Query 000777
Match_columns 1288
No_of_seqs 595 out of 4287
Neff 8.4
Searched_HMMs 46136
Date Mon Apr 1 23:31:28 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000777.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000777hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 2E-214 4E-219 1957.1 129.4 1215 43-1284 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 1E-172 2E-177 1714.0 153.9 1222 42-1282 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 1E-162 3E-167 1535.5 125.9 1140 72-1285 214-1378(1381)
4 PLN03130 ABC transporter C fam 100.0 2E-155 3E-160 1563.5 148.7 1155 62-1284 304-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 4E-154 8E-159 1553.7 146.3 1153 62-1285 304-1474(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 1E-149 2E-154 1512.5 148.1 1185 63-1282 321-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 2E-144 5E-149 1454.2 146.8 1167 62-1283 247-1547(1560)
8 TIGR01271 CFTR_protein cystic 100.0 7E-141 1E-145 1421.7 148.3 1176 68-1283 89-1453(1490)
9 KOG0058 Peptide exporter, ABC 100.0 1E-109 2E-114 975.1 67.1 574 706-1285 134-707 (716)
10 KOG0058 Peptide exporter, ABC 100.0 4E-106 8E-111 945.1 68.8 575 43-624 132-706 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 1.6E-99 4E-104 936.8 72.0 579 42-623 648-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 7.7E-94 1.7E-98 882.0 71.9 568 707-1283 142-709 (709)
13 COG2274 SunT ABC-type bacterio 100.0 8.1E-90 1.8E-94 846.4 73.3 568 45-622 141-708 (709)
14 COG1132 MdlB ABC-type multidru 100.0 3.6E-86 7.8E-91 826.4 73.9 554 717-1284 13-566 (567)
15 PRK11174 cysteine/glutathione 100.0 6.6E-86 1.4E-90 829.1 74.5 569 707-1285 10-587 (588)
16 COG4988 CydD ABC-type transpor 100.0 5.7E-85 1.2E-89 754.2 69.4 552 724-1284 5-557 (559)
17 TIGR00958 3a01208 Conjugate Tr 100.0 5.8E-85 1.3E-89 830.8 73.3 564 706-1279 148-711 (711)
18 PRK11174 cysteine/glutathione 100.0 5.8E-84 1.3E-88 811.5 76.0 568 45-623 9-585 (588)
19 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.2E-84 9.1E-89 824.7 75.8 555 714-1282 131-685 (686)
20 TIGR01193 bacteriocin_ABC ABC- 100.0 1E-83 2.2E-88 824.1 74.2 564 707-1280 144-707 (708)
21 PTZ00265 multidrug resistance 100.0 2.8E-83 6E-88 855.5 76.5 570 46-622 813-1465(1466)
22 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.5E-83 7.6E-88 820.2 73.7 563 707-1279 142-709 (710)
23 PRK11160 cysteine/glutathione 100.0 1.5E-82 3.3E-87 791.6 74.5 564 709-1281 6-573 (574)
24 TIGR00958 3a01208 Conjugate Tr 100.0 1.5E-82 3.3E-87 808.7 75.1 564 44-618 147-710 (711)
25 KOG0056 Heavy metal exporter H 100.0 6.4E-86 1.4E-90 725.3 37.7 508 773-1287 271-780 (790)
26 COG1132 MdlB ABC-type multidru 100.0 3.4E-82 7.3E-87 790.7 76.2 561 47-623 5-565 (567)
27 PRK11176 lipid transporter ATP 100.0 6.5E-82 1.4E-86 792.7 74.4 565 710-1283 16-580 (582)
28 TIGR03375 type_I_sec_LssB type 100.0 8.4E-82 1.8E-86 804.6 73.5 554 708-1270 136-689 (694)
29 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5E-81 1.1E-85 796.4 78.1 563 44-621 121-684 (686)
30 PRK10790 putative multidrug tr 100.0 3.4E-81 7.4E-86 786.3 75.0 562 710-1283 14-576 (592)
31 COG4987 CydC ABC-type transpor 100.0 1.2E-81 2.7E-86 711.9 63.5 505 769-1281 66-572 (573)
32 TIGR01846 type_I_sec_HlyB type 100.0 5.5E-81 1.2E-85 796.2 75.1 567 707-1283 127-693 (694)
33 TIGR01193 bacteriocin_ABC ABC- 100.0 8.8E-81 1.9E-85 796.9 76.4 565 44-620 142-707 (708)
34 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-81 3.6E-86 710.8 59.9 543 732-1284 43-588 (591)
35 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.7E-80 3.7E-85 795.4 75.9 564 45-619 141-709 (710)
36 PRK11160 cysteine/glutathione 100.0 3.5E-80 7.6E-85 770.4 76.0 566 46-620 4-572 (574)
37 COG4988 CydD ABC-type transpor 100.0 5.6E-80 1.2E-84 712.8 70.6 552 64-624 5-557 (559)
38 TIGR02203 MsbA_lipidA lipid A 100.0 1.1E-79 2.5E-84 771.8 74.3 564 710-1282 5-568 (571)
39 TIGR03375 type_I_sec_LssB type 100.0 1.3E-79 2.9E-84 784.3 75.4 556 45-610 134-689 (694)
40 PRK11176 lipid transporter ATP 100.0 1.6E-78 3.5E-83 761.9 77.0 565 47-622 14-579 (582)
41 PRK13657 cyclic beta-1,2-gluca 100.0 1.3E-78 2.9E-83 761.5 75.7 562 709-1282 9-570 (588)
42 TIGR02868 CydC thiol reductant 100.0 5.8E-79 1.3E-83 756.6 69.0 521 711-1241 5-529 (529)
43 TIGR01846 type_I_sec_HlyB type 100.0 4E-78 8.6E-83 769.9 77.7 568 44-622 125-692 (694)
44 TIGR02204 MsbA_rel ABC transpo 100.0 2.1E-78 4.5E-83 760.6 74.0 567 710-1282 9-575 (576)
45 TIGR01192 chvA glucan exporter 100.0 4.3E-78 9.3E-83 752.4 75.8 564 708-1283 8-571 (585)
46 PRK10790 putative multidrug tr 100.0 6.9E-78 1.5E-82 756.4 77.6 565 46-623 11-576 (592)
47 PRK10789 putative multidrug tr 100.0 2.7E-78 5.9E-83 753.5 72.6 542 734-1284 10-552 (569)
