Q Consensus 713 ~~e~-g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~ 791 (1291)
+ ++ |+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||++|+++||||||+|||+|+
T Consensus 750 ~-~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sReE~ 828 (1319)
T PLN02906 750 S-DSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKLTLDRDVD 828 (1319)
T ss_pred e-CCCCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCccccccccchHHHHHHHHHHHhCCCEEEEecHHHH
Confidence 8 46 689999999999999999999999999999999999999999999865556788999999999999999999999
Q ss_pred HhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccC
Q 000775 792 MMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFR 871 (1291)
Q Consensus 792 ~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~R 871 (1291)
|+++++||++.++||+|+|+||+|++++++++.|+|+|.+++..++.+++.++.++|+|||++++++.|+||+||+||||
T Consensus 829 ~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~R 908 (1319)
T PLN02906 829 MMITGQRHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYEIPNVRIVGNVCFTNFPSNTAFR 908 (1319)
T ss_pred hhhcCCccceEEEEEEEECCCCCEEEEEEEEEecCcccCCcchHHHHHHHHhcCCCccCcceEEEEEEEECCCCCCCccc
Confidence 99999999999999999999999999999999999999988888888888889999999999999999999999999999
Q ss_pred CCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhhHhHhhhhccCc
Q 000775 872 GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNR 951 (1291)
Q Consensus 872 g~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~ 951 (1291)
|||.+|++|++|++||++|++|||||+|||++|++++|+.+++|+.++++.+++||+++++.++|++|++++++||+.|+
T Consensus 909 G~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~ 988 (1319)
T PLN02906 909 GFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSVTHYGQVLQHCTLPQLWDELKVSCDFLKRREEVDEFNAKNR 988 (1319)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCCCcCCccccCCCHHHHHHHHHHhCCHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred ccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCC
Q 000775 952 WKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVP 1031 (1291)
Q Consensus 952 ~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p 1031 (1291)
|+|||+++++.+||.++...+.+++++.|+|+.||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+|
T Consensus 989 ~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p 1068 (1319)
T PLN02906 989 WKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVP 1068 (1319)
T ss_pred CceEEEEEEecccccccccccCCccceEEEEcCCceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCC
Confidence 99999999999999877544456788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCccc
Q 000775 1032 NASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRY 1111 (1291)
Q Consensus 1032 ~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1111 (1291)
++++|+|||+|+++|+||++||++||+||++++++.+..+|++++..+|..+.+|+++++|..|...++|....+.++.|
T Consensus 1069 ~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~~~~~~~~l~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~ 1148 (1319)
T PLN02906 1069 NASPTAASASSDMYGAAVLDACEQIKARMEPVASKLNFSSFAELVTACYFQRIDLSAHGFYITPDIGFDWKTGKGNPFNY 1148 (1319)
T ss_pred CCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhhccCCCeEEEEEecCCCcccccccccCCCccc
Confidence 99999999999999999999999999999999887778999999999987777899999998765556676666777779
Q ss_pred ccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCC
Q 000775 1112 FTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPG 1191 (1291)
Q Consensus 1112 ~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~ 1191 (1291)
|+||+|++|||||++||+++|+|+++++|||++|||.+++|||||||+||||++|+||+.||++.|+|+.+|+++|++|+
T Consensus 1149 ~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~iNP~~~~GQieGg~vqGiG~aL~Ee~~~d~~~~~~~~~G~llt~~~~ 1228 (1319)
T PLN02906 1149 FTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGSLFTCGPG 1228 (1319)
T ss_pred eeeeEEEEEEEEecCCCcEEEEEEEEEEecCccCCHHHHhHhhHHHHHHHHHHHhcCceEEcccccccCCCCccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998656899999999999999
Q ss_pred CCCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHH
Q 000775 1192 SYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMA 1271 (1291)
Q Consensus 1192 ~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a 1271 (1291)
+|++|++.|||.+|+|.+++++++|.+|||+||+||+|++++++|++||+|||++||++.|+.++|++++|+|||||+++
T Consensus 1229 ~Y~iPt~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~~aav~~AI~~Ai~~A~~~~g~~~~~~~~~P~Tperi~~a 1308 (1319)
T PLN02906 1229 TYKIPSVNDIPFKFNVSLLKGAPNPKAIHSSKAVGEPPFFLAASVFFAIKDAIKAARAEVGLHGWFPLDTPATPERIRMA 1308 (1319)
T ss_pred ccCCCCccccCCceEEEEEeCCCCCCCCCcCccCCccccccchHHHHHHHHHHHHHHhhcCCCCcccCCCCCCHHHHHHH
Confidence 99999999999669999996338999999999999999999999999999999999999888888899999999999999
Q ss_pred hcccccccc
Q 000775 1272 CLDEFTAPF 1280 (1291)
Q Consensus 1272 ~~~~~~~~~ 1280 (1291)
|++++++++
T Consensus 1309 ~~~~~~~~~ 1317 (1319)
T PLN02906 1309 CGDEITAPF 1317 (1319)
T ss_pred ccchhhhhh
Confidence 999988764
No 2
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=6.8e-258 Score=2504.18 Aligned_cols=1249 Identities=42% Similarity=0.719 Sum_probs=1129.0
Q ss_pred ccccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhC
Q 000775 2 HCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAG 81 (1291)
Q Consensus 2 ~~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~g 81 (1291)
+++|||||+|+++++|++|+|||||++..+.|||||+||+++|++|||||||||||++++||+++++| +++||+++|+|
T Consensus 64 ~~~v~sCl~~~~~~~g~~v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~~~~p-~~~~i~~~l~g 142 (1330)
T TIGR02969 64 HHPVNACLTPICSLYGAAVTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPEP-TLDQLTDALGG 142 (1330)
T ss_pred CcEEehhHHHHHHhCCCEEEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHcCCCC-CHHHHHHHhcC
Confidence 68999999999999999999999998435679999999999999999999999999999999999999 99999999999
Q ss_pred cccccCCChhHHHHHHHHHhcccccccccccccccC-CccccCCCCCCCCCCCCCCCCCCccccccccCCCccccccccC
Q 000775 82 NLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKE-GEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEI 160 (1291)
Q Consensus 82 nlCrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 160 (1291)
||||||||++|++|+++++.+.. | ++++ +.+||+.+...+.| .|.. | ......+|+.+
T Consensus 143 nlCRCtgY~~i~~a~~~~~~~~~--~------~~~~~~~~~c~~~~~~~~~---------~~~~---~-~~~~~~~~~~~ 201 (1330)
T TIGR02969 143 NLCRCTGYRPIIDACKTFCKTSG--C------CQSKENGVCCLDQGINGLP---------EFEE---G-DETSPELFSEE 201 (1330)
T ss_pred CcccCCCCHHHHHHHHHHhhccC--C------chhccccCccccccccccc---------cccc---c-ccccccccchh
Confidence 99999999999999999986521 1 1222 22356521100000 0110 0 00011256677
Q ss_pred CCCcCCcc-ccCCchhhhhcC---CCC-cccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccE
Q 000775 161 DGSTYTEK-ELIFPPELLLRK---SNP-LNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQV 235 (1291)
Q Consensus 161 ~~~~~~~~-~~~~p~~l~~~~---~~~-~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~ 235 (1291)
++.+|++. ++|||++|+... ..+ +.+ ..++.+|++|+||+||+++|+++|++++|||||||+++++++...++.
T Consensus 202 ~~~~~~~~~~~~fp~~l~~~~~~~~~~~~~~-~~~~~~~~~P~tl~ea~~ll~~~~~a~lvAGGTdl~~~~k~~~~~~~~ 280 (1330)
T TIGR02969 202 EFLPLDPTQELIFPPELMRMAEKQPQRTRVF-YSERMMWISPVTLKELLEAKFKYPQAPVVMGNTSVGPEVKFKGVFHPV 280 (1330)
T ss_pred cccCCCccccccCChhHhhcccccccceeee-cCCCceEECCCCHHHHHHHHHhCCCCEEEecCcchHHHhhhccCCCCe
Confidence 88889988 999999987531 223 445 334579999999999999999999999999999999999999888899
Q ss_pred EEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCC
Q 000775 236 LISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP 315 (1291)
Q Consensus 236 lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp 315 (1291)
+|||++|+||+.|+.++++|+|||+|||++|++.|.+.+.++++...+.+|.|++++++|||+||||+|||||||||+||
T Consensus 281 lIdi~~I~EL~~i~~~~~~l~IGA~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP 360 (1330)
T TIGR02969 281 IISPDRIEELSVVNHTGDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHL 360 (1330)
T ss_pred EEECCCChhhhcEEEcCCEEEEeccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCC
Confidence 99999999999999999999999999999999988888776666666789999999999999999999999999999999
Q ss_pred CCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHh-ccCccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchhhcce
Q 000775 316 ISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFF-LGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNA 394 (1291)
Q Consensus 316 ~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~-~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~ 394 (1291)
+||++|+|+||||+|+|.+.+| +|+||++||| .+|++|+|+++|||++|.||.+..+.++++||+++|+++|||+||+
T Consensus 361 ~sD~~p~LlAl~A~v~l~s~~g-~R~vpl~dff~~~~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~ 439 (1330)
T TIGR02969 361 DSDLNPLLAVGNCTLNLLSKEG-KRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVNS 439 (1330)
T ss_pred chhHHHHHHHcCcEEEEecCCc-eEEEehHHhhhcccccccCCCCceEEEEEecCCCCccceeEEEEcCCccccHHHhhh
Confidence 9999999999999999999999 9999999988 6899999999999999999987555677899999999999999999
Q ss_pred EEEEEEe-cCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHH
Q 000775 395 GMRVYLE-EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTL 473 (1291)
Q Consensus 395 A~~~~~~-~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~ 473 (1291)
|+.++++ +++ +|+++||+||||+++|+|+.++|++|.||+|+++++++|.+++.+++.|+.+++|+|++||++|+.
T Consensus 440 A~~v~l~~~~~---~i~~aria~Ggvap~p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~ 516 (1330)
T TIGR02969 440 GMRVFFGEGDG---IIRELSISYGGVGPTTICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLII 516 (1330)
T ss_pred eEEEEEEcCCC---EEeEEEEEEEcCcCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Confidence 9999996 456 899999999999999999999999999999999999999999999998877778999999999999
Q ss_pred HHHHHHHHHHHhhhcC-CCCCccCCCCccccccccccCCCCCCcccccccC--CC--CccCCcccccCcccccceeeecc
Q 000775 474 SFFFKFFLWVSHQMEG-KNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITK--HG--TSVGSPEVHLSSRLQVTGEAEYT 548 (1291)
Q Consensus 474 ~l~~r~l~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~r~~~~~~q~~~~~~--~~--~~iGk~~~r~d~~~kvtG~a~Y~ 548 (1291)
+||+|||+++..++.. .....+.+++.+.|+.+.++||+++|+|.|+... +. ++|||+++|+|++.||||+++|+
T Consensus 517 ~ll~kf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~a~Y~ 596 (1330)
T TIGR02969 517 SFLFKFYLEVSQILKRMDPGHYPSLADKYESALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGEAIYC 596 (1330)
T ss_pred HHHHHHHHHHhhhhccccccccccCChhhccccccccCCCCccccceecccccccccCcCCCCCcChhhHhhcccccccc
Confidence 9999999999988742 1111224667788999999999999999998422 22 88999999999999999999999
Q ss_pred ccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCCCCccccccccCeEeecCCeEEEEEE
Q 000775 549 DDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVA 628 (1291)
Q Consensus 549 ~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~~~~d~~~la~~~V~y~GqpVa~VvA 628 (1291)
+|++.+|||||+++||||++||+|++||+|+|++||||++|+|++|+|+.|.++ ++++|++++|+|+|||||+|||
T Consensus 597 ~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp~~~~~~----~~~~la~~~Vr~~Gqpva~VvA 672 (1330)
T TIGR02969 597 DDMPAVDQELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITAEHLQDANTFG----TEKLLATDKVHCVGQLVCAVIA 672 (1330)
T ss_pred CCCCCCCCCEEEEEEecCCCceEEEeeeHHHHhcCCCeEEEEeHHHCCCCCCCC----CeeecCCCeEEEcCCeEEEEEE
Confidence 999844899999999999999999999999999999999999999999655443 7889999999999999999999
Q ss_pred CCHHHHHHhccccceeEeec-CCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCCceEEEEEEEeCcccccCCCCCe
Q 000775 629 ETHEEAKLASRKVQVEYEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHS 707 (1291)
Q Consensus 629 ~t~~~A~~Aa~lV~V~ye~l-p~v~~~~~A~~~~~~~~~~~~~~~~Gdv~~af~~~~a~~vve~~~~~~~~~H~~mEp~~ 707 (1291)
+|+++|++|+++|+|+||+| |+++|+++|+++++++. ....+.+||++++| ++|+++||++|++++|+|+||||++
T Consensus 673 et~~~A~~Aa~~V~VeYe~l~~~v~d~~~Al~~~a~~~-~~~~~~~Gdv~~af--~~a~~vve~~y~~~~~~H~~mEp~~ 749 (1330)
T TIGR02969 673 DSEVQAKQAAKHVKIVYRDLEPLILTIEEAIQHKSFFE-PERKLEYGNVDEAF--KVVDQILEGEIHMGGQEHFYMETQS 749 (1330)
T ss_pred CCHHHHHHHhcCCEEEEecCCCCcCCHHHHhcCCCEec-ccccccCCchhhhh--ccCCEEEEEEEEECCEeecccCCCE
Confidence 99999999999999999999 56799999999887554 33446889999999 9999999999999999999999999
Q ss_pred eEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEec
Q 000775 708 SVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLD 787 (1291)
Q Consensus 708 a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~s 787 (1291)
|+|+|+.++|+|+||+|||+|+.+|..||++||||.+||||+++++|||||+|.+....+++.||++|+++||||||+||
T Consensus 750 ~~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aA~aA~~~gRPVk~~~s 829 (1330)
T TIGR02969 750 MLVVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITAFAANKHGRAVRCTLE 829 (1330)
T ss_pred EEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccHHHHHHHHHHHHhCCCEEEEec
Confidence 99999844578999999999999999999999999999999999999999999986434578999999999999999999
Q ss_pred hHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCC
Q 000775 788 RDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSN 867 (1291)
Q Consensus 788 R~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ 867 (1291)
|+|+|+.+++||++.++||+|+|+||+|++++++++.|+|+|.+.+..++.+++.++.++|+|||++++++.|+||+||+
T Consensus 830 R~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ 909 (1330)
T TIGR02969 830 RGEDMLITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPNLRCRGWACRTNLPSN 909 (1330)
T ss_pred HHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCcEEEEEEEEECCCCCC
Confidence 99999999999999999999999999999999999999999998887777888888999999999999999999999999
Q ss_pred CccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhhHhHhhhh
Q 000775 868 TAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFN 947 (1291)
Q Consensus 868 ~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn 947 (1291)
|||||||.+|++|++|++||++|++|||||+|||++|++++|+.++++++++++.+++||+++++.++|++|+++++.||
T Consensus 910 ~a~RG~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~~p~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~ 989 (1330)
T TIGR02969 910 TAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQTPYKQEINAKNLFQCWRECMAKSSYSERKVAVEKFN 989 (1330)
T ss_pred CccCCCchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCcccCCCCcccCCCcHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred ccCcccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCC
Q 000775 948 LNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETST 1027 (1291)
Q Consensus 948 ~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT 1027 (1291)
+.++|++||+++++..|+++++..+.+++++.|+|+.||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||
T Consensus 990 ~~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT 1069 (1330)
T TIGR02969 990 AENYWKKRGLAVIPLKFPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTST 1069 (1330)
T ss_pred ccCCCeEEEEEEEEEEeccccccCCCCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCC
Confidence 88999999999999999987754445678999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCC
Q 000775 1028 DKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGN 1107 (1291)
Q Consensus 1028 ~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1107 (1291)
+.+|++++|+|||+|+++|+||++||++|++||.+++++.+..+|.+++..++..+++|++.++|..+...+++....+.
T Consensus 1070 ~~~p~~~gt~gSr~t~~~G~Av~~A~~~l~~rl~~~aa~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1149 (1330)
T TIGR02969 1070 ETVPNTNASGGSVVADLNGLAVKDACQTLLKRLEPIISKNPQGTWKDWAQTAFDQSISLSAVGYFRGYESNINWEKGEGH 1149 (1330)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHhhccCCCceEEEEEecCCcccccccCcCCC
Confidence 99999999999999999999999999999999999988777789999997777667889999988666555666554455
Q ss_pred CcccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCcccc
Q 000775 1108 PFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYT 1187 (1291)
Q Consensus 1108 ~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~ 1187 (1291)
++.||+||||++|||||++||+++|+|+++++|||++|||.+++|||||||+||||++|+||+.|| ++|+++|
T Consensus 1150 ~~~~~~~ga~~aeVEVD~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~vqGiG~al~Ee~~yd-------~~G~~lt 1222 (1330)
T TIGR02969 1150 PFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFIQGMGLYTIEELSYS-------PQGILYS 1222 (1330)
T ss_pred CccccceeeEEEEEEEecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHHHHHHHHHcceeEEC-------CCCCCCC
Confidence 667899999999999999999999999999999999999999999999999999999999999998 6899999
Q ss_pred CCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHH
Q 000775 1188 CGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPER 1267 (1291)
Q Consensus 1188 ~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~ 1267 (1291)
.+|++|++|++.|||.+|+|.++++.+++.+|||+||+||+|+++++++++||+|||++|+++.|++++|++++|+|||+
T Consensus 1223 ~~~~dY~iPt~~DiP~~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~A~g~~g~~~~~~~~~P~Tper 1302 (1330)
T TIGR02969 1223 RGPNQYKIPAICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAARQERGLSGPWKLTSPLTPEK 1302 (1330)
T ss_pred CCcccccCCchhhcCCCEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHHHHhhcCCCcCccCCCCCCHHH
Confidence 99999999999999965999999854788999999999999999877899999999999998888878889999999999
Q ss_pred HHHHhcccccccccC--CCCCCCCCC
Q 000775 1268 IRMACLDEFTAPFIN--SEYRPKLSV 1291 (1291)
Q Consensus 1268 i~~a~~~~~~~~~~~--~~~~~~~~~ 1291 (1291)
||++|.+++++.+.. +++..+|++
T Consensus 1303 v~~al~~~~~~~~~~~~~~~~~~~~~ 1328 (1330)
T TIGR02969 1303 IRMACEDKFTKMIPRDEPGSYVPWNV 1328 (1330)
T ss_pred HHHHhhhhHHHhhhccCccCCcccee
Confidence 999999999887544 556667764
No 3
>KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.9e-256 Score=2289.24 Aligned_cols=1183 Identities=56% Similarity=0.911 Sum_probs=1096.9
Q ss_pred CccccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHh
Q 000775 1 MHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESL 79 (1291)
Q Consensus 1 ~~~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~-~~~~~~~i~~~~ 79 (1291)
+|.+|||||+|+++++|++|||+||||++..++||||++|++.||+||||||||||||||+||++.+ .| |.+||+++|
T Consensus 62 ~~~avNsCLt~l~s~~g~~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~~~~~-T~~eie~a~ 140 (1257)
T KOG0430|consen 62 RHWAVNSCLTLLNSVHGLEVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNSKNSP-TMEEIENAF 140 (1257)
T ss_pred EEeehhhhhhhcccccceEEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhCCCCC-CHHHHHHhh
Confidence 5789999999999999999999999998888999999999999999999999999999999999988 67 999999999
Q ss_pred hCcccccCCChhHHHHHHHHHhcccccccccccccccCCccccCCCCCCCCCCCCCCCCCCccccccccCCCcccccccc
Q 000775 80 AGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSE 159 (1291)
Q Consensus 80 ~gnlCrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 159 (1291)
+||||||||||||+||+++|+.+.+ ||...- ...|.+ .++ .+..
T Consensus 141 ~GNLCRCTGYRPIldA~kSFa~d~~----------------~~~~g~-~~~~~~-----------------~~~--~~~~ 184 (1257)
T KOG0430|consen 141 GGNLCRCTGYRPILDAMKSFAVDSD----------------ICGPGC-DGFSIA-----------------EEK--DIED 184 (1257)
T ss_pred ccceeeecCCchHHHHHhhhccCCC----------------ccccCc-cccccc-----------------ccc--cccc
Confidence 9999999999999999999997642 342210 011210 012 5556
Q ss_pred CCCCcCCcc-ccCCchhhhhcCCCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEe
Q 000775 160 IDGSTYTEK-ELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLIS 238 (1291)
Q Consensus 160 ~~~~~~~~~-~~~~p~~l~~~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lId 238 (1291)
.+ ++|||+ +++|||+|+... ....+ +.++.+|++|.||+|++++|+++|++++|+|+|..+++++.+. .+++||
T Consensus 185 ~~-~~~dp~~~~i~~pe~~~~~-~~~~~-~~~~~~W~~P~sl~eL~~~~~~~~~~~Lv~GNT~~gv~~r~~~--~~~~Id 259 (1257)
T KOG0430|consen 185 LS-PPYDPKKELIFPPELLKRK-KTTLL-GNDGIRWYWPVSLEELFELKANKPDAKLVAGNTAHGVYRRSPD--YQKFID 259 (1257)
T ss_pred cc-CCCCCccCcccChHHhccc-ccccc-CCCCcEEeCcccHHHHHHHHhcCcceEEEeccccceEEeccCC--Ccceec
Confidence 67 999999 999999998662 22444 6679999999999999999999999999999999999988887 789999
Q ss_pred CCCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCC---
Q 000775 239 VTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP--- 315 (1291)
Q Consensus 239 l~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp--- 315 (1291)
+++|+||+.++.++++|+|||++||+++++.|++.+. .+. .++|+.+++|+++||++||||.|||||||+.++|
T Consensus 260 ~~~v~el~~~~~~~~gi~lGa~~sls~~~~~l~~~~~-~~~--~~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~ 336 (1257)
T KOG0430|consen 260 VSGVPELKALNVDDNGLELGAALSLSETMELLRKLVK-RPG--FEYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPE 336 (1257)
T ss_pred hhcCchhhhcccCCCceEEcccccHHHHHHHHHHHHh-CcH--HHHHHHHHHHHHHhcccceeccccccceeEeccCCCC
Confidence 9999999988888999999999999999999987776 332 3799999999999999999999999999999998
Q ss_pred -CCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchhhcce
Q 000775 316 -ISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNA 394 (1291)
Q Consensus 316 -~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~ 394 (1291)
+||++++|+|+||+|++.+..+...++.+.+| +++.|.+.|||.+|+||...+ +|.+||+++|+++|+|+||+
T Consensus 337 f~SDl~~~l~a~~a~v~~~~~~~~~~~~~l~~y----~~~~l~~~~illsv~ip~~~~--~f~~~k~a~R~e~a~a~vNa 410 (1257)
T KOG0430|consen 337 FPSDLFILLEALDAKVTILNNSGDLEKVFLEEY----LGSSLGAKEILLSVVLPASRK--YFESYKQAPRRENAIAYVNA 410 (1257)
T ss_pred CchhHHHHHHhhccEEEEeecCCccceeeHhhh----hccccCcceEEEEEEccCcHH--HHHHHHhcccccchhhhhhH
Confidence 89999999999999999988774555555555 467799999999999999865 88899999999999999999
Q ss_pred EEEEEEecCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHH
Q 000775 395 GMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLS 474 (1291)
Q Consensus 395 A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~ 474 (1291)
+|+..++ +|+++||+|||++|..+++.++|+.|.||.|+++.|++|...+.+++.|+. |+++.+||+.||.+
T Consensus 411 ~fl~e~~------~V~~~~i~fGg~~p~~i~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~--p~~~~~yR~~La~s 482 (1257)
T KOG0430|consen 411 AFLAEVG------KVSSARICFGGIAPDFIHAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDE--PGGMPEYRKKLALG 482 (1257)
T ss_pred Hhhhccc------eeeeeeEeecCcCcchhhhhhHHHHhhcccccHHHHHHHHHhhhhhccCCC--CCCcHHHHHHHHHH
Confidence 8876543 799999999999999999999999999999999999999999999998666 78999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCccCCCCccccccccccCCCCCCcccccccCCCCccCCcccccCcccccceeeeccccCCCC
Q 000775 475 FFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMP 554 (1291)
Q Consensus 475 l~~r~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~r~~~~~~q~~~~~~~~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~ 554 (1291)
+|+|||+.+.+..+. .....++.....+|++++.|.|.+..+..+||+|+.++.+..|+||||.|+|||+.+
T Consensus 483 fffKF~l~~~~~~~~--------~~~~~~g~~~~~~~~ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~ 554 (1257)
T KOG0430|consen 483 FFFKFLLKVAHKVKN--------GNKFITGGSLLARPLLSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTP 554 (1257)
T ss_pred HHHHHHHHHhhhccc--------cCCccCCCccccccccccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCC
Confidence 999999999987741 133445566677999999999988877999999999999999999999999999999
Q ss_pred CCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCC--CCC--CCccccccccCeEeecCCeEEEEEECC
Q 000775 555 PNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP--VVADEELFASEVVTCVGQVIGVVVAET 630 (1291)
Q Consensus 555 pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~--~~~--~~~d~~~la~~~V~y~GqpVa~VvA~t 630 (1291)
++.||++||.|+++||+|+|||+|+|+++|||+++++++|+|+.|. ++. ...|+++||+++|+|+|||||+|||+|
T Consensus 555 ~n~lh~aFV~St~p~A~I~sID~seAl~~~GVv~~~~akDiPg~n~~~i~~~~~~~de~lFA~~~v~~~GQ~ig~ivAdt 634 (1257)
T KOG0430|consen 555 PNTLHAAFVLSTKPHAKILSIDASEALKLPGVVAFFSAKDIPGNNMKNIGNMFFPEDEELFATDVVTCVGQPIGVIVADT 634 (1257)
T ss_pred CCeeEEEEEEcccCCcEEeeecchhhcCCCceEEEEecccCCCCCccccccccCCCccceeecceeEEcCcEEEEEEeCC
Confidence 9999999999999999999999999999999999999999999883 332 257899999999999999999999999
Q ss_pred HHHHHHhccccceeEeec-CCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCCceEEEEEEEeCcccccCCCCCeeE
Q 000775 631 HEEAKLASRKVQVEYEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSV 709 (1291)
Q Consensus 631 ~~~A~~Aa~lV~V~ye~l-p~v~~~~~A~~~~~~~~~~~~~~~~Gdv~~af~~~~a~~vve~~~~~~~~~H~~mEp~~a~ 709 (1291)
.++|++||++|+|+|+++ |++++++||++..++++ ....+..+++.+.|..+++|.++|++++++.|+|||||||+++
T Consensus 635 ~~~A~rAA~lVkv~Y~~l~p~I~t~e~Ai~~~s~~~-~~~~~~~~~~~~~~~~~~~d~i~~Ge~~mG~QeHFYmEtQttl 713 (1257)
T KOG0430|consen 635 HELAKRAAKLVKVEYEELPPPILPSEDAVKDKSLSE-TEPRLRKGDVGKSFQLEECDKILEGELDMGGQEHFYMEPQTTL 713 (1257)
T ss_pred HHHHHHhhhceEEEeccCCCceecHHHHHhhhcccC-CCccccccCccccccccccceeEEEEEEecceeEEEeccceeE
Confidence 999999999999999999 67999999999988766 5566777777666633567999999999999999999999999
Q ss_pred EEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechH
Q 000775 710 VWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRD 789 (1291)
Q Consensus 710 a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~ 789 (1291)
|+|+ || +|.||+|||||..+|..||++||||.|||+|+++|+|||||||.++..++|++|||+|+|+|||||++++|+
T Consensus 714 ~vP~-e~-el~v~~STQ~~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~RPvr~~l~r~ 791 (1257)
T KOG0430|consen 714 VVPF-EG-ELQVYSSTQWPDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLNRPVRFVLSRE 791 (1257)
T ss_pred Eeec-CC-eEEEEEcCcCcHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhCCCEEEEecch
Confidence 9998 34 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCc
Q 000775 790 IDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTA 869 (1291)
Q Consensus 790 e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a 869 (1291)
+||.++|+|||++.+||+||++||||+|+++++|.|+|++.|+|+.++ +++.+++++|++||+|+++++|+||.|++||
T Consensus 792 ~dM~itG~Rhp~~~~Ykvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~-~~~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa 870 (1257)
T KOG0430|consen 792 SDMIITGKRHPFHGKYKVGFKSDGKILALDLEFYENAGWSKDESPSVL-RAMFHSDNVYEIGDVRFDGYVCKTNLPSNTA 870 (1257)
T ss_pred hhhhhcCCccceEEeEEEEEccCCeEEEEehhhhhccCCCcCcchHHH-hhhhhhhheecccceeeeeeEEecCCCCcch
Confidence 999999999999999999999999999999999999999999999888 8999999999999999999999999999999
Q ss_pred cCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhhHhHhhhhcc
Q 000775 870 FRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLN 949 (1291)
Q Consensus 870 ~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~ 949 (1291)
|||||.||++++.|++|.++|.++|+||.|+|++|++++|+.+++++.++.+.+.+||+++.+.++|++|+.++++||++
T Consensus 871 ~Rg~G~pQG~~i~E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~~~~~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~ 950 (1257)
T KOG0430|consen 871 FRGPGSPQGILITENIIERIAFELGKDPEEVRKINFYVEGSLTYYHGELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKE 950 (1257)
T ss_pred hcCCCChhhHHHHHHHHHHHHHHhCCCHHHHhhhhhhhcccccccCCCcccCcHHHHHHHHHHhchHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCC
Q 000775 950 NRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1029 (1291)
Q Consensus 950 ~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~ 1029 (1291)
|+||||||+++|++||+++.. ++.|+|+||.||||.|.|||+|||||++||++|+||+.||||++.|++.++||+.
T Consensus 951 N~WrKRGi~~vp~~f~i~~~~----~~~a~V~Iy~DGSV~v~hgGiEmGQGL~TK~~Qvaa~~l~ip~~~v~v~~tsT~~ 1026 (1257)
T KOG0430|consen 951 NRWKKRGLAMVPMKFGISFTG----QAPALVHIYTDGTVVVTHGGIEMGQGLNTKVAQVAAYALGIPLSSVFVSETSTDK 1026 (1257)
T ss_pred ChhhhcCceEeeeecceeccC----CCceEEEEEcCCeEEEEECcEEcccchhHHHHHHHHHHhCCcccceEEeeccccc
Confidence 999999999999999999864 3789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCc
Q 000775 1030 VPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPF 1109 (1291)
Q Consensus 1030 ~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1109 (1291)
+||+++|+||.++++.|.||+.||++|.+||+|++.+++..+|+|++.+||.++++|+++.+|+ +.|+++
T Consensus 1027 v~na~~Ta~S~~Sd~~g~AV~~~C~~l~~RL~Pv~~k~~~~tw~~~i~~AY~q~V~LsAs~~~~----------~~g~~~ 1096 (1257)
T KOG0430|consen 1027 VPNASPTAASVSSDMYGAAVLDACETINARLEPVKSKHNFNTWEELIQAAYGQSINLSASDWYK----------PEGDMF 1096 (1257)
T ss_pred ccCCCccccccccccccHHHHHHHHHHHHhhhhhhhhcCCccHHHHHHHHhhCccceeeecccc----------CCCCcc
Confidence 9999999999999999999999999999999999999888999999999999999999996664 347889
Q ss_pred ccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCC
Q 000775 1110 RYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCG 1189 (1291)
Q Consensus 1110 ~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~ 1189 (1291)
.|++||++++|||||++||+++|+|+|+++|||.+|||++|+|||||+|+||+|++++||+.|| ++|.++|++
T Consensus 1097 ~Y~~yG~a~sEVEID~LTG~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~-------~~G~l~t~g 1169 (1257)
T KOG0430|consen 1097 PYLTYGAAASEVEIDTLTGDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYD-------PEGSLLTNG 1169 (1257)
T ss_pred cceeccceeEEEEEEEecCcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeC-------CCceEeecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 469999999
Q ss_pred CCCCCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000775 1190 PGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1269 (1291)
Q Consensus 1190 ~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~ 1269 (1291)
+|+||||+++|||.+|+|.++...||+.+.|+||++||||+++|++|++||++||.+||+ .||.+..|+|||+|+
T Consensus 1170 t~~YKiP~~~dIP~~FrV~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~-----~~f~L~~PaTpe~i~ 1244 (1257)
T KOG0430|consen 1170 TWTYKIPGAKDIPKDFRVELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARK-----DWFRLEAPATPERIR 1244 (1257)
T ss_pred CCcccCCCcccCchheEeeeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhh-----ccccCCCCCCHHHHH
Confidence 999999999999999999999556999999999999999999999999999999999986 289999999999999
Q ss_pred HHhcccccccc
Q 000775 1270 MACLDEFTAPF 1280 (1291)
Q Consensus 1270 ~a~~~~~~~~~ 1280 (1291)
++|++++++.+
T Consensus 1245 ~~c~~~~~~~~ 1255 (1257)
T KOG0430|consen 1245 LACGDEFSEFK 1255 (1257)
T ss_pred Hhhcchhhhhc
Confidence 99999998764
No 4
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=1.2e-247 Score=2408.80 Aligned_cols=1194 Identities=33% Similarity=0.548 Sum_probs=1067.7
Q ss_pred ccccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcC-----CCC------C
Q 000775 2 HCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSS-----QTP------P 70 (1291)
Q Consensus 2 ~~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~-----~~~------~ 70 (1291)
+++|||||+|++++||++|+|||||++..+.|||||++|+++|++|||||||||||++|+||+++ ++| +
T Consensus 67 ~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~ 146 (1344)
T PLN00192 67 DFTVSSCLTLLCSVNGCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKL 146 (1344)
T ss_pred CcEEehHHHHHHHhCCCEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCC
Confidence 78999999999999999999999998546789999999999999999999999999999999663 232 3
Q ss_pred CHHHHHHHhhCcccccCCChhHHHHHHHHHhcccccccccccccccCC-ccccCCCCCCCCCCCCCCCCCCccccccccC
Q 000775 71 TEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEG-EFVCPSTGKPCSCGMKNVSNADTCEKSVACG 149 (1291)
Q Consensus 71 ~~~~i~~~~~gnlCrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~c~~~~~~~~c~~~~~~~~~~c~~~~~~~ 149 (1291)
|++||+++|+|||||||||+||++|+++++.+.+ +++. .+||++++ .| . .