48 KOG0056 Heavy metal exporter H 100.0 1.5E-81 3.3E-86 690.8 37.4 549 66-625 222-777 (790)
49 COG5265 ATM1 ABC-type transpor 100.0 1.7E-80 3.7E-85 679.6 40.9 493 782-1280 3-496 (497)
50 TIGR02203 MsbA_lipidA lipid A 100.0 4.5E-77 9.8E-82 748.3 76.6 564 48-622 4-568 (571)
51 KOG0057 Mitochondrial Fe/S clu 100.0 7.5E-78 1.6E-82 681.2 61.9 555 61-623 32-587 (591)
52 TIGR02868 CydC thiol reductant 100.0 2.5E-77 5.5E-82 741.9 69.9 525 48-581 3-529 (529)
53 TIGR00957 MRP_assoc_pro multi 100.0 2.9E-77 6.2E-82 807.9 75.6 569 42-621 948-1519(1522)
54 TIGR01192 chvA glucan exporter 100.0 2.6E-76 5.6E-81 736.4 77.3 564 46-622 7-570 (585)
55 PRK13657 cyclic beta-1,2-gluca 100.0 2.9E-76 6.4E-81 740.3 77.8 564 46-622 7-570 (588)
56 PRK10789 putative multidrug tr 100.0 1.2E-76 2.5E-81 738.9 73.6 544 72-624 8-552 (569)
57 COG1123 ATPase components of v 100.0 5.5E-79 1.2E-83 709.3 46.6 484 383-1282 5-532 (539)
58 KOG0054 Multidrug resistance-a 100.0 1.3E-77 2.9E-82 761.3 62.8 571 39-620 796-1373(1381)
59 TIGR02204 MsbA_rel ABC transpo 100.0 6.2E-76 1.3E-80 738.2 76.3 568 47-621 7-574 (576)
60 PLN03130 ABC transporter C fam 100.0 2.4E-76 5.3E-81 796.3 77.1 570 41-623 896-1475(1622)
61 TIGR02857 CydD thiol reductant 100.0 4.2E-76 9E-81 731.0 71.0 527 719-1253 3-529 (529)
62 PTZ00243 ABC transporter; Prov 100.0 3.5E-75 7.6E-80 784.5 76.8 514 106-622 1001-1546(1560)
63 COG4987 CydC ABC-type transpor 100.0 4.8E-75 1E-79 658.3 65.2 506 108-620 63-571 (573)
64 TIGR01842 type_I_sec_PrtD type 100.0 1.1E-74 2.4E-79 718.8 72.8 538 717-1270 4-543 (544)
65 TIGR02857 CydD thiol reductant 100.0 9.7E-75 2.1E-79 718.8 71.4 525 61-593 5-529 (529)
66 PLN03232 ABC transporter C fam 100.0 4.8E-75 1E-79 785.2 73.4 570 41-623 893-1472(1495)
67 TIGR01842 type_I_sec_PrtD type 100.0 5.8E-73 1.3E-77 703.3 73.9 532 62-609 9-542 (544)
68 PRK10261 glutathione transport 100.0 1.4E-74 3.1E-79 723.1 51.6 504 382-1280 11-565 (623)
69 COG5265 ATM1 ABC-type transpor 100.0 6.1E-74 1.3E-78 628.0 42.1 491 125-620 4-496 (497)
70 PRK15134 microcin C ABC transp 100.0 2.2E-73 4.8E-78 704.0 52.4 471 383-1275 5-521 (529)
71 PRK13549 xylose transporter AT 100.0 6.7E-74 1.5E-78 704.8 46.8 463 383-1268 5-493 (506)
72 TIGR01271 CFTR_protein cystic 100.0 1.8E-71 4E-76 748.9 74.3 505 109-623 931-1453(1490)
73 COG4172 ABC-type uncharacteriz 100.0 1.3E-73 2.9E-78 619.7 42.4 473 383-1278 6-525 (534)
74 TIGR01194 cyc_pep_trnsptr cycl 100.0 8.7E-71 1.9E-75 683.4 67.3 533 707-1261 5-551 (555)
75 PRK09700 D-allose transporter 100.0 8.6E-73 1.9E-77 696.4 47.4 456 383-1266 5-495 (510)
76 PRK10762 D-ribose transporter 100.0 1.3E-72 2.9E-77 692.5 45.5 452 383-1268 4-483 (501)
77 COG4618 ArpD ABC-type protease 100.0 3E-71 6.6E-76 620.5 51.5 530 727-1270 31-561 (580)
78 TIGR03269 met_CoM_red_A2 methy 100.0 1.5E-72 3.2E-77 695.9 43.2 458 384-1269 1-517 (520)
79 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.1E-69 2.4E-74 673.5 69.0 535 44-601 3-551 (555)
80 PRK11288 araG L-arabinose tran 100.0 5.9E-72 1.3E-76 686.7 45.2 454 383-1268 4-484 (501)
81 TIGR02633 xylG D-xylose ABC tr 100.0 9.7E-72 2.1E-76 686.0 46.9 458 384-1267 2-490 (500)
82 PRK15439 autoinducer 2 ABC tra 100.0 2.6E-71 5.6E-76 681.1 48.8 466 383-1269 11-492 (510)
83 TIGR01257 rim_protein retinal- 100.0 2.2E-68 4.7E-73 705.8 77.3 220 382-610 927-1150(2272)
84 PRK10982 galactose/methyl gala 100.0 1.2E-70 2.7E-75 674.0 46.9 454 386-1267 1-478 (491)
85 PRK15064 ABC transporter ATP-b 100.0 1.4E-69 3.1E-74 670.2 51.4 482 384-1270 2-526 (530)
86 PRK10938 putative molybdenum t 100.0 3.6E-70 7.9E-75 670.3 45.6 453 384-1262 4-485 (490)
87 COG4618 ArpD ABC-type protease 100.0 4.9E-68 1.1E-72 594.7 54.7 530 66-610 30-561 (580)
88 TIGR00956 3a01205 Pleiotropic 100.0 3.9E-68 8.5E-73 710.2 57.7 214 1042-1266 759-990 (1394)
89 PRK10522 multidrug transporter 100.0 6.4E-66 1.4E-70 640.1 66.7 526 714-1270 8-540 (547)
90 PRK11819 putative ABC transpor 100.0 1.9E-67 4.2E-72 652.8 52.3 484 383-1270 6-534 (556)
91 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.2E-67 1.1E-71 649.2 53.2 484 383-1270 4-532 (552)
92 PRK10522 multidrug transporter 100.0 2.5E-64 5.5E-69 625.8 68.7 509 62-601 16-530 (547)
93 PRK10636 putative ABC transpor 100.0 7.7E-66 1.7E-70 644.3 50.4 200 1042-1268 312-516 (638)
94 PLN03140 ABC transporter G fam 100.0 2.5E-63 5.5E-68 659.9 64.1 214 1042-1265 867-1106(1470)
95 PRK11147 ABC transporter ATPas 100.0 6.9E-64 1.5E-68 629.0 52.4 202 1042-1269 319-528 (635)
96 PLN03073 ABC transporter F fam 100.0 3.2E-64 6.9E-69 629.4 46.0 201 1042-1268 508-713 (718)
97 TIGR00954 3a01203 Peroxysomal 100.0 5.1E-62 1.1E-66 612.1 63.0 530 46-595 79-653 (659)
98 COG1129 MglA ABC-type sugar tr 100.0 1E-63 2.2E-68 578.3 42.5 461 383-1266 8-487 (500)