T Consensus 147 ~~~~i~~~l~gnlCRCtgY~~i~~a~~~~~~~~~----------~~~~~~~~~~~~~---~~-----------~-~---- 197 (1344)
T PLN00192 147 TVVEAEKAVSGNLCRCTGYRPIVDACKSFAADVD----------IEDLGLNSFWKKG---ES-----------E-E---- 197 (1344)
T ss_pred CHHHHHHHhcCCceeCCCCHHHHHHHHHHHhhcc----------chhcccccccccC---Cc-----------c-h----
Confidence 8999999999999999999999999999987531 2222 23565421 01 0 0
Q ss_pred CCccccccccCCCCcCCcc-cc-CCchhhhhc--CCCCcccccCCCeEEEecCCHHHHHHHHhcCC----CcEEEEccch
Q 000775 150 KTYEPVSYSEIDGSTYTEK-EL-IFPPELLLR--KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTE 221 (1291)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~-~~-~~p~~l~~~--~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~----~a~lvAGgTd 221 (1291)
...++|++|+++ ++ +| |+|+.. ....+.+ . ++++|++|+||+||+++|+++| ++++||||||
T Consensus 198 -------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~P~sl~ea~~ll~~~~~~~~~a~lvAGgTd 267 (1344)
T PLN00192 198 -------AKLSKLPPYNHSDHICTF-PEFLKKEIKSSLLLD-S-SRYRWYTPVSVEELQSLLESNNFDGVSVKLVVGNTG 267 (1344)
T ss_pred -------hhhhhcccCCCccccccC-hhhhhcccCccceec-C-CCceEECcCCHHHHHHHHHhCCCCCCCeEEEEeCCc
Confidence 012478899988 77 77 666643 2233334 3 5789999999999999999995 8999999999
Q ss_pred hhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCccee
Q 000775 222 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIK 301 (1291)
Q Consensus 222 l~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIR 301 (1291)
++++ +. ...|+++|||++|+||+.|+.++++|+|||+|||+++++.+... ..+. ..||.|.+++++|||+|||
T Consensus 268 l~~~-k~-~~~p~~lIdi~~I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~--~~~~---~~~p~L~~~~~~vAs~qIR 340 (1344)
T PLN00192 268 TGYY-KD-EELYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREE--SKSE---YVFKKIADHMEKIASRFVR 340 (1344)
T ss_pred ceee-ec-cCCCCeEEEcCCChhhhcEEecCCEEEEeecCcHHHHHHHHHhh--cccc---chHHHHHHHHHHhcChhhc
Confidence 9884 43 66789999999999999999999999999999999999876443 1111 1689999999999999999
Q ss_pred cceeecccccccCC---CCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEecCCC------C
Q 000775 302 NVASVGGNICTASP---ISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTR------P 372 (1291)
Q Consensus 302 N~aTiGGNI~~asp---~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~~~t~L~~~Eii~~I~iP~~~------~ 372 (1291)
|+|||||||||||| +||++|+|+||||+|+|.+.+| +|+||++|||.+ +.|++||||++|+||.+. .
T Consensus 341 N~aTlGGNI~~Asp~~p~sD~~p~LlAl~A~v~l~s~~g-~R~vpl~dFf~~---~~l~~~Eil~~I~iP~~~~~~~~~~ 416 (1344)
T PLN00192 341 NTGSIGGNLVMAQRKQFPSDIATILLAAGSTVNIQNASK-REKLTLEEFLER---PPLDSKSLLLSVEIPSWTSSSGSDT 416 (1344)
T ss_pred cceechhhhcccCCCCCchhHHHHHHHhCcEEEEEeCCc-eEEEeHHHHhcc---CccCCcceEEEEEccCCccccccCc
Confidence 99999999999974 6999999999999999999999 999999999985 569999999999999653 3
Q ss_pred CcceEEEEEeecC-ccchhhcceEEEEEEe-----cCCcceEEEEEEEEEecCCC-ccccHHHHHHHHcCCCCCHHHHHH
Q 000775 373 FEFVKEFKQAHRR-DDDIALVNAGMRVYLE-----EKDEEWVVSDALLVYGGVAP-LSLSAKKTKTFIVGKSWSQELLQN 445 (1291)
Q Consensus 373 ~~~~~~~K~~~R~-~~dia~v~~A~~~~~~-----~~~~~~~i~~~ria~Ggv~~-~p~ra~~~E~~L~Gk~l~~~~l~~ 445 (1291)
..+|.+||+++|+ ++|||+||+||.++++ +++ +|+++||+||||++ +|+|+.++|++|.||+|+++++++
T Consensus 417 ~~~f~~yk~~~Rr~~~diA~V~aA~~v~~~~~~~~~~~---~i~~aria~Ggvap~~P~ra~~~E~~L~Gk~~~~~~l~~ 493 (1344)
T PLN00192 417 KLLFETYRAAPRPLGNALPYLNAAFLAEVSQDASSGGI---VVNDCRLAFGAYGTKHAIRARKVEEFLTGKVLSDSVLYE 493 (1344)
T ss_pred ccceeeeeecccccccchhhheeeEEEEEEecccCCCC---eEeEEEEEEecCCCCceecHHHHHHHhcCCCCCHHHHHH
Confidence 4667889999997 8899999999999996 444 79999999999999 699999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccCCCCc-----------cccccccccCCCCC
Q 000775 446 ALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPST-----------HLSAMQSFHRPSII 514 (1291)
Q Consensus 446 a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~~~~~~~~~~~~~~~-----------~~s~~~~~~r~~~~ 514 (1291)
|++++.+++.|.++ ++|++||++|+.+|++|||.++++++.. .+++. ..|+...++||+++
T Consensus 494 A~~~l~~~~~p~~~--~~s~eYRr~la~~l~~r~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1344)
T PLN00192 494 AVRLLKGIVVPEDG--TSHPEYRSSLAVGFLFDFLSPLIESNAK------SSNGWLDGGSNTKQNPDQHDDVKKPTLLLS 565 (1344)
T ss_pred HHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhccc------cccccccccccccccccccccccccCCCCC
Confidence 99999999987664 4799999999999999999999987621 12222 36888899999999
Q ss_pred CcccccccCCCCccCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCC
Q 000775 515 GNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAED 594 (1291)
Q Consensus 515 ~~q~~~~~~~~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~D 594 (1291)
|.|.|++.+++++||||++|+|+..|+||+|+|++|++.+|||||++|||||++||+|++||+++|+++|||++|+|++|
T Consensus 566 ~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~aV~t~~D 645 (1344)
T PLN00192 566 SKQQVEENNEYHPVGEPIKKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITFKD 645 (1344)
T ss_pred cceeeecccccCcCCCCCcChhhHhhcccceecccccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCCCcEEEEchHH
Confidence 99999988999999999999999999999999999999558999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCC--CCccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEee--c-CCCCCHHHHHhcCCCCCC--
Q 000775 595 VQ-GDNRIGP--VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEE--L-PAILSIQEAIDAKSFHPN-- 666 (1291)
Q Consensus 595 ip-~~n~~~~--~~~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~--l-p~v~~~~~A~~~~~~~~~-- 666 (1291)
+| +.+.++. ...|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+ + |+++|+++|++++++++.
T Consensus 646 ip~~~~~~g~~~~~~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeYe~~~l~p~v~~i~~Al~~~s~~~~~~ 725 (1344)
T PLN00192 646 IPKGGQNIGSKTIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTENLEPPILTVEDAVKRSSLFEVPP 725 (1344)
T ss_pred cCcccccCCCCCCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEEecCCCCCcccCHHHHhcCCCCcccCh
Confidence 98 3333443 24589999999999999999999999999999999999999997 4 999999999998876431
Q ss_pred CcceeecCCcccccccCCCceEE-EEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCc
Q 000775 667 TERCFRKGDVDICFQSGQCDKII-EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSK 745 (1291)
Q Consensus 667 ~~~~~~~Gdv~~af~~~~a~~vv-e~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~k 745 (1291)
.......||++++| ++|+++| |++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++|
T Consensus 726 ~~~~~~~GD~~~af--~~a~~vv~e~~~~~~~q~H~~mEp~~~vA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lgip~~~ 802 (1344)
T PLN00192 726 FLYPKPVGDISKGM--AEADHKILSAEIKLGSQYYFYMETQTALALPD-EDNCIVVYSSTQCPEYVHSVIARCLGIPEHN 802 (1344)
T ss_pred hhcccccCCHHHHh--ccCCeEEEEEEEEECCEeeeeccCceEEEEEc-CCCCEEEEECCCCHHHHHHHHHHHhCCChHH
Confidence 12234679999999 9999976 999999999999999999999998 5788999999999999999999999999999
Q ss_pred EEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEec
Q 000775 746 VVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNN 825 (1291)
Q Consensus 746 V~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d 825 (1291)
|||+++++|||||+|.++...+++.||++|+++||||||+|||+|+|+++++|||+.++||+|+|+||+|++++++++.|
T Consensus 803 VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d 882 (1344)
T PLN00192 803 VRVITRRVGGGFGGKAVKSMPVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALHLDILIN 882 (1344)
T ss_pred EEEEecccccCCCccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEe
Confidence 99999999999999987667788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhc
Q 000775 826 AGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINF 905 (1291)
Q Consensus 826 ~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl 905 (1291)
+|+|.+.+.. +...+.+..++|+|||++++++.|+||++|+|||||||.+|++|++|++||++|++|||||+|||++||
T Consensus 883 ~Ga~~~~~~~-~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~e~R~~Nl 961 (1344)
T PLN00192 883 AGISPDISPI-MPRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTLSMDVDSVRKINL 961 (1344)
T ss_pred cccCCCcchH-HHHHHhhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHhcC
Confidence 9999877643 344455677999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcc-ccCcc---ccCCCHHHHHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEEEE
Q 000775 906 QGEGSIL-HYGQQ---LQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVH 981 (1291)
Q Consensus 906 ~~~g~~~-~~g~~---~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~ 981 (1291)
+++++.. +++++ ++++.+++||+++++.++|++|++++++||+.|+|+|||+++++..|++++ +++.+.|+
T Consensus 962 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig~~~~~~~~~~-----~~~~a~v~ 1036 (1344)
T PLN00192 962 HTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGISRVPIVHEVML-----RPTPGKVS 1036 (1344)
T ss_pred CCccccccCCCCcccccCCCcHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEEEEEEEEeccc-----cCCceEEE
Confidence 9765432 45554 368899999999999999999999888999999999999999999998753 34689999
Q ss_pred EecCCeEEEEEcCccCCcchHHHHHHHHHHHhCC--------CcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHH
Q 000775 982 VYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNI--------PLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDAC 1053 (1291)
Q Consensus 982 i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgi--------p~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac 1053 (1291)
|+.||+|+|.||++|||||++|+++||||++||| |+|+|+|..+||+.+||+++|+|||+|+++|.||++||
T Consensus 1037 i~~DGsv~v~~G~~e~GQG~~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~t~gSr~t~~~G~Av~~Ac 1116 (1344)
T PLN00192 1037 ILSDGSIAVEVGGIEIGQGLWTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTAGSTTSESSCEAVRLCC 1116 (1344)
T ss_pred EeCCceEEEEECCCCCCCCHHHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCCCchhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcC----CCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCc
Q 000775 1054 EQIKARMEPIASKH----NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGD 1129 (1291)
Q Consensus 1054 ~~L~~rl~~~~~~~----~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~ 1129 (1291)
++|++||++++++. +.++|++++..+|..+++|+++++|.++. ..+.||+||++++|||||++||+
T Consensus 1117 ~~l~~rl~~~a~~~~~~~~~~~~~~~~~~a~~~~~~L~a~~~~~~~~----------~~~~y~~~ga~~~eVEVD~~TG~ 1186 (1344)
T PLN00192 1117 VILVERLKPIKERLQEQMGSVTWDMLISQAYMQSVNLSASSYYTPDP----------SSMEYLNYGAAVSEVEVDLLTGE 1186 (1344)
T ss_pred HHHHHHHHHHHHHHhccCCCcCHHHHHHHhcCCCCCeEEEEEECCCC----------CCccccceeEEEEEEEEecCCCc
Confidence 99999999998764 67999999998877677899999985321 01357899999999999999999
Q ss_pred EEEEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEE
Q 000775 1130 FHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSL 1209 (1291)
Q Consensus 1130 v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~ 1209 (1291)
++|+|+++++|||++|||++++|||||||+|||||+|+||+.|| ++|+++|++|++||||++.|||.+|+|.+
T Consensus 1187 v~vlr~~~~~D~G~~INP~i~~GQIeGg~vqGiG~al~Ee~~yd-------~~G~llt~~~~dY~iPt~~DiP~~~~v~~ 1259 (1344)
T PLN00192 1187 TTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTN-------SDGLVVTDGTWTYKIPTVDTIPKQFNVEI 1259 (1344)
T ss_pred EEEEEEEEEEecCcccCHHHHHHHHHHHHHHHHhHHhceeEEEC-------CCCCCCCCChhhcCCCcccccCCceEEEE
Confidence 99999999999999999999999999999999999999999999 68999999999999999999996699999
Q ss_pred ecCCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHh---cC----CCcccCCCCCCCHHHHHHHhcccccccccC
Q 000775 1210 LKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARAD---AG----HTGWFPLDNPATPERIRMACLDEFTAPFIN 1282 (1291)
Q Consensus 1210 ~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~---~G----~~~~~~~~~P~Tpe~i~~a~~~~~~~~~~~ 1282 (1291)
+++..+|.+|||+||+||+|++++++|++||+|||++||+| .| ...+|.++.|+|||+|+++|++++++++..
T Consensus 1260 ~e~~~~~~~p~gaKgvGE~~~~~~~~v~~Ai~~Ai~~Ar~~~~~~g~~~~~~~~~~l~~pat~e~i~~~~~~~~~~~~~~ 1339 (1344)
T PLN00192 1260 LNSGHHKKRVLSSKASGEPPLLLAASVHCATRAAIREARKQLLSWGGIDGSDSTFQLPVPATMPVVKELCGLDVVERYLE 1339 (1344)
T ss_pred EeCCCCCCCCCccccCccCcccccHHHHHHHHHHHHHHHhhhcccCCcccCCCceecCCCCChHHHHHhcCChHHHHhhh
Confidence 99723688999999999999999999999999999999999 78 777899999999999999999999888643
No 5
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=2.8e-167 Score=1593.48 Aligned_cols=703 Identities=26% Similarity=0.353 Sum_probs=624.6
Q ss_pred CCccCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCC------C
Q 000775 525 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG------D 598 (1291)
Q Consensus 525 ~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~------~ 598 (1291)
++.|||+++|+|++.||||+++|++|+.+ |||||++++|||++||+|++||+|+|++||||++|+|.+|+|. .
T Consensus 169 ~~~VGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahArI~sID~s~A~a~pGV~~Vvt~~Dvp~~~~~~~~ 247 (956)
T PRK09800 169 LEVIGKHYPKTDAAKMVQAKPCYVEDRVT-ADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGG 247 (956)
T ss_pred cccCCCCCCCcChHhhCcccccccccCCC-CCCEEEEEeecCCCcEEEeeeEHHHHHhCCCeEEEEcHHHCCcccccccC
Confidence 34589999999999999999999999987 8999999999999999999999999999999999999999983 1
Q ss_pred CCCCCCCccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCCC--CCC----------
Q 000775 599 NRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPN---------- 666 (1291)
Q Consensus 599 n~~~~~~~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~~--~~~---------- 666 (1291)
+.++....++++|++++|||+|||||+|||+|+++|++|+++|+|+||+||+++|+++|++++++ |+.
T Consensus 248 ~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Veye~Lp~v~d~~~Al~~~a~~vh~~~~~~~~~~~~ 327 (956)
T PRK09800 248 QSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPD 327 (956)
T ss_pred cCCCCCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEEEeCCccCCHHHHhcCCCceeccccccccccccc
Confidence 22222122344466999999999999999999999999999999999999999999999988763 321
Q ss_pred --------------------------C-----cceeecCCcccccccCCCceEEEEEEEeCcccccCCCCCeeEEEEecC
Q 000775 667 --------------------------T-----ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDH 715 (1291)
Q Consensus 667 --------------------------~-----~~~~~~Gdv~~af~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e 715 (1291)
. ......||++++| ++|++|||++|++++|+|+||||++|+|+|+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~a~~vve~~y~~~~~~H~~mEp~~aiA~~d-- 403 (956)
T PRK09800 328 TLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGF--ADADVIIERTYNSTQAQQCPTETHICFTRMD-- 403 (956)
T ss_pred ccccccccccccccccccccccccCCCCceeeeccccCCCHHHHH--hhCCEEEEEEEEeCCcccccCCCceEEEEEe--
Confidence 0 1223679999999 9999999999999999999999999999998
Q ss_pred CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhc
Q 000775 716 GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMIS 795 (1291)
Q Consensus 716 ~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~ 795 (1291)
+|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. ....||++|+++||||||+|||+|+|.++
T Consensus 404 ~~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~--~e~~aA~aA~~~grPVkl~~tReE~~~~~ 481 (956)
T PRK09800 404 GDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDIL--LEEVCAWATCVTGRPVLFRYTREEEFIAN 481 (956)
T ss_pred CCeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCccccc--HHHHHHHHHHHhCCCEEEEeeHHHHhhCc
Confidence 4689999999999999999999999999999999999999999998643 44668999999999999999999999999
Q ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCCh
Q 000775 796 GQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGG 875 (1291)
Q Consensus 796 ~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~ 875 (1291)
++||++.+++|+|+|+||+|++++++++.|+|+|.+++..+...+..+..++|+|||++++.+.|+||++|+|+|||||.
T Consensus 482 ~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~ 561 (956)
T PRK09800 482 TSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGA 561 (956)
T ss_pred CCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHhhcCcCcccceEEEEEEEEECCCCCCCCcCCCCc
Confidence 99999999999999999999999999999999998877777766666777999999999999999999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcccc-----------Ccc-ccCCCHHHHHHHHHHhCCChhhhHhH
Q 000775 876 PQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHY-----------GQQ-LQHCTLFPLWNELKLSCDFLNARKEV 943 (1291)
Q Consensus 876 ~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~-----------g~~-~~~~~l~~~l~~~~~~~~~~~r~~~~ 943 (1291)
+|+.|++|++||++|++|||||+|||++|++++|+.+++ +.+ +.++.+++||++++++++|.++++
T Consensus 562 pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~L~~~~e~~~w~~~~~-- 639 (956)
T PRK09800 562 PKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKP-- 639 (956)
T ss_pred chHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccCccccCCCHHHHHHHHHHhcCcchhhh--
Confidence 999999999999999999999999999999998887543 223 557889999999999999987532
Q ss_pred hhhhccCccc-ccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEE
Q 000775 944 DNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFV 1022 (1291)
Q Consensus 944 ~~fn~~~~~~-~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v 1022 (1291)
.+++|+ |+|+++.+..+|.+. .+.+.+.|+|++||+|+|.+|++|||||++|+++||||+.||||+|+|+|
T Consensus 640 ----~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dGsv~v~~g~~e~GqG~~T~~~QiaAe~LGip~d~V~v 711 (956)
T PRK09800 640 ----QNGDWHIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHV 711 (956)
T ss_pred ----hcCCCeeEEEEEEEEEcccCCC----CCCceEEEEECCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCceeEEE
Confidence 235554 777776654444331 24678999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc--------------------CCCCCHHHHHHHhhcc
Q 000775 1023 SETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK--------------------HNFNSFAELASACYVQ 1082 (1291)
Q Consensus 1023 ~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~--------------------~~~~~~~~~~~~a~~~ 1082 (1291)
..+||+.+|++++|+|||+|+++|+||++||++||+||+..+++ ...++|.+++..++..
T Consensus 712 ~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 791 (956)
T PRK09800 712 ISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETG 791 (956)
T ss_pred EeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999876532 0136799998776643
Q ss_pred --CcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHH
Q 000775 1083 --RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQ 1160 (1291)
Q Consensus 1083 --~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~q 1160 (1291)
..++.+.++|..|. .+|+|+|+++|||||++||+++|+|+++++|||++|||.+++||||||++|
T Consensus 792 ~~~~~l~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkvl~~~~~~D~G~vINP~~v~gQieGgi~q 858 (956)
T PRK09800 792 TGFGSLVGTGSYITPD-------------FAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLR 858 (956)
T ss_pred CCCCCeEEEEEecCCC-------------CCcceEEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHH
Confidence 33577777775432 257899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHH
Q 000775 1161 GLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAI 1240 (1291)
Q Consensus 1161 GlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai 1240 (1291)
|||++|+||+.|| ++|+++|.+|++|++|++.|+|.+|++.++|+ ++|.+|||+||+||+++++ +++||
T Consensus 859 GiG~AL~Ee~~~d-------~~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~-~~~~~p~GaKgvGE~~~~~---~a~AI 927 (956)
T PRK09800 859 AIGHSMSEEIIYD-------AEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPS-DDKVGPFGAKSISEIGVNG---AAPAI 927 (956)
T ss_pred HHHHHHhCCcEEC-------CCCcCCCCCcccCCCCChhhCCCceEEEEEcC-CCCCCCCCCcccCCCcccc---hHHHH
Confidence 9999999999998 68999999999999999999995599999997 9999999999999999976 45688
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000775 1241 KDAISAARADAGHTGWFPLDNPATPERIRMACLD 1274 (1291)
Q Consensus 1241 ~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1274 (1291)
+|||++|+ |++ ++++|+|||+|++++.+
T Consensus 928 anAI~~A~---G~r---~~~lP~tpe~vl~al~~ 955 (956)
T PRK09800 928 ATAIHDAC---GIW---LREWHFTPEKILTALEK 955 (956)
T ss_pred HHHHHHHh---CcC---cccCCCCHHHHHHHHhh
Confidence 88888887 876 68999999999998863
No 6
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=7.9e-166 Score=1582.38 Aligned_cols=702 Identities=26% Similarity=0.366 Sum_probs=620.6
Q ss_pred CCccCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCC------C
Q 000775 525 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG------D 598 (1291)
Q Consensus 525 ~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~------~ 598 (1291)
+++|||+++|+|++.||||+++|++|+.+ |||||++++|||++||+|++||+|+|++||||++|+|.+|+|. .
T Consensus 165 ~~~iGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~v~rSP~ahArI~sID~s~A~a~pGV~~Vvt~~D~p~~~~~~~~ 243 (951)
T TIGR03313 165 LTIIGKNCPKIDAAKMVQAKPCYVEDRVP-ADACVIKMLRSPHPHAWITHLDVSKAEALPGVVHVITHLNCPDIYYTPGG 243 (951)
T ss_pred cccCCCCCcCcChHhhCccCccccccCCC-CCCEEEEEEecCCCcEEEEeeEHHHHHhCCCeEEEEeHHHCCccccCCCC
Confidence 34589999999999999999999999987 8999999999999999999999999999999999999999983 1
Q ss_pred CCCCCCCccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCCC--CCCC---------
Q 000775 599 NRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT--------- 667 (1291)
Q Consensus 599 n~~~~~~~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~~--~~~~--------- 667 (1291)
+.++....++++|++++|||+||||++|||+|+|+|++|+++|+|+||+||+++|+++|++++++ |+..
T Consensus 244 ~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Veye~Lp~v~d~~~Al~~~ap~ih~~~~~~~~~~~~ 323 (951)
T TIGR03313 244 QSAPEPSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEYDVLTPVMSIDEAMAAEAPIVHDEPIVYGAGAPD 323 (951)
T ss_pred ccCCCCCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEEEeCCccCCHHHHhcCCCCeeccccccccccccc
Confidence 22221122345568999999999999999999999999999999999999999999999988773 3210
Q ss_pred --------------------------------cceeecCCcccccccCCCceEEEEEEEeCcccccCCCCCeeEEEEecC
Q 000775 668 --------------------------------ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDH 715 (1291)
Q Consensus 668 --------------------------------~~~~~~Gdv~~af~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e 715 (1291)
......||++++| ++|+++||++|++++|+|+||||++|+|+|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~A~~vve~~y~~~~~~H~~mEp~~aiA~~d-- 399 (951)
T TIGR03313 324 DLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGF--AEADVIIERTYESTQAQQCPTETHICFTYMD-- 399 (951)
T ss_pred cccccccccccccccccccccccccCCCceeeeccccCCCHHHHH--hcCCEEEEEEEEECCEeeecCCCceEEEEEc--
Confidence 1124679999999 9999999999999999999999999999997
Q ss_pred CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhc
Q 000775 716 GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMIS 795 (1291)
Q Consensus 716 ~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~ 795 (1291)
+|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. ....||++|+++||||||+|||+|+|+++
T Consensus 400 ~~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~--~e~~aA~aA~~~GrPVkl~~tReE~~~~~ 477 (951)
T TIGR03313 400 GERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDIL--LEEVCAWATWVTGRPVYFRYTREEEFICN 477 (951)
T ss_pred CCeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCccccc--HHHHHHHHHHHhCCCEEEEeeHHHHhhcc
Confidence 4689999999999999999999999999999999999999999998643 34568999999999999999999999999
Q ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCCh
Q 000775 796 GQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGG 875 (1291)
Q Consensus 796 ~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~ 875 (1291)
++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+.........++|+|||++++.+.++||++|.|+|||||.
T Consensus 478 ~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~Rg~G~ 557 (951)
T TIGR03313 478 TSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVDFRVTTYYSNICPTGAYQGYGA 557 (951)
T ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCcCccCCeEEEEEEEEECCCCCCCCcCCCCc
Confidence 99999999999999999999999999999999998776666544445566899999999999999999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccc-----------cCcc-ccCCCHHHHHHHHHHhCCChhhhHhH
Q 000775 876 PQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILH-----------YGQQ-LQHCTLFPLWNELKLSCDFLNARKEV 943 (1291)
Q Consensus 876 ~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~-----------~g~~-~~~~~l~~~l~~~~~~~~~~~r~~~~ 943 (1291)
+|+.|++|++||++|++|||||+|||+||++++|+.++ ++.+ ++++.+.+||++++++++|+++++
T Consensus 558 ~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~l~~~~~~~~w~~~~~-- 635 (951)
T TIGR03313 558 PKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTSVPKAASCALEEILRQGRELIEWDSPKQ-- 635 (951)
T ss_pred ccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccccccCCCcHHHHHHHHHHhcCccchhh--
Confidence 99999999999999999999999999999999988763 2223 457789999999999999987542
Q ss_pred hhhhccCccc-ccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEE
Q 000775 944 DNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFV 1022 (1291)
Q Consensus 944 ~~fn~~~~~~-~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v 1022 (1291)
.+++|+ |+|+++....+|.+. .+.+.+.|+|+.||+|+|.+|++|||||+.|+++||+|+.||+|+|+|+|
T Consensus 636 ----~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~QiaAe~LGvp~d~V~v 707 (951)
T TIGR03313 636 ----AKGDWKIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHV 707 (951)
T ss_pred ----hccCceeeeEEEEEEecccCCC----CCCccEEEEEcCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCHHhEEE
Confidence 235664 777766554444331 24678999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc--------------------CCCCCHHHHHHHhhcc
Q 000775 1023 SETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK--------------------HNFNSFAELASACYVQ 1082 (1291)
Q Consensus 1023 ~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~--------------------~~~~~~~~~~~~a~~~ 1082 (1291)
..+||+.+|++++|+|||+|+++|+||++||++||+||...+++ ...++|++++..++..