99 TIGR00954 3a01203 Peroxysomal 100.0 2.7E-61 5.9E-66 605.5 62.4 528 707-1254 79-652 (659)
100 COG0488 Uup ATPase components 100.0 2.1E-62 4.5E-67 585.4 46.4 485 383-1270 3-526 (530)
101 PRK13409 putative ATPase RIL; 100.0 1.9E-63 4.1E-68 612.7 37.7 193 1042-1264 340-537 (590)
102 COG3845 ABC-type uncharacteriz 100.0 4.4E-61 9.6E-66 541.9 41.1 463 383-1266 4-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.7E-53 5.8E-58 475.6 28.3 238 1041-1283 1-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 3.1E-52 6.6E-57 422.7 22.0 221 383-613 2-229 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 9E-51 2E-55 412.0 23.2 218 1043-1274 3-230 (240)
106 KOG0927 Predicted transporter 100.0 5.4E-49 1.2E-53 444.1 30.9 198 1042-1264 389-591 (614)
107 COG1135 AbcC ABC-type metal io 100.0 1.5E-49 3.3E-54 423.5 21.3 221 384-615 2-237 (339)
108 COG1135 AbcC ABC-type metal io 100.0 4.6E-49 1E-53 419.9 22.7 222 1043-1275 2-237 (339)
109 COG1125 OpuBA ABC-type proline 100.0 3.1E-49 6.7E-54 407.7 19.9 219 384-616 2-232 (309)
110 PRK14257 phosphate ABC transpo 100.0 1.3E-48 2.7E-53 449.3 26.4 228 1038-1273 76-317 (329)
111 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.5E-48 7.5E-53 434.3 28.5 236 382-621 1-236 (275)
112 COG1117 PstB ABC-type phosphat 100.0 4.9E-49 1.1E-53 396.6 18.6 221 1042-1272 7-240 (253)
113 COG1117 PstB ABC-type phosphat 100.0 1.8E-48 3.8E-53 392.6 19.7 221 382-612 6-240 (253)
114 COG1125 OpuBA ABC-type proline 100.0 1E-47 2.3E-52 396.4 19.0 221 1043-1277 2-233 (309)
115 cd03252 ABCC_Hemolysin The ABC 100.0 2.3E-46 4.9E-51 415.9 28.0 235 1043-1280 1-235 (237)
116 cd03288 ABCC_SUR2 The SUR doma 100.0 3.1E-46 6.7E-51 418.9 29.0 241 1039-1282 16-256 (257)
117 PRK14257 phosphate ABC transpo 100.0 5.4E-46 1.2E-50 427.5 27.7 227 379-613 76-317 (329)
118 COG1127 Ttg2A ABC-type transpo 100.0 3E-46 6.5E-51 385.2 21.7 224 382-618 7-244 (263)
119 COG3839 MalK ABC-type sugar tr 100.0 7E-46 1.5E-50 414.5 23.5 218 383-616 3-230 (338)
120 KOG0062 ATPase component of AB 100.0 5.6E-45 1.2E-49 409.5 28.9 211 1041-1283 361-575 (582)
121 COG1124 DppF ABC-type dipeptid 100.0 2.1E-45 4.5E-50 381.7 22.7 228 1042-1280 3-242 (252)
122 cd03252 ABCC_Hemolysin The ABC 100.0 6.5E-45 1.4E-49 404.3 28.1 234 384-619 1-234 (237)
123 COG4615 PvdE ABC-type sideroph 100.0 3.1E-42 6.8E-47 373.6 47.8 471 109-601 54-529 (546)
124 cd03251 ABCC_MsbA MsbA is an e 100.0 6.5E-45 1.4E-49 403.7 26.7 233 1043-1278 1-233 (234)
125 COG1120 FepC ABC-type cobalami 100.0 1.2E-45 2.5E-50 397.5 19.9 214 383-610 2-229 (258)
126 cd03244 ABCC_MRP_domain2 Domai 100.0 8.2E-45 1.8E-49 399.2 26.9 221 1041-1264 1-221 (221)
127 cd03253 ABCC_ATM1_transporter 100.0 1.1E-44 2.3E-49 402.5 27.8 235 1043-1281 1-235 (236)
128 COG3842 PotA ABC-type spermidi 100.0 1.1E-45 2.4E-50 415.2 19.6 219 382-616 4-233 (352)
129 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.2E-44 2.6E-49 402.4 27.8 236 1043-1280 1-236 (238)
130 COG4615 PvdE ABC-type sideroph 100.0 4.2E-42 9.1E-47 372.6 45.9 476 764-1262 51-530 (546)
131 TIGR02314 ABC_MetN D-methionin 100.0 6.8E-45 1.5E-49 418.4 25.6 226 1043-1279 2-241 (343)
132 COG1120 FepC ABC-type cobalami 100.0 3.6E-45 7.9E-50 393.6 21.6 215 1042-1270 2-229 (258)
133 KOG0065 Pleiotropic drug resis 100.0 2.7E-44 5.8E-49 444.8 32.0 213 1044-1266 789-1018(1391)
134 cd03254 ABCC_Glucan_exporter_l 100.0 2.3E-44 4.9E-49 397.9 27.4 227 1041-1270 1-227 (229)
135 COG3840 ThiQ ABC-type thiamine 100.0 7.9E-45 1.7E-49 356.0 20.6 209 384-610 2-220 (231)
136 COG2884 FtsE Predicted ATPase 100.0 3E-45 6.6E-50 362.6 17.8 207 384-603 2-220 (223)
137 cd03288 ABCC_SUR2 The SUR doma 100.0 5.2E-44 1.1E-48 400.8 29.2 239 380-620 16-254 (257)
138 COG1116 TauB ABC-type nitrate/ 100.0 9.9E-45 2.1E-49 381.3 21.3 197 383-598 3-211 (248)
139 COG1124 DppF ABC-type dipeptid 100.0 1.4E-44 3E-49 375.5 22.2 227 383-619 3-241 (252)
140 COG3638 ABC-type phosphate/pho 100.0 8.6E-45 1.9E-49 373.4 18.9 217 383-609 3-237 (258)
141 COG3839 MalK ABC-type sugar tr 100.0 1.4E-44 3.1E-49 404.0 22.2 220 1042-1277 3-231 (338)
142 cd03254 ABCC_Glucan_exporter_l 100.0 8.2E-44 1.8E-48 393.5 27.8 227 382-610 1-227 (229)
143 COG1122 CbiO ABC-type cobalt t 100.0 2.4E-44 5.3E-49 388.8 22.3 216 1042-1270 3-229 (235)
144 cd03253 ABCC_ATM1_transporter 100.0 1.1E-43 2.4E-48 394.4 27.8 232 384-618 1-232 (236)
145 COG1118 CysA ABC-type sulfate/ 100.0 1.2E-44 2.6E-49 384.8 19.0 219 383-615 2-233 (345)
146 TIGR02314 ABC_MetN D-methionin 100.0 3.8E-44 8.2E-49 412.3 24.8 225 384-615 2-236 (343)
147 COG1136 SalX ABC-type antimicr 100.0 3.9E-44 8.5E-49 378.1 22.7 209 384-599 2-221 (226)
148 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-43 2.3E-48 393.9 27.4 226 384-610 1-226 (234)
149 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.3E-43 2.9E-48 394.0 27.7 227 384-610 1-227 (238)
150 PRK13631 cbiO cobalt transport 100.0 1.3E-43 2.9E-48 406.6 28.2 222 1042-1270 21-266 (320)
151 COG1122 CbiO ABC-type cobalt t 100.0 3.1E-44 6.8E-49 388.0 21.6 215 383-610 3-229 (235)
152 cd03245 ABCC_bacteriocin_expor 100.0 1.4E-43 3.1E-48 389.1 27.1 220 1041-1262 1-220 (220)
153 COG3840 ThiQ ABC-type thiamine 100.0 4.9E-44 1.1E-48 350.4 20.4 212 1043-1272 2-222 (231)
154 COG4178 ABC-type uncharacteriz 100.0 1.5E-40 3.4E-45 392.5 53.7 473 764-1254 89-587 (604)
155 COG1127 Ttg2A ABC-type transpo 100.0 6.7E-44 1.4E-48 367.8 21.7 227 1042-1281 8-247 (263)
156 COG2884 FtsE Predicted ATPase 100.0 3.7E-44 7.9E-49 355.0 18.3 209 1043-1264 2-221 (223)
157 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.4E-43 3.1E-48 378.8 23.8 210 383-610 4-228 (254)
158 cd03244 ABCC_MRP_domain2 Domai 100.0 3.3E-43 7.1E-48 386.5 27.3 220 382-603 1-220 (221)
159 COG3638 ABC-type phosphate/pho 100.0 8E-44 1.7E-48 366.3 20.1 223 1042-1280 3-245 (258)
160 cd03260 ABC_PstB_phosphate_tra 100.0 1.6E-43 3.5E-48 390.4 23.0 213 1043-1267 1-227 (227)
161 cd03261 ABC_Org_Solvent_Resist 100.0 2.4E-43 5.2E-48 391.0 24.3 219 1043-1276 1-232 (235)
162 cd03248 ABCC_TAP TAP, the Tran 100.0 3.4E-43 7.3E-48 387.6 25.1 219 1039-1258 8-226 (226)
163 COG3842 PotA ABC-type spermidi 100.0 8.1E-44 1.8E-48 400.0 20.4 222 1042-1279 5-236 (352)
164 COG1116 TauB ABC-type nitrate/ 100.0 1.8E-43 3.9E-48 371.8 21.1 198 1042-1258 3-211 (248)
165 cd03245 ABCC_bacteriocin_expor 100.0 9.5E-43 2.1E-47 382.5 27.4 220 382-602 1-220 (220)
166 PRK14269 phosphate ABC transpo 100.0 6.3E-43 1.4E-47 390.0 26.1 220 1043-1272 3-233 (246)
167 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.8E-43 8.2E-48 375.6 22.9 218 1042-1279 4-235 (254)
168 COG1136 SalX ABC-type antimicr 100.0 6.3E-43 1.4E-47 368.9 23.9 208 1043-1260 2-222 (226)
169 PRK13650 cbiO cobalt transport 100.0 4.8E-43 1E-47 397.0 24.7 218 1042-1270 4-230 (279)
170 PRK14250 phosphate ABC transpo 100.0 1.1E-42 2.4E-47 386.5 26.8 225 1042-1279 3-231 (241)
171 PRK11432 fbpC ferric transport 100.0 4.8E-43 1E-47 405.6 23.7 220 1042-1277 6-234 (351)
172 PRK13631 cbiO cobalt transport 100.0 8.8E-43 1.9E-47 399.8 25.7 222 382-610 20-266 (320)
173 PRK11153 metN DL-methionine tr 100.0 8.9E-43 1.9E-47 404.7 25.3 224 1043-1277 2-238 (343)
174 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.8E-42 3.9E-47 376.2 26.1 204 1040-1264 4-207 (207)
175 PRK11650 ugpC glycerol-3-phosp 100.0 8.1E-43 1.8E-47 405.0 24.8 221 1042-1277 3-232 (356)
176 PRK11650 ugpC glycerol-3-phosp 100.0 1.5E-42 3.3E-47 402.7 26.7 218 383-615 3-230 (356)
177 cd03248 ABCC_TAP TAP, the Tran 100.0 1.6E-42 3.5E-47 382.2 25.4 220 379-598 7-226 (226)
178 PRK14273 phosphate ABC transpo 100.0 1.5E-42 3.2E-47 389.2 25.1 226 1042-1277 7-246 (254)
179 PRK13637 cbiO cobalt transport 100.0 1.4E-42 3E-47 394.5 25.2 219 1043-1270 3-235 (287)
180 COG4178 ABC-type uncharacteriz 100.0 4.2E-39 9.1E-44 380.4 55.5 473 102-594 85-587 (604)
181 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-42 3.1E-47 387.6 24.7 223 1043-1275 2-238 (247)
182 cd03261 ABC_Org_Solvent_Resist 100.0 2.5E-42 5.3E-47 382.9 25.9 217 384-610 1-227 (235)
183 PRK14242 phosphate transporter 100.0 2E-42 4.3E-47 388.1 24.5 222 1042-1273 6-241 (253)
184 TIGR01186 proV glycine betaine 100.0 9.1E-43 2E-47 402.7 22.1 209 1058-1277 6-227 (363)
185 TIGR03265 PhnT2 putative 2-ami 100.0 1.7E-42 3.6E-47 401.9 24.3 219 1042-1276 4-231 (353)
186 PRK13647 cbiO cobalt transport 100.0 2.1E-42 4.7E-47 390.6 24.4 214 1042-1268 4-226 (274)
187 PRK11432 fbpC ferric transport 100.0 2.3E-42 4.9E-47 400.0 24.9 217 383-615 6-232 (351)
188 PRK13646 cbiO cobalt transport 100.0 2.5E-42 5.4E-47 392.6 24.8 221 1043-1270 3-236 (286)
189 PRK10744 pstB phosphate transp 100.0 4.2E-42 9.2E-47 386.4 26.4 224 1040-1273 11-248 (260)
190 TIGR03265 PhnT2 putative 2-ami 100.0 2.2E-42 4.7E-47 401.0 24.6 221 383-615 4-230 (353)
191 PRK13643 cbiO cobalt transport 100.0 2E-42 4.3E-47 393.4 23.8 218 1043-1270 2-234 (288)
192 PRK14235 phosphate transporter 100.0 3.5E-42 7.6E-47 388.0 25.3 224 1040-1273 17-255 (267)
193 cd03296 ABC_CysA_sulfate_impor 100.0 2.9E-42 6.3E-47 383.1 23.7 214 1043-1272 3-229 (239)
194 cd03260 ABC_PstB_phosphate_tra 100.0 2.2E-42 4.8E-47 381.3 22.4 210 384-607 1-227 (227)
195 cd03256 ABC_PhnC_transporter A 100.0 3.7E-42 7.9E-47 383.6 24.2 214 1043-1269 1-234 (241)
196 cd03263 ABC_subfamily_A The AB 100.0 3.5E-42 7.5E-47 378.1 23.5 212 1043-1267 1-219 (220)
197 PRK10851 sulfate/thiosulfate t 100.0 4E-42 8.6E-47 398.8 25.2 218 1043-1276 3-233 (353)