T Consensus 708 ~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 787 (951)
T TIGR03313 708 ISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEMLGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETG 787 (951)
T ss_pred EeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999876532 1126799998766532
Q ss_pred --CcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHH
Q 000775 1083 --RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQ 1160 (1291)
Q Consensus 1083 --~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~q 1160 (1291)
..++...+.|..+. .+|+|+|+++|||||++||+++|+|+++++|||++|||.+++||||||++|
T Consensus 788 ~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkv~r~~~~~D~G~~INP~~v~gQieGg~~q 854 (951)
T TIGR03313 788 TGFGQLVGTGSYITSE-------------FAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATMR 854 (951)
T ss_pred CCCCCeEEEEEecCCC-------------CCccceeEEEEEEEECCCCcEEEEEEEEEEECCcccCHHHHHHHHHHHHHH
Confidence 23466676664321 257899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHH
Q 000775 1161 GLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAI 1240 (1291)
Q Consensus 1161 GlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai 1240 (1291)
|||++|+|++.|| ++|+++|.+|++|++|++.|+|.+|++.++++ ++|.+|||+||+||+++++ +++||
T Consensus 855 GiG~AL~Ee~~~d-------~~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~-~~~~~p~GaKGiGE~~~~~---~apAI 923 (951)
T TIGR03313 855 AIGHSMTEEIVYD-------DNGIPLTRDLKSYGAPKIGDIPRDFRAVLVPS-DDKVGPYGAKSISEIGVNG---AAPAI 923 (951)
T ss_pred HHHHHHhCCcEEC-------CCCcCCCCChhhCCCCChHhCCCceEEEEEcC-CCCCCCCCCcccCCCcccc---hHHHH
Confidence 9999999999998 68999999999999999999994499999997 8999999999999999976 45688
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000775 1241 KDAISAARADAGHTGWFPLDNPATPERIRMACL 1273 (1291)
Q Consensus 1241 ~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~ 1273 (1291)
+|||++|+ |++ ++++|+|||+||++++
T Consensus 924 anAI~dA~---G~r---~~~lP~tPe~vl~al~ 950 (951)
T TIGR03313 924 ATAIHDAC---GVW---LRDWHFTPEKILKGLN 950 (951)
T ss_pred HHHHHHHh---Ccc---cccCCCCHHHHHHHhh
Confidence 88888886 886 6899999999999875
No 7
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=8.6e-160 Score=1519.70 Aligned_cols=672 Identities=28% Similarity=0.389 Sum_probs=591.0
Q ss_pred cCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCCCCcc
Q 000775 528 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVAD 607 (1291)
Q Consensus 528 iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~~~~d 607 (1291)
|||+++|+|+++||||+++|++|+.+ |||||++++|||++||+|++||+|+|++||||++|+|++|+|+.+.++....+
T Consensus 162 iG~~~~R~d~~~kvtG~~~Y~~Di~~-pgmL~a~~vrSp~ahA~I~~ID~s~A~a~PGV~aVvt~~Dip~~~~~g~~~~~ 240 (848)
T TIGR03311 162 LGENFPRVDAVPKVLGEGVYVDDMQI-EGMLYGSALRSKYPRALVKSIDITVALKHPGVVAVLTAKDIPGNRKIGHIFKD 240 (848)
T ss_pred CCCccCCcChhhhCcccccccccCCC-CCCEEEEEEeCCCCCEEEEeeEHHHHHhCCCcEEEEeHHHCCCccCCCCCCCC
Confidence 79999999999999999999999998 89999999999999999999999999999999999999999975555654455
Q ss_pred cc-ccc-cCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCC--CCC--C--CcceeecCCcccc
Q 000775 608 EE-LFA-SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHP--N--TERCFRKGDVDIC 679 (1291)
Q Consensus 608 ~~-~la-~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~--~~~--~--~~~~~~~Gdv~~a 679 (1291)
++ +|+ +++|||+|||||+|+|+|+++|++|+++|+|+||++|+++|+++|+++++ +|+ | ....+.+||++++
T Consensus 241 ~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Veye~lp~v~d~~~A~~~~a~~i~~~~Nv~~~~~~~~Gdv~~a 320 (848)
T TIGR03311 241 WPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDYEELPPLTSPEEALAEGAPAIHPKGNILSEEHVVRGDAEEA 320 (848)
T ss_pred ccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEEecCCCcCCHHHHhcCCCCeECCCCCCcceeeecCCCHHHH
Confidence 55 344 58999999999999999999999999999999999999999999998876 343 1 1234678999999
Q ss_pred cccCCCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000775 680 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 759 (1291)
Q Consensus 680 f~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGg 759 (1291)
| ++|++|||++|++++|+|+||||++|+|+|+ +|+|+||+|||+|+.+|..+|++||||++||||+.+++|||||+
T Consensus 321 f--~~A~~vve~~y~~~~~~h~~mEp~~~vA~~~--~~~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~ 396 (848)
T TIGR03311 321 L--ENSAYVVTNHYSTPFTEHAFLEPESALAVPE--GDGVIIYTSTQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGG 396 (848)
T ss_pred h--hcCCeEEEEEEEECCEeeeecCCceEEEEEe--CCeEEEEECCcCHHHHHHHHHHHhCCChHHEEEEeCCCCCcCCc
Confidence 9 9999999999999999999999999999997 56799999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000775 760 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 839 (1291)
Q Consensus 760 K~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~ 839 (1291)
|.... .+..||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|++++++++.|+|+|.+++..++.+
T Consensus 397 K~~~~--~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~ 474 (848)
T TIGR03311 397 KEDMS--VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEAGNLTAMKADIIADTGAYASLGGPVLQR 474 (848)
T ss_pred ccccc--HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEEEEEEECCCCcEEEEEEEEEEccccCCCccHHHHHH
Confidence 99753 4568999999999999999999999999999999999999999999999999999999999999887778888
Q ss_pred HhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCcccc
Q 000775 840 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 919 (1291)
Q Consensus 840 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 919 (1291)
++.++.++|+|||++++++.|+||++|.++|||||.+|++|++|++||++|++|||||+|||++|++++|+.+++|+.++
T Consensus 475 ~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~E~R~rN~~~~gd~~~~g~~~~ 554 (848)
T TIGR03311 475 ACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMECNLNLLAEKVGLSPWEIRFKNAVEPGDTLPNGQVVS 554 (848)
T ss_pred HHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCceeC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -CCCHHHHHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCC
Q 000775 920 -HCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMG 998 (1291)
Q Consensus 920 -~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~G 998 (1291)
+..+++||+++++. |++ ++++|+++.....|+++. ..+.+.+.+.++ ||+|+|.+|++|||
T Consensus 555 ~~~~~~~~l~~~~~~--~~~-------------~~~~G~~~~~~~~g~~~~--~~~~~~~~~~~~-DGsv~v~~g~~e~G 616 (848)
T TIGR03311 555 EGTAIKETLLAVKEV--YEK-------------SPCAGIACAFKNSGVGVG--IPDTGRCNLAVE-DGKVHIRTSAACIG 616 (848)
T ss_pred CCchHHHHHHHHHHH--hhh-------------ccCCeEEEEEEEeccccC--CCCcceEEEEEc-CCEEEEEECCCCcC
Confidence 55699999999874 431 235788776555555431 123456777777 99999999999999
Q ss_pred cchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Q 000775 999 QGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASA 1078 (1291)
Q Consensus 999 qG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~ 1078 (1291)
||++|+++||+||.||||+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+.. .|.++...
T Consensus 617 QG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~~~G~Av~~Aa~~l~~~l~~~-------~~~~l~~~ 689 (848)
T TIGR03311 617 QGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSLFTGEATRRAAAKLKEALRGR-------TLAELEGE 689 (848)
T ss_pred cCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhc-------CHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999742 34444111
Q ss_pred hhccC-----cceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhh
Q 000775 1079 CYVQR-----IDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQ 1153 (1291)
Q Consensus 1079 a~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQ 1153 (1291)
.+... .++...+.| ..++..|+|+++++|| | +|| +|+|+++++|||++|||.+++||
T Consensus 690 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~eV--d-~tG--~v~r~~~v~D~G~vINP~~veGQ 751 (848)
T TIGR03311 690 EFYGEYHSITDPLNSDKEN-------------PVSHVGYGYATQVVIL--D-DAG--KVEKVVAAYDVGRAINPLNLEGQ 751 (848)
T ss_pred EEeeccccccCcceeeccC-------------CCCccccceEEEEEEE--C-CCC--eEEEEEEEEeCCccCCHHHHHHH
Confidence 10000 001111100 0112234555555555 6 899 67899999999999999999999
Q ss_pred hhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccch
Q 000775 1154 IEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLA 1233 (1291)
Q Consensus 1154 ieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a 1233 (1291)
||||++||||++|+|++.|| +|++++ +|++|++|++.|+|+ |++.++|+ ++|.+|||+||+||+++++
T Consensus 752 ieGG~~qGlG~AL~Ee~~~d--------~G~~~~-~~~dY~iPt~~D~P~-i~v~~ve~-~~~~~p~GaKGvGE~~~~~- 819 (848)
T TIGR03311 752 IEGGIVMGLGYALTEDFPLR--------EGIPTA-KFGTLGLFRSTQVPE-IETHLIEK-NGTPLAYGAKGVGELATIP- 819 (848)
T ss_pred HHHHHHHHHHHHhcCcEEec--------CCeecC-ChhhccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCCCCcccc-
Confidence 99999999999999999997 599886 599999999999995 99999997 9999999999999999975
Q ss_pred hhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000775 1234 SSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1269 (1291)
Q Consensus 1234 ~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~ 1269 (1291)
+++||+|||++|+ |++ ++++|+|||+|+
T Consensus 820 --~~~AIanAV~~A~---G~r---~~~lP~~p~~v~ 847 (848)
T TIGR03311 820 --TAPAVAGAYYRFD---GKF---RLSLPLENTPYT 847 (848)
T ss_pred --hHHHHHHHHHHhH---CcC---cccCCCCccccc
Confidence 5679999999987 886 799999999986
No 8
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=6.2e-161 Score=1346.05 Aligned_cols=735 Identities=47% Similarity=0.728 Sum_probs=705.7
Q ss_pred CccCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCCCC
Q 000775 526 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 605 (1291)
Q Consensus 526 ~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~~~ 605 (1291)
..||.+.++-.+..+|+|+|.|+|||+.|+|.||+++-.|+++||+|+++|.+++++.|||+.|+|++|+||.|..++..
T Consensus 17 ~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvPGenDisp~~ 96 (781)
T COG4631 17 GGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVPGENDISPVK 96 (781)
T ss_pred CcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCCCCCCCCccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCC
Q 000775 606 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 685 (1291)
Q Consensus 606 ~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~~~~~~~~~~~~Gdv~~af~~~~a 685 (1291)
+|+|+|++++|.|+||||-+|+|+|.++|++|+++.+||||+||+++|+.+|++.+.+.. .....++||.+.+| +.|
T Consensus 97 hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieYe~lp~~~di~~a~a~~~~v~-~p~~l~rGD~~a~~--~~A 173 (781)
T COG4631 97 HDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEYEDLPPVTDIDEAIAAGRLVT-PPLTLKRGDAAAAL--AAA 173 (781)
T ss_pred CCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhcccccCCccCCHHHHhhcccccC-Cchhhcccchhhhh--hhC
Confidence 999999999999999999999999999999999999999999999999999999886544 45678999999999 999
Q ss_pred ceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcch
Q 000775 686 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 765 (1291)
Q Consensus 686 ~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~ 765 (1291)
++.++++++++.|+|||+|.|.++|.|+ |||.++||||||.|..+|..+|.+||+|.|.|.|.++|+|||||||++...
T Consensus 174 p~r~~G~~~iGGQehFYLEgqia~a~p~-Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFGGKEtQ~~ 252 (781)
T COG4631 174 PHRLQGEMRIGGQEHFYLEGQIALAVPG-EDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKETQAN 252 (781)
T ss_pred chhheeeEEEcCeeeEEEeeeeeEeccC-CCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcCcccccch
Confidence 9999999999999999999999999998 788999999999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccC
Q 000775 766 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSD 845 (1291)
Q Consensus 766 ~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 845 (1291)
.+++.||++|+|++||||+..+|.|||+++||||++...|++|||+||+|++++..+..++|++.|+|.++.++++.|++
T Consensus 253 ~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~dRAlfH~D 332 (781)
T COG4631 253 QFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVTDRALFHAD 332 (781)
T ss_pred HHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccchhhheeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCC--ccccCccccCCCH
Q 000775 846 NVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGS--ILHYGQQLQHCTL 923 (1291)
Q Consensus 846 ~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~--~~~~g~~~~~~~l 923 (1291)
+.|.+|++.+.++.++||+.++|+|||||.||+++++|.+||++|..||+||+|+|++|++.++. .|||+|.+++..+
T Consensus 333 NaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n~TpYhQ~Vednii 412 (781)
T COG4631 333 NAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQTVEDNII 412 (781)
T ss_pred cceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCccCccccchHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999998765 7999999999999
Q ss_pred HHHHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHH
Q 000775 924 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHT 1003 (1291)
Q Consensus 924 ~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T 1003 (1291)
.++|+++..+++|..|++++..||+..+..||||++.|.+||++|+..+.||++|+|+||.||||.++||++|||||++|
T Consensus 413 ~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~DGSi~lNHGGTEMGQGL~t 492 (781)
T COG4631 413 ARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNHGGTEMGQGLYT 492 (781)
T ss_pred HHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEEEEeccCeEEEcCCCcccccchhH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc-----------------
Q 000775 1004 KVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK----------------- 1066 (1291)
Q Consensus 1004 ~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~----------------- 1066 (1291)
|++||+|++|+|++++|+|..++|+++||++.|.+|+|++++|+|+++||+++|+||-.|++.
T Consensus 493 KvaQVvA~~fqvd~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fAA~~~~V~~~~v~F~~n~vr 572 (781)
T COG4631 493 KVAQVVAEEFQVDIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEHWGVPEEDVAFLPNRVR 572 (781)
T ss_pred HHHHHHHHHhCcccceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCCHHHeEecCCeeE
Confidence 999999999999999999999999999999999999999999999999999999999999864
Q ss_pred --CCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcc
Q 000775 1067 --HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYS 1144 (1291)
Q Consensus 1067 --~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~ 1144 (1291)
...++|++++++||..+++|++.|+|++|++.||-..+.|.||.||+|||.|+||+||++||+.+++|.++.||+|++
T Consensus 573 ig~~~~~F~~lv~~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFaYGAacSEV~vDtlTGey~~~R~DiLHDvG~S 652 (781)
T COG4631 573 IGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRS 652 (781)
T ss_pred EcceecCHHHHHHHHhheeeeeeccccccCCccccchhhcCCCceEEEeecceeeeEEEecccceEEEEeehhhhhhhhh
Confidence 124899999999999999999999999999988888999999999999999999999999999999999999999999
Q ss_pred cCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCC-CCCCCCcc
Q 000775 1145 LNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPN-VKAIHSSK 1223 (1291)
Q Consensus 1145 iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~-~~~~~gaK 1223 (1291)
|||+++.|||||||+||+||.++||+.|| +.|+|.|..+++||||.+.|.|..|+|.+.+.+.+ ...+++||
T Consensus 653 LNpaiDlGQiEGgFvQGmGWLTtEeL~wd-------~kGRlrThapSTYKiP~~sdrP~~f~V~L~~~~~n~e~ti~rSK 725 (781)
T COG4631 653 LNPAIDLGQIEGGFVQGMGWLTTEELWWD-------EKGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENAEPTIHRSK 725 (781)
T ss_pred cccccccccccchhcccccccchhhheec-------cCCCeeecCCccccCcccccCchheeeehhcccccccccccccc
Confidence 99999999999999999999999999999 79999999999999999999999999999997433 45789999
Q ss_pred cCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000775 1224 AVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1274 (1291)
Q Consensus 1224 gvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1274 (1291)
.+||||++++.||..||++|+.+- .|.++ ...++.|+|||+|++++..
T Consensus 726 AVGEPPlmL~iSV~~Al~~AvAsv-aD~r~--~p~ldaPATpErVlmave~ 773 (781)
T COG4631 726 AVGEPPLMLGISVLEALSDAVASV-ADYRV--CPRLDAPATPERVLMAVER 773 (781)
T ss_pred ccCCCCcchhHHHHHHHHHHHHHh-cccCc--CCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999765 34333 3568999999999999854
No 9
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=2.6e-154 Score=1463.19 Aligned_cols=734 Identities=47% Similarity=0.751 Sum_probs=673.9
Q ss_pred cCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCCCCcc
Q 000775 528 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVAD 607 (1291)
Q Consensus 528 iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~~~~d 607 (1291)
|||+++|+|+..|+||+++|++|+..+|||||++++|||++||+|++||+|+|+++|||++|+|++|+|+.|.++....+
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p~~~~~g~~~~~ 80 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIPGENDISPIIHD 80 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCCCCCCCCCCCCC
Confidence 69999999999999999999999963489999999999999999999999999999999999999999976666666678
Q ss_pred ccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCCce
Q 000775 608 EELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDK 687 (1291)
Q Consensus 608 ~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~~~~~~~~~~~~Gdv~~af~~~~a~~ 687 (1291)
+|+|++++|||+|||||+|||+|+++|++|+++|+|+||+||+++|+++|+++++...+....+..||++++| ++|++
T Consensus 81 ~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~ye~lp~v~d~~~Al~~~a~~~~~~~~~~~Gd~~~af--~~a~~ 158 (758)
T TIGR02965 81 DPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEYEELPAVLDIEEALAAGSRFVTPPLTLERGDAEAAL--AAAPH 158 (758)
T ss_pred ceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEEEcCCccCCHHHHhcCCCCcccCcccccCCCHHHHH--hhCCE
Confidence 9999999999999999999999999999999999999999999999999998876321113345889999999 99999
Q ss_pred EEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHH
Q 000775 688 IIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFI 767 (1291)
Q Consensus 688 vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~ 767 (1291)
+||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+...++
T Consensus 159 vve~~y~~~~~~h~~mEp~~~vA~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~ 237 (758)
T TIGR02965 159 RLSGEMRIGGQEHFYLEGQIALAVPG-EDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKETQANLF 237 (758)
T ss_pred EEEEEEEECCEeEEecCCceEEEEEc-CCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccccccchH
Confidence 99999999999999999999999998 56789999999999999999999999999999999999999999999764455
Q ss_pred HHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCC
Q 000775 768 AAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNV 847 (1291)
Q Consensus 768 a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~ 847 (1291)
++.||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|++++++++.|+|+|.+.+..++........++
T Consensus 238 ~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~ 317 (758)
T TIGR02965 238 ACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRALFHADNA 317 (758)
T ss_pred HHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHHHhcCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999877666777777788999
Q ss_pred cccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcc--ccCccccCCCHHH
Q 000775 848 YEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL--HYGQQLQHCTLFP 925 (1291)
Q Consensus 848 Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~--~~g~~~~~~~l~~ 925 (1291)
|+|||++++++.|+||++|+|+|||||.+|+.|++|++||++|++|||||+|||++|++++|+.+ ++|+.++++.+++
T Consensus 318 Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~~~~~~g~~~~s~~~~~ 397 (758)
T TIGR02965 318 YFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDERNVTPYHQTVEDNIIHE 397 (758)
T ss_pred ccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCCCcCCCceeccCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888766 6799999999999
Q ss_pred HHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHH
Q 000775 926 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 1005 (1291)
Q Consensus 926 ~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~ 1005 (1291)
||+++++.++|++|+++.++||..++|++||+++++..||.++.....+++++.|+|++||+|+|.+|.+|||||++|++
T Consensus 398 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~l 477 (758)
T TIGR02965 398 IIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTEMGQGLNTKV 477 (758)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEeCCCcEEEEECCCCCCCCHHHHH
Confidence 99999999999998887777888888889999999988887664322346789999999999999999999999999999
Q ss_pred HHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc-------------------
Q 000775 1006 AQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK------------------- 1066 (1291)
Q Consensus 1006 ~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~------------------- 1066 (1291)
+||+||+||||+|+|+|..+||+.+|++++|+|||+|.+.|.||++||++||++|++++++
T Consensus 478 aQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l~~~~~~l~~~~g~v~~~ 557 (758)
T TIGR02965 478 AQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKWQVPAEDVRFAPNHVRVG 557 (758)
T ss_pred HHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999988653
Q ss_pred CCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccC
Q 000775 1067 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLN 1146 (1291)
Q Consensus 1067 ~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iN 1146 (1291)
...++|.+++..++....+|.++++|..+...++...+.+.++.+|+||||++|||||++||+++|+|+++++|||++||
T Consensus 558 ~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iN 637 (758)
T TIGR02965 558 EQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLN 637 (758)
T ss_pred CCccCHHHHHHHHhhcCCCcEEEEEEcCCCccccccccCCCCcceeeeeEEEEEEEEecCCCcEEEEEEEEEEecCCcCC
Confidence 12478999998887666679999998766544444444455555789999999999999999999999999999999999
Q ss_pred ccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecC-CCCCCCCCCcccC
Q 000775 1147 PAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKG-HPNVKAIHSSKAV 1225 (1291)
Q Consensus 1147 P~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~-~~~~~~~~gaKgv 1225 (1291)
|.+++||||||++||||++|+|++.|| ++|+++|.||++|++|++.|||++|++.++|+ .+++.+|||+||+
T Consensus 638 P~~~~GQi~Gg~~qGiG~aL~E~~~~d-------~~G~~l~~~~~dY~iPta~DiP~~~~~~~~e~~~~~~~~p~GaKGv 710 (758)
T TIGR02965 638 PAIDIGQVEGGFVQGMGWLTTEELVWD-------EKGRLRTHAPSTYKIPAASDRPKDFNVRLFEWSENREDTIHRSKAV 710 (758)
T ss_pred HHHhhhhhhhhhhhhhhHhhccceEEC-------CCcCCcCCCCcCcCCCChhhCCCccEEEEecCCCCCCCCCcCCccc
Confidence 999999999999999999999999998 68999999999999999999995599999994 2456899999999
Q ss_pred CccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000775 1226 GEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1274 (1291)
Q Consensus 1226 GE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1274 (1291)
||++++++++|++||+|||++|+ |++.|+.+++|+|||+||++|++
T Consensus 711 GE~~~~~~aav~~AI~nAi~~a~---g~~~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 711 GEPPLMLGISVLFAISDAVASVA---DYRVCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred CccchhhHHHHHHHHHHHHHHhh---ccCCCCCCCCCCCHHHHHHHHHh
Confidence 99999987889999999999997 88766679999999999999864
No 10
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=5.7e-147 Score=1391.99 Aligned_cols=709 Identities=25% Similarity=0.332 Sum_probs=636.2
Q ss_pred ccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCCCCcccccc
Q 000775 532 EVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELF 611 (1291)
Q Consensus 532 ~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~~~~d~~~l 611 (1291)
++|+|+..||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|..........|+|+|
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p~~~g~~~~~~d~~~l 79 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADLAA-PGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPVPYGVLPIAENEYPL 79 (746)
T ss_pred CcCcchHhhCccccccccCCCC-CCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCCcccCCCCCCCCCccC
Confidence 4799999999999999999998 899999999999999999999999999999999999999998521111223589999
Q ss_pred ccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCCC--CCCC------cceeecCCcccccccC
Q 000775 612 ASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT------ERCFRKGDVDICFQSG 683 (1291)
Q Consensus 612 a~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~~--~~~~------~~~~~~Gdv~~af~~~ 683 (1291)
++++|||+|||||+|||+|+++|++|+++|+|+||+||+++|+++|+++++. |++. ...+.+||++++| +
T Consensus 80 a~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~~a~--~ 157 (746)
T TIGR03194 80 ARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEELPAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVAAAF--A 157 (746)
T ss_pred CCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEEecCCCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHhHHh--c
Confidence 9999999999999999999999999999999999999999999999988763 4321 1345789999999 9
Q ss_pred CCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCc
Q 000775 684 QCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETR 763 (1291)
Q Consensus 684 ~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~ 763 (1291)
+|+++||++|++++|+|+||||++|+|+|++++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|...
T Consensus 158 ~a~~vve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG~K~~~ 237 (746)
T TIGR03194 158 EADLIREKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGARVEP 237 (746)
T ss_pred cCCEEEEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCcccccccc
Confidence 99999999999999999999999999999844678999999999999999999999999999999999999999999875
Q ss_pred chHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhc
Q 000775 764 SAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFH 843 (1291)
Q Consensus 764 ~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~ 843 (1291)
.++++.||++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|++++++++.|+|+|.++++.++......
T Consensus 238 -~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~ 316 (746)
T TIGR03194 238 -LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTILYAGAL 316 (746)
T ss_pred -chHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHHHHHHh
Confidence 3467899999999999999999999999999999999999999999999999999999999999998887777777778
Q ss_pred cCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCH
Q 000775 844 SDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTL 923 (1291)
Q Consensus 844 ~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l 923 (1291)
+.++|+|||++++++.|+||++|+|+|||||.+|+.|++|++||++|++|||||+|||++|+++.|+.+++|+.++++++
T Consensus 317 ~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~~~~~~g~~~~s~~~ 396 (746)
T TIGR03194 317 LHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMSYGL 396 (746)
T ss_pred cCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCCCCCCCCceecCCCH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeecccccc----ccCCceeEEEEEecCCeEEEEEcCccCCc
Q 000775 924 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTL----KLMNQAGALVHVYTDGTVLVTHGGVEMGQ 999 (1291)
Q Consensus 924 ~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~----~~~~~~~a~V~i~~DGsV~V~~g~~e~Gq 999 (1291)
++||++++++++|++|++.. +++||+++++..++.+... ...+++++.|+++.||+|+|.+|++||||
T Consensus 397 ~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~Gq 468 (746)
T TIGR03194 397 PECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGITLLTGAADIGQ 468 (746)
T ss_pred HHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCceEEEEEcCCccEEEEEcCCCCCC
Confidence 99999999999998765421 2356666666665433211 11346889999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc-------------
Q 000775 1000 GLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK------------- 1066 (1291)
Q Consensus 1000 G~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~------------- 1066 (1291)
|++|+++||+||.||+|+|+|+|..+||+.+|++++|+|||+|++.|.||++||++||+||++++++
T Consensus 469 G~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~ 548 (746)
T TIGR03194 469 GSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLVAAAAKKLDAREEDIECAG 548 (746)
T ss_pred CHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999988653
Q ss_pred ---------CCCCCHHHHHHHhhccCcceeEEEEeecCCccccccC--CCC-CCcccccEEEEEEEEeeeCCCCcEEEEE
Q 000775 1067 ---------HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWIT--GKG-NPFRYFTYGAAFAEVEIDTLTGDFHTRM 1134 (1291)
Q Consensus 1067 ---------~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~ga~~~eVEVD~~TG~v~V~r 1134 (1291)
...++|.+++..++.....|..+++|..+. .+.+.. ..+ ....+|+|+|+++|||||++||+++|+|
T Consensus 549 g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~v~v~~ 627 (746)
T TIGR03194 549 EMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPP-EFQGGKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHK 627 (746)
T ss_pred CEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCC-ccccccccccccCcccccceeEEEEEEEEECCCCCEEEEE
Confidence 123689999876665555788888886332 111110 000 0123679999999999999999999999
Q ss_pred EEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCC
Q 000775 1135 ANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP 1214 (1291)
Q Consensus 1135 ~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~ 1214 (1291)
+++++|||++|||++++||||||++||||++|+|++.|| +|+++|.||++|++|++.|+|+ |+|.++|+ +
T Consensus 628 ~~~~~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~d--------~G~~~~~~l~~Y~ipt~~d~P~-i~v~~ve~-~ 697 (746)
T TIGR03194 628 VWVAVDCGKAINPLAVEGQVQGAVWMGMGQALSEETVYD--------NGRMKHASLLDYRVPTIVESPD-IEVIIVES-M 697 (746)
T ss_pred EEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHhcCceEec--------CCeECCCChhhccCCChhccCC-eEEEEEeC-C
Confidence 999999999999999999999999999999999999998 4999999999999999999994 99999997 8
Q ss_pred CCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHh
Q 000775 1215 NVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1272 (1291)
Q Consensus 1215 ~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~ 1272 (1291)
++.+|||+||+||+++++ +++||+|||++|+ |++ ++++|+|||+|++++
T Consensus 698 ~~~~p~Gakg~GE~~~~~---~~~AIanAI~~A~---G~r---~~~lP~tpe~v~~al 746 (746)
T TIGR03194 698 DPNGPFGAKEASEGALAG---FLPAIHNAVYDAV---GVR---ATDLPLTPDRVTEAL 746 (746)
T ss_pred CCCCCCCCCcCCCCcccc---hHHHHHHHHHHhh---CCC---cccCCCCHHHHHhhC
Confidence 999999999999999974 6789999999998 886 789999999999875
No 11
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=9.1e-147 Score=1396.38 Aligned_cols=708 Identities=27% Similarity=0.377 Sum_probs=641.6
Q ss_pred ccCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCC--CCC-
Q 000775 527 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP- 603 (1291)
Q Consensus 527 ~iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~--~~~- 603 (1291)
+|||+++|+|+..||||+++|++|+.+ |||||++++|||++||+|+|||+++|+++|||++|+|++|+|+.|. .+.
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~~~-~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p~~~~~~~~~~ 80 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDYVM-AGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVPDIPFPTAGHP 80 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccCCC-CCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcCCccccccccc
Confidence 589999999999999999999999998 8999999999999999999999999999999999999999986442 111
Q ss_pred -------CCccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCC--CCCC-----Ccc
Q 000775 604 -------VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN-----TER 669 (1291)
Q Consensus 604 -------~~~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~--~~~~-----~~~ 669 (1291)
...++++|++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++ +|+. ...
T Consensus 81 ~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Veye~lp~v~~~~~Al~~~a~~ih~~~~ni~~~~ 160 (759)
T PRK09970 81 WSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEYEELPVITDPEAALAEGAPPIHNGRGNLLKQS 160 (759)
T ss_pred cCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeEEeCCccCCHHHHhCCCCCccCCCCCceeeee
Confidence 11378899999999999999999999999999999999999999999999999998776 3531 123
Q ss_pred eeecCCcccccccCCCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEE
Q 000775 670 CFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 749 (1291)
Q Consensus 670 ~~~~Gdv~~af~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~ 749 (1291)
.+..||++++| ++|++|||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..+|++||||++||||+
T Consensus 161 ~~~~Gd~~~a~--~~a~~vve~~y~~~~~~h~~mEp~~~iA~~~-~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~VrV~ 237 (759)
T PRK09970 161 TMSTGNVQQTI--KAADYQVQGHYETPIVQHCHMENVTSYAYME-DDGRITIVSSTQIPHIVRRVVGQALGIPWGKVRVI 237 (759)
T ss_pred eeccCChhHhh--ccCCEEEEEEEEECCEeEeccCCceEEEEEC-CCCCEEEEECCCcHHHHHHHHHHHhCCCHHHEEEE
Confidence 45789999999 9999999999999999999999999999997 56889999999999999999999999999999999
Q ss_pred ecccCCCCCCCCCcchHHHHHHHHHHHhC-CCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCC
Q 000775 750 TKRIGGGFGGKETRSAFIAAAAAVPSFLL-NRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGN 828 (1291)
Q Consensus 750 ~~~vGGgFGgK~~~~~~~a~~aAlaA~~~-grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga 828 (1291)
++++|||||+|.+... ...||++|+++ ||||||+|||+|+|+.+.+||++.++||+|+|+||+|++++++++.|+|+
T Consensus 238 ~~~vGGgFG~K~~~~~--~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga 315 (759)
T PRK09970 238 KPYVGGGFGNKQDVLE--EPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSNTGA 315 (759)
T ss_pred eCCCCCCcCcccccCH--HHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeecccc
Confidence 9999999999987532 45677888888 99999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCC
Q 000775 829 SLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE 908 (1291)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~ 908 (1291)
|.++++.++..+...+.++|+|||++++++.|+||++|+|+|||||.+|++|++|++||++|++|||||+|||++|++++
T Consensus 316 y~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~ 395 (759)
T PRK09970 316 YASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAARE 395 (759)
T ss_pred CCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCC
Confidence 99888778777777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccc-CccccCCCHHHHHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEEEEEecCCe
Q 000775 909 GSILHY-GQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGT 987 (1291)
Q Consensus 909 g~~~~~-g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGs 987 (1291)
|+.+++ |+.++++.+++||++++++++|++++++.+. .+.|++||+++++..++.++.....+++++.|+|++||+
T Consensus 396 g~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~dGs 472 (759)
T PRK09970 396 GDANPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECKN---QQGNLRRGVGVACFSYTSGTWPVGLEIAGARLLMNQDGT 472 (759)
T ss_pred CCcCCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHhh---hcCCceEEEEEEEEEEeecCCCCCCCcceEEEEEccCce
Confidence 999885 8888999999999999999999987664432 123567888888777776654333467899999999999
Q ss_pred EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecC-CCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 000775 988 VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSET-STDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1066 (1291)
Q Consensus 988 V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~-dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~ 1066 (1291)
|+|.+|.+|||||+.|+++||+||+||+|+++|+|... ||+.+|++++|+|||++.+.|.|+++||++||+||+..+++
T Consensus 473 v~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~lr~~l~~~aa~ 552 (759)
T PRK09970 473 VQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAIRKAALELKEKILAHAAV 552 (759)
T ss_pred EEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999887543
Q ss_pred C----------------------CCCCHHHHHHHhhcc---CcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEE
Q 000775 1067 H----------------------NFNSFAELASACYVQ---RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1121 (1291)
Q Consensus 1067 ~----------------------~~~~~~~~~~~a~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eV 1121 (1291)
. ..++|.+++..++.. ..++...+.|..+. .+|+|+||++||
T Consensus 553 ~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeV 619 (759)
T PRK09970 553 MLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTT-------------NPPAFGCTFVDV 619 (759)
T ss_pred HhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCC-------------CCCceEEEEEEE
Confidence 0 137899998887653 23466666654321 257899999999
Q ss_pred eeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCC-CCccccCCCCCCCCCCCCC
Q 000775 1122 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP-PGCLYTCGPGSYKIPSLND 1200 (1291)
Q Consensus 1122 EVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~-~G~~~~~~~~~Y~iP~~~d 1200 (1291)
|||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| + +|+++++||++|++|++.|
T Consensus 620 eVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d-------~~~G~~~~~~~~dY~ip~~~d 692 (759)
T PRK09970 620 EVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIID-------EKTGVVRNPNLLDYKLPTMMD 692 (759)
T ss_pred EEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEc-------CCCCeECCCChhhccCCCccc
Confidence 9999999999999999999999999999999999999999999999999998 5 4999999999999999999
Q ss_pred CCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000775 1201 VPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1274 (1291)
Q Consensus 1201 iP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1274 (1291)
+|+ |+|.++++ ++|.+|||+||+||++++ ++++||+|||++|+ |++ ++++|+|||+||+++.+
T Consensus 693 ~P~-i~v~~ve~-~~~~~p~GaKgvGE~~~~---~~~~AIanAi~~A~---G~r---~~~lP~tpe~v~~al~~ 755 (759)
T PRK09970 693 LPQ-LESAFVEI-YEPQSAYGHKSLGEPPII---SPAPAIRNAVLMAT---GVA---INTLPMTPQRLFEEFKE 755 (759)
T ss_pred CCC-eEEEEEec-CCCCCCCCCcccCCCccc---chHHHHHHHHHHhh---CCC---cCCCCCCHHHHHHHHHh
Confidence 995 99999997 899999999999999986 46789999999997 886 68999999999999864
No 12
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=1.7e-145 Score=1380.41 Aligned_cols=713 Identities=28% Similarity=0.371 Sum_probs=628.7
Q ss_pred ccCCccc-ccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCCCC
Q 000775 527 SVGSPEV-HLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 605 (1291)
Q Consensus 527 ~iGk~~~-r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~~~ 605 (1291)
+|||+++ |+|++.||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|.+|+|+.+.+|...