198 PRK14267 phosphate ABC transpo 100.0 3.4E-42 7.3E-47 386.3 23.8 227 1042-1278 4-246 (253)
199 cd03219 ABC_Mj1267_LivG_branch 100.0 2.8E-42 6.1E-47 383.1 22.9 218 1043-1270 1-233 (236)
200 PRK13635 cbiO cobalt transport 100.0 4.2E-42 9.1E-47 389.0 24.6 217 1042-1270 5-230 (279)
201 PRK09536 btuD corrinoid ABC tr 100.0 5.2E-42 1.1E-46 401.1 25.9 222 1042-1279 3-236 (402)
202 PRK11153 metN DL-methionine tr 100.0 4.5E-42 9.8E-47 398.8 25.2 225 384-615 2-236 (343)
203 PRK14269 phosphate ABC transpo 100.0 5.9E-42 1.3E-46 382.2 25.1 220 383-612 2-233 (246)
204 TIGR01186 proV glycine betaine 100.0 2.3E-42 5E-47 399.3 22.4 212 398-616 5-226 (363)
205 PRK15079 oligopeptide ABC tran 100.0 5.9E-42 1.3E-46 394.4 25.7 227 1042-1278 8-260 (331)
206 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.4E-41 5.2E-46 380.5 29.8 221 1038-1279 35-256 (282)
207 PRK14247 phosphate ABC transpo 100.0 5.3E-42 1.1E-46 384.0 24.3 227 1042-1278 3-243 (250)
208 PRK13634 cbiO cobalt transport 100.0 5E-42 1.1E-46 390.6 24.5 218 1043-1270 3-236 (290)
209 TIGR00960 3a0501s02 Type II (G 100.0 2.8E-42 6E-47 377.5 21.5 204 1043-1258 2-216 (216)
210 PRK13650 cbiO cobalt transport 100.0 8.1E-42 1.8E-46 387.0 25.9 217 383-610 4-230 (279)
211 PRK09452 potA putrescine/sperm 100.0 4.9E-42 1.1E-46 399.5 24.7 219 1042-1276 14-241 (375)
212 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.6E-42 7.7E-47 388.1 22.8 220 1044-1277 26-258 (269)
213 TIGR02315 ABC_phnC phosphonate 100.0 5.6E-42 1.2E-46 382.4 24.0 213 1043-1268 2-234 (243)
214 cd03219 ABC_Mj1267_LivG_branch 100.0 4.5E-42 9.7E-47 381.4 22.9 222 384-610 1-233 (236)
215 PRK09452 potA putrescine/sperm 100.0 7.9E-42 1.7E-46 397.8 25.9 218 382-615 13-240 (375)
216 PRK13642 cbiO cobalt transport 100.0 7.6E-42 1.6E-46 387.1 25.1 218 1042-1270 4-230 (277)
217 cd03258 ABC_MetN_methionine_tr 100.0 6.1E-42 1.3E-46 379.4 23.7 217 1043-1270 2-231 (233)
218 PRK13636 cbiO cobalt transport 100.0 6.9E-42 1.5E-46 388.4 24.6 216 1042-1270 5-232 (283)
219 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.8E-42 1.3E-46 381.5 23.6 222 1043-1275 1-231 (242)
220 TIGR03258 PhnT 2-aminoethylpho 100.0 6.3E-42 1.4E-46 397.4 24.6 220 1041-1276 4-235 (362)
221 cd03224 ABC_TM1139_LivF_branch 100.0 6.7E-42 1.5E-46 376.5 23.3 217 1043-1269 1-221 (222)
222 PRK14250 phosphate ABC transpo 100.0 1.3E-41 2.9E-46 377.9 25.9 221 383-617 3-229 (241)
223 PRK14268 phosphate ABC transpo 100.0 9.3E-42 2E-46 383.1 24.7 224 1042-1275 12-248 (258)
224 cd03259 ABC_Carb_Solutes_like 100.0 4.3E-42 9.3E-47 375.2 21.2 204 1043-1262 1-213 (213)
225 PRK14248 phosphate ABC transpo 100.0 1.1E-41 2.4E-46 384.8 25.2 222 1042-1273 21-256 (268)
226 PRK14274 phosphate ABC transpo 100.0 1E-41 2.2E-46 383.4 24.7 225 1042-1276 12-250 (259)
227 PRK13637 cbiO cobalt transport 100.0 1E-41 2.2E-46 387.4 24.9 220 384-610 3-235 (287)
228 PRK13643 cbiO cobalt transport 100.0 8.8E-42 1.9E-46 388.2 24.3 220 384-610 2-234 (288)
229 PRK13651 cobalt transporter AT 100.0 9.5E-42 2.1E-46 389.1 24.4 218 1043-1270 3-255 (305)
230 PRK11022 dppD dipeptide transp 100.0 9.9E-42 2.1E-46 392.6 24.8 229 1043-1279 4-253 (326)
231 PRK14251 phosphate ABC transpo 100.0 9E-42 1.9E-46 382.4 23.7 226 1042-1277 4-243 (251)
232 PRK10851 sulfate/thiosulfate t 100.0 1.1E-41 2.4E-46 395.0 25.3 221 383-615 2-232 (353)
233 PRK14244 phosphate ABC transpo 100.0 6.7E-42 1.5E-46 383.2 22.6 224 1043-1276 6-244 (251)
234 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.7E-41 3.6E-46 376.3 25.6 213 1043-1270 2-222 (236)
235 PRK14237 phosphate transporter 100.0 1.4E-41 3.1E-46 383.0 25.4 222 1041-1272 19-254 (267)
236 TIGR03005 ectoine_ehuA ectoine 100.0 1.4E-41 2.9E-46 380.9 25.0 219 1043-1275 1-242 (252)
237 PRK14240 phosphate transporter 100.0 1.5E-41 3.3E-46 380.2 25.4 225 1041-1275 2-240 (250)
238 PRK14259 phosphate ABC transpo 100.0 1.4E-41 3.1E-46 383.2 25.2 225 1041-1275 12-259 (269)
239 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-41 2.8E-46 368.6 23.9 200 1043-1257 1-204 (204)
240 PRK11629 lolD lipoprotein tran 100.0 1.2E-41 2.5E-46 376.8 23.9 211 1042-1263 5-228 (233)
241 PRK11000 maltose/maltodextrin 100.0 1E-41 2.3E-46 398.7 24.5 219 1042-1276 3-230 (369)
242 PRK14236 phosphate transporter 100.0 2.1E-41 4.6E-46 382.8 26.2 224 1040-1273 23-260 (272)
243 PRK11308 dppF dipeptide transp 100.0 2.1E-41 4.6E-46 389.6 26.6 228 1042-1279 5-254 (327)
244 PRK13632 cbiO cobalt transport 100.0 1.2E-41 2.7E-46 384.5 24.2 217 1042-1270 7-232 (271)
245 PRK14273 phosphate ABC transpo 100.0 2.3E-41 5E-46 379.5 26.2 225 382-616 6-245 (254)
246 TIGR00972 3a0107s01c2 phosphat 100.0 2.4E-41 5.2E-46 377.7 26.3 220 384-613 2-236 (247)