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p~~~~~g~~~ 80 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLRF-PGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVPGLARFGIII 80 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCCC-CCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCCCCCCCCccC
Confidence 4899999 99999999999999999998 899999999999999999999999999999999999999999766566666
Q ss_pred ccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCC--CCC--C--CcceeecCCcccc
Q 000775 606 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHP--N--TERCFRKGDVDIC 679 (1291)
Q Consensus 606 ~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~--~~~--~--~~~~~~~Gdv~~a 679 (1291)
.++|+|++++|||+|||||+|||+|+|+|++|+++|+|+||+||+++|+++|+++++ +|+ | .......||++++
T Consensus 81 ~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~a~~~~a~~i~~~~ni~~~~~~~~Gd~~~a 160 (768)
T TIGR03196 81 ADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDYEELAPMDDPDKALQPDAEPLHEAGNILHEAEFRHGDPDEG 160 (768)
T ss_pred CCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEEEeCCCcCCHHHHhcCCCCeECCCCcCcceeeeccCCHhHH
Confidence 789999999999999999999999999999999999999999999999999998664 342 1 1234578999999
Q ss_pred cccCCCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000775 680 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 759 (1291)
Q Consensus 680 f~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGg 759 (1291)
| ++|+++||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+
T Consensus 161 f--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~ 237 (768)
T TIGR03196 161 F--AAGDTVFEDQYELGMQDHAFLAPEAALAMPA-ADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGG 237 (768)
T ss_pred h--ccCCEEEEEEEEeCCeeeeecCCceEEEEEc-CCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCCCCccCC
Confidence 9 9999999999999999999999999999997 567899999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000775 760 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 839 (1291)
Q Consensus 760 K~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~ 839 (1291)
|.... ..+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.++++.+...
T Consensus 238 K~~~~--~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~~~v~~~ 315 (768)
T TIGR03196 238 KDDLN--IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLGPAVLAF 315 (768)
T ss_pred ccccc--HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCccHHHHHH
Confidence 98753 3577899999999999999999999999999999999999999999999999999999999998888777777
Q ss_pred HhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCcccc
Q 000775 840 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 919 (1291)
Q Consensus 840 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 919 (1291)
+...+.++|++||++++++.++||++|+|+|||||.+|+.|++|++||++|++|||||+|||++|+.++|+.+++|+++.
T Consensus 316 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 395 (768)
T TIGR03196 316 AVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLGPLEHRIA 395 (768)
T ss_pred HHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCcccC
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -CCCHHHHHHHHHHhCCCh-----hhhHhHhhhh------ccCcccccceEEEeeeeccccccccCCc--eeEEEEEecC
Q 000775 920 -HCTLFPLWNELKLSCDFL-----NARKEVDNFN------LNNRWKKRGIAMVPTKFGISFTLKLMNQ--AGALVHVYTD 985 (1291)
Q Consensus 920 -~~~l~~~l~~~~~~~~~~-----~r~~~~~~fn------~~~~~~~rGia~~~~~~g~~~~~~~~~~--~~a~V~i~~D 985 (1291)
+..+++||++++++++|. ++......|+ +++.+++||+++++..++.++.....+. +++.|+|+.|
T Consensus 396 ~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~~~rGiG~a~~~~~~~~~~~~~~~~~~~a~v~l~~d 475 (768)
T TIGR03196 396 APDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECGRLQRGTGAAIAMHGGGFGEGMDDAAVAGARLELAED 475 (768)
T ss_pred CcCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcCCeeEEEEEEEEEecccCCCCccccCCccEEEEEeCC
Confidence 788999999999999998 3322221222 1122345677777776665543211122 3789999999
Q ss_pred Ce--EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 000775 986 GT--VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPI 1063 (1291)
Q Consensus 986 Gs--V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~ 1063 (1291)
|+ |+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|++.|.||++||++||+||+++
T Consensus 476 Gsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~~ 555 (768)
T TIGR03196 476 GTVKIRAHFACAECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTSMSGGAIQGACAAFAAQLKAR 555 (768)
T ss_pred CCeEEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 96 8899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhc------------CC------------------CCCHHHHHHHhhccCcceeEEEEe-ecCCccccccCCCCCCcccc
Q 000775 1064 ASK------------HN------------------FNSFAELASACYVQRIDLSAHGFY-ITPEIDFDWITGKGNPFRYF 1112 (1291)
Q Consensus 1064 ~~~------------~~------------------~~~~~~~~~~a~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 1112 (1291)
+++ .. .++|.+++. ...+.+.+.| ..|...++...+.+.++.+|
T Consensus 556 aa~~l~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (768)
T TIGR03196 556 AAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAA-----DGPIAAETAFHDFPTSALDADVGQGDGHFAF 630 (768)
T ss_pred HHHHhCCChhhEEEeCCeeeecccceeeecCCCcceEEHHHHhc-----cccceeeeccccCCCcccccccccCCCcccc
Confidence 542 00 134555542 1123344433 22222222222233345678
Q ss_pred cEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCC
Q 000775 1113 TYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGS 1192 (1291)
Q Consensus 1113 ~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~ 1192 (1291)
+||||++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|.||++
T Consensus 631 ~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Gig~al~E~~~~~--------~G~~~~~~~~~ 702 (768)
T TIGR03196 631 AAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLALRGQIEGGAAMALGLALMEEAKMT--------DGRVAAENFDD 702 (768)
T ss_pred cceEEEEEEEEECCCCcEEEEEEEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhCCeEec--------CCeECCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999996 69999999999
Q ss_pred CCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000775 1193 YKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1269 (1291)
Q Consensus 1193 Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~ 1269 (1291)
|++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||+|||++|+ |++ ++++|+|||+|+
T Consensus 703 Y~~p~~~d~P~-~~~~~~~~-~~~~~p~G~kG~GE~~~~~---~~~AianAi~~A~---G~r---~~~lP~tpe~v~ 768 (768)
T TIGR03196 703 YLIPGIADVPD-LDFIAIED-LMKDAPYGPKGVGEAGTCA---ATPAIIAAIHDAV---GCD---INKLPIRPEDLL 768 (768)
T ss_pred ccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCcCccccc---hHHHHHHHHHHHh---CcC---cccCCCChhhCC
Confidence 99999999995 99999987 8999999999999999975 5678888888887 886 689999999984
No 13
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=5.2e-145 Score=1380.29 Aligned_cols=703 Identities=25% Similarity=0.305 Sum_probs=614.4
Q ss_pred CcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCC--CCCC-ccccccc
Q 000775 536 SSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRI--GPVV-ADEELFA 612 (1291)
Q Consensus 536 d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~--~~~~-~d~~~la 612 (1291)
|++++|||+++|++|+.+ |||||++++|||++||+|++||+|+|+++|||++|+|++|+|+.+.. +... .++|+|+
T Consensus 1 e~~r~vtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~~~~~~~~~la 79 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVKL-PGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHWMPTLAGDVQAVLA 79 (770)
T ss_pred CCcccccccccccccCCC-CCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcCCccCCcCCCCCCCCcccCc
Confidence 567999999999999998 89999999999999999999999999999999999999999864421 1111 2378999
Q ss_pred cCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCCC--CCCC----------------ccee---
Q 000775 613 SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT----------------ERCF--- 671 (1291)
Q Consensus 613 ~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~~--~~~~----------------~~~~--- 671 (1291)
+++|||+|||||+|||+|+++|++|+++|+|+||+||+++|++||++.++. |+.. ....
T Consensus 80 ~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~ye~lp~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~~~~~g 159 (770)
T TIGR02416 80 DEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIFRWEIG 159 (770)
T ss_pred CCEEEEcCCcEEEEEECCHHHHHHHhccceeeeecCCccCCHHHHhcCCCceecCCCCCccccccccccccceeeEEecC
Confidence 999999999999999999999999999999999999999999999987663 4310 0112
Q ss_pred ecCCcccccccCCCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000775 672 RKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 751 (1291)
Q Consensus 672 ~~Gdv~~af~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~ 751 (1291)
..||++++| ++|++|||++|++++|+|+||||++|+|+|++++|+|+||+|||+|+.+|..||++||||++||||+++
T Consensus 160 d~gd~~~af--~~a~~vve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~ 237 (770)
T TIGR02416 160 DKAATDAVF--AKAEVVVKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISP 237 (770)
T ss_pred CccchhHHh--ccCCEEEEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEcC
Confidence 345579999 999999999999999999999999999999843688999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCC
Q 000775 752 RIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 831 (1291)
Q Consensus 752 ~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 831 (1291)
++|||||+|...... .+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+
T Consensus 238 ~vGGgFG~K~~~~~~-~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~ 316 (770)
T TIGR02416 238 DIGGGFGNKVGIYPG-YVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHGAFDA 316 (770)
T ss_pred CCCCCcccccccccH-HHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeeccccCC
Confidence 999999999875333 3458899999999999999999999999999999999999999999999999999999999987
Q ss_pred chHHHHHHHhh--ccCCCcccCeEEEEEEEEeCCCCCCC-ccC-CCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCC
Q 000775 832 LSLAVLERAMF--HSDNVYEIPNVRIMGNVCFTNFPSNT-AFR-GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 907 (1291)
Q Consensus 832 ~~~~~~~~~~~--~~~~~Y~ipn~~~~~~~v~TN~~~~~-a~R-g~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~ 907 (1291)
++..+...... .+.++|+|||++++++.|+||++|.+ +|| |||.+|++|++|++||++|++|||||+|||++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~ 396 (770)
T TIGR02416 317 CADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNFIQ 396 (770)
T ss_pred CccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCC
Confidence 65544333222 47899999999999999999999997 999 899999999999999999999999999999999998
Q ss_pred CCC---ccccCccccCCCHHHHHHHHHHhCCChhhhHhHhhhhccCcc-cccceEEEeeeecccccc-ccC------Cce
Q 000775 908 EGS---ILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRW-KKRGIAMVPTKFGISFTL-KLM------NQA 976 (1291)
Q Consensus 908 ~g~---~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~-~~rGia~~~~~~g~~~~~-~~~------~~~ 976 (1291)
+++ .+++|+.+++..+++||+++++.++|++++++.+.++..+++ ..||++++...+..+... ... ..+
T Consensus 397 ~~~~p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~~~~~~~ 476 (770)
T TIGR02416 397 PEQFPYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGPSKNCDILGVGMFD 476 (770)
T ss_pred CccCccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEEeccCCCcccccccccCccc
Confidence 765 345588999999999999999999999877655444444542 133444443222222111 001 145
Q ss_pred eEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHH
Q 000775 977 GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQI 1056 (1291)
Q Consensus 977 ~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L 1056 (1291)
++.|+|+.||+|+|.+|++|||||++|+++||+||+||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++|
T Consensus 477 ~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l 556 (770)
T TIGR02416 477 SCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPVAGAATALAARKI 556 (770)
T ss_pred eEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-------------------C---CCCCHHHHHHHhhccC-----cceeEEEEeecCCccccccCCCCCCc
Q 000775 1057 KARMEPIASK-------------------H---NFNSFAELASACYVQR-----IDLSAHGFYITPEIDFDWITGKGNPF 1109 (1291)
Q Consensus 1057 ~~rl~~~~~~-------------------~---~~~~~~~~~~~a~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~ 1109 (1291)
|+||++++++ . ..++|.+++..+|... .+|.+.++|..+.
T Consensus 557 ~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 623 (770)
T TIGR02416 557 KAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPPN------------- 623 (770)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEeCCCC-------------
Confidence 9999888542 0 1268999998876431 2377777764321
Q ss_pred ccccEEEEEEEEeeeCCCCcEEEEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCC
Q 000775 1110 RYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCG 1189 (1291)
Q Consensus 1110 ~~~~~ga~~~eVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~ 1189 (1291)
.+|+||+|++|||||++||+++|+|+++++|||++|||.+++|||+||++||||++|+|++.|| ++|+++|.+
T Consensus 624 ~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d-------~~G~~l~~~ 696 (770)
T TIGR02416 624 MTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFD-------EQGNVLGAS 696 (770)
T ss_pred CCCCceeEEEEEEEECCCCeEEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceEC-------CCCCCCCCC
Confidence 2578999999999999999999999999999999999999999999999999999999999999 689999999
Q ss_pred CCCCCCCCCCCCCCccEEEEecCCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000775 1190 PGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1269 (1291)
Q Consensus 1190 ~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~ 1269 (1291)
|+||++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||+|||++|++++|++ ++++|+|||+||
T Consensus 697 ~~dY~iPta~DvP~-~~~~~~e~-~~~~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~Gv~---~~~lP~Tpe~v~ 768 (770)
T TIGR02416 697 LMDYFLPTAVETPH-WETDHTVT-PSPHHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFLGVG---HIDMPHTAWRVW 768 (770)
T ss_pred hhhCcCCchhcCCC-eEEEEeec-CCCCCCCCccccCCccccc---HHHHHHHHHHHHHhhcCCC---cccCCCCHHHHh
Confidence 99999999999996 99999987 8999999999999999986 4578889999888777986 689999999998
Q ss_pred H
Q 000775 1270 M 1270 (1291)
Q Consensus 1270 ~ 1270 (1291)
+
T Consensus 769 ~ 769 (770)
T TIGR02416 769 K 769 (770)
T ss_pred h
Confidence 5
No 14
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=1.1e-114 Score=1093.83 Aligned_cols=700 Identities=29% Similarity=0.382 Sum_probs=613.7
Q ss_pred CCccCCcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCC-CCCCCC
Q 000775 525 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG-DNRIGP 603 (1291)
Q Consensus 525 ~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~-~n~~~~ 603 (1291)
...+|+++.|.|+..||||+++|++|+.. |||+|++|||||++|++|++||.++|+++|||++|+|++|+|. .+....
T Consensus 3 ~~~~gr~~~R~~~~~~vtG~~~y~~d~~~-~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~~~~~~~~ 81 (731)
T COG1529 3 AEIIGRSVLRADGLGKVTGKGRYADDIVA-PGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPAWSPVRVE 81 (731)
T ss_pred cccCCCCcccccchhheeeeeheehhhcC-CCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCccccccccc
Confidence 45799999999999999999999999998 7999999999999999999999999999999999999999985 221111
Q ss_pred CCccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecCCCCCHHHHHhcCC--CCCC--CcceeecCCcccc
Q 000775 604 VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN--TERCFRKGDVDIC 679 (1291)
Q Consensus 604 ~~~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp~v~~~~~A~~~~~--~~~~--~~~~~~~Gdv~~a 679 (1291)
.....++|+.++|+|+||+||+|+|+|+++|++|+++|+|+||++|++.++++|+.++. +|+. .......||.+ +
T Consensus 82 ~~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~ye~l~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~~~-a 160 (731)
T COG1529 82 LAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEYEALPPVVDPEEALAEDAPVIHDELNIARDATFGDDD-A 160 (731)
T ss_pred cCCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeeeccCCCcCCHHHHhcCCCcccccccccccccccccch-h
Confidence 11222278999999999999999999999999999999999999999999999999875 3441 24456678888 9
Q ss_pred cccCCCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000775 680 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 759 (1291)
Q Consensus 680 f~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~~vGGgFGg 759 (1291)
| ++|+++++.+|.++.+.|.+|||++++++|+ ++++|++|++||+|+.++..++++|++|+++|||+++++|||||+
T Consensus 161 ~--a~A~~~v~~~~~~~~~~~~~~E~~g~~a~~~-d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggfG~ 237 (731)
T COG1529 161 F--AAAAVVVEAPYKTPRKDPNPMEPHGVVAVPD-DGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFGS 237 (731)
T ss_pred h--hcCcEEeeeeeeccCcCccCcccccceeeEc-CCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCcccCC
Confidence 9 9999999999999999999999999999998 455999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000775 760 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 839 (1291)
Q Consensus 760 K~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~ 839 (1291)
|... +.....++++|+++||||||+++|+|.|+.+.+||+...++++++++||+|+++.+++..|.|+|. +..+...
T Consensus 238 K~~~-~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~~~ 314 (731)
T COG1529 238 KGVV-YVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN--GPTVPAA 314 (731)
T ss_pred cccc-eeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc--ccchhHH
Confidence 9875 455667779999999999999999999999999999999999999999999999999999999996 4445666
Q ss_pred HhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCcccc
Q 000775 840 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 919 (1291)
Q Consensus 840 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 919 (1291)
....+.++|.|+|.++..+.++||++|+++|||+|.++++|++|++||+||++|||||+|+|++|++..|... .+..++
T Consensus 315 ~~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~-~~~~~~ 393 (731)
T COG1529 315 AAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG-LGRRYD 393 (731)
T ss_pred HHHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC-Cccccc
Confidence 7778899999999999999999999999999999999999999999999999999999999999999887766 677888
Q ss_pred CCCHHHHHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCc
Q 000775 920 HCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQ 999 (1291)
Q Consensus 920 ~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~Gq 999 (1291)
+.++.+|+++++++.+|.+|.......+..+.++|+|+++ ..+++.+.. ...+.|+++.||+++|.+|.+++||
T Consensus 394 ~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~--~~~~~~~~~----~~~a~v~~~~~g~v~v~~g~~~~G~ 467 (731)
T COG1529 394 SGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAM--YTEPSGAGP----GEGARVRLEADGTVTVRTGATDIGQ 467 (731)
T ss_pred CccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEE--EEEeccCCC----CCcEEEEEcCCCcEEEEECCccCCC
Confidence 9999999999999999987655444444444334455444 444443321 1569999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcC------------
Q 000775 1000 GLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH------------ 1067 (1291)
Q Consensus 1000 G~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~~------------ 1067 (1291)
|++|.++|++|+.||||.++|++..+||+..+.+++|+|||++.+.+.|+++||++|++++...+...
T Consensus 468 G~~t~~~q~~ae~lgip~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~~~~~~~~~~~ 547 (731)
T COG1529 468 GTDTVLAQIAAEELGIPPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGADAEDVVLED 547 (731)
T ss_pred cHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhCCChhHeeecc
Confidence 99999999999999999999999999999999999999999999999999999999998886654320
Q ss_pred -------C-C---CCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCcEEEEEEE
Q 000775 1068 -------N-F---NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMAN 1136 (1291)
Q Consensus 1068 -------~-~---~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~ 1136 (1291)
. . .+|.+.+..+. ...+....+|. ...+|+||||++|||||++||++||+|++
T Consensus 548 g~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~~--------------~~~~~~~~A~~~EV~Vd~~tG~vrV~r~~ 611 (731)
T COG1529 548 GAFKVGGGDRRSAVSLKEVAGKGL--APGLAVAASFG--------------SDNTYPYGAHIAEVEVDPETGEVRVLRVV 611 (731)
T ss_pred CeeeeccCCccceeeHHHhhhccc--cCccccccccc--------------ccccccceeEEEEEEEECCCCcEEEEEEE
Confidence 0 0 24555544320 01111222111 01168899999999999999999999999
Q ss_pred EEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCC
Q 000775 1137 VILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNV 1216 (1291)
Q Consensus 1137 ~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~~ 1216 (1291)
+++|||++|||++++|||+||++||||++|+|+.+|| ++|+++|.||.+|.||++.|+|. ++|+++++ |++
T Consensus 612 ~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d-------~~g~~~~~n~~dY~ip~~~d~P~-iev~~v~~-p~~ 682 (731)
T COG1529 612 AVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYD-------EDGQLLNSNLADYGIPRAADAPE-VEVEFVES-PSP 682 (731)
T ss_pred EEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceEC-------CCCCcCCCCcccccCCCcccCCc-eEEEEecC-CCC
Confidence 9999999999999999999999999999999999999 79999999999999999999997 99999998 678
Q ss_pred CCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000775 1217 KAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACL 1273 (1291)
Q Consensus 1217 ~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~ 1273 (1291)
.+|+|+||+||+++++ +++||+|||++|+ |.+ ++++|+|||+|+.++.
T Consensus 683 ~~p~g~kGvGE~g~~~---~~pAvaNAV~~At---Gkr---i~~lP~tp~~i~~al~ 730 (731)
T COG1529 683 FGPLGAKGVGEGGIIG---IAPAIANAVFDAT---GKR---IRDLPITPERILAALR 730 (731)
T ss_pred CCCCCCCCcCcCccCc---hhHHHHHHHHHHh---CCc---cccCCCCHHHHHHhhh
Confidence 8899999999999975 5689999999997 886 6899999999999875
No 15
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=3.5e-105 Score=990.07 Aligned_cols=524 Identities=35% Similarity=0.500 Sum_probs=436.2
Q ss_pred cceeecCCcccccccCCCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEE
Q 000775 668 ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVV 747 (1291)
Q Consensus 668 ~~~~~~Gdv~~af~~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~ 747 (1291)
....++||++++| ++|+++||++|++++++|++|||++|+|+|+ ++|+|+||++||+|+.+|..||++||||++|||
T Consensus 15 ~~~~~~GDve~af--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~ 91 (547)
T PF02738_consen 15 ERHIERGDVEAAF--AEADHVVEAEYRTPRQAHAPMEPHGAVAWWD-EDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVR 91 (547)
T ss_dssp EEEEEESSHHHHH--HHTSEEEEEEEEE-BB----SS-SEEEEEEE-TTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEE
T ss_pred ccccccCCHHHHH--hhCCEEEEEEEEECCccccCCCCCeEEEEEc-cCCCEEEEECCcCHhHHHHHHhhhhcCChhHEE
Confidence 4567899999999 9999999999999999999999999999998 689999999999999999999999999999999
Q ss_pred EEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCC
Q 000775 748 CKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAG 827 (1291)
Q Consensus 748 V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~G 827 (1291)
|+.+++|||||.|. ....+++.||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|++++++.|+|
T Consensus 92 V~~~~~GGgFG~~~-~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~G 170 (547)
T PF02738_consen 92 VISPYVGGGFGKKK-QDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGG 170 (547)
T ss_dssp EEESB-S--TTTTS-STHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEE
T ss_pred EeeeecCCCCCCcc-ccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCC
Confidence 99999999999333 34678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCC
Q 000775 828 NSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 907 (1291)
Q Consensus 828 a~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~ 907 (1291)
+|.+++..+....+....++|+|||++++++.|+||++|.++|||||.+|+.|++|++||++|++|||||+|||++|+.+
T Consensus 171 a~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~ 250 (547)
T PF02738_consen 171 AYASFSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLID 250 (547)
T ss_dssp SS-TTHHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-G
T ss_pred ccccccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhcccc
Confidence 99999888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCccccCCCHHH-HHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEEEEEecCC
Q 000775 908 EGSILHYGQQLQHCTLFP-LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 986 (1291)
Q Consensus 908 ~g~~~~~g~~~~~~~l~~-~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DG 986 (1291)
.++.+++|..++++.+.+ ||+++++.++|.+|.++.+.|+..+.|++||+++++..++.++.....+.+++.|+|++||
T Consensus 251 ~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l~~DG 330 (547)
T PF02738_consen 251 PGDRTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRLNPDG 330 (547)
T ss_dssp TTEB-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE-TTS
T ss_pred cccccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccccccCCcEEEEEEeCC
Confidence 999999999999999998 9999999999999998888888888999999999998888877655456789999999999
Q ss_pred eEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 000775 987 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1066 (1291)
Q Consensus 987 sV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~ 1066 (1291)
+|+|.+|.+|||||++|+++||+||+||||+++|+|..+||+.+|++++|+|||++++.|.|+++||++||++|.+.++.
T Consensus 331 ~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~ 410 (547)
T PF02738_consen 331 SVTVYTGGVEMGQGSRTALAQIAAEELGIPPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLREKLLEIAAE 410 (547)
T ss_dssp -EEEEES--BSSSSHHHHHHHHHHHHHTS-GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccCCcchhhhHHHHHHHHhCCChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C-----CCCCHHHH--HHHhhccCcceeEEEEeecCCccccccC-CCCCCcccccEEEEEEEEeeeCCCCcEEEEEEEEE
Q 000775 1067 H-----NFNSFAEL--ASACYVQRIDLSAHGFYITPEIDFDWIT-GKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVI 1138 (1291)
Q Consensus 1067 ~-----~~~~~~~~--~~~a~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~~ 1138 (1291)
. .++.|++- ........+.+.+...+..+...++... ..+..+.+++||++++|||||++||+++|+|++++
T Consensus 411 ~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~v~v~~~~~~ 490 (547)
T PF02738_consen 411 ILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFGAHFAEVEVDTETGEVRVLRVVAA 490 (547)
T ss_dssp HTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEEEEEEEEEEETTTSEEEEEEEEEE
T ss_pred hcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeeeeeecccccccccccccceeeeee
Confidence 2 23455554 4444444444444444333322222222 13567788999999999999999999999999999
Q ss_pred EecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCC
Q 000775 1139 LDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVP 1202 (1291)
Q Consensus 1139 ~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP 1202 (1291)
+|||++|||++++||||||++||||++|+|++.|| ++|+++|.+|++|++|++.|+|
T Consensus 491 ~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d-------~~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 491 HDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYD-------ENGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp EEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBT-------TTSEBSTSSTTTST---GGGS-
T ss_pred ccCCcccCHHHHhhhccccHHHHHHHHhcCCeEEC-------CCCcCCCCChhhCcCCCccccC
Confidence 99999999999999999999999999999999998 7999999999999999999998
No 16
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.9e-97 Score=808.03 Aligned_cols=414 Identities=33% Similarity=0.571 Sum_probs=370.2
Q ss_pred CccccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhh
Q 000775 1 MHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLA 80 (1291)
Q Consensus 1 ~~~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~ 80 (1291)
+|++||+||.++.++||++|+|||+|+..++.||||||+|+++|||||||||||||||+|+|..+.+.| +++.|+++|+
T Consensus 68 ~yeSVNACirfl~sL~G~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~~~~P-~~a~i~kALq 146 (493)
T COG4630 68 RYESVNACIRFLGSLDGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMNSPTP-SRAAIEKALQ 146 (493)
T ss_pred eeeehhHHHHHHhhcCCceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhcCCCC-chhHHHHHhh
Confidence 589999999999999999999999999655569999999999999999999999999999999999999 9999999999
Q ss_pred CcccccCCChhHHHHHHHHHhcccccccccccccccCCccccCCCCCCCCCCCCCCCCCCccccccccCCCccccccccC
Q 000775 81 GNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEI 160 (1291)
Q Consensus 81 gnlCrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 160 (1291)
|||||||||+||++|....+..... +..|
T Consensus 147 GNLCRCTGY~pI~~AA~~~~a~~~~--------a~fD------------------------------------------- 175 (493)
T COG4630 147 GNLCRCTGYRPIIRAAEAIAALGPA--------AGFD------------------------------------------- 175 (493)
T ss_pred CCcccccCchHHHHHHHHHhccCCc--------ccCC-------------------------------------------
Confidence 9999999999999999977653221 0000
Q ss_pred CCCcCCccccCCchhhhhcC-CCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEeC
Q 000775 161 DGSTYTEKELIFPPELLLRK-SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISV 239 (1291)
Q Consensus 161 ~~~~~~~~~~~~p~~l~~~~-~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl 239 (1291)
|..-..-..-+.|.... ...+.+ +++...++.|.+++++.+++++||+++||||+||+++|+++.......+|.+
T Consensus 176 ---Pl~~~R~~~~~~L~A~~~~e~v~~-~~~~~r~~~P~~l~D~a~l~aa~P~AtivAGsTDvgLwVtk~mr~l~~vi~v 251 (493)
T COG4630 176 ---PLAARRTAITARLRALRDTETVEV-GSGDDRFIVPATLADFADLLAAHPGATIVAGSTDVGLWVTKQMRDLNPVIFV 251 (493)
T ss_pred ---hhhhhHHHHHHHHhhccCCcEEEe-cCCCceeEeeccHHHHHHHHhhCCCCEEEecCcchhhHHHHHHhhcCCeEEe
Confidence 00000000012222222 234555 5556789999999999999999999999999999999999998888899999
Q ss_pred CCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCCh
Q 000775 240 THVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDL 319 (1291)
Q Consensus 240 ~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~ 319 (1291)
++|+||+.|++..++|+|||++||++....|.. .+|.|.+.+.+|||.||||+|||||||+|+||++|.
T Consensus 252 ~~l~eL~~i~~~~~~l~iGAgvt~t~a~~~la~-----------~~P~l~~L~~r~gg~qvRN~gTlGGNIangSPIGDt 320 (493)
T COG4630 252 GHLAELRRIEVSTGGLEIGAGVTYTQAYRALAG-----------RYPALGELWDRFGGEQVRNMGTLGGNIANGSPIGDT 320 (493)
T ss_pred cchhhhheeeecCCcEEEccCccHHHHHHHHHh-----------hCchHHHHHHHhcchhhhccccccccccCCCcCCCC
Confidence 999999999999999999999999999987643 456788999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchhhcceEEEEE
Q 000775 320 NPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVY 399 (1291)
Q Consensus 320 ~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~ 399 (1291)
+|+|+||||+|+|++.++ .|++||++||.+|+|++++|||+|.+|+||.+.+...|.+||++||+..|||.|.+||.++
T Consensus 321 PPaLIALgA~ltLr~g~~-~RtlPLe~~Fi~Y~kqdr~pGEfVe~v~vP~~~~~~rfa~yKisKRrdeDISAv~~Af~l~ 399 (493)
T COG4630 321 PPALIALGATLTLRSGDG-RRTLPLEDYFIAYGKQDRQPGEFVEAVRVPLPAPSERFAAYKISKRRDEDISAVCGAFALD 399 (493)
T ss_pred CchhhhcCcEEEEEecCC-cccccHHHHHHHhhhhccCcchhhhheecCCCCcchhhhhhhhhhhccchHHHHHhHheee
Confidence 999999999999999999 9999999999999999999999999999999987888999999999999999999999999
Q ss_pred EecCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 000775 400 LEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKF 479 (1291)
Q Consensus 400 ~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~ 479 (1291)
++++ +|.++||+||||+.+|.|+.++|++|.||+|++++++.|.+++..+++|-.|. |+|++||..+++||++||
T Consensus 400 Ldg~----~V~~arIa~GGmAaTPkRA~~~EaAL~Gk~wteatve~A~aAl~~D~tPltD~-RAsaeYR~l~a~nlL~Rf 474 (493)
T COG4630 400 LDGG----RVADARIAFGGMAATPKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTDM-RASAEYRALTAKNLLRRF 474 (493)
T ss_pred ecCC----eeeeeeeecCccccCccchHHHHHHHcCCCccHHHHHHHHHHHhcCCCcccch-hhhHHHHHHHHHHHHHHH
Confidence 9854 89999999999999999999999999999999999999999999999966554 899999999999999999
Q ss_pred HHHHHhhh
Q 000775 480 FLWVSHQM 487 (1291)
Q Consensus 480 l~~~~~~~ 487 (1291)
|+|..+..
T Consensus 475 flEt~~~~ 482 (493)
T COG4630 475 FLETQGEA 482 (493)
T ss_pred hhhccCCc
Confidence 99988654
No 17
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=100.00 E-value=8.2e-93 Score=850.41 Aligned_cols=405 Identities=36% Similarity=0.621 Sum_probs=363.8
Q ss_pred CccccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhh
Q 000775 1 MHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLA 80 (1291)
Q Consensus 1 ~~~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~ 80 (1291)
+|++||||++|+++++|++|+|||||++..+.+||||++|+++|++|||||||||||++++||+++++| +++||+++|+
T Consensus 60 ~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~-~~~~i~~~l~ 138 (467)
T TIGR02963 60 RYRSVNACIQFLPSLDGKAVVTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAP-SRADIEDALQ 138 (467)
T ss_pred cceEEehhhhhHHhcCCCEEEecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhcCCCC-CHHHHHHHhc
Confidence 479999999999999999999999998435679999999999999999999999999999999999999 9999999999
Q ss_pred CcccccCCChhHHHHHHHHHhcccccccccccccccCCccccCCCCCCCCCCCCCCCCCCccccccccCCCccccccccC
Q 000775 81 GNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEI 160 (1291)
Q Consensus 81 gnlCrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 160 (1291)
|||||||||++|++|++.++.. . |
T Consensus 139 gnlCRCtgy~~i~~a~~~~~~~-~--------------------------~----------------------------- 162 (467)
T TIGR02963 139 GNLCRCTGYRPILDAAEAAFDY-P--------------------------C----------------------------- 162 (467)
T ss_pred CCcccCCCCHHHHHHHHHHHhC-C--------------------------C-----------------------------
Confidence 9999999999999999544321 0 1
Q ss_pred CCCcCCcc-ccCCchhhhhc-CCCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEe
Q 000775 161 DGSTYTEK-ELIFPPELLLR-KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLIS 238 (1291)
Q Consensus 161 ~~~~~~~~-~~~~p~~l~~~-~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lId 238 (1291)
+++|++. +++| ++|... ...++.+ ..++.+||+|+|++||+++|+++|+++++|||||++++++++...++++||
T Consensus 163 -~~~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~P~sl~Ea~~ll~~~~~a~lvAGGTdl~~~~~~~~~~~~~lId 239 (467)
T TIGR02963 163 -SDPLDADRAPII-ERLRALRAGETVEL-NFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRDLPDVIY 239 (467)
T ss_pred -CCcCCcchhhhh-hHHHhcCCCcceee-cCCCceEECCCCHHHHHHHHhhCCCCEEEecCcchHHHHhcCCCCCCeEEE
Confidence 0123333 4456 344332 2344455 334679999999999999999999999999999999999999989999999
Q ss_pred CCCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCC
Q 000775 239 VTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISD 318 (1291)
Q Consensus 239 l~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD 318 (1291)
|++|+||+.|+.++++|+|||++||+|+.+.++ +.+|.|.+++++|||+||||+|||||||++++|+||
T Consensus 240 l~~I~EL~~I~~~~~~l~IGA~vT~~el~~~l~-----------~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~sD 308 (467)
T TIGR02963 240 VGQVAELKRIEETDDGIEIGAAVTLTDAYAALA-----------KRYPELGELLRRFASLQIRNAGTLGGNIANGSPIGD 308 (467)
T ss_pred CCCChhhccEEEcCCEEEEecCCcHHHHHHHHH-----------HHhHHHHHHHHHhCCHHHcCceecccccccCCCchH
Confidence 999999999999999999999999999976543 256789999999999999999999999999999999
Q ss_pred hHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchhhcceEEEE
Q 000775 319 LNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRV 398 (1291)
Q Consensus 319 ~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~ 398 (1291)
++|+|+||||+|+|.+.+| +|+||++|||.||+++.|+++|||++|+||.+..+.++.+||+++|+++|||+||+|+++
T Consensus 309 ~~p~LlALdA~v~l~~~~G-~R~vpl~dF~~g~~kt~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v 387 (467)
T TIGR02963 309 SPPALIALGARLTLRKGEG-RRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGERFRAYKISKRFDDDISAVCAAFNL 387 (467)
T ss_pred HHHHHHHcCCEEEEEcCCC-cEEEeHHHhhcccccccCCCCceEEEEEecCCCCCCceEEEEecccccccceeeEEEEEE
Confidence 9999999999999999999 999999999999999999999999999999776667788999999999999999999999
Q ss_pred EEecCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH
Q 000775 399 YLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFK 478 (1291)
Q Consensus 399 ~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r 478 (1291)
+++ ++ +|+++||+||||+++|+|+.++|++|.|++|+++++++|++++.+++.+.++ .++|++||++|+.+|++|
T Consensus 388 ~~~-~~---~i~~~ria~Ggva~~p~r~~~~E~~L~G~~~~~~~l~~a~~~l~~~~~p~~d-~r~sa~YR~~la~~l~~r 462 (467)
T TIGR02963 388 ELD-GG---VVAEIRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSD-MRASAEYRLLTAKNLLRR 462 (467)
T ss_pred EEc-CC---eEeEEEEEEecCCCCceehHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCC-CCCCHHHHHHHHHHHHHH
Confidence 997 45 8999999999999999999999999999999999999999999999975554 479999999999999999
Q ss_pred HHHH
Q 000775 479 FFLW 482 (1291)
Q Consensus 479 ~l~~ 482 (1291)
++.+
T Consensus 463 ~~~~ 466 (467)
T TIGR02963 463 FFLE 466 (467)
T ss_pred HHhh
Confidence 9876
No 18
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional
Probab=100.00 E-value=6.5e-57 Score=513.43 Aligned_cols=280 Identities=25% Similarity=0.377 Sum_probs=262.1
Q ss_pred EEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEc-CCeEEEcccCcHHHHHHHhh
Q 000775 193 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK-DDGLEIGAAVRLTELLKMFR 271 (1291)
Q Consensus 193 ~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~-~~~l~IGA~vTl~~l~~~l~ 271 (1291)
+|++|+|++||+++|+++|+++++||||||+++++.+...|+++|||++|+||+.|+.. +++|+|||+||+++++++
T Consensus 6 ~~~~P~sl~Ea~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l~~~-- 83 (291)
T PRK09971 6 EYHEAATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQIIED-- 83 (291)
T ss_pred ceeCCCCHHHHHHHHHhCCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHHhcC--
Confidence 89999999999999999999999999999999999999999999999999999999964 578999999999999985
Q ss_pred hhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccC
Q 000775 272 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 351 (1291)
Q Consensus 272 ~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~ 351 (1291)
+.+.. .+|.|.+++++||++||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|+||++|||.|+
T Consensus 84 ~~i~~-------~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~sD~~~~Llal~A~v~i~~~~g-~R~vp~~df~~g~ 155 (291)
T PRK09971 84 PIIQK-------HLPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNG-VRFVPINGFYTGP 155 (291)
T ss_pred hHHHH-------HhHHHHHHHHHhCCHHHhcceecccccccCCcchhHHHHHHHcCCEEEEEcCCC-cEEEEHHHhcCCc
Confidence 55543 689999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccccCCCceEEEEEEecCCC-CCcceEEEEEeecCccchhhcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHHHH
Q 000775 352 RKVDLTSGEILLSIFLPWTR-PFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTK 430 (1291)
Q Consensus 352 ~~t~L~~~Eii~~I~iP~~~-~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E 430 (1291)
+++.|+++|||++|+||.+. .+..+.+||+++|+++|||+||+|+.++++ ++ +|+++||+|||++++|+|+.++|
T Consensus 156 ~~t~l~~~Eil~~I~iP~~~~~~~~~~~~K~~~R~~~~~a~v~~a~~~~~~-~g---~i~~~ria~G~v~~~p~r~~~~E 231 (291)
T PRK09971 156 GKVSLEHDEILVAFIIPPEPYEHAGGAYIKYAMRDAMDIATIGCAVLCRLD-NG---NFEDLRLAFGVAAPTPIRCQHAE 231 (291)
T ss_pred cccccCCCceEEEEEeCCCCCCCCceEEEEEcccchhhHhHheeEEEEEEc-CC---EEEEEEEEEEcccCceeeHHHHH
Confidence 99999999999999999753 345667889999999999999999999986 45 89999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 000775 431 TFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 487 (1291)
Q Consensus 431 ~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~~ 487 (1291)
++|.|+.|++++++++.+.+.+++.|.++ .++|++||++|+.+|++|++.++..+.
T Consensus 232 ~~L~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YR~~l~~~l~~r~l~~~~~~~ 287 (291)
T PRK09971 232 QTAKGAPLNLETLEAIGELVLQDVAPRSS-WRASKEFRLHLIQELTKRVIKEAVAAA 287 (291)
T ss_pred HHhCCCCCCHHHHHHHHHHHHhcCCCCCC-CCcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987766 699999999999999999999987653
No 19
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit. This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=1.9e-53 Score=484.42 Aligned_cols=277 Identities=21% Similarity=0.273 Sum_probs=253.7
Q ss_pred CeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHh
Q 000775 191 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 270 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 270 (1291)
.|+|++|+|++||+++|+++++++++||||||+++++.+...|+++|||++|+||++|+.++++|+|||+||+++|+++
T Consensus 4 ~f~~~~P~sl~eA~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~l~~~- 82 (321)
T TIGR03195 4 DFRTLRPASLADAVAALAAHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAALAED- 82 (321)
T ss_pred CceEECCCCHHHHHHHHhhCCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHHHhhC-
Confidence 5799999999999999999999999999999999999998899999999999999999999999999999999999987
Q ss_pred hhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccc--------------------------------------c
Q 000775 271 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC--------------------------------------T 312 (1291)
Q Consensus 271 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~--------------------------------------~ 312 (1291)
+.+++ .+|.|.++++.||++||||+|||||||| +
T Consensus 83 -~~i~~-------~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~c~ 154 (321)
T TIGR03195 83 -ALVRT-------RWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVAPKSDRCY 154 (321)
T ss_pred -hhhHh-------HhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCccccccCCCcccc
Confidence 55543 6899999999999999999999999999 5
Q ss_pred cCCCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccC--ccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchh
Q 000775 313 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY--RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIA 390 (1291)
Q Consensus 313 asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~--~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia 390 (1291)
++|.||++|+|+||||+|+|.+.+| +|+||++|||.|+ +++.|+++|||++|+||.+. +..+.|+|+.+|.+.||+
T Consensus 155 a~p~sD~~~~LlAldA~v~i~~~~g-~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~~-~~~~~y~k~~~r~a~~~~ 232 (321)
T TIGR03195 155 AAFSGDVAPALLVLDAEAEIVGPAG-VRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPTG-GWTSAYSKVRVRGAIDFP 232 (321)
T ss_pred CCCchHHHHHHHHcCCEEEEEeCCc-cEEEEHHHHhcccCCccccCCCCCeEEEEEecCCC-CCccEEEEEecCccccce
Confidence 7789999999999999999999999 9999999999954 57999999999999999753 344556677778899999
Q ss_pred hcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHH
Q 000775 391 LVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKS 470 (1291)
Q Consensus 391 ~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~ 470 (1291)
++++|+.++.+ ++ +|+++||+|||++++|+|++++ ++|.|+.|+++++++|.+++.+++.|.++ .++|++||++
T Consensus 233 ~~~vav~l~~~-~~---~i~~~ria~Ggva~~p~r~~~~-e~l~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YRr~ 306 (321)
T TIGR03195 233 LAGVAVALQRD-GD---RIAGLRVALTGTNSRPLMVPGT-DALAGRPLDDAAAEEIARLVRKTSQPMRT-TLMGVKYRRR 306 (321)
T ss_pred eEEEEEEEEeC-CC---eEEEEEEEEECccCceeehHHH-HHhcCCCCCHHHHHHHHHHHHhhCCCccC-CCCCHHHHHH
Confidence 99999998886 45 8999999999999999999999 55899999999999999999999987665 4799999999
Q ss_pred HHHHHHHHHHHHHH
Q 000775 471 LTLSFFFKFFLWVS 484 (1291)
Q Consensus 471 la~~l~~r~l~~~~ 484 (1291)
|+.+|++|++.++.
T Consensus 307 l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 307 VLLAIARRLVDQLW 320 (321)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 20
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=100.00 E-value=5.2e-52 Score=467.58 Aligned_cols=261 Identities=22% Similarity=0.332 Sum_probs=241.6
Q ss_pred cCCHHHHHHHHhcCCCcEEEEccchhhHHHHhc-CCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhh
Q 000775 197 PLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLK-RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVT 275 (1291)
Q Consensus 197 P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~-~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~ 275 (1291)
|+||+||+++|+++|+++++|||||+++.++.+ ...|+++|||++|+||++|+.++++|+|||+|||++|+++ +.+.
T Consensus 1 P~sl~ea~~ll~~~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~--~~i~ 78 (264)
T TIGR03199 1 PAALDEAWSLLEKAPDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKN--PLIK 78 (264)
T ss_pred CCCHHHHHHHHHhCCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhC--hHhH
Confidence 899999999999999999999999999999877 4668999999999999999999999999999999999975 4443
Q ss_pred cCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccCcccc
Q 000775 276 ERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 355 (1291)
Q Consensus 276 ~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~~~t~ 355 (1291)
+.+|.|+++++.|||+||||+||||||||++ .||++|+|+||||+|+|.+ +| +|+||++|||++ ++
T Consensus 79 -------~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~sD~~p~Llal~A~v~i~~-~g-~r~vp~~~f~~~---~~ 144 (264)
T TIGR03199 79 -------RALPCFVDAASAIAAPGVRNRATIGGNIASG--IGDFIPALLVLGAELIVYQ-KE-LIRLPLGAWLSE---ED 144 (264)
T ss_pred -------hHhHHHHHHHHHhcCHHHhcceecHHhccCc--ccchHHHHHHcCCEEEEEe-CC-EEEEEHHHhhhc---cC
Confidence 3789999999999999999999999999998 7999999999999999999 88 999999999984 58
Q ss_pred CCCceEEEEEEe-cCCCCCcceEEEEEeecCccchhhcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHHHHHHHc
Q 000775 356 LTSGEILLSIFL-PWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIV 434 (1291)
Q Consensus 356 L~~~Eii~~I~i-P~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~ 434 (1291)
|.++|||++|+| |.+..+..+.+||+.+|.++++++||+|+.+++++++ +|+++||+|||++++|+|+.++|++|.
T Consensus 145 l~~~Eii~~I~i~p~~~~~~~~~~~k~~~R~~~~~a~v~~a~~~~~~~~~---~i~~~ria~Ggv~~~p~r~~~~E~~L~ 221 (264)
T TIGR03199 145 FKPTAIVTRVIIGPRAETGEFVFYHKVGRRETFTGSLVVVAGRFLLDGSQ---TIKEIRLAVGGADITPRRLLDSEAKLM 221 (264)
T ss_pred CCCCcEEEEEEEECCCCCCCcEEEEEEeccchhHHHHheeeEEEEEcCCC---eEEEEEEEeecCCCceeeHHHHHHHhc
Confidence 999999999999 6654556778889999999999999999999997656 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Q 000775 435 GKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFF 477 (1291)
Q Consensus 435 Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~ 477 (1291)
|++|++++++++.+.+.+++.|.+ ++++|++||++|+++|+.
T Consensus 222 G~~~~~~~~~~a~~~~~~~~~p~~-d~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 222 APPWDPHLLAELYKTIIQELPFSS-DPFATAAYRKKVAANVIV 263 (264)
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCC-CCCCCHHHHHHHHHHHhc
Confidence 999999999999999999998666 469999999999999974
No 21
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
Probab=100.00 E-value=3.9e-51 Score=453.67 Aligned_cols=278 Identities=28% Similarity=0.411 Sum_probs=255.1
Q ss_pred CeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCe-EEEcccCcHHHHHHH
Q 000775 191 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG-LEIGAAVRLTELLKM 269 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~-l~IGA~vTl~~l~~~ 269 (1291)
.++|++|+|++||+.+|+++++++++||||+|...+|.+...|.++|||++|+|++.+...+++ |+|||+||+++|.++
T Consensus 3 ~f~y~rp~Sv~eA~~ll~~~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ei~~~ 82 (284)
T COG1319 3 NFEYYRPASVEEALNLLARAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLTEIARH 82 (284)
T ss_pred ceEEECCCCHHHHHHHHHhCCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHHHHHhC
Confidence 5799999999999999999899999999999999999999999999999999988888776555 999999999999987
Q ss_pred hhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhc
Q 000775 270 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 349 (1291)
Q Consensus 270 l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~ 349 (1291)
+.++. .+|.|.+++..+||+||||+||||||||+++|.+|++|+|+||||+|++.+..| +|++|+++||.
T Consensus 83 --~~~~~-------~~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~aD~~~aLlaLdA~v~~~~~~g-~r~i~~~~f~~ 152 (284)
T COG1319 83 --PAVRR-------IPPALSEAASAIASPQVRNRATIGGNLCNADPAADLAPALLALDAEVEIRSPGG-ERTIPIEDFFR 152 (284)
T ss_pred --hhhhh-------hchHHHHHHHHhcChhhcceeeecchhccCCCchhhHHHHHHcCCEEEEecCCc-cEEEEHHHhhc
Confidence 55554 688999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCccccCCCceEEEEEEecCCCCCcceEEEE-EeecCccchhhcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHH
Q 000775 350 GYRKVDLTSGEILLSIFLPWTRPFEFVKEFK-QAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKK 428 (1291)
Q Consensus 350 g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K-~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~ 428 (1291)
|++.|.|++|||||+|.||.++ ...+.+|| +.+|...+++.|++|..++.+ +|+++||++||++++|+|+.+
T Consensus 153 ~p~~t~l~~gelit~v~lP~~~-~~~~~~~kk~r~r~~~~~~~vsvA~~~~~~------~v~~~RvAlgg~a~~p~R~~~ 225 (284)
T COG1319 153 GPGETALEPGELITAVILPPPP-AARGAYYKKVRRRASFAIALVSVAAKLRGD------RVSEARVALGGVAPKPWRLED 225 (284)
T ss_pred CccccccCCCcEEEEEEcCCCc-cCCccEEEEeecchhhhHHHHHHHhhhccc------ceeeeeeeecccCCcceehHH
Confidence 9999999999999999999983 33345554 456778899999999877643 689999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 000775 429 TKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 486 (1291)
Q Consensus 429 ~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~ 486 (1291)
+|+.|.|+++++++++++.+...+++.|.+ ++++|++||++|+++++.|.+.++..+
T Consensus 226 ~E~~L~~~~l~~~~~~~~~~~~~~~~~p~~-d~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 226 AEAALLGKPLSLETLEAAAEAAMQEAAPIS-DVRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred HHHHhhCCCCChHHHHHHHHHhhcccCCcc-cccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999998776 579999999999999999999998764
No 22
>PRK09799 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.1e-47 Score=429.21 Aligned_cols=250 Identities=20% Similarity=0.338 Sum_probs=221.4
Q ss_pred EEEecCCHHHHHHHHhcCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHhh
Q 000775 193 KWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 271 (1291)
Q Consensus 193 ~~~~P~sl~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 271 (1291)
+|++|+|++||+++|++++ +++++||||||++.+ +...++++|||++| ||++|+.++++|+|||+|||+++.++.
T Consensus 4 ~y~~P~sl~Ea~~ll~~~~~~a~ilAGGT~L~~~~--~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~~- 79 (258)
T PRK09799 4 QFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATP--TRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDAR- 79 (258)
T ss_pred cEeCCCCHHHHHHHHHhCCCCCEEEecCCChHhhh--CCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhCc-
Confidence 7999999999999999995 699999999998864 44567899999999 999999999999999999999998862
Q ss_pred hhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhccC
Q 000775 272 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 351 (1291)
Q Consensus 272 ~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g~ 351 (1291)
.++ +.|.++++.+||+||||+||||||||+++|.||++|+|+||||+|+|.+. |++|++|||.|+
T Consensus 80 -~~~----------~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~sD~~p~LlAldA~v~l~~~----r~vpl~~f~~g~ 144 (258)
T PRK09799 80 -FIP----------AALREALGFVYSRHLRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNG----ETLSIEDYLACP 144 (258)
T ss_pred -ccH----------HHHHHHHHHhCCHHHhccchhHHHhhcCCccHHHHHHHHHcCCEEEEecC----cEEeHHHhcCCC
Confidence 121 27999999999999999999999999999999999999999999999873 789999999983
Q ss_pred ccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchhhcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHHHHH
Q 000775 352 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 431 (1291)
Q Consensus 352 ~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~ 431 (1291)
++|||++|.||.+. ..+.+||+. |+.+|+|+||+|+.++++ + .+||+|||++++|+|++++|+
T Consensus 145 ------~~Eil~~I~iP~~~--~~~~~~K~~-r~~~~~a~v~~A~~~~~~-~-------~~ria~Ggv~~~p~r~~~~E~ 207 (258)
T PRK09799 145 ------CDRLLTEIIIPDPY--RTCATRKIS-RSQAGLTVVTAAVALTDH-D-------GMRIALDGVASKPLRLHDVEK 207 (258)
T ss_pred ------CCcEEEEEEcCCCC--CcceEEEec-ccccChhhheeEEEEEEc-C-------CeEEEEECCCCcccchHHHhc
Confidence 79999999999764 345677885 889999999999998875 2 389999999999999999998
Q ss_pred HHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 000775 432 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 486 (1291)
Q Consensus 432 ~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~ 486 (1291)
++++++++.+++ .+++.|.++ .++|++||++++++|+.|+|.++.+.
T Consensus 208 ----~~~~~~~~~~a~---~~~~~p~~d-~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 208 ----QNLEGNALEQAV---ANAIFPQED-LRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred ----CCCCHHHHHHHH---HhcCCCCcc-CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999988764 466766555 49999999999999999999998764
No 23
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=100.00 E-value=2.2e-47 Score=426.13 Aligned_cols=252 Identities=19% Similarity=0.314 Sum_probs=220.4
Q ss_pred eEEEecCCHHHHHHHHhcCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHh
Q 000775 192 LKWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 270 (1291)
Q Consensus 192 ~~~~~P~sl~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 270 (1291)
.+|++|+|++||+++|++++ +++++||||||++.++ ...++++|||++| ||++|+.++++|+|||+||+++|+++
T Consensus 2 ~~y~~P~sl~Ea~~ll~~~~~~a~~lAGGTdL~~~~~--~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~~- 77 (257)
T TIGR03312 2 EQFFRPESTIQALELKKRHTGVAVWFAGGSKLNATPT--RTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLIDN- 77 (257)
T ss_pred CceECCCCHHHHHHHHHhCCCCCEEEecCcchhhhhc--ccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHhC-
Confidence 37999999999999999985 6999999999987654 3456899999999 99999999999999999999999886
Q ss_pred hhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhcc
Q 000775 271 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG 350 (1291)
Q Consensus 271 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g 350 (1291)
+.++ +.|.++++.+|++||||+||||||||+++|.||++|+|+||||+|+|.+. |+||++|||.|
T Consensus 78 -~~~~----------~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~~D~~~~LlaldA~v~l~~~----r~vp~~dF~~g 142 (257)
T TIGR03312 78 -ELTP----------AALKEALGFVYSRHIRNQATIGGEIAAFQSESLLLPVLLALKATVVLANA----SQMDIEDYLAS 142 (257)
T ss_pred -cchH----------HHHHHHHHHhCCHHHhccccHHHHhhcCCCchHHHHHHHHcCCEEEEecC----cEEeHHHhcCC
Confidence 2222 26999999999999999999999999999999999999999999999865 78999999998
Q ss_pred CccccCCCceEEEEEEecCCCCCcceEEEEEeecCccchhhcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHHHH
Q 000775 351 YRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTK 430 (1291)
Q Consensus 351 ~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E 430 (1291)
+ ++|||++|+||.+. ..+.++|+ .|+..|||+|++|+.++++ + ++||++||++++|+|+.++|
T Consensus 143 ~------~~Ell~~V~iP~~~--~~~~~~k~-~R~~~~~a~v~~A~~~~~~-~-------~~ria~ggv~~~p~r~~~~E 205 (257)
T TIGR03312 143 E------QRELIVEVIIPNPN--LMCATRNI-SRSAAGLAVVTAAVAVDQK-G-------NMRIALDGVSPVPVRLRDVE 205 (257)
T ss_pred C------CCcEEEEEEcCCCC--CCceEEEe-cCcccchhhheeEEEEEec-C-------CEEEEEEccCCceeehHHHh
Confidence 4 69999999999763 34566788 7999999999999998875 2 28999999999999999999
Q ss_pred HHHcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 000775 431 TFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 487 (1291)
Q Consensus 431 ~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~~ 487 (1291)
+. .++++.++++ +.+++.|.+| .++|++|||+|+++|++|++.++.+-.
T Consensus 206 ~~----~~~~~~~~~~---~~~~~~p~~D-~r~sa~YRr~~~~~l~~r~l~~~~~~~ 254 (257)
T TIGR03312 206 AQ----DLKGEALEQA---VADAIHPVAD-LCGSVAYKRYIAGVVVADLLAECQQLA 254 (257)
T ss_pred hC----cCCHHHHHHH---HHhcCCCCCC-CcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 85 6777887654 5577775554 699999999999999999999987643
No 24
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain. They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B ....
Probab=100.00 E-value=3.2e-40 Score=347.83 Aligned_cols=170 Identities=40% Similarity=0.666 Sum_probs=151.5
Q ss_pred CeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHh
Q 000775 191 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 270 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 270 (1291)
.++|++|+|++||+++++.+++++++||||+++++++.+...|+.+|||++|+||++|+.++++|+|||+||+++++++
T Consensus 2 ~~~~~~P~sl~ea~~ll~~~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~- 80 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLAKGPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSELEES- 80 (171)
T ss_dssp S-EEEE-SSHHHHHHHHHHGTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHHHHHH-
T ss_pred CeEEEccCCHHHHHHHHhcCCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHHHhhc-
Confidence 6799999999999999998899999999999999999998889999999999999999999999999999999999998
Q ss_pred hhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChHHHHHhcCCEEEEEeCCCcEEEEEhHhHhcc
Q 000775 271 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG 350 (1291)
Q Consensus 271 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~dF~~g 350 (1291)
+.+. +.+|.|+++++++|++||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|++|++|||.|
T Consensus 81 -~~~~-------~~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~sD~~~~Llal~A~v~i~~~~g-~r~~~~~~f~~g 151 (171)
T PF00941_consen 81 -PLIQ-------QYFPALAQAARRIASPQIRNRATIGGNLCNASPASDLAPALLALDARVEIASPDG-TRTVPLEDFFTG 151 (171)
T ss_dssp -HHHH-------HHHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT-SHHHHHHHTT-EEEEEETTE-EEEEEGGGGEEC
T ss_pred -chhh-------hhHHHHHHHHHHhCCHhHeeeeeeccccccCcccccHHHHHHHhCcEEEEEcCCe-eEEEEHHHhcCc
Confidence 4444 4899999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CccccCCCceEEEEEEecCC
Q 000775 351 YRKVDLTSGEILLSIFLPWT 370 (1291)
Q Consensus 351 ~~~t~L~~~Eii~~I~iP~~ 370 (1291)
+++++|+++|||++|+||++
T Consensus 152 ~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 152 PRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp TTEESS-TTEEEEEEEEES-
T ss_pred cccccCCCCcEEEEEECCCC
Confidence 99999999999999999975
No 25
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=100.00 E-value=2.6e-35 Score=294.83 Aligned_cols=95 Identities=40% Similarity=0.746 Sum_probs=91.8
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhCc
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGN 82 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~gn 82 (1291)
++||||++|+.+++|++|+|||||+ ..+.+||+|+||+++|++|||||||||||++++||+++|+| +++||+++|+||
T Consensus 53 ~~v~SCl~~~~~~~G~~V~TiEgl~-~~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~~~p~p-s~~ei~~al~Gn 130 (148)
T TIGR03193 53 RPRLACSTLAHRVAGRKVETVEGLA-TNGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRRNPSP-SRDEIRAALAGN 130 (148)
T ss_pred eEeeccHhhHhhcCCCcEEEeCCCC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCC
Confidence 6899999999999999999999998 56689999999999999999999999999999999999999 999999999999
Q ss_pred ccccCCChhHHHHHHHH
Q 000775 83 LCRCTGYRPIVDAFRVF 99 (1291)
Q Consensus 83 lCrCtgy~~i~~a~~~~ 99 (1291)
|||||||++|++|++.+
T Consensus 131 LCRCTGY~~I~~Av~~a 147 (148)
T TIGR03193 131 LCRCTGYVKIIESVEAA 147 (148)
T ss_pred ccCCCCCHHHHHHHHHh
Confidence 99999999999999875
No 26
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=100.00 E-value=9.7e-35 Score=293.50 Aligned_cols=96 Identities=39% Similarity=0.843 Sum_probs=92.1
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhCc
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGN 82 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~gn 82 (1291)
++|+||++|+.+++|++|+|||||+ .+.+||||+||+++|++|||||||||||++++||+++|+| +++||+++|+||
T Consensus 55 ~~v~SCl~~~~~~~G~~v~TiEgl~--~~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~~p~p-~~~ei~~al~gn 131 (151)
T TIGR03198 55 KLANACLTMAYQADGHEITTIEGIA--ENELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQP-SDEDMEEGLSGN 131 (151)
T ss_pred cEEechHHHHHHhcCCEEEecCCcC--CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCC
Confidence 5899999999999999999999997 3579999999999999999999999999999999999999 999999999999
Q ss_pred ccccCCChhHHHHHHHHHh
Q 000775 83 LCRCTGYRPIVDAFRVFAK 101 (1291)
Q Consensus 83 lCrCtgy~~i~~a~~~~~~ 101 (1291)
|||||||++|++|++++++
T Consensus 132 lCRCtgY~~I~~Av~~~~~ 150 (151)
T TIGR03198 132 LCRCTGYGGIIRSACRIRR 150 (151)
T ss_pred CcCCCCCHHHHHHHHHHhc
Confidence 9999999999999998864
No 27
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=100.00 E-value=1.6e-34 Score=292.06 Aligned_cols=97 Identities=39% Similarity=0.697 Sum_probs=90.8
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCC-CCCHHHHHHHhhC
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQT-PPTEEQIEESLAG 81 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~-~~~~~~i~~~~~g 81 (1291)
++||||++|+.+++|++|+|||||+ ..+.+||||+||+++|++|||||||||||++++||++++. |++++||+++|+|
T Consensus 59 ~~v~SCl~~a~~~~G~~V~TiEGl~-~~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~~~~~~~s~~eI~~al~G 137 (159)
T PRK09908 59 TAIDSCLYLAAWAEGKEIRTLEGEA-KGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAG 137 (159)
T ss_pred cEeehhHhhHHHhCCCEEEeecCCC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCCCHHHHHHHHcC
Confidence 6899999999999999999999998 5678999999999999999999999999999999999863 3399999999999
Q ss_pred cccccCCChhHHHHHHHHH
Q 000775 82 NLCRCTGYRPIVDAFRVFA 100 (1291)
Q Consensus 82 nlCrCtgy~~i~~a~~~~~ 100 (1291)
||||||||++|++|++.+-
T Consensus 138 NlCRCTGY~~I~~Av~~~~ 156 (159)
T PRK09908 138 NLCRCTGYQMIVNTVLDCE 156 (159)
T ss_pred CccCCCCCHHHHHHHHHHh
Confidence 9999999999999998664
No 28
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=100.00 E-value=8.2e-34 Score=282.77 Aligned_cols=99 Identities=46% Similarity=0.854 Sum_probs=94.2
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhCc
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGN 82 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~gn 82 (1291)
++||||++|+.+++|++|+|||||+.++..|||+|+||+++++.|||||||||||++++||++++.| |++||+++|+||
T Consensus 55 ~~v~SCl~~a~~~~G~~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~~~~p-s~~eI~~~lsGn 133 (156)
T COG2080 55 EAVNSCLTLAVQAEGAEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDRNPAP-TDEEIREALSGN 133 (156)
T ss_pred eEehHHHHHHHHhCCCeEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHhCCCC-CHHHHHHHHhcC
Confidence 6899999999999999999999998445668999999999999999999999999999999999999 999999999999
Q ss_pred ccccCCChhHHHHHHHHHhc
Q 000775 83 LCRCTGYRPIVDAFRVFAKT 102 (1291)
Q Consensus 83 lCrCtgy~~i~~a~~~~~~~ 102 (1291)
|||||||.+|++|++.++..
T Consensus 134 lCRCt~Y~~I~~Ai~~aa~~ 153 (156)
T COG2080 134 LCRCTGYQNIVAAILDAAER 153 (156)
T ss_pred ccccCCHHHHHHHHHHHHHH
Confidence 99999999999999988753
No 29
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=99.98 E-value=9e-33 Score=292.28 Aligned_cols=98 Identities=38% Similarity=0.758 Sum_probs=92.7
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHc---------------CC
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRS---------------SQ 67 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~---------------~~ 67 (1291)
+++|||++|+.+++|++|+|||||+ ..+.+||+|+||+++|++|||||||||||++++||++ +|
T Consensus 103 ~~v~SCl~la~~~~G~~ItTiEGL~-~~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~~~~~~~~~~~~p 181 (217)
T PRK11433 103 RRLNACLTLAVMHQGAEITTIEGLG-SPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAP 181 (217)
T ss_pred EEeeeeeeehhhcCCCEEEEeCCcC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccCccccccccccCC
Confidence 5799999999999999999999998 5678999999999999999999999999999999998 67
Q ss_pred CCCCHHHHHHHhhCcccccCCChhHHHHHHHHHhc
Q 000775 68 TPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKT 102 (1291)
Q Consensus 68 ~~~~~~~i~~~~~gnlCrCtgy~~i~~a~~~~~~~ 102 (1291)
.| +++||+++|+|||||||||++|++|+++++..