247 PRK14239 phosphate transporter 100.0 1.6E-41 3.5E-46 380.8 24.9 222 1042-1273 5-240 (252)
248 TIGR03258 PhnT 2-aminoethylpho 100.0 1.1E-41 2.4E-46 395.3 24.4 222 382-615 4-234 (362)
249 PRK13646 cbiO cobalt transport 100.0 1.7E-41 3.7E-46 385.8 25.4 220 384-610 3-236 (286)
250 cd03296 ABC_CysA_sulfate_impor 100.0 1.3E-41 2.8E-46 378.0 23.6 216 384-611 3-228 (239)
251 PRK13647 cbiO cobalt transport 100.0 1.7E-41 3.7E-46 383.3 25.0 212 383-607 4-225 (274)
252 PRK14262 phosphate ABC transpo 100.0 1.5E-41 3.3E-46 380.2 24.4 228 1042-1279 3-244 (250)
253 PRK14245 phosphate ABC transpo 100.0 1.4E-41 3E-46 380.4 23.9 224 1042-1275 3-240 (250)
254 PRK13633 cobalt transporter AT 100.0 1.4E-41 3.1E-46 385.5 24.2 218 1042-1270 4-234 (280)
255 cd03264 ABC_drug_resistance_li 100.0 1.1E-41 2.4E-46 371.3 22.3 204 1043-1262 1-211 (211)
256 PRK14256 phosphate ABC transpo 100.0 2.4E-41 5.2E-46 378.9 25.7 224 1041-1274 3-241 (252)
257 COG1118 CysA ABC-type sulfate/ 100.0 5.9E-42 1.3E-46 364.3 19.4 218 1042-1275 2-233 (345)
258 cd03266 ABC_NatA_sodium_export 100.0 1.4E-41 3E-46 372.7 23.1 208 1043-1262 2-218 (218)
259 PRK13652 cbiO cobalt transport 100.0 1.9E-41 4E-46 384.0 24.7 215 1043-1270 4-228 (277)
260 PRK11831 putative ABC transpor 100.0 1.8E-41 3.9E-46 382.7 24.6 225 1042-1280 7-244 (269)
261 PRK13634 cbiO cobalt transport 100.0 2.7E-41 5.9E-46 384.5 26.1 220 384-610 3-236 (290)
262 PRK10619 histidine/lysine/argi 100.0 2.4E-41 5.1E-46 379.9 25.2 219 1041-1272 4-244 (257)
263 cd03265 ABC_DrrA DrrA is the A 100.0 1.6E-41 3.6E-46 372.4 23.2 210 1043-1267 1-219 (220)
264 PRK13640 cbiO cobalt transport 100.0 2.9E-41 6.2E-46 383.1 25.9 217 1042-1270 5-233 (282)
265 PRK14242 phosphate transporter 100.0 2.5E-41 5.3E-46 379.3 24.9 220 383-612 6-240 (253)
266 PRK10744 pstB phosphate transp 100.0 3.4E-41 7.5E-46 379.0 26.1 225 381-615 11-250 (260)
267 PRK13537 nodulation ABC transp 100.0 1.7E-41 3.7E-46 388.1 24.0 214 1042-1270 7-228 (306)
268 PRK15079 oligopeptide ABC tran 100.0 3.3E-41 7.1E-46 388.2 26.4 229 383-618 8-260 (331)
269 PRK10575 iron-hydroxamate tran 100.0 1.9E-41 4E-46 382.0 23.7 222 1042-1279 11-245 (265)
270 PRK14249 phosphate ABC transpo 100.0 3.8E-41 8.2E-46 377.1 26.0 220 1042-1271 4-237 (251)
271 PRK09536 btuD corrinoid ABC tr 100.0 2.1E-41 4.5E-46 396.0 24.7 214 383-610 3-229 (402)
272 PRK14243 phosphate transporter 100.0 3.6E-41 7.8E-46 379.1 25.7 223 1042-1274 10-253 (264)
273 cd03218 ABC_YhbG The ABC trans 100.0 2.3E-41 5E-46 374.7 23.7 217 1043-1269 1-222 (232)
274 TIGR02769 nickel_nikE nickel i 100.0 3.7E-41 8.1E-46 379.5 25.7 227 1043-1279 3-250 (265)
275 cd03224 ABC_TM1139_LivF_branch 100.0 1.9E-41 4.2E-46 372.9 22.7 217 384-609 1-221 (222)
276 cd03258 ABC_MetN_methionine_tr 100.0 2.1E-41 4.6E-46 375.1 23.0 220 384-610 2-231 (233)
277 cd03226 ABC_cobalt_CbiO_domain 100.0 1.6E-41 3.5E-46 368.1 21.6 200 1044-1259 1-205 (205)
278 cd03256 ABC_PhnC_transporter A 100.0 2.2E-41 4.7E-46 377.3 23.2 221 384-608 1-233 (241)
279 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.6E-41 5.7E-46 376.2 23.8 218 384-610 1-226 (242)
280 PRK14238 phosphate transporter 100.0 4.9E-41 1.1E-45 379.3 26.3 222 1042-1273 24-259 (271)
281 PRK11607 potG putrescine trans 100.0 2.2E-41 4.7E-46 395.0 23.8 221 1041-1277 18-247 (377)
282 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.7E-41 1.5E-45 363.9 26.0 203 382-604 5-207 (207)
283 PRK10070 glycine betaine trans 100.0 3.2E-41 6.9E-46 394.2 25.2 207 1059-1276 42-261 (400)
284 COG0410 LivF ABC-type branched 100.0 3.2E-41 6.9E-46 348.3 22.1 220 383-610 3-227 (237)
285 PRK14261 phosphate ABC transpo 100.0 4.4E-41 9.6E-46 377.0 25.3 229 1042-1280 6-248 (253)
286 cd03247 ABCC_cytochrome_bd The 100.0 2.5E-41 5.4E-46 357.7 22.0 178 1043-1262 1-178 (178)
287 PRK09473 oppD oligopeptide tra 100.0 3E-41 6.4E-46 388.9 24.5 230 1042-1279 12-261 (330)
288 PRK13651 cobalt transporter AT 100.0 2.7E-41 5.9E-46 385.3 23.9 220 384-610 3-255 (305)
289 PRK14260 phosphate ABC transpo 100.0 3.4E-41 7.4E-46 378.8 24.3 222 1042-1273 7-247 (259)
290 TIGR03411 urea_trans_UrtD urea 100.0 4.4E-41 9.5E-46 374.8 24.9 213 1043-1269 3-231 (242)
291 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.4E-41 3.1E-46 372.6 20.7 205 1043-1258 1-218 (218)
292 cd03263 ABC_subfamily_A The AB 100.0 1.8E-41 3.8E-46 372.4 21.4 215 384-607 1-219 (220)
293 PRK09493 glnQ glutamine ABC tr 100.0 3.5E-41 7.6E-46 374.9 23.8 214 1043-1270 2-226 (240)
294 PRK11264 putative amino-acid A 100.0 4.5E-41 9.8E-46 376.6 24.7 216 1043-1272 4-236 (250)
295 PRK14270 phosphate ABC transpo 100.0 5.3E-41 1.1E-45 375.9 25.2 221 1042-1272 4-238 (251)
296 cd03268 ABC_BcrA_bacitracin_re 100.0 2.8E-41 6.1E-46 367.3 22.3 204 1043-1262 1-208 (208)