T Consensus 182 ~p-t~~eIrealsGNlCRCtgY~~Iv~Av~~~a~~ 215 (217)
T PRK11433 182 EL-TADEIRERMSGNICRCGAYSNILEAIEDVAGE 215 (217)
T ss_pred CC-CHHHHHHHHcCCccCCCCcHHHHHHHHHHHhc
Confidence 78 99999999999999999999999999988753
No 30
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.97 E-value=2.5e-31 Score=237.20 Aligned_cols=75 Identities=61% Similarity=1.136 Sum_probs=64.4
Q ss_pred EeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhCcccccCCChhHHHHHHH
Q 000775 22 TVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 98 (1291)
Q Consensus 22 Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~gnlCrCtgy~~i~~a~~~ 98 (1291)
|||||+ +++.+||||++|+++|++|||||||||||++++||+++++| +++||+++|+|||||||||++|++|+++
T Consensus 1 TvEGl~-~~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~~~~p-~~~ei~~al~gnlCRCTgY~~I~~Av~~ 75 (75)
T PF01799_consen 1 TVEGLA-SDGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRRNPDP-TEEEIREALSGNLCRCTGYRPIVEAVRQ 75 (75)
T ss_dssp -GGGSS-BTTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHHSSS--CHHHHHHHTTTS--SSSTSHHHHHHHH-
T ss_pred CcCcCC-CCCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhcccch-hhHHHHHHHHcCccCCCCcHHHHHHHhC
Confidence 899997 68899999999999999999999999999999999999999 9999999999999999999999999974
No 31
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.95 E-value=1.3e-28 Score=240.40 Aligned_cols=107 Identities=50% Similarity=0.674 Sum_probs=91.9
Q ss_pred ceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCCCCC--CCcc--ccccccCeEe
Q 000775 542 TGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGP--VVAD--EELFASEVVT 617 (1291)
Q Consensus 542 tG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~~~~--~~~d--~~~la~~~V~ 617 (1291)
||+++|++|+++ |||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.+..+. ...+ +++|++++|+
T Consensus 1 TG~a~Y~~Di~~-~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip~~~~~~~~~~~~~~~~~~la~~~V~ 79 (111)
T PF01315_consen 1 TGEARYVDDIPP-PGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIPGINPNGGLPIPHDEPQPVLADDKVR 79 (111)
T ss_dssp TT-S-BGGGSCS-TTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHSSGSEESCSCSTTSSEEESS-SSEES
T ss_pred CcCeEcccccCC-CCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccCccccCccccccCCCceEeccCCeEe
Confidence 899999999998 8999999999999999999999999999999999999999998765543 3334 4799999999
Q ss_pred ecCCeEEEEEECCHHHHHHhccccceeEeecC
Q 000775 618 CVGQVIGVVVAETHEEAKLASRKVQVEYEELP 649 (1291)
Q Consensus 618 y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp 649 (1291)
|+|||||+|||+|+++|++|+++|+|+||+||
T Consensus 80 y~GqpVa~VvAet~~~A~~Aa~~V~V~Ye~lp 111 (111)
T PF01315_consen 80 YVGQPVALVVAETREAARDAAELVKVEYEELP 111 (111)
T ss_dssp STT-EEEEEEESSHHHHHHHHHT-EEEEEE--
T ss_pred ECCCeEEEEEECCHHHHHHHhcCcEEEeEeCC
Confidence 99999999999999999999999999999987
No 32
>PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO]. The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: CO + H2O = CO2 + 2e + 2H+ Subunit S represents the iron-sulphur protein of CO dehydrogenase and is clearly divided into a C- and an N-terminal domain, each binding a [2Fe-2S] cluster [].; PDB: 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B 3UNI_A 3AMZ_A ....
Probab=99.73 E-value=2e-17 Score=160.30 Aligned_cols=102 Identities=26% Similarity=0.432 Sum_probs=95.5
Q ss_pred EEEEeecCccchhhcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCC
Q 000775 378 EFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILK 457 (1291)
Q Consensus 378 ~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~ 457 (1291)
+||+.+|.++|++++|+|+.+.+++++ +|+++||++||++++|+|+.++|++|.|++|++++++++.+.+.+++.|.
T Consensus 2 ayk~~~R~~~d~a~v~~a~~~~~~~~~---~i~~~ria~g~v~~~p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~~~~~ 78 (103)
T PF03450_consen 2 AYKIGRRKANDIAIVNVAVLVSVDDDG---RIEDARIAVGGVAPTPVRAEEVEAALIGKPLSEETLEEAAEAVSEEIDPI 78 (103)
T ss_dssp EEEESSSSSSSSSSEEEEEEEEEETTS---EEEEEEEEEESSSSSTEE-HHHHHHTTTSBSSHHHHHHHHHHHHHHTHHC
T ss_pred CeeccCccccHHHHHhhhheEEEecCc---eEEEEEEEEeccccceeehHHHHHHHhhcchhhhhHHHHHHHHHhcCCCC
Confidence 569999999999999999999999877 99999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 000775 458 EDAPGGMVDFRKSLTLSFFFKFFLWV 483 (1291)
Q Consensus 458 ~~~~~~s~~YR~~la~~l~~r~l~~~ 483 (1291)
++ .++|++||++|+.+|++|+|.++
T Consensus 79 ~d-~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 79 SD-MRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp TT-TTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 66 68999999999999999999874
No 33
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=99.55 E-value=2.8e-15 Score=191.05 Aligned_cols=473 Identities=16% Similarity=0.096 Sum_probs=289.8
Q ss_pred cCCCCccC-CcccccCcccccceeeeccccCCCCCCcEEEEEEeCCCCCeEEEeeecccccCCCCEEEEEecCCCCCCCC
Q 000775 522 TKHGTSVG-SPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 600 (1291)
Q Consensus 522 ~~~~~~iG-k~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~vvt~~Dip~~n~ 600 (1291)
+..+.++| +..++ |+. ++|+.+.|..|..+ ++||++.|.+++..-..|.. |...+...++++.+...
T Consensus 179 ~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~~~-~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~~-------- 246 (731)
T COG1529 179 PNPMEPHGVVAVPD-DGD-KLTVWASTQIPHRL-RGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEEI-------- 246 (731)
T ss_pred ccCcccccceeeEc-CCC-eEEEEEccCCchHH-HHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHHH--------
Confidence 36678899 67888 777 99999999999998 89999999955555444544 88888887776443322
Q ss_pred CCCCCccccccccCeEeecCCeEEEEEECCHHHHHHhccccceeEeecC-CCCCHHHHH-hcCCCCCC-CcceeecCC--
Q 000775 601 IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELP-AILSIQEAI-DAKSFHPN-TERCFRKGD-- 675 (1291)
Q Consensus 601 ~~~~~~d~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~lV~V~ye~lp-~v~~~~~A~-~~~~~~~~-~~~~~~~Gd-- 675 (1291)
.+-.-..-.|-||.++- ..+...+.....+ ...+.+-+. +++.+... .......|+
T Consensus 247 ----------~~~~aa~~~grpVk~~~---------tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~ 307 (731)
T COG1529 247 ----------LAALAAVVAGRPVKWIE---------TREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN 307 (731)
T ss_pred ----------HHHHHHHhcCCCeEEec---------chHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc
Confidence 11111112233443332 2222223211111 111111111 11111000 011122333
Q ss_pred ---cccccc-cCCCceEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000775 676 ---VDICFQ-SGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 751 (1291)
Q Consensus 676 ---v~~af~-~~~a~~vve~~~~~~~~~H~~mEp~~a~a~~~~e~g~l~V~~stQ~p~~~~~~vA~~Lglp~~kV~V~~~ 751 (1291)
+...+. .....+.++..|..++..|..||| ++..... ++. ..||.+...+..+|+.|||++.+||++..
T Consensus 308 ~~~~~~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p-~~~~Rg~--g~~----~~~~a~E~~~d~lA~~Lgidp~eiR~~n~ 380 (731)
T COG1529 308 GPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPP-NGAYRGA--GRP----EGTFALERAVDELAEELGIDPVEIRLRNL 380 (731)
T ss_pred ccchhHHHHHhcCCceecccceeeeEEEEcCCCC-CcccccC--CCc----hhHHHHHHHHHHHHHHhCCCHHHHhhhhc
Confidence 222220 033457999999999999999999 6666543 222 89999999999999999999999999999
Q ss_pred ccCCCCC-CCCCcchHHHHHHHHHHHhCC---CCEEEEechHHHHhhcCCCCCeEEE--------EEEEECCCCcEEEEE
Q 000775 752 RIGGGFG-GKETRSAFIAAAAAVPSFLLN---RPVNLTLDRDIDMMISGQRHSFLGK--------YKVGFTNEGKVLALD 819 (1291)
Q Consensus 752 ~vGGgFG-gK~~~~~~~a~~aAlaA~~~g---rPVkl~~sR~e~~~~~~~R~~~~~~--------~k~g~~~dG~i~a~~ 819 (1291)
.-+|+|| ++......+...+..++++++ ||+|..|+|++++..+..+.-.... .++-++.||++....
T Consensus 381 ~~~g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~ 460 (731)
T COG1529 381 IRGGPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRT 460 (731)
T ss_pred cccCCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEE
Confidence 9999999 554444456666778888887 9999999999998866555444332 444556677776654
Q ss_pred EEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHhHHHHHHHHHHHHcCCCHHH
Q 000775 820 LEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEE 899 (1291)
Q Consensus 820 ~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e 899 (1291)
... +.|-- ....+. ....-.|.||+-+++.....|..++ .+||++|+..+.|+.|.+++++++..++||..
T Consensus 461 g~~--~~G~G---~~t~~~---q~~ae~lgip~~~V~v~~gDt~~~~-~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~ 531 (731)
T COG1529 461 GAT--DIGQG---TDTVLA---QIAAEELGIPPDDVEVVHGDTDVPV-GGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVA 531 (731)
T ss_pred CCc--cCCCc---HHHHHH---HHHHHHhCCCHHHEEEEecCCCCCC-CCCCCcCcccccchHHHHHHHHHHHHHHHHHH
Confidence 332 11211 011111 2234679999999998889998775 78999999999999999999999999999999
Q ss_pred HHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhhHhHhhhhccCcccccceEEEeeeeccccccccCCceeEE
Q 000775 900 IREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGAL 979 (1291)
Q Consensus 900 ~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~ 979 (1291)
+|+..-.... +..|+....+..|..+...+......++-+.+|+++.. .|+.... ......-++
T Consensus 532 aa~~l~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~-~~~~A~~~E 595 (731)
T COG1529 532 AARMLGADAE--------------DVVLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVAA-SFGSDNT-YPYGAHIAE 595 (731)
T ss_pred HHhhhCCChh--------------HeeeccCeeeeccCCccceeeHHHhhhccccCcccccc-ccccccc-ccceeEEEE
Confidence 9987622111 11444555555564321100000001111346666642 2222110 001234588
Q ss_pred EEEe-cCCeEEEE--EcCccCCcchHHHH---------HHHHHHHh--------------------------CCCcccEE
Q 000775 980 VHVY-TDGTVLVT--HGGVEMGQGLHTKV---------AQVAASAF--------------------------NIPLSSVF 1021 (1291)
Q Consensus 980 V~i~-~DGsV~V~--~g~~e~GqG~~T~~---------~qiaAe~L--------------------------gip~~~V~ 1021 (1291)
|+|+ .+|+|.|. ....|.|.=++=++ .|=....| .+|.-.|+
T Consensus 596 V~Vd~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~iev~ 675 (731)
T COG1529 596 VEVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPEVEVE 675 (731)
T ss_pred EEEECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCceEEE
Confidence 9999 58988885 56667775433321 12122222 24555566
Q ss_pred EecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHH
Q 000775 1022 VSETSTDKVPNASPTAASASSDIYGAAVLDACEQIK 1057 (1291)
Q Consensus 1022 v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~ 1057 (1291)
+++......|.+....|=-++.-...|+.+|-..+-
T Consensus 676 ~v~~p~~~~p~g~kGvGE~g~~~~~pAvaNAV~~At 711 (731)
T COG1529 676 FVESPSPFGPLGAKGVGEGGIIGIAPAIANAVFDAT 711 (731)
T ss_pred EecCCCCCCCCCCCCcCcCccCchhHHHHHHHHHHh
Confidence 665443334666666666677777888888887763
No 34
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.14 E-value=0.0025 Score=73.44 Aligned_cols=157 Identities=18% Similarity=0.145 Sum_probs=101.0
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhcC---CCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcc
Q 000775 183 PLNLSGFGGLKWYRPLKLQHLLELKSKY---PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 259 (1291)
Q Consensus 183 ~~~~~~~~~~~~~~P~sl~eal~ll~~~---~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA 259 (1291)
++.+ |..-.-|+.|+|.+|+.++++.. -...++.|||.+++. .. ..+..+|.+++ |+.|+.+++.+++||
T Consensus 27 t~~i-GG~A~~~v~p~s~eel~~~~~~~~~~~p~~vlG~GSNlLv~--d~-g~~gvVI~l~~---~~~i~i~~~~v~v~A 99 (297)
T PRK14653 27 SFKI-GGPVPLFAIPNSTNGFIETINLLKEGIEVKILGNGTNVLPK--DE-PMDFVVVSTER---LDDIFVDNDKIICES 99 (297)
T ss_pred Eeee-CcEEEEEEecCCHHHHHHHHHHHhcCCCEEEEcCCeeEEEe--cC-CccEEEEEeCC---cCceEEeCCEEEEeC
Confidence 4555 55456789999999999877521 237899999999873 22 12367888755 567777778999999
Q ss_pred cCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccc-cCCC-CChHHHHHhcCCEEEEEeCCC
Q 000775 260 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASPI-SDLNPLWMASGAKFHIVDCKG 337 (1291)
Q Consensus 260 ~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~-asp~-sD~~p~Llal~A~v~l~s~~g 337 (1291)
++++.+|...+.+ ..+. . +..++.. =|||||++++ |.-. .++.=.+. +|++.+ +|
T Consensus 100 G~~l~~L~~~~~~--~GL~--------G----lE~l~gI----PGTVGGAv~mNAGayG~ei~d~l~----~V~~~d-~g 156 (297)
T PRK14653 100 GLSLKKLCLVAAK--NGLS--------G----FENAYGI----PGSVGGAVYMNAGAYGWETAENIV----EVVAYD-GK 156 (297)
T ss_pred CCcHHHHHHHHHH--CCCc--------c----hhhhcCC----chhHHHHHHHhCccCchhhheeEE----EEEEEC-CC
Confidence 9999999987432 1221 1 2223443 3789999864 3221 22332333 666666 34
Q ss_pred cEEEEEhHhHhccCccccCCCc--eEEEEEEecC
Q 000775 338 NIRTTMAEEFFLGYRKVDLTSG--EILLSIFLPW 369 (1291)
Q Consensus 338 ~~R~vpl~dF~~g~~~t~L~~~--Eii~~I~iP~ 369 (1291)
+.++++-+|.--+||...++.. -||+++.+..
T Consensus 157 ~v~~~~~~e~~f~YR~S~~~~~~~~iI~~a~f~L 190 (297)
T PRK14653 157 KIIRLGKNEIKFSYRNSIFKEEKDLIILRVTFKL 190 (297)
T ss_pred EEEEEchhhccccCccccCCCCCcEEEEEEEEEE
Confidence 3677888887777877766542 2666666544
No 35
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.12 E-value=0.0029 Score=73.24 Aligned_cols=158 Identities=14% Similarity=0.197 Sum_probs=98.0
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhc---CC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEc
Q 000775 183 PLNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 258 (1291)
Q Consensus 183 ~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IG 258 (1291)
++.+ +....-++.|+|.+|+.++++. +. ...++.|||.+.+. .+ ..+..+|++++. +..|..+++.+++|
T Consensus 29 t~~i-gg~a~~~v~p~~~edl~~~v~~a~~~~ip~~vlGgGSNllv~--d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~ 102 (302)
T PRK14652 29 AVRV-GGPADLLVRPADPDALSALLRAVRELGVPLSILGGGANTLVA--DA-GVRGVVLRLPQD--FPGESTDGGRLVLG 102 (302)
T ss_pred Eeec-CCcceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcceeec--CC-CEeeEEEEecCC--cceEEecCCEEEEE
Confidence 4555 5445678999999999887752 22 47889999998642 22 123678998752 55677777899999
Q ss_pred ccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccC--CCCChHHHHHhcCCEEEEEeCC
Q 000775 259 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS--PISDLNPLWMASGAKFHIVDCK 336 (1291)
Q Consensus 259 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~as--p~sD~~p~Llal~A~v~l~s~~ 336 (1291)
|++++.+|.+.+.+. .+. . +...++.+ ||+||++++-. ..+++.=.+. .|++...+
T Consensus 103 AG~~~~~L~~~~~~~--GL~--------G----lE~l~gIP----GTvGGav~mNaGa~ggei~d~v~----~v~vv~~~ 160 (302)
T PRK14652 103 AGAPISRLPARAHAH--GLV--------G----MEFLAGIP----GTLGGAVAMNAGTKLGEMKDVVT----AVELATAD 160 (302)
T ss_pred CCCcHHHHHHHHHHc--CCc--------c----cccccCCC----cchhHHHHHcCCCCceEhhheEE----EEEEECCC
Confidence 999999999875331 111 1 11222222 69999997542 2222222222 44555566
Q ss_pred CcEEEEEhHhHhccCccccCCCceEEEEEEecC
Q 000775 337 GNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPW 369 (1291)
Q Consensus 337 g~~R~vpl~dF~~g~~~t~L~~~Eii~~I~iP~ 369 (1291)
| .++++-+|..-+||...++.+-||+++.+..
T Consensus 161 G-~~~~~~~e~~f~YR~s~~~~~~II~~a~~~L 192 (302)
T PRK14652 161 G-AGFVPAAALGYAYRTCRLPPGAVITRVEVRL 192 (302)
T ss_pred C-cEEeehhhcCcccceeccCCCeEEEEEEEEE
Confidence 6 6677777766667665554444555555543
No 36
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=96.76 E-value=0.0094 Score=68.61 Aligned_cols=158 Identities=15% Similarity=0.177 Sum_probs=98.6
Q ss_pred cccccCCCeEEEecCCHHHHHHHHhc---C-CCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcc
Q 000775 184 LNLSGFGGLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 259 (1291)
Q Consensus 184 ~~~~~~~~~~~~~P~sl~eal~ll~~---~-~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA 259 (1291)
+.+ +....-|+.|+|.+|+.++++- + -...+++|||.+.+. . ......+|++++... .+...+..+++||
T Consensus 7 ~~i-gg~a~~~v~p~s~edl~~~l~~a~~~~~p~~vlGgGSNll~~--d-~~~~gvvi~l~~~~~--~~~~~~~~v~v~a 80 (284)
T TIGR00179 7 YKI-GGNARHIVCPESIEQLVNVLDNAKEEDQPLLILGEGSNLLIL--D-DGRGGVIINLGKGID--IEDDEGEYVHVGG 80 (284)
T ss_pred eec-CceeeEEEEeCCHHHHHHHHHHHHHcCCCEEEEecceEEEEc--c-CCcCeEEEECCCCce--EEEecCCEEEEEc
Confidence 444 4445679999999999987752 2 247899999999852 1 222357899876422 2223356899999
Q ss_pred cCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCC-CC-hHHHHHhcCCEEEEEeCCC
Q 000775 260 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPI-SD-LNPLWMASGAKFHIVDCKG 337 (1291)
Q Consensus 260 ~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~-sD-~~p~Llal~A~v~l~s~~g 337 (1291)
++++.+|.+.+.+. .+. . +..++..+ |||||++++-.-. +- +.=. .+ .|++...+|
T Consensus 81 G~~~~~l~~~~~~~--Gl~--------G----lE~l~giP----GtvGGai~mNAGayG~~i~d~--l~--~v~vv~~~G 138 (284)
T TIGR00179 81 GENWHKLVKYALKN--GLS--------G----LEFLAGIP----GTVGGAVIMNAGAYGVEISEV--LV--YATILLATG 138 (284)
T ss_pred CCcHHHHHHHHHHC--CCc--------c----cccCCCCC----chHHHHHHHhcccchhehhhe--EE--EEEEEeCCC
Confidence 99999999875321 211 0 11122222 5899999754322 11 1101 12 344456677
Q ss_pred cEEEEEhHhHhccCccccCCCce--EEEEEEecC
Q 000775 338 NIRTTMAEEFFLGYRKVDLTSGE--ILLSIFLPW 369 (1291)
Q Consensus 338 ~~R~vpl~dF~~g~~~t~L~~~E--ii~~I~iP~ 369 (1291)
..++++-+|.--+||.+.++.+. ++++..+..
T Consensus 139 ~~~~~~~~~~~f~YR~S~f~~~~~~iil~a~~~l 172 (284)
T TIGR00179 139 KTEWLTNEQLGFGYRTSIFQHKYVGLVLKAEFQL 172 (284)
T ss_pred CEEEEEHHHccccCCccccCCCCcEEEEEEEEEe
Confidence 57889999988899988887643 666655543
No 37
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.63 E-value=0.0083 Score=69.62 Aligned_cols=160 Identities=21% Similarity=0.307 Sum_probs=103.4
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhc---CC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEc
Q 000775 183 PLNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 258 (1291)
Q Consensus 183 ~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IG 258 (1291)
++.+ +.....++.|+|.+|+.++++. +. ...++.|||.+.+. .. .....+||+++ .|+.|+.+++.+++|
T Consensus 24 t~~i-gg~a~~vv~P~s~edv~~~v~~a~~~~~p~~v~GgGsnll~~--d~-g~~gvvI~l~~--~l~~i~~~~~~v~v~ 97 (298)
T PRK13905 24 SFRV-GGPADYLVEPADIEDLQEFLKLLKENNIPVTVLGNGSNLLVR--DG-GIRGVVIRLGK--GLNEIEVEGNRITAG 97 (298)
T ss_pred eeec-CceEeEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCceEEec--CC-CcceEEEEecC--CcceEEecCCEEEEE
Confidence 3445 4435567999999999887752 22 47889999998641 11 12368899873 467777778899999
Q ss_pred ccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccc-cCCCC-ChHHHHHhcCCEEEEEeCC
Q 000775 259 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASPIS-DLNPLWMASGAKFHIVDCK 336 (1291)
Q Consensus 259 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~-asp~s-D~~p~Llal~A~v~l~s~~ 336 (1291)
|++++.+|.+.+.+. .+. . +...++. -+||||.+++ +.-.+ ++.=.+ -.|++...+
T Consensus 98 aG~~~~~L~~~l~~~--Gl~--------g----le~~~gi----pGTVGGai~~NaG~~G~~~~d~v----~~v~vv~~~ 155 (298)
T PRK13905 98 AGAPLIKLARFAAEA--GLS--------G----LEFAAGI----PGTVGGAVFMNAGAYGGETADVL----ESVEVLDRD 155 (298)
T ss_pred CCCcHHHHHHHHHHc--CCC--------c----chhccCC----CcchhHHHHHcCCcCceEhheeE----EEEEEEeCC
Confidence 999999999875432 110 0 1112332 2689998863 32222 111111 124555567
Q ss_pred CcEEEEEhHhHhccCccccCCC-ceEEEEEEecCC
Q 000775 337 GNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPWT 370 (1291)
Q Consensus 337 g~~R~vpl~dF~~g~~~t~L~~-~Eii~~I~iP~~ 370 (1291)
|..++++-+|.+-+|+...+.. ..||+++.+-..
T Consensus 156 G~~~~~~~~e~~~~yR~s~~~~~~gII~~~~l~l~ 190 (298)
T PRK13905 156 GEIKTLSNEELGFGYRHSALQEEGLIVLSATFQLE 190 (298)
T ss_pred CCEEEEEHHHcCCcCccccCCCCCEEEEEEEEEEc
Confidence 7678888888888898877763 458888877654
No 38
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.45 E-value=0.018 Score=66.94 Aligned_cols=155 Identities=16% Similarity=0.234 Sum_probs=100.9
Q ss_pred cCCCeEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcH
Q 000775 188 GFGGLKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRL 263 (1291)
Q Consensus 188 ~~~~~~~~~P~sl~eal~ll~---~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl 263 (1291)
|....-++.|.|.+|+.++++ ++. ...++.|||.+.+. .+. ....+|++++ |+.|+.+++.+++||++++
T Consensus 34 GG~A~~~v~p~~~edv~~~v~~a~~~~ip~~vlGgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~ 107 (307)
T PRK13906 34 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIR--EGG-IRGIVISLLS---LDHIEVSDDAIIAGSGAAI 107 (307)
T ss_pred CceeEEEEEcCCHHHHHHHHHHHHHcCCCEEEEcCceeEeec--CCC-cceEEEEecC---ccceEEeCCEEEEECCCcH
Confidence 333456899999999988775 222 37889999999752 221 2368899865 6677777889999999999
Q ss_pred HHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccccc-CCCC-ChHHHHHhcCCEEEEEeCCCcEEE
Q 000775 264 TELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA-SPIS-DLNPLWMASGAKFHIVDCKGNIRT 341 (1291)
Q Consensus 264 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~a-sp~s-D~~p~Llal~A~v~l~s~~g~~R~ 341 (1291)
.+|.+.+.+. .+. .+ + ..++. -|||||++.+- .-.+ ++.=.|+ .|++...+|..++
T Consensus 108 ~~l~~~~~~~--Gl~--------Gl-E---~~~gI----PGtVGGav~mNaGayGg~i~D~l~----~v~vv~~~G~~~~ 165 (307)
T PRK13906 108 IDVSRVARDY--ALT--------GL-E---FACGI----PGSIGGAVYMNAGAYGGEVKDCID----YALCVNEQGSLIK 165 (307)
T ss_pred HHHHHHHHHc--CCc--------cc-h---hhcCC----CccHhHHHHhhCCcchhhhhhhee----EEEEEeCCCCEEE
Confidence 9999874321 111 11 1 11221 36899998643 3221 2222222 3444556676888
Q ss_pred EEhHhHhccCccccCCCc-eEEEEEEecCC
Q 000775 342 TMAEEFFLGYRKVDLTSG-EILLSIFLPWT 370 (1291)
Q Consensus 342 vpl~dF~~g~~~t~L~~~-Eii~~I~iP~~ 370 (1291)
++-+|..-+||.+.++.+ .+|+++.+-..
T Consensus 166 ~~~~e~~f~YR~S~~~~~~~ii~~~~~~l~ 195 (307)
T PRK13906 166 LTTKELELDYRNSIIQKEHLVVLEAAFTLA 195 (307)
T ss_pred EEHHHccCcCCcccCCCCCEEEEEEEEEEC
Confidence 999998889999888764 47777666543
No 39
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.42 E-value=0.023 Score=65.44 Aligned_cols=158 Identities=17% Similarity=0.230 Sum_probs=103.4
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhcC----CCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEE
Q 000775 182 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEI 257 (1291)
Q Consensus 182 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~I 257 (1291)
.++.+ |..-..|+.|.|.+|+.++++.. -...++.||+-+++. .+......+|.+.+ ++.|+..++.|++
T Consensus 25 tt~~i-GG~A~~~~~p~~~~eL~~~l~~~~~~~~p~~vlG~GSNlLv~--D~g~~~g~vi~~~~---~~~i~~~~~~v~a 98 (302)
T PRK14650 25 TTYKI-GGISKLFLTPKTIKDAEHIFKAAIEEKIKIFILGGGSNILIN--DEEEIDFPIIYTGH---LNKIEIHDNQIVA 98 (302)
T ss_pred ceeee-CcEEEEEEecCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEE--CCCccceEEEEECC---cCcEEEeCCEEEE
Confidence 45666 55456788999999998887532 247889999999872 22102245666543 6777777789999
Q ss_pred cccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccc-cC----CCCChHHHHHhcCCEEEE
Q 000775 258 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-AS----PISDLNPLWMASGAKFHI 332 (1291)
Q Consensus 258 GA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~-as----p~sD~~p~Llal~A~v~l 332 (1291)
||++.+.++.....+ ..+ .. +..++..+ ||+||-+++ +. -++|.+ -+|++
T Consensus 99 ~AG~~~~~l~~~~~~--~gl--------~G----lE~l~gIP----GTVGGAv~mNAGayG~ei~d~l-------~sV~~ 153 (302)
T PRK14650 99 ECGTNFEDLCKFALQ--NEL--------SG----LEFIYGLP----GTLGGAIWMNARCFGNEISEIL-------DKITF 153 (302)
T ss_pred EeCCcHHHHHHHHHH--cCC--------ch----hhhhcCCC----cchhHHHHhhCCccccchheeE-------EEEEE
Confidence 999999999986322 121 11 12233333 677776643 22 123432 23555
Q ss_pred EeCCCcEEEEEhHhHhccCccccCCC-ceEEEEEEecCC
Q 000775 333 VDCKGNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPWT 370 (1291)
Q Consensus 333 ~s~~g~~R~vpl~dF~~g~~~t~L~~-~Eii~~I~iP~~ 370 (1291)
...+|+.++++-+|.--+||...++. +.+|+++.+...
T Consensus 154 ~d~~g~~~~~~~~e~~f~YR~S~f~~~~~iIl~a~f~L~ 192 (302)
T PRK14650 154 IDEKGKTICKKFKKEEFKYKISPFQNKNTFILKATLNLK 192 (302)
T ss_pred EECCCCEEEEEHHHcCcccccccCCCCCEEEEEEEEEEc
Confidence 66666678899999888999988876 457788777554
No 40
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=96.37 E-value=0.0085 Score=61.19 Aligned_cols=102 Identities=12% Similarity=0.135 Sum_probs=70.0
Q ss_pred EEEecCCHHHHHHHHhc---C-CCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHH
Q 000775 193 KWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 268 (1291)
Q Consensus 193 ~~~~P~sl~eal~ll~~---~-~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~ 268 (1291)
-+++|+|.+|+.++++. + -..++.+||+...- ........+||++++...-.+..++..++++|++++.||.+
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~~~~~v~~~g~G~~~~~---~~~~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~ 79 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANENGVPVRVRGGGHSWTG---QSSDEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYE 79 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTSEEEEESSSTTSSS---TTSSTTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCccc---ccccCCcEEEeeccccccccccccceeEEEeccccchhccc
Confidence 47899999999988753 2 24677888888863 12234578999998655434444578999999999999999
Q ss_pred HhhhhhhcCCccchhHHHHHHHHHHhhc-CcceecceeecccccccCC
Q 000775 269 MFRKVVTERPAHETSSCKAFIEQIKWFA-GTQIKNVASVGGNICTASP 315 (1291)
Q Consensus 269 ~l~~~~~~~~~~~~~~~~~L~~~~~~ia-s~qIRN~aTiGGNI~~asp 315 (1291)
.|.+.-.. +. .+.--.-+|+||.|++...
T Consensus 80 ~l~~~g~~------------------~~~~~~~~~~~tvGG~i~~~~~ 109 (139)
T PF01565_consen 80 ALAPRGLM------------------LPVEPGSGIPGTVGGAIAGNGH 109 (139)
T ss_dssp HHHHHTEE------------------ESSGGGSTTTSBHHHHHHTT-E
T ss_pred cccccccc------------------ccccccccccceEchhhcCCCc
Confidence 86432111 12 1333456799999987643
No 41
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=95.98 E-value=0.011 Score=72.81 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=76.3
Q ss_pred eEEEecCCHHHHHHHHhcC--CC--cEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHH
Q 000775 192 LKWYRPLKLQHLLELKSKY--PD--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 267 (1291)
Q Consensus 192 ~~~~~P~sl~eal~ll~~~--~~--a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 267 (1291)
..+..|+|.+|+.++++.- .+ ..+.+|||++.-...-. ..++||++++..+..|..++..+++.+++++.+|.
T Consensus 33 ~~v~~p~s~~eV~~iv~~a~~~~~~v~prG~gts~~g~~~~~---~gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~ 109 (459)
T COG0277 33 LAVVFPKSEEEVAAILRLANENGIPVVPRGGGTSLSGGAVPD---GGVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLE 109 (459)
T ss_pred CEEEccCCHHHHHHHHHHHHHcCCeEEEECCCCCccccccCC---CcEEEEchhhcchhccCcCCCEEEEcCCccHHHHH
Confidence 3689999999999887643 12 66789999985422111 16899999966665566678999999999999999
Q ss_pred HHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccC
Q 000775 268 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 314 (1291)
Q Consensus 268 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~as 314 (1291)
+.+++.-..++ ..|+.++.+||||||++.+
T Consensus 110 ~~l~~~G~~~p-----------------~~p~s~~~~tIGG~ia~~~ 139 (459)
T COG0277 110 KALAPHGLFLP-----------------VDPSSSGTATIGGNIATNA 139 (459)
T ss_pred HHHHHcCCccC-----------------CCccccccceEccchhcCC
Confidence 98764422211 4677779999999999864
No 42
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.95 E-value=0.044 Score=63.72 Aligned_cols=152 Identities=17% Similarity=0.256 Sum_probs=98.5
Q ss_pred CeEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHH
Q 000775 191 GLKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 266 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~---~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 266 (1291)
..-++.|.|.+|+.++++ ++. ...++.|||.+.+. .+. ....+|++++ |+.|+.+++.+++||++++.+|
T Consensus 37 a~~vv~p~~~edv~~~l~~a~~~~ip~~v~GgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L 110 (305)
T PRK12436 37 ADVFVAPTNYDEIQEVIKYANKYNIPVTFLGNGSNVIIK--DGG-IRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDV 110 (305)
T ss_pred EEEEEecCCHHHHHHHHHHHHHcCCCEEEEcCCeEEEEe--CCC-eeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHH
Confidence 456889999999988874 221 37889999999742 221 2367899875 5567777889999999999999
Q ss_pred HHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccc-cCCCC-ChHHHHHhcCCEEEEEeCCCcEEEEEh
Q 000775 267 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASPIS-DLNPLWMASGAKFHIVDCKGNIRTTMA 344 (1291)
Q Consensus 267 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~-asp~s-D~~p~Llal~A~v~l~s~~g~~R~vpl 344 (1291)
.+.+.+. .+. .| ...+ ---|||||++.+ +.-.+ ++.=. + ..+++...+|+.++++-
T Consensus 111 ~~~~~~~--gl~--------Gl----e~~~----giPGtVGGav~~NAGayG~~~~dv---l-~~v~vv~~~G~v~~~~~ 168 (305)
T PRK12436 111 SRIALDH--NLT--------GL----EFAC----GIPGSVGGALYMNAGAYGGEISFV---L-TEAVVMTGDGELRTLTK 168 (305)
T ss_pred HHHHHHc--CCc--------cc----hhhc----CCccchhHHHHhcCccchhehhee---e-eEEEEEeCCCCEEEEEH
Confidence 8875322 110 00 1111 124789999974 33222 11000 1 12344456676888999
Q ss_pred HhHhccCccccCCCc-eEEEEEEecCC
Q 000775 345 EEFFLGYRKVDLTSG-EILLSIFLPWT 370 (1291)
Q Consensus 345 ~dF~~g~~~t~L~~~-Eii~~I~iP~~ 370 (1291)
+|..-+||.+.++.+ .||+++.+-..