297 TIGR00960 3a0501s02 Type II (G 100.0 1.7E-41 3.7E-46 371.3 20.7 203 384-598 2-216 (216)
298 PRK14266 phosphate ABC transpo 100.0 6.1E-41 1.3E-45 375.4 25.6 225 1042-1276 3-241 (250)
299 PRK13648 cbiO cobalt transport 100.0 4.3E-41 9.4E-46 379.9 24.6 217 1042-1270 7-232 (269)
300 COG4175 ProV ABC-type proline/ 100.0 1.2E-41 2.5E-46 361.5 18.6 224 383-617 4-262 (386)
301 PRK13644 cbiO cobalt transport 100.0 4.5E-41 9.8E-46 379.9 24.6 215 1043-1270 2-225 (274)
302 PRK14235 phosphate transporter 100.0 5.5E-41 1.2E-45 378.3 25.2 222 381-612 17-254 (267)
303 PRK11000 maltose/maltodextrin 100.0 3.6E-41 7.8E-46 394.2 24.4 221 383-615 3-229 (369)
304 PRK14271 phosphate ABC transpo 100.0 9.1E-41 2E-45 377.5 26.8 222 1042-1273 21-255 (276)
305 TIGR03410 urea_trans_UrtE urea 100.0 3E-41 6.5E-46 373.1 22.4 213 1043-1268 1-220 (230)
306 TIGR02211 LolD_lipo_ex lipopro 100.0 3.5E-41 7.5E-46 370.4 22.8 206 1043-1259 2-220 (221)
307 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.8E-41 6.1E-46 380.8 22.5 222 385-616 26-257 (269)
308 cd03301 ABC_MalK_N The N-termi 100.0 2.6E-41 5.7E-46 369.1 21.5 204 1043-1262 1-213 (213)
309 PRK11231 fecE iron-dicitrate t 100.0 4.9E-41 1.1E-45 376.9 24.3 222 1043-1280 3-236 (255)
310 PRK13635 cbiO cobalt transport 100.0 5.6E-41 1.2E-45 379.8 24.8 216 383-610 5-230 (279)
311 PRK11607 potG putrescine trans 100.0 4.6E-41 1E-45 392.3 24.7 223 382-616 18-246 (377)
312 PRK11124 artP arginine transpo 100.0 5.3E-41 1.2E-45 373.9 24.2 214 1043-1270 3-231 (242)
313 TIGR02315 ABC_phnC phosphonate 100.0 4.7E-41 1E-45 375.0 23.7 220 384-607 2-233 (243)
314 cd03259 ABC_Carb_Solutes_like 100.0 2.4E-41 5.3E-46 369.2 20.9 207 384-602 1-213 (213)
315 PRK13649 cbiO cobalt transport 100.0 5.2E-41 1.1E-45 381.8 24.4 218 1043-1270 3-235 (280)
316 PRK14254 phosphate ABC transpo 100.0 9.2E-41 2E-45 378.9 26.2 222 1041-1272 38-272 (285)
317 PRK14275 phosphate ABC transpo 100.0 6.6E-41 1.4E-45 380.6 25.1 226 1042-1277 39-278 (286)
318 PRK13645 cbiO cobalt transport 100.0 6.8E-41 1.5E-45 382.1 25.1 221 1040-1270 4-241 (289)
319 PRK13641 cbiO cobalt transport 100.0 7.7E-41 1.7E-45 380.6 25.5 218 1043-1270 3-235 (287)
320 PRK11614 livF leucine/isoleuci 100.0 7.3E-41 1.6E-45 371.6 24.6 219 1042-1270 5-227 (237)
321 cd03218 ABC_YhbG The ABC trans 100.0 4.2E-41 9.1E-46 372.6 22.7 216 384-609 1-222 (232)
322 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.8E-41 6.1E-46 370.5 21.0 207 1043-1265 1-219 (220)
323 PRK14253 phosphate ABC transpo 100.0 8.1E-41 1.8E-45 374.1 25.1 222 1042-1273 3-237 (249)
324 TIGR03415 ABC_choXWV_ATP choli 100.0 4.7E-41 1E-45 389.8 24.0 219 1047-1279 29-264 (382)
325 PRK14259 phosphate ABC transpo 100.0 1E-40 2.3E-45 376.2 26.2 224 382-615 12-259 (269)
326 PRK13537 nodulation ABC transp 100.0 3.8E-41 8.2E-46 385.2 22.9 218 382-610 6-228 (306)
327 PRK14267 phosphate ABC transpo 100.0 6E-41 1.3E-45 376.1 24.0 219 383-611 4-239 (253)
328 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6.8E-41 1.5E-45 371.4 24.1 216 384-610 2-222 (236)
329 PRK14263 phosphate ABC transpo 100.0 9.2E-41 2E-45 374.6 25.4 226 1042-1277 8-253 (261)
330 cd03300 ABC_PotA_N PotA is an 100.0 3.8E-41 8.2E-46 372.2 21.9 213 1043-1271 1-222 (232)
331 PRK14241 phosphate transporter 100.0 6.2E-41 1.3E-45 376.7 23.9 221 1042-1272 4-245 (258)
332 TIGR02673 FtsE cell division A 100.0 3.6E-41 7.8E-46 368.3 21.2 202 1043-1257 2-214 (214)
333 cd03225 ABC_cobalt_CbiO_domain 100.0 3.2E-41 7E-46 367.9 20.7 202 1044-1257 1-211 (211)
334 PRK13548 hmuV hemin importer A 100.0 1.4E-40 3.1E-45 373.0 26.4 214 1043-1270 3-231 (258)
335 PRK11831 putative ABC transpor 100.0 5.8E-41 1.3E-45 378.6 23.3 226 383-618 7-242 (269)
336 PRK14247 phosphate ABC transpo 100.0 1.1E-40 2.3E-45 373.4 25.3 220 383-612 3-237 (250)
337 PRK13636 cbiO cobalt transport 100.0 6.1E-41 1.3E-45 380.7 23.6 219 383-610 5-232 (283)
338 PRK14258 phosphate ABC transpo 100.0 1E-40 2.2E-45 375.2 25.0 223 1041-1273 6-249 (261)
339 PRK13638 cbiO cobalt transport 100.0 8.9E-41 1.9E-45 377.8 24.7 214 1043-1270 2-226 (271)
340 PRK11247 ssuB aliphatic sulfon 100.0 8.6E-41 1.9E-45 372.5 24.2 204 1042-1265 12-219 (257)
341 PRK14252 phosphate ABC transpo 100.0 1.4E-40 2.9E-45 375.3 25.8 226 1040-1275 14-255 (265)
342 PRK14274 phosphate ABC transpo 100.0 1.4E-40 3E-45 374.1 25.7 223 383-615 12-249 (259)
343 TIGR03415 ABC_choXWV_ATP choli 100.0 6.4E-41 1.4E-45 388.7 23.6 212 399-617 37-262 (382)
344 PRK10895 lipopolysaccharide AB 100.0 6.6E-41 1.4E-45 373.0 22.8 218 1043-1270 4-227 (241)
345 TIGR01288 nodI ATP-binding ABC 100.0 8.1E-41 1.8E-45 383.4 24.1 214 1042-1270 4-225 (303)
346 PRK10070 glycine betaine trans 100.0 8.3E-41 1.8E-45 390.7 24.5 227 383-616 4-261 (400)