T Consensus 169 ~e~~f~YR~s~~~~~~~iil~a~~~l~ 195 (305)
T PRK12436 169 EAFEFGYRKSVFANNHYIILEARFELE 195 (305)
T ss_pred HHhcCcCCCCcCCCCCEEEEEEEEEEc
Confidence 998889998888653 36777666554
No 43
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=95.83 E-value=0.021 Score=69.88 Aligned_cols=106 Identities=21% Similarity=0.150 Sum_probs=69.6
Q ss_pred CeEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhH-HHHhc--CCCccEEEeCCCCCCCccEEEcCCeEEEcccCcH
Q 000775 191 GLKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGI-EMRLK--RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRL 263 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~---~~~-~a~lvAGgTdl~~-~~~~~--~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl 263 (1291)
..-.++|.|.+|..++++ ++. -...-+|||+|.= ..-.+ ..+..++||+.++..+..|. ++..+.+.+++|+
T Consensus 39 P~AVV~P~SteEVa~IVklC~e~~vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVtl 117 (564)
T PRK11183 39 ALAVVFPGTLLELWRVLQACVAADKIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTTL 117 (564)
T ss_pred CCEEEecCCHHHHHHHHHHHHHcCCeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCcH
Confidence 346899999999998876 332 2455689998831 11110 11235899999877666665 4568999999999
Q ss_pred HHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccccc
Q 000775 264 TELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 313 (1291)
Q Consensus 264 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~a 313 (1291)
.+|.+.+++.-...+ ..++|.+|- +||||||++.
T Consensus 118 ~~LeeaLk~~Gl~p~--------------sd~GSS~IG--asIGGnIAtN 151 (564)
T PRK11183 118 YQLEKALKPLGREPH--------------SVIGSSCIG--ASVIGGICNN 151 (564)
T ss_pred HHHHHHHHHhCCCCC--------------CcccccccC--CCCccceEEC
Confidence 999998765422111 013454443 3999999976
No 44
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.25 E-value=0.11 Score=60.92 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=96.4
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhcC----CCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEE---cCC--
Q 000775 183 PLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV---KDD-- 253 (1291)
Q Consensus 183 ~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~---~~~-- 253 (1291)
++.+ |..-..|+.|.|.+|+.++++.. -...+|.||+-+++. .+ .+..+|.+ + ++.++. +++
T Consensus 14 t~ri-GG~A~~~~~p~~~~el~~~~~~~~~~~~p~~vlG~GSNlLv~--D~--~~g~vI~~-~---~~~~~~~~~~~~~~ 84 (334)
T PRK00046 14 TFGI-DARARHLVEAESEEQLLEALADARAAGLPVLVLGGGSNVLFT--ED--FDGTVLLN-R---IKGIEVLSEDDDAW 84 (334)
T ss_pred eecc-CcEEeEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceEEEEEC--CC--CCEEEEEe-c---CCceEEEecCCCeE
Confidence 4556 55456788999999999988632 137899999999883 22 34566765 3 444544 333
Q ss_pred eEEEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccc-cCC----CCChHHHHHhcCC
Q 000775 254 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASP----ISDLNPLWMASGA 328 (1291)
Q Consensus 254 ~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~-asp----~sD~~p~Llal~A 328 (1291)
.+++||++.+.+|.....+ ..+ .. +..+++.+ |||||-+.+ +.- ++|.+ -
T Consensus 85 ~v~a~AG~~~~~l~~~~~~--~gl--------~G----lE~l~gIP----GTVGGAv~mNaGayG~ei~d~l-------~ 139 (334)
T PRK00046 85 YLHVGAGENWHDLVLWTLQ--QGM--------PG----LENLALIP----GTVGAAPIQNIGAYGVELKDVC-------D 139 (334)
T ss_pred EEEEEcCCcHHHHHHHHHH--cCc--------hh----hHHhcCCC----cchhHHHHhcCCcCcccHheeE-------E
Confidence 6999999999999987432 121 12 22334333 677776642 221 23322 2
Q ss_pred EEEEEeCC-CcEEEEEhHhHhccCccccCCCc----eEEEEEEecC
Q 000775 329 KFHIVDCK-GNIRTTMAEEFFLGYRKVDLTSG----EILLSIFLPW 369 (1291)
Q Consensus 329 ~v~l~s~~-g~~R~vpl~dF~~g~~~t~L~~~----Eii~~I~iP~ 369 (1291)
+|++...+ |..+++.-+|..-+||.+.++.+ .+|+++.+-.
T Consensus 140 ~V~v~d~~~g~~~~~~~~e~~f~YR~S~f~~~~~~~~iVl~a~f~L 185 (334)
T PRK00046 140 YVEALDLATGEFVRLSAAECRFGYRDSIFKHEYPDRYAITAVGFRL 185 (334)
T ss_pred EEEEEECCCCcEEEEEHHHcCcccccccCCCCCcCCEEEEEEEEEe
Confidence 45666654 65788999998888988877642 3555555443
No 45
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=95.21 E-value=0.055 Score=67.05 Aligned_cols=102 Identities=8% Similarity=0.111 Sum_probs=71.2
Q ss_pred CeEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHH
Q 000775 191 GLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 266 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 266 (1291)
...+++|+|.+|+.++++.. . ..+.++||++..-. ......+||++++..+-.|..+...++++|++++.+|
T Consensus 62 p~~~~~P~s~eEV~~iV~~A~~~g~~Vr~~GsGhS~sg~----a~t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L 137 (541)
T TIGR01676 62 TRTFHQPEAIEELEGIVKQANEKKARIRPVGSGLSPNGI----GLSRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQL 137 (541)
T ss_pred cceEECCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCc----ccCCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHH
Confidence 35689999999999988643 2 47888888876321 1122468999987766666666789999999999999
Q ss_pred HHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccC
Q 000775 267 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 314 (1291)
Q Consensus 267 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~as 314 (1291)
.+.|.+.- + .+.+..--+..||||+|+++.
T Consensus 138 ~~~L~~~G--l----------------al~n~gsi~~~TIGGaiatgt 167 (541)
T TIGR01676 138 VDAIKEYG--I----------------TLQNFASIREQQIGGIIQVGA 167 (541)
T ss_pred HHHHHHcC--C----------------EeccCCCCCCceEccccccCC
Confidence 98764321 0 012222235689999999863
No 46
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=95.11 E-value=0.07 Score=65.24 Aligned_cols=156 Identities=15% Similarity=0.214 Sum_probs=88.0
Q ss_pred eEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHH
Q 000775 192 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 267 (1291)
Q Consensus 192 ~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 267 (1291)
..+++|+|.+|+.++++.- . ..++++||++..-. ......+||++++..+-.|..+.+.++++|++++.+|.
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~~~~~v~v~G~GhS~s~~----~~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~ 91 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALAREQKKKVKVVGGGHSPSDI----ACTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLH 91 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEECCCCCCCCC----ccCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHH
Confidence 3689999999999887632 2 46788888553210 11235899998866554444445689999999999999
Q ss_pred HHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChH-HHHHhcCCEEEEEeCCCcEEEEEh--
Q 000775 268 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLN-PLWMASGAKFHIVDCKGNIRTTMA-- 344 (1291)
Q Consensus 268 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~-p~Llal~A~v~l~s~~g~~R~vpl-- 344 (1291)
+.|.+.--. +...++. +..||||.|+++..-+..- ..+...=-.+++...+|...+++-
T Consensus 92 ~~L~~~Gl~---------------l~~~g~~---~~~TvGG~iatg~hG~~~~~G~~~d~V~~l~vV~~~G~i~~~s~~~ 153 (438)
T TIGR01678 92 EQLDEHGYS---------------MSNLGSI---SEVSVAGIISTGTHGSSIKHGILATQVVALTIMTADGEVLECSEER 153 (438)
T ss_pred HHHHHcCCE---------------ecCCCCC---CCceeeehhcCCCCCCccccCcHHhhEEEEEEEcCCCcEEEeCCCC
Confidence 876432100 1112222 4589999887764332111 111111122455556664444432
Q ss_pred -HhHhccCccccCCCceEEEEEEecCC
Q 000775 345 -EEFFLGYRKVDLTSGEILLSIFLPWT 370 (1291)
Q Consensus 345 -~dF~~g~~~t~L~~~Eii~~I~iP~~ 370 (1291)
.|.|..- ...+..--||+++.|-..
T Consensus 154 ~~dlf~a~-~~~~G~lGIIt~vtl~l~ 179 (438)
T TIGR01678 154 NADVFQAA-RVSLGCLGIIVTVTIQVV 179 (438)
T ss_pred ChhHHHHH-hcCCCceEeeEEEEEEEE
Confidence 2333211 112222357888877654
No 47
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.96 E-value=0.23 Score=56.75 Aligned_cols=165 Identities=19% Similarity=0.211 Sum_probs=105.9
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhcCC----CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEc
Q 000775 183 PLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 258 (1291)
Q Consensus 183 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~----~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IG 258 (1291)
++.+ |..-..|+.|.+.+|+.++++..+ ...++.||+.+++. .+. ...++|.+.... ...++.+++.|++|
T Consensus 14 tfri-Gg~A~~~~~~~~~e~l~~~~~~~~~~~~p~~ilG~GSNlLv~--d~g-~~gvvi~~~~~~-~~~~~~~~~~i~a~ 88 (291)
T COG0812 14 TFRI-GGPAEVLVEPRDIEELKAALKYAKAEDLPVLILGGGSNLLVR--DGG-IGGVVIKLGKLN-FIEIEGDDGLIEAG 88 (291)
T ss_pred eEec-CcceeEEEecCCHHHHHHHHHhhhhcCCCEEEEecCceEEEe--cCC-CceEEEEccccc-ceeeeccCCeEEEc
Confidence 3445 555668999999999988875432 47899999998772 222 234555555432 12233344499999
Q ss_pred ccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCChHHHHHhcCCEEEEEeCCCc
Q 000775 259 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGN 338 (1291)
Q Consensus 259 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~~p~Llal~A~v~l~s~~g~ 338 (1291)
|+..+.+|.....+ ..+. -+.-++--=..+|+-.+-|.|+-|+. ++|.+. +|++...+|+
T Consensus 89 aG~~~~~l~~~~~~--~gl~-----GlE~l~gIPGsvGgav~mNaGAyG~E------i~d~~~-------~v~~ld~~G~ 148 (291)
T COG0812 89 AGAPWHDLVRFALE--NGLS-----GLEFLAGIPGSVGGAVIMNAGAYGVE------ISDVLV-------SVEVLDRDGE 148 (291)
T ss_pred cCCcHHHHHHHHHH--cCCc-----chhhhcCCCcccchhhhccCcccccc------hheeEE-------EEEEEcCCCC
Confidence 99999999886322 1211 11111111123455555555555554 344332 4666677887
Q ss_pred EEEEEhHhHhccCccccCCCc-eEEEEEEecCCCC
Q 000775 339 IRTTMAEEFFLGYRKVDLTSG-EILLSIFLPWTRP 372 (1291)
Q Consensus 339 ~R~vpl~dF~~g~~~t~L~~~-Eii~~I~iP~~~~ 372 (1291)
.++++-+|.--|||...++.. -+|+++.+-..+.
T Consensus 149 ~~~l~~~el~f~YR~S~f~~~~~vvl~v~f~L~~~ 183 (291)
T COG0812 149 VRWLSAEELGFGYRTSPFKKEYLVVLSVEFKLTKG 183 (291)
T ss_pred EEEEEHHHhCcccccCcCCCCCEEEEEEEEEeCCC
Confidence 899999998889999999877 7888888877643
No 48
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.91 E-value=0.11 Score=61.53 Aligned_cols=143 Identities=15% Similarity=0.184 Sum_probs=87.8
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhc---C-CCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEc--CCeE
Q 000775 182 NPLNLSGFGGLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK--DDGL 255 (1291)
Q Consensus 182 ~~~~~~~~~~~~~~~P~sl~eal~ll~~---~-~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~--~~~l 255 (1291)
.++.+ +.....|+.|.|.+|+.++++. + -...++.||+.+++ .....+..+|+++. +.|+.+ ++.+
T Consensus 25 tt~~i-Gg~A~~~~~p~s~edl~~~l~~a~~~~~p~~vlGgGSNlLv---~D~g~~GvVI~l~~----~~i~i~~~~~~v 96 (363)
T PRK13903 25 TTLRV-GGPARRLVTCTSTEELVAAVRELDAAGEPLLVLGGGSNLVI---ADDGFDGTVVRVAT----RGVTVDCGGGLV 96 (363)
T ss_pred cEeec-CccceEEEEeCCHHHHHHHHHHHHHCCCCEEEEeCCeeEeE---CCCCccEEEEEeCC----CcEEEeCCCCEE
Confidence 34566 5545678899999999988752 2 24789999999975 12213467888863 556555 6789
Q ss_pred EEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccccc-CC----CCChHHHHHhcCCEE
Q 000775 256 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA-SP----ISDLNPLWMASGAKF 330 (1291)
Q Consensus 256 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~a-sp----~sD~~p~Llal~A~v 330 (1291)
++||++++.++...+.+. .+. . +...+.. -||+||-+.+- .- ++|.+ -.|
T Consensus 97 ~vgAG~~~~~l~~~a~~~--GL~--------G----lE~laGI----PGTVGGAv~mNaGayG~ei~D~l-------~sV 151 (363)
T PRK13903 97 RAEAGAVWDDVVARTVEA--GLG--------G----LECLSGI----PGSAGATPVQNVGAYGQEVSDTI-------TRV 151 (363)
T ss_pred EEEcCCCHHHHHHHHHHc--CCc--------c----ccccCCC----CcchhhHhhcCCChhHHHHhhhE-------eEE
Confidence 999999999999874321 111 0 1112222 26667665432 11 23322 124
Q ss_pred EEEeCC-CcEEEEEhHhHhccCccccCC
Q 000775 331 HIVDCK-GNIRTTMAEEFFLGYRKVDLT 357 (1291)
Q Consensus 331 ~l~s~~-g~~R~vpl~dF~~g~~~t~L~ 357 (1291)
++...+ |+.++++-+|.+-+||...++
T Consensus 152 ~vvd~~~G~~~~~~~~el~f~YR~S~f~ 179 (363)
T PRK13903 152 RLLDRRTGEVRWVPAADLGFGYRTSVLK 179 (363)
T ss_pred EEEECCCCEEEEEEHHHcceeccccccC
Confidence 445533 546778888877778776654
No 49
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.82 E-value=0.15 Score=59.16 Aligned_cols=161 Identities=12% Similarity=0.146 Sum_probs=100.2
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhc---CC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCC--eE
Q 000775 182 NPLNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD--GL 255 (1291)
Q Consensus 182 ~~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~--~l 255 (1291)
.++.+ |.....|+.|+|.+|+.++++. +. ...++.||+.+++. .......+|+++.- .+ .+..+++ .+
T Consensus 13 tt~~i-Gg~a~~~v~p~~~~dl~~~l~~~~~~~ip~~vlG~GSNlL~~---d~g~~GvVI~l~~~-~~-~i~~~~~~~~v 86 (295)
T PRK14649 13 TSWRI-GGPARYFVEPTTPDEAIAAAAWAEQRQLPLFWLGGGSNLLVR---DEGFDGLVARYRGQ-RW-ELHEHGDTAEV 86 (295)
T ss_pred cEeee-CceeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEecceeEEEe---CCCcCeEEEEecCC-Cc-EEEEeCCcEEE
Confidence 34556 5545678889999999988752 22 47889999999762 22234578888642 24 4555545 79
Q ss_pred EEcccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccc-ccccCCC-CChHHHHHhcCCEEEEE
Q 000775 256 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGN-ICTASPI-SDLNPLWMASGAKFHIV 333 (1291)
Q Consensus 256 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGN-I~~asp~-sD~~p~Llal~A~v~l~ 333 (1291)
++||++++.++...+.+ ..+. .| + ..+.. =||+||- ++|+.-. .++.=.|. .|++.
T Consensus 87 ~v~AG~~~~~l~~~~~~--~GL~--------Gl-E---~l~GI----PGTvGGa~~mNaGayg~ei~d~l~----~V~~~ 144 (295)
T PRK14649 87 WVEAGAPMAGTARRLAA--QGWA--------GL-E---WAEGL----PGTIGGAIYGNAGCYGGDTATVLI----RAWLL 144 (295)
T ss_pred EEEcCCcHHHHHHHHHH--cCCc--------cc-c---ccCCC----CcchhHHHHhhccccceEhheeEE----EEEEE
Confidence 99999999999987432 1211 11 1 12222 2688883 3454432 12222222 24555
Q ss_pred eCCCcEEEEEhHhHhccCccccCCC---------ceEEEEEEecCC
Q 000775 334 DCKGNIRTTMAEEFFLGYRKVDLTS---------GEILLSIFLPWT 370 (1291)
Q Consensus 334 s~~g~~R~vpl~dF~~g~~~t~L~~---------~Eii~~I~iP~~ 370 (1291)
..+|+.++++-+|..-|||...++. +.+|+++.+-..
T Consensus 145 ~~~g~~~~~~~~el~f~YR~S~~~~~~~~~~~~~~~ii~~~~~~l~ 190 (295)
T PRK14649 145 LNGSECVEWSVHDFAYGYRTSVLKQLRADGITWRPPLVLAARFRLH 190 (295)
T ss_pred eCCCCEEEEeHHHcCcccceeecccccccccccCCeEEEEEEEEEC
Confidence 6666588899999888999887765 347787765443
No 50
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=94.77 E-value=0.14 Score=64.09 Aligned_cols=103 Identities=10% Similarity=0.179 Sum_probs=66.6
Q ss_pred CeEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHH
Q 000775 191 GLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 266 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 266 (1291)
...+++|+|.+|+.++++.. . ..+++++|.+..-. ......+||++++..+-.|..+...++++|++++.+|
T Consensus 97 p~~vv~P~S~eEV~~iV~~A~~~g~~VrvvGsGhS~~~l----~~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L 172 (573)
T PLN02465 97 TRRYHQPESLEELEDIVKEAHEKGRRIRPVGSGLSPNGL----AFSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQV 172 (573)
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCe----eeCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHH
Confidence 34689999999999988642 2 47788888743211 0123458999875544344444568999999999999
Q ss_pred HHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCC
Q 000775 267 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP 315 (1291)
Q Consensus 267 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp 315 (1291)
.+.|.+.- |. +...++. +.+||||.|.++..
T Consensus 173 ~~~L~~~G-------------La--l~n~g~I---~~~TIGGaIstGtH 203 (573)
T PLN02465 173 VEALRPHG-------------LT--LQNYASI---REQQIGGFIQVGAH 203 (573)
T ss_pred HHHHHHcC-------------CE--eccCCCC---CCeeecchhhCCCC
Confidence 98764321 00 1112322 46799999976643
No 51
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=94.45 E-value=0.089 Score=65.50 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=70.4
Q ss_pred eEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHH
Q 000775 192 LKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 267 (1291)
Q Consensus 192 ~~~~~P~sl~eal~ll~---~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 267 (1291)
.-.++|.|.+|+.++++ ++. ...+.+|||++.-. .-......+||++++..+..|..++..++++|++|+.+|.
T Consensus 57 ~~Vv~P~s~eeV~~iv~~a~~~~ipv~~rG~Gt~~~gg--~~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~ 134 (499)
T PRK11230 57 LLVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLSGG--ALPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAIS 134 (499)
T ss_pred CEEEeeCCHHHHHHHHHHHHHcCCeEEEECCCcCcCCC--cccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHH
Confidence 35789999999988776 222 24567888887221 0011235899999866555556667889999999999999
Q ss_pred HHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccccc
Q 000775 268 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 313 (1291)
Q Consensus 268 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~a 313 (1291)
+.+.+.-..+ -..+.-...+||||||++.
T Consensus 135 ~~l~~~Gl~~-----------------~~~p~s~~~~tvGG~ia~n 163 (499)
T PRK11230 135 QAAAPHGLYY-----------------APDPSSQIACSIGGNVAEN 163 (499)
T ss_pred HHHHHcCCee-----------------CCCCCccccceEcceeccC
Confidence 9865432111 1234445679999999864
No 52
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=94.45 E-value=0.06 Score=65.56 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=66.5
Q ss_pred EecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHh
Q 000775 195 YRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 270 (1291)
Q Consensus 195 ~~P~sl~eal~ll~---~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 270 (1291)
++|.|.+|+.++++ ++. ...+.+|||.+.-.. . ......+||++++...-.|..++..++++|++++.+|.+.+
T Consensus 2 v~P~s~eev~~iv~~a~~~~i~v~~~G~Gt~~~g~~-~-~~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~l 79 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHEHRIPIVPRGAGTGLSGGA-L-PEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQAV 79 (413)
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCc-c-CCCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHHH
Confidence 57999999988775 332 477889999874110 0 01235788987755443444446889999999999999986
Q ss_pred hhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccccc
Q 000775 271 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 313 (1291)
Q Consensus 271 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~a 313 (1291)
.+.--.++ -.++-...+||||+|++.
T Consensus 80 ~~~gl~~~-----------------~~p~s~~~~tiGG~ia~n 105 (413)
T TIGR00387 80 EEHNLFYP-----------------PDPSSQISSTIGGNIAEN 105 (413)
T ss_pred HHcCCeeC-----------------CCCcccccceehhhhhcC
Confidence 54311110 134445579999999864
No 53
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=94.13 E-value=0.35 Score=60.77 Aligned_cols=161 Identities=14% Similarity=0.094 Sum_probs=85.8
Q ss_pred eEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhcCCCc-cEEEeCCCCCCCccEEEcCCeEEEcccCcHHHH
Q 000775 192 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQY-QVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 266 (1291)
Q Consensus 192 ~~~~~P~sl~eal~ll~~~---~-~a~lvAGgTdl~~~~~~~~~~~-~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 266 (1291)
..+++|+|.+|+.++++.- . ..++++|++.....+-...... ..+||++++..+-.|..+...++++|++++.+|
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~L 112 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATAAGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLREL 112 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHHH
Confidence 4689999999999988633 2 2455554332211100000011 389999986655455555578999999999999
Q ss_pred HHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCCh-----HHHHHhcCCEEEEEeC--CC--
Q 000775 267 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDL-----NPLWMASGAKFHIVDC--KG-- 337 (1291)
Q Consensus 267 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD~-----~p~Llal~A~v~l~s~--~g-- 337 (1291)
.+.|.+.--. ++. .+ .+- ..||||.|.++..-+.+ ...=..++.+|++.+. +|
T Consensus 113 ~~~L~~~Gla--------l~~-------~~--~~~-~~TVGGaiatGthGs~~~~~~G~l~d~V~~l~vV~a~G~a~G~~ 174 (557)
T TIGR01677 113 IVEAEKAGLA--------LPY-------AP--YWW-GLTVGGMMGTGAHGSSLWGKGSAVHDYVVGIRLVVPASAAEGFA 174 (557)
T ss_pred HHHHHHcCCE--------ecc-------CC--CCC-CeEeeEhhhCCCCCccccccccchhheEEEEEEEeCCCcccCcc
Confidence 9876432111 110 11 122 25999999876443322 1112334444443222 11
Q ss_pred cEEEEEhH---hHhccCccccCCCceEEEEEEecCCC
Q 000775 338 NIRTTMAE---EFFLGYRKVDLTSGEILLSIFLPWTR 371 (1291)
Q Consensus 338 ~~R~vpl~---dF~~g~~~t~L~~~Eii~~I~iP~~~ 371 (1291)
..+++.-. |+|..-+ ..+..=-||+++.+...+
T Consensus 175 ~v~~~s~~~~~dLf~a~r-gslG~lGVVtevTL~~~P 210 (557)
T TIGR01677 175 KVRILSEGDTPNEFNAAK-VSLGVLGVISQVTLALQP 210 (557)
T ss_pred eEEEeCCCCCHHHHHhhc-cCCCccEeeeEEEEEEEc
Confidence 23444332 3443211 122222489999887653
No 54
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.01 E-value=0.32 Score=57.20 Aligned_cols=85 Identities=18% Similarity=0.211 Sum_probs=57.8
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhcC----CCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEE-EcC-CeE
Q 000775 182 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLN-VKD-DGL 255 (1291)
Q Consensus 182 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~-~~~-~~l 255 (1291)
.++.+ |..-..|+.|.|.+|+.++++.. -...+|.||+.+++. ...-+..+|.+.++.++...+ .++ ..|
T Consensus 22 tT~rI-GG~A~~~~~p~s~~el~~~l~~~~~~~~p~~iLG~GSNlL~~---D~g~~G~VI~l~~~~~i~i~~~~~~~~~v 97 (354)
T PRK14648 22 CSFRI-GGAAQFWAEPRSCTQLRALIEEAQRARIPLSLIGGGSNVLIA---DEGVPGLMLSLRRFRSLHTQTQRDGSVLV 97 (354)
T ss_pred ceeee-CcEEEEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEe---CCCccEEEEEeCCcCceEEeeccCCcEEE
Confidence 34556 55456789999999999988632 137789999999872 222346788775544442111 233 369
Q ss_pred EEcccCcHHHHHHHh
Q 000775 256 EIGAAVRLTELLKMF 270 (1291)
Q Consensus 256 ~IGA~vTl~~l~~~l 270 (1291)
++||++.+.++....
T Consensus 98 ~agAG~~~~~Lv~~~ 112 (354)
T PRK14648 98 HAGAGLPVAALLAFC 112 (354)
T ss_pred EEEeCCcHHHHHHHH
Confidence 999999999998863
No 55
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=93.98 E-value=0.35 Score=55.17 Aligned_cols=154 Identities=18% Similarity=0.285 Sum_probs=98.7
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCc
Q 000775 183 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 262 (1291)
Q Consensus 183 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vT 262 (1291)
++.+ |. .-+|+.|.|.+|+.++++ -...++.||+-+++. ..--+..+|-+++ .+..++.++ ++||++.
T Consensus 14 t~ri-GG-~A~~~~p~~~~~l~~~~~--~p~~vlG~GSNlL~~---D~g~~g~vI~l~~--~~~~~~~~~---~a~AG~~ 81 (273)
T PRK14651 14 TLGV-GG-PAELWTVETHEQLAEATE--APYRVLGGGSNLLVS---DAGVPERVIRLGG--EFAEWDLDG---WVGGGVP 81 (273)
T ss_pred Eeec-Cc-eEEEEecCCHHHHHHHHC--CCeEEEeceeEEEEc---CCCcceEEEEECC--cceeEeECC---EEECCCc
Confidence 4555 54 334444999999999984 248899999999872 2212356676643 255565543 7999999
Q ss_pred HHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccc-cCC-CCChHHHHHhcCCEEEEEeCCCcEE
Q 000775 263 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASP-ISDLNPLWMASGAKFHIVDCKGNIR 340 (1291)
Q Consensus 263 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~-asp-~sD~~p~Llal~A~v~l~s~~g~~R 340 (1291)
+.++.....+ ..+. . +..++..+ |||||-+.+ +.- -.++.=.|.. |++.. +|+.+
T Consensus 82 ~~~l~~~~~~--~gl~--------G----lE~l~gIP----GTVGGAv~mNaGayG~ei~d~l~~----V~~~~-~g~~~ 138 (273)
T PRK14651 82 LPGLVRRAAR--LGLS--------G----LEGLVGIP----AQVGGAVKMNAGTRFGEMADALHT----VEIVH-DGGFH 138 (273)
T ss_pred HHHHHHHHHH--CCCc--------c----hhhhcCCC----cchhhHHHhhCCccccChheeEEE----EEEEE-CCCEE
Confidence 9999987422 2221 1 22233333 778887743 322 2233333322 33334 45589
Q ss_pred EEEhHhHhccCccccCCCceEEEEEEecCCC
Q 000775 341 TTMAEEFFLGYRKVDLTSGEILLSIFLPWTR 371 (1291)
Q Consensus 341 ~vpl~dF~~g~~~t~L~~~Eii~~I~iP~~~ 371 (1291)
+++-+|..-+||.+.++.+.+|+++.+...+
T Consensus 139 ~~~~~e~~f~YR~S~~~~~~iIl~a~f~l~~ 169 (273)
T PRK14651 139 QYSPDELGFGYRHSGLPPGHVVTRVRLKLRP 169 (273)
T ss_pred EEEHHHccccccccCCCCCEEEEEEEEEECC
Confidence 9999998889999999877799999887653
No 56
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=93.90 E-value=0.13 Score=64.50 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=69.1
Q ss_pred eEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHH
Q 000775 192 LKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 267 (1291)
Q Consensus 192 ~~~~~P~sl~eal~ll~---~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 267 (1291)
.-.++|+|.+|+.++++ ++. ...+.+|||.+.-..- ......+||++++..+..|..++..++++|++++.+|.
T Consensus 135 ~~Vv~P~s~eeV~~ivk~a~~~~ipv~prGgGts~~G~~~--~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~ 212 (555)
T PLN02805 135 DVVVFPRSEEEVSKIVKSCNKYKVPIVPYGGATSIEGHTL--APHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELN 212 (555)
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCcEEEECCCCCCCCCcc--CCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHH
Confidence 35789999999988775 332 3677889998841100 01225899999877666666677899999999999999
Q ss_pred HHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccccc
Q 000775 268 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 313 (1291)
Q Consensus 268 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~a 313 (1291)
+.|++.--.++ . .+. ..+||||+|++.
T Consensus 213 ~~L~~~Gl~~p--------~---------~p~--~~~TIGG~ia~n 239 (555)
T PLN02805 213 EYLEPYGLFFP--------L---------DPG--PGATIGGMCATR 239 (555)
T ss_pred HHHHHcCCEeC--------C---------CCc--cccChhhHhhCC
Confidence 98754321111 1 111 347999999865
No 57
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=93.28 E-value=0.18 Score=61.43 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=67.9
Q ss_pred eEEEecCCHHHHHHHHhcCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHh
Q 000775 192 LKWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 270 (1291)
Q Consensus 192 ~~~~~P~sl~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 270 (1291)
..+++|+|.+|+.++++... ..++++||++..-. ......+||++++..+-.+..+.+.++++|++++.+|.+.|
T Consensus 13 ~~v~~P~s~~ev~~~v~~a~~~v~~~G~Ghs~~~~----~~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~L 88 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQAAKPVRAVGSGHSFTDL----ACTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGPQL 88 (419)
T ss_pred CeEECCCCHHHHHHHHHHhCCCEEEEeCCCCCCCc----ccCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHHHH
Confidence 36899999999999887542 47888888665321 11235899998865444444557899999999999999876
Q ss_pred hhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccC
Q 000775 271 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 314 (1291)
Q Consensus 271 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~as 314 (1291)
.+.--. ++ ..++ + +..||||.|+++.
T Consensus 89 ~~~G~~--------l~-------~~~~--~-~~~tvGG~ia~~~ 114 (419)
T TIGR01679 89 AQRGLG--------LE-------NQGD--I-DPQSIGGALGTAT 114 (419)
T ss_pred HHcCCc--------cc-------cCCC--C-CCceeccceecCC
Confidence 432111 11 1222 2 3479999998753
No 58
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=91.88 E-value=2.9 Score=55.08 Aligned_cols=191 Identities=14% Similarity=0.108 Sum_probs=113.6
Q ss_pred CCCCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe-------cccCCCCCCCCCcchHHHH
Q 000775 702 YLEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT-------KRIGGGFGGKETRSAFIAA 769 (1291)
Q Consensus 702 ~mEp~~a~a~~~~e~g~l~V~~stQ~p-----~~~~~~vA~~Lglp~~kV~V~~-------~~vGGgFGgK~~~~~~~a~ 769 (1291)
.++..++.+..+ .||.++|++++.-. +.+.+.+|+.||+|.++|+|+. ++-+|.||++.+...-.++
T Consensus 457 ~~~~~~a~v~i~-~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av 535 (759)
T PRK09970 457 GLEIAGARLLMN-QDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAI 535 (759)
T ss_pred CCCcceEEEEEc-cCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHH
Confidence 366778888887 58999999999544 5668999999999999999983 4667888888753222111
Q ss_pred HH----------HHHHHhCCCCE---EE-----Eec----h---HHHHhhc-C--------------------CCCCeEE
Q 000775 770 AA----------AVPSFLLNRPV---NL-----TLD----R---DIDMMIS-G--------------------QRHSFLG 803 (1291)
Q Consensus 770 ~a----------AlaA~~~grPV---kl-----~~s----R---~e~~~~~-~--------------------~R~~~~~ 803 (1291)
.- .++|.+++-++ .+ ... + -.++... . .....-+
T Consensus 536 ~~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 615 (759)
T PRK09970 536 RKAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTTNPPAFGCT 615 (759)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCCCCCceEEE
Confidence 11 11233333222 01 000 0 0001000 0 0112334
Q ss_pred EEEEEEC-CCCcEEEEEEEEEecCCCCCCchH-------HHHHHHhhc-------c-----------CCCcccCeE----
Q 000775 804 KYKVGFT-NEGKVLALDLEIYNNAGNSLDLSL-------AVLERAMFH-------S-----------DNVYEIPNV---- 853 (1291)
Q Consensus 804 ~~k~g~~-~dG~i~a~~~~~~~d~Ga~~~~~~-------~~~~~~~~~-------~-----------~~~Y~ipn~---- 853 (1291)
-.++-+| ..|++.=+++....|+|-..+... +++ +++.. . ..-|.+|..
T Consensus 616 ~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~-qGiG~aL~E~~~~d~~~G~~~~~~~~dY~ip~~~d~P 694 (759)
T PRK09970 616 FVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMG-MGIGWALFEEMIIDEKTGVVRNPNLLDYKLPTMMDLP 694 (759)
T ss_pred EEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHH-HHHHHHhcceeEEcCCCCeECCCChhhccCCCcccCC
Confidence 4567777 589999999999999998765210 011 11110 0 113554433
Q ss_pred EEEEEEEeCCCCCCCc--cCCCChhhhHhHHHHHHHHHHHHcCC
Q 000775 854 RIMGNVCFTNFPSNTA--FRGFGGPQGMLITENWIQRVAVEVRK 895 (1291)
Q Consensus 854 ~~~~~~v~TN~~~~~a--~Rg~G~~q~~fa~E~~md~lA~~lg~ 895 (1291)
.++...+.++.++ +. -+|.|.+...-+.=.+.+-|++.+|.
T Consensus 695 ~i~v~~ve~~~~~-~p~GaKgvGE~~~~~~~~AIanAi~~A~G~ 737 (759)
T PRK09970 695 QLESAFVEIYEPQ-SAYGHKSLGEPPIISPAPAIRNAVLMATGV 737 (759)
T ss_pred CeEEEEEecCCCC-CCCCCcccCCCcccchHHHHHHHHHHhhCC
Confidence 3556666776553 44 67788887777777778888888875
No 59
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=91.08 E-value=0.49 Score=56.15 Aligned_cols=95 Identities=13% Similarity=0.088 Sum_probs=58.4
Q ss_pred HHHHHHHHhcCC-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCcHHHHHHHhhhhhhcCC
Q 000775 200 LQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERP 278 (1291)
Q Consensus 200 l~eal~ll~~~~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~ 278 (1291)
+.+++....++. ..++..|||.... +......+||++++..+-.++.++..++++|++++.||.+.|.+.-..++
T Consensus 7 v~~~v~~A~~~~~~v~~~GgGt~~~~----g~~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~~lp 82 (352)
T PRK11282 7 LLERVRQAAADGTPLRIRGGGSKDFY----GRALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQMLP 82 (352)
T ss_pred HHHHHHHHHHCCCeEEEECCCCCCCC----CCCCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCCeeC
Confidence 334444444543 3778888885422 11122458999986655555566788999999999999998654321111
Q ss_pred ccchhHHHHHHHHHHhhcCcceecceeecccccccC
Q 000775 279 AHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 314 (1291)
Q Consensus 279 ~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~as 314 (1291)
+--+.....+||||+|+++.
T Consensus 83 ----------------~~p~~~~~~~TIGG~iatg~ 102 (352)
T PRK11282 83 ----------------FEPPHFGGGATLGGMVAAGL 102 (352)
T ss_pred ----------------CCCCCcCCCcEehhHHhcCC
Confidence 01112333589999998653
No 60
>PLN02441 cytokinin dehydrogenase
Probab=90.84 E-value=2.7 Score=52.45 Aligned_cols=158 Identities=12% Similarity=0.079 Sum_probs=88.0
Q ss_pred CeEEEecCCHHHHHHHHhcC-----C-CcEEEEccchhhHHHHhcCCCccEEEeCCCCCC------CccEEEcCCeEEEc
Q 000775 191 GLKWYRPLKLQHLLELKSKY-----P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPE------LNVLNVKDDGLEIG 258 (1291)
Q Consensus 191 ~~~~~~P~sl~eal~ll~~~-----~-~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~E------L~~I~~~~~~l~IG 258 (1291)
....++|+|.+|+.++++.. + ..++.+||++..- ........+||++++.. +..+..+...+++|
T Consensus 65 P~aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G---~a~~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~ 141 (525)
T PLN02441 65 PAAVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNG---QAQAPGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVS 141 (525)
T ss_pred CCEEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCC---CccCCCeEEEECCCCCCcCccCceEEEcCCCCEEEEc
Confidence 34689999999999987643 1 2456678887742 11122368999998776 23334456789999
Q ss_pred ccCcHHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeecccccccCCCCC--hHHHHHhcCCEEEEEeCC
Q 000775 259 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISD--LNPLWMASGAKFHIVDCK 336 (1291)
Q Consensus 259 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~~asp~sD--~~p~Llal~A~v~l~s~~ 336 (1291)
|++++.++.+.+.+. .+. ..+..=-+..|+||+|.++.-.+- -.-.+...=-.++|+..+
T Consensus 142 aG~~~~dv~~~l~~~--Gla----------------P~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~Vl~leVVtad 203 (525)
T PLN02441 142 GGELWIDVLKATLKH--GLA----------------PRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLELDVVTGK 203 (525)
T ss_pred CCCCHHHHHHHHHHC--CCc----------------cCCccccCceEEeEEcCCCCccccccccCcHHHhEEEEEEEeCC
Confidence 999999998864321 110 011111235799999998532110 000111111234556666
Q ss_pred CcEEEEEh---HhHhccCccccCCCceEEEEEEecCC
Q 000775 337 GNIRTTMA---EEFFLGYRKVDLTSGEILLSIFLPWT 370 (1291)
Q Consensus 337 g~~R~vpl---~dF~~g~~~t~L~~~Eii~~I~iP~~ 370 (1291)
|..++..- .|+|..-+- .+..=-|||++.|...
T Consensus 204 Gevv~~s~~~n~DLF~Av~G-glG~fGIIT~atlrL~ 239 (525)
T PLN02441 204 GEVVTCSPTQNSDLFFAVLG-GLGQFGIITRARIALE 239 (525)
T ss_pred ceEEEeCCCCChhHHHhhcc-CCCCcEEEEEEEEEEE
Confidence 74444432 244432110 1222248999888654
No 61
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=89.05 E-value=6.5 Score=51.69 Aligned_cols=59 Identities=10% Similarity=0.179 Sum_probs=46.8
Q ss_pred CCCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------cCCCCCCCCC
Q 000775 703 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTKR------IGGGFGGKET 762 (1291)
Q Consensus 703 mEp~~a~a~~~~e~g~l~V~~stQ~p-----~~~~~~vA~~Lglp~~kV~V~~~~------vGGgFGgK~~ 762 (1291)
..+.++.+..+ .||.++|+++++.. +.+++.+|+.||+|.++|+|.... -+|.+|++.+
T Consensus 442 ~~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 442 EPHATVALKLD-FDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CCCceEEEEEc-CCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 34567777776 58999999988765 567899999999999999998654 5677777765
No 62
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=89.01 E-value=5.3 Score=53.16 Aligned_cols=97 Identities=39% Similarity=0.710 Sum_probs=92.1
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhCc
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGN 82 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~gn 82 (1291)
++||||++|+.+++|++|+|||||+ . ..+||||+||+++|++|||||||||||++++||+++|+| +++||+++|+||
T Consensus 50 ~~~~sc~~~~~~~~g~~i~T~egl~-~-~~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~~~~~p-~~~~i~~~l~gn 126 (848)
T TIGR03311 50 KAVRACRFTTAKLAGKEITTVEGLT-E-REKDVYAWAFAKAGAVQCGFCIPGMVISAKALLDKNPNP-TEAEIKKALKGN 126 (848)
T ss_pred eEEehhhhhHHhcCCCEEEecCCCC-C-CCCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHhcCCCC-CHHHHHHHHhcC
Confidence 6899999999999999999999997 3 347999999999999999999999999999999999999 999999999999
Q ss_pred ccccCCChhHHHHHHHHHhc
Q 000775 83 LCRCTGYRPIVDAFRVFAKT 102 (1291)
Q Consensus 83 lCrCtgy~~i~~a~~~~~~~ 102 (1291)
|||||||++|++|++.++..
T Consensus 127 lcrctgy~~i~~a~~~~~~~ 146 (848)
T TIGR03311 127 ICRCTGYVKIIKAVRLAAKA 146 (848)
T ss_pred ccccCChHHHHHHHHHHHHh
Confidence 99999999999999988654
No 63
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=86.79 E-value=6.8 Score=52.70 Aligned_cols=98 Identities=26% Similarity=0.381 Sum_probs=94.1
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhCc
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGN 82 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~gn 82 (1291)
++|+||++|+.+++|++|+|||||+ ..+.|||+|+||+++|++|||||||||||++++||+++++| +++||+++|+||
T Consensus 54 ~~v~sC~~~~~~~~g~~i~Tvegl~-~~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~~~~~p-~~~~i~~~l~gn 131 (956)
T PRK09800 54 NIVNASLLIAAQLEKADIRTAESLG-KWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAP-TREEIDDALSGL 131 (956)
T ss_pred eEEeHHHHHHHHcCCCEEEecCCcC-CCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhhc
Confidence 6899999999999999999999998 56789999999999999999999999999999999999999 999999999999
Q ss_pred ccccCCChhHHHHHHHHHhc
Q 000775 83 LCRCTGYRPIVDAFRVFAKT 102 (1291)
Q Consensus 83 lCrCtgy~~i~~a~~~~~~~ 102 (1291)
|||||||++|++|++.++..
T Consensus 132 lCRCtgy~~i~~av~~~~~~ 151 (956)
T PRK09800 132 FSRDAGWQQYYQVIELAVAR 151 (956)
T ss_pred hhccCCcHHHHHHHHHHHHh
Confidence 99999999999999987654
No 64
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=85.31 E-value=13 Score=50.08 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=93.8
Q ss_pred cccccchhhHhccCCCEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhhCc
Q 000775 3 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGN 82 (1291)
Q Consensus 3 ~~v~sCl~~~~~~~g~~i~Tvegl~~~~~~~~~vq~~~~~~~~~qCg~Ctpg~vm~~~~ll~~~~~~~~~~~i~~~~~gn 82 (1291)
++||||++|+.+++|++|+|||||+ ..+.|||+|+||++++++|||||||||||++++||+++++| +++||+++|+||
T Consensus 50 ~~v~sC~~~~~~~~g~~i~Tiegl~-~~~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~~~~~p-~~~~i~~~l~gn 127 (951)
T TIGR03313 50 VLKNASLLIAAQLEGAEVRTAESLG-QWNQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLDRNTQP-NRAEIDDALSGL 127 (951)
T ss_pred eEeeHHHHHHHHcCCCEEEecCcCC-CCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhcc
Confidence 6899999999999999999999998 56789999999999999999999999999999999999999 999999999999
Q ss_pred ccccCCChhHHHHHHHHHhc
Q 000775 83 LCRCTGYRPIVDAFRVFAKT 102 (1291)
Q Consensus 83 lCrCtgy~~i~~a~~~~~~~ 102 (1291)
|||||||++|++|++.++..
T Consensus 128 lcrctgy~~i~~av~~~~~~ 147 (951)
T TIGR03313 128 FSRDAGYQQFYQVIELAVKR 147 (951)
T ss_pred eeccCCcHHHHHHHHHHHHh
Confidence 99999999999999987653
No 65
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=79.97 E-value=23 Score=46.88 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=43.4
Q ss_pred CCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhh
Q 000775 973 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSD 1043 (1291)
Q Consensus 973 ~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~ 1043 (1291)
+...++....+.||+++|.++... . ..+...+|+.||+|.++|+|... +-+|.+|++...
T Consensus 182 mEp~~~~A~~~~~g~l~v~~stQ~----p-~~~r~~lA~~Lglp~~~VrV~~~------~vGGgFG~K~~~ 241 (768)
T TIGR03196 182 LAPEAALAMPAADGGFDLRAATQH----G-HKDREQIAACFDIPEEKIRITLA------GMGGAFGGKDDL 241 (768)
T ss_pred cCCceEEEEEcCCCCEEEEECCCc----h-HHHHHHHHHHhCCCHHHEEEEeC------CCCCccCCcccc
Confidence 344556666666899999987543 3 34567888999999999999844 456777777554
No 66
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=71.22 E-value=7.2 Score=51.51 Aligned_cols=70 Identities=16% Similarity=0.203 Sum_probs=51.0
Q ss_pred CeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCCcchHHHHHHHHH
Q 000775 706 HSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAAAVP 774 (1291)
Q Consensus 706 ~~a~a~~~~e~g~l~V~~stQ~p-----~~~~~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~~~~~~a~~aAla 774 (1291)
..+.+..+ .||.++|+++++.. +.+.+.+|+.||+|.++|+|... +-+|.||++.+.. ...++-.|
T Consensus 476 ~~a~v~l~-~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~--~G~Av~~A 552 (770)
T TIGR02416 476 DSCEIRIH-PTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPV--AGAATALA 552 (770)
T ss_pred ceEEEEEC-CCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHH--HHHHHHHH
Confidence 45667776 48999999998765 56688999999999999999854 4468888887532 23333345
Q ss_pred HHhC
Q 000775 775 SFLL 778 (1291)
Q Consensus 775 A~~~ 778 (1291)
|.++
T Consensus 553 a~~l 556 (770)
T TIGR02416 553 ARKI 556 (770)
T ss_pred HHHH
Confidence 5555
No 67
>PLN00192 aldehyde oxidase
Probab=64.92 E-value=1.2e+02 Score=42.71 Aligned_cols=59 Identities=20% Similarity=0.127 Sum_probs=43.8
Q ss_pred CCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhh
Q 000775 973 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASS 1042 (1291)
Q Consensus 973 ~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t 1042 (1291)
+...++....+.||.++|+++... . +.+...+|+.||||.++|+|.. +.-+|.+|++.+
T Consensus 761 mEp~~~vA~~~~dg~l~V~~sTQ~----p-~~~r~~vA~~Lgip~~~VrV~~------~~vGGgFGgK~~ 819 (1344)
T PLN00192 761 METQTALALPDEDNCIVVYSSTQC----P-EYVHSVIARCLGIPEHNVRVIT------RRVGGGFGGKAV 819 (1344)
T ss_pred ccCceEEEEEcCCCCEEEEECCCC----H-HHHHHHHHHHhCCChHHEEEEe------cccccCCCcccc
Confidence 445566776677899999987543 2 4567789999999999999984 445677777754
No 68
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=64.26 E-value=13 Score=48.97 Aligned_cols=58 Identities=9% Similarity=0.138 Sum_probs=45.9
Q ss_pred CCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCC
Q 000775 704 EPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT------KRIGGGFGGKET 762 (1291)
Q Consensus 704 Ep~~a~a~~~~e~g~l~V~~stQ~p-----~~~~~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~ 762 (1291)
.+..+.+..+ +||+++|+++++.. +.+.+.+|+.||+|.++|+|.. +.-+|.+|++.+
T Consensus 446 ~~~~a~v~i~-~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t 514 (758)
T TIGR02965 446 NQAGALVHVY-TDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGS 514 (758)
T ss_pred CccceEEEEe-CCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHH
Confidence 3456677776 48899999999764 5567889999999999999985 456777888865
No 69
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=63.52 E-value=33 Score=39.04 Aligned_cols=145 Identities=14% Similarity=0.208 Sum_probs=88.6
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhcCCCccEEEeCCCCCCCccEEEcCCeEEEcccCc
Q 000775 183 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 262 (1291)
Q Consensus 183 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvAGgTdl~~~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vT 262 (1291)
++.+ |..-.-|+.|.+.+ + .. ...++.+|+.+++. .+. ...+| + ..+++.++.+++.|++||++.
T Consensus 12 t~~i-GG~A~~~~~~~~~~-l-----~~-p~~vlG~GSNlLv~--D~g--~~~vv-~--~~~~~~~~~~~~~v~~~AG~~ 76 (257)
T PRK13904 12 SVKI-GPPLEVLVLEEIDD-F-----SQ-DGQIIGGANNLLIS--PNP--KNLAI-L--GKNFDYIKIDGECLEIGGATK 76 (257)
T ss_pred ceeE-CceEEEEEEechhh-h-----CC-CeEEEeceeEEEEe--cCC--ccEEE-E--ccCcCeEEEeCCEEEEEcCCc
Confidence 4555 55344567787777 4 22 48899999999873 222 34555 2 234777787888999999999
Q ss_pred HHHHHHHhhhhhhcCCccchhHHHHHHHHHHhhcCcceecceeeccccc-ccCC-CCChHHHHHhcCCEEEEEeCCCcEE
Q 000775 263 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP-ISDLNPLWMASGAKFHIVDCKGNIR 340 (1291)
Q Consensus 263 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNI~-~asp-~sD~~p~Llal~A~v~l~s~~g~~R 340 (1291)
+.++.....+ ..+ .. +..++..+ |||||-+. ||.- -.++.-+|. +|++.+ +
T Consensus 77 l~~l~~~~~~--~gl--------~G----lE~l~gIP----GtVGGAv~mNaGa~g~ei~d~l~----~V~~~~--~--- 129 (257)
T PRK13904 77 SGKIFNYAKK--NNL--------GG----FEFLGKLP----GTLGGLVKMNAGLKEYEISNNLE----SICTNG--G--- 129 (257)
T ss_pred HHHHHHHHHH--CCC--------ch----hhhhcCCC----ccHHHHHHhcCCcCccchheeEE----EEEEEe--e---
Confidence 9999986322 121 11 23334443 78888775 3322 122222221 133333 2
Q ss_pred EEEhHhHhccCccccCCCceEEEEEEecCCC
Q 000775 341 TTMAEEFFLGYRKVDLTSGEILLSIFLPWTR 371 (1291)
Q Consensus 341 ~vpl~dF~~g~~~t~L~~~Eii~~I~iP~~~ 371 (1291)
+++-+|.--+||.+.++ ++|+++.+-..+
T Consensus 130 ~~~~~e~~f~YR~S~~~--~iIl~a~f~l~~ 158 (257)
T PRK13904 130 WIEKEDIGFGYRSSGIN--GVILEARFKKTH 158 (257)
T ss_pred EEeHHHCcccccCcCCC--cEEEEEEEEECC
Confidence 57888887789988876 488888776553
No 70
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=60.81 E-value=23 Score=44.99 Aligned_cols=191 Identities=16% Similarity=0.130 Sum_probs=95.0
Q ss_pred CCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccch-hhhHHHHHHHH
Q 000775 973 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASA-SSDIYGAAVLD 1051 (1291)
Q Consensus 973 ~~~~~a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr-~t~~~g~Av~~ 1051 (1291)
+....+....+.||.++|.++..- -..+...+|+.||||+++|+|... .-+|.+|++ ......-.+..
T Consensus 48 mEp~~~~A~~~~~g~l~v~~~tQ~-----p~~~r~~va~~lglp~~~V~V~~~------~~GGgFG~~~~~~~~~~~aa~ 116 (547)
T PF02738_consen 48 MEPHGAVAWWDEDGRLTVWSSTQW-----PFHVRRAVAEALGLPPEKVRVISP------YVGGGFGKKKQDSPIAVLAAL 116 (547)
T ss_dssp SS-SEEEEEEETTTEEEEEES-SS-----HHHHHHHHHHHHTS-GGGEEEEES------B-S--TTTTSSTHHHHHHHHH
T ss_pred CCCCeEEEEEccCCCEEEEECCcC-----HhHHHHHHhhhhcCChhHEEEeee------ecCCCCCCccccchHHHHHHH
Confidence 445567777777999999987543 345678889999999999999854 445556632 23323333333
Q ss_pred HHHHHHHHHHHHhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEeeeCCCCcEE
Q 000775 1052 ACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFH 1131 (1291)
Q Consensus 1052 Ac~~L~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVEVD~~TG~v~ 1131 (1291)
+++++++ |++-. .+-+|-... +.+ -.-..+-.++-+|. .|++.
T Consensus 117 ~a~~~gr---PVk~~---~tR~e~~~~-----------~~~-------------------r~~~~~~~~~g~~~-dG~i~ 159 (547)
T PF02738_consen 117 AAKKTGR---PVKLV---WTREEDFRA-----------GPK-------------------RPPTRIRVRAGADK-DGKIT 159 (547)
T ss_dssp HHHHHSS---EEEEE-----HHHHHHH-----------S-B-------------------B-EEEEEEEEEE-T-TS-EE
T ss_pred HHhccCc---eEEEE---echHHhcCC-----------CCC-------------------ccHHHhhhhheECC-CCCEE
Confidence 3343321 11100 111111100 000 01112344666774 79999
Q ss_pred EEEEEEEEecCcccCccchhhhhhhHHHHHHHHHhcceeEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEec
Q 000775 1132 TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLK 1211 (1291)
Q Consensus 1132 V~r~~~~~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~ 1211 (1291)
=.++.+..|.|-.-+... .+...+.... ..-|++|.. +++...+.
T Consensus 160 a~~~~~~~d~Ga~~~~~~--------~~~~~~~~~~----------------------~~~Y~ipn~-----~~~~~~v~ 204 (547)
T PF02738_consen 160 ALDHDIYADGGAYASFSP--------AVAPRAGAGA----------------------DGPYRIPNV-----RIDARAVY 204 (547)
T ss_dssp EEEEEEEEEEESS-TTHH--------HHHHHHHHTT----------------------TTTB--SEE-----EEEEEEEE
T ss_pred EeeeeeeccCCccccccc--------cchhhhhccc----------------------CCCcccccE-----EEEEEecc
Confidence 999999999986543221 1111111110 233554421 23444454
Q ss_pred CCCCCCCCCCcccCCccCccchhhHHHHHHHHHHHHHHhcCCC
Q 000775 1212 GHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHT 1254 (1291)
Q Consensus 1212 ~~~~~~~~~gaKgvGE~~~~~a~av~~Ai~nAi~~A~~~~G~~ 1254 (1291)
+...|.+.| +|.|.+.. .+|+...+..+..+.|.+
T Consensus 205 Tn~~~~g~~--Rg~G~~q~------~fa~E~~~DelA~~lg~D 239 (547)
T PF02738_consen 205 TNTPPAGAF--RGFGAPQA------AFALESFMDELAEKLGMD 239 (547)
T ss_dssp -SSSSBE-S--TTTTHHHH------HHHHHHHHHHHHHHHTS-
T ss_pred CCCCCCCcC--CCCCHHHH------HHHHHHHHHHHHHHhCcC
Confidence 423344555 47777653 578888888877666653
No 71
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=57.07 E-value=37 Score=31.26 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=39.6
Q ss_pred EEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000775 978 ALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1028 (1291)
Q Consensus 978 a~V~i~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1028 (1291)
....++.||.+.|..-....--=.+..+....|+.||+|..+|.|..+.|.
T Consensus 18 ~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v~ks~i~i~~G~~S 68 (77)
T PF02594_consen 18 AIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGVPKSDIEIVSGHTS 68 (77)
T ss_dssp EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT--TTCEEECC-CCC
T ss_pred ccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCCCcccEEEEecCCC
Confidence 344677778999998888888779999999999999999999999988764
No 72
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=54.75 E-value=21 Score=50.00 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=46.9
Q ss_pred CCCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCC
Q 000775 703 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKET 762 (1291)
Q Consensus 703 mEp~~a~a~~~~e~g~l~V~~stQ~p-----~~~~~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~ 762 (1291)
+...++++..+ .||.++|+++++.. +.+.+.+|+.||||.++|+|... +-+|.+|++.+
T Consensus 1015 ~~~~~a~v~i~-~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t 1084 (1330)
T TIGR02969 1015 MGQAAALVHIY-LDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVA 1084 (1330)
T ss_pred CCCccEEEEEc-CCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHH
Confidence 44567777776 48999999998655 55678899999999999999864 34788888865
No 73
>PLN02906 xanthine dehydrogenase
Probab=52.85 E-value=27 Score=48.94 Aligned_cols=60 Identities=10% Similarity=0.142 Sum_probs=46.7
Q ss_pred CCCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCCc
Q 000775 703 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT------KRIGGGFGGKETR 763 (1291)
Q Consensus 703 mEp~~a~a~~~~e~g~l~V~~stQ~p-----~~~~~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~ 763 (1291)
+.+..+.+..+ .||.++|+++++.. ..+.+.+|+.||+|.++|+|.. +.-+|.+|++.+.
T Consensus 1010 ~~~~~a~V~i~-~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t~ 1080 (1319)
T PLN02906 1010 MNQAGALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSD 1080 (1319)
T ss_pred CCccceEEEEc-CCceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhhH
Confidence 44566777776 48899999987544 4567889999999999999985 4457888888753
No 74
>PRK12386 fumarate reductase iron-sulfur subunit; Provisional
Probab=48.26 E-value=10 Score=42.91 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=24.4
Q ss_pred ccccccchhhHhccCCCEEEEeccccC
Q 000775 2 HCAVNACLAPLYSLEGMHVITVEGVGN 28 (1291)
Q Consensus 2 ~~~v~sCl~~~~~~~g~~i~Tvegl~~ 28 (1291)
-+|+.||++++.+++|.+++|||+|.+
T Consensus 67 G~p~laC~t~~~~~~~~~~itiepl~~ 93 (251)
T PRK12386 67 GRPRLMCMTRMSTFDEDETVTVTPMRT 93 (251)
T ss_pred ccEeccHHhHHHHhCCCCeEEEccCCC
Confidence 368999999999999999999999973
No 75
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=46.68 E-value=76 Score=29.52 Aligned_cols=62 Identities=15% Similarity=0.270 Sum_probs=43.2
Q ss_pred EEEeecCccchhhcceEEEEEEecCCcceEEEEEEEEEecCCCccccHHHHHHHHcCCCCCHHHHHHHHHHh
Q 000775 379 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKIL 450 (1291)
Q Consensus 379 ~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l 450 (1291)
|...+|... -.|.+ .+.++ +| +|++++|.=--+.... ..++|+.|.|.+.+.+.+.++++.+
T Consensus 7 ~~~~~rf~~--G~v~v--~~~V~-~G---~I~~i~i~gDf~~~~~--i~~le~~L~G~~~~~~~i~~~l~~~ 68 (86)
T PF10437_consen 7 FSKERRFPW--GTVEV--HLNVK-NG---IIKDIKIYGDFFGPED--IEELEEALIGCPYDREAIKEALNSV 68 (86)
T ss_dssp EEEEEEETT--EEEEE--EEEEE-TT---EEEEEEEEECBS-CCC--HHHHHHHHTTCBSSHHHHHHHHHHC
T ss_pred EeeeeEcCC--ceEEE--EEEEE-CC---EEEEEEEECCCCCchH--HHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 344444333 44444 45555 46 9999999743444433 7899999999999999999999887
No 76
>PF08869 XisI: XisI protein; InterPro: IPR014968 The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required []. ; PDB: 3D7Q_A 2NWV_A 2NVM_A 2NLV_B.
Probab=37.80 E-value=54 Score=32.38 Aligned_cols=40 Identities=25% Similarity=0.539 Sum_probs=29.9
Q ss_pred eeEEEEEe-cCCeEEEEEcCccCCcchHHHHHHHHHHHh---CCCcccEEEecC
Q 000775 976 AGALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSET 1025 (1291)
Q Consensus 976 ~~a~V~i~-~DGsV~V~~g~~e~GqG~~T~~~qiaAe~L---gip~~~V~v~~~ 1025 (1291)
.++.++++ .||+|-|..-++|.| +|+.| |||.++|-+.--
T Consensus 55 ~g~~iH~dI~dgKIWIq~d~TE~g----------Ia~eLve~GVpk~dIVLgF~ 98 (111)
T PF08869_consen 55 HGCLIHLDIKDGKIWIQRDGTEDG----------IAEELVEAGVPKEDIVLGFH 98 (111)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSH----------HHHHHHHTT--GGGEEETTS
T ss_pred EEEEEEEEEECCeEEEEcCchhhH----------HHHHHHHcCCCHHHEEEccC
Confidence 45777776 799999999999998 34444 999999987643
No 77
>PRK00647 hypothetical protein; Validated
Probab=27.55 E-value=1.4e+02 Score=28.79 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=39.3
Q ss_pred cCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000775 984 TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1028 (1291)
Q Consensus 984 ~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1028 (1291)
.+|.+.|..-..+.---.+..+.+..|+.||+|..+|.|..+.|.
T Consensus 25 ~~~~Lkvrv~ApPvdGKAN~ali~~LAk~l~vpks~I~Iv~G~tS 69 (96)
T PRK00647 25 EGGILKVRVTEVPEKGKANDAVIALLAKFLSLPKRDVTLIAGETS 69 (96)
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 357788888888887779999999999999999999999988765
No 78
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=26.08 E-value=58 Score=32.17 Aligned_cols=31 Identities=10% Similarity=0.270 Sum_probs=25.6
Q ss_pred cchHHHHHHHHHHHhCCCcccEEEecCCCCC
Q 000775 999 QGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1029 (1291)
Q Consensus 999 qG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~ 1029 (1291)
+-+...++..+++.||||+++|.|.-.|...
T Consensus 75 ~~l~~~i~~~l~~~lgi~~~rv~I~f~~~~~ 105 (116)
T PTZ00397 75 SSIAAAITKILASHLKVKSERVYIEFKDCSA 105 (116)
T ss_pred HHHHHHHHHHHHHHhCcCcccEEEEEEECCh
Confidence 3466778999999999999999998776544
No 79
>PRK05090 hypothetical protein; Validated
Probab=22.33 E-value=2e+02 Score=27.69 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=38.5
Q ss_pred cCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000775 984 TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1028 (1291)
Q Consensus 984 ~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1028 (1291)
.+|.+.|..-....--=.+..+....|+.||+|..+|.|..+.|.
T Consensus 30 ~~~~lkv~v~ApPveGkAN~ali~~LAk~l~v~ks~I~i~~G~ts 74 (95)
T PRK05090 30 HGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEKGELG 74 (95)
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 467788887777776668999999999999999999999988765
No 80
>PTZ00450 macrophage migration inhibitory factor-like protein; Provisional
Probab=22.09 E-value=63 Score=32.03 Aligned_cols=28 Identities=18% Similarity=0.290 Sum_probs=24.2
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCC
Q 000775 1000 GLHTKVAQVAASAFNIPLSSVFVSETST 1027 (1291)
Q Consensus 1000 G~~T~~~qiaAe~Lgip~~~V~v~~~dT 1027 (1291)
.+...++++..+.||||.++|.|.-.|.
T Consensus 76 ~~s~~i~~~l~~~LgIp~dRiYI~f~d~ 103 (113)
T PTZ00450 76 MMTPRITAAITKECGIPAERIYVFYYST 103 (113)
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEEEcH
Confidence 3566789999999999999999998874
No 81
>PRK01530 hypothetical protein; Reviewed
Probab=21.03 E-value=2.1e+02 Score=28.12 Aligned_cols=44 Identities=7% Similarity=0.052 Sum_probs=37.1
Q ss_pred CCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000775 985 DGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1028 (1291)
Q Consensus 985 DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1028 (1291)
+|.+.|..-..+.--=.+..+....|..||||..+|.|..+.|.
T Consensus 38 ~~~Lki~v~ApPvdGkAN~ali~~LAk~l~v~ks~I~IvsG~tS 81 (105)
T PRK01530 38 IPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTH 81 (105)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 45777777777766668899999999999999999999988765
Done!