347 PRK11264 putative amino-acid A 100.0 2.3E-40 4.9E-45 371.0 27.0 220 383-612 3-236 (250)
348 cd03291 ABCC_CFTR1 The CFTR su 100.0 5.4E-40 1.2E-44 369.6 30.1 214 378-610 34-248 (282)
349 PRK11629 lolD lipoprotein tran 100.0 1.6E-40 3.4E-45 367.7 25.4 214 383-603 5-228 (233)
350 PRK13642 cbiO cobalt transport 100.0 1.4E-40 3E-45 376.9 25.4 217 383-610 4-230 (277)
351 cd03226 ABC_cobalt_CbiO_domain 100.0 4.3E-41 9.3E-46 364.8 20.4 199 385-599 1-205 (205)
352 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.5E-41 7.5E-46 369.6 19.9 208 384-598 1-218 (218)
353 PRK14240 phosphate transporter 100.0 1.7E-40 3.8E-45 371.7 25.9 223 382-614 2-239 (250)
354 PRK15093 antimicrobial peptide 100.0 9.8E-41 2.1E-45 385.9 24.6 229 1043-1279 4-258 (330)
355 PRK11308 dppF dipeptide transp 100.0 1E-40 2.2E-45 383.9 24.6 230 383-619 5-254 (327)
356 PRK10247 putative ABC transpor 100.0 7.7E-41 1.7E-45 367.7 22.5 211 1042-1265 7-223 (225)
357 PRK10253 iron-enterobactin tra 100.0 1.1E-40 2.3E-45 375.8 24.1 214 1042-1269 7-233 (265)
358 cd03290 ABCC_SUR1_N The SUR do 100.0 1.2E-40 2.7E-45 364.9 24.0 210 1044-1257 2-218 (218)
359 PRK14246 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 372.0 25.1 228 1042-1279 10-251 (257)
360 PRK14268 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 374.2 24.4 223 383-615 12-248 (258)
361 cd03292 ABC_FtsE_transporter F 100.0 6.8E-41 1.5E-45 366.3 21.7 203 1043-1258 1-214 (214)
362 PRK14272 phosphate ABC transpo 100.0 1.4E-40 3E-45 373.2 24.6 225 1043-1277 5-244 (252)
363 PRK15112 antimicrobial peptide 100.0 1.8E-40 3.9E-45 374.1 25.7 230 1042-1282 4-253 (267)
364 TIGR03873 F420-0_ABC_ATP propo 100.0 1.2E-40 2.6E-45 373.9 24.1 213 1043-1269 2-226 (256)
365 TIGR00968 3a0106s01 sulfate AB 100.0 1.4E-40 3E-45 368.8 24.3 212 1043-1270 1-221 (237)
366 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-40 2.3E-45 371.0 23.3 217 384-610 2-226 (240)
367 TIGR02769 nickel_nikE nickel i 100.0 1.2E-40 2.6E-45 375.4 23.9 220 384-610 3-241 (265)
368 PRK14255 phosphate ABC transpo 100.0 1.4E-40 2.9E-45 373.0 24.2 224 1042-1275 5-242 (252)
369 cd03264 ABC_drug_resistance_li 100.0 8.7E-41 1.9E-45 364.3 22.0 203 384-602 1-211 (211)
370 cd03250 ABCC_MRP_domain1 Domai 100.0 1.7E-40 3.7E-45 359.8 24.0 200 384-597 1-204 (204)
371 TIGR03005 ectoine_ehuA ectoine 100.0 1.2E-40 2.5E-45 373.4 23.4 222 384-615 1-242 (252)
372 TIGR03522 GldA_ABC_ATP gliding 100.0 1.4E-40 3E-45 380.8 24.4 213 1043-1270 3-222 (301)
373 cd03265 ABC_DrrA DrrA is the A 100.0 1.3E-40 2.7E-45 365.3 23.1 213 384-607 1-219 (220)
374 cd03235 ABC_Metallic_Cations A 100.0 5.6E-41 1.2E-45 366.4 20.1 199 1044-1262 1-213 (213)
375 PRK10584 putative ABC transpor 100.0 1.6E-40 3.4E-45 366.8 24.0 209 1042-1261 6-227 (228)
376 COG4555 NatA ABC-type Na+ tran 100.0 2.2E-41 4.8E-46 337.8 15.3 219 384-610 2-223 (245)
377 cd03266 ABC_NatA_sodium_export 100.0 8.5E-41 1.8E-45 366.5 21.6 211 384-602 2-218 (218)
378 PRK13639 cbiO cobalt transport 100.0 1.6E-40 3.5E-45 375.9 24.5 215 1043-1270 2-227 (275)
379 PRK14265 phosphate ABC transpo 100.0 2.4E-40 5.1E-45 374.0 25.8 222 1042-1273 20-262 (274)
380 PRK14236 phosphate transporter 100.0 2.2E-40 4.9E-45 374.4 25.6 221 381-611 23-258 (272)
381 PRK13652 cbiO cobalt transport 100.0 2.4E-40 5.2E-45 374.9 25.8 219 383-610 3-228 (277)
382 PRK11614 livF leucine/isoleuci 100.0 1.5E-40 3.3E-45 369.1 23.7 219 383-610 5-227 (237)
383 PRK13536 nodulation factor exp 100.0 1.3E-40 2.9E-45 384.0 24.1 214 1042-1270 41-262 (340)
384 PRK14251 phosphate ABC transpo 100.0 1.4E-40 2.9E-45 372.8 23.5 224 383-616 4-242 (251)
385 PRK09473 oppD oligopeptide tra 100.0 1.1E-40 2.4E-45 384.2 23.3 231 383-619 12-261 (330)
386 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.5E-40 3.3E-45 362.4 23.2 202 1043-1262 1-211 (211)
387 PRK11300 livG leucine/isoleuci 100.0 1.7E-40 3.6E-45 373.2 24.1 221 1042-1270 5-244 (255)
388 PRK14264 phosphate ABC transpo 100.0 2.5E-40 5.3E-45 379.1 25.9 221 1041-1271 44-291 (305)
389 PRK13649 cbiO cobalt transport 100.0 2.3E-40 5E-45 376.5 25.5 220 384-610 3-235 (280)
390 PRK11022 dppD dipeptide transp 100.0 1.3E-40 2.8E-45 383.4 23.6 230 383-619 3-253 (326)
391 PRK14245 phosphate ABC transpo 100.0 1.4E-40 3.1E-45 372.2 23.4 223 383-613 3-238 (250)
392 PRK14248 phosphate ABC transpo 100.0 2.8E-40 6.1E-45 373.3 25.8 221 383-613 21-256 (268)
393 PRK14256 phosphate ABC transpo 100.0 2.6E-40 5.7E-45 370.5 25.4 224 382-615 3-242 (252)
394 PRK14237 phosphate transporter 100.0 2.6E-40 5.6E-45 372.9 25.5 222 381-612 18-254 (267)
395 PRK13632 cbiO cobalt transport 100.0 2.6E-40 5.7E-45 373.7 25.5 220 383-610 7-232 (271)
396 PRK10771 thiQ thiamine transpo 100.0 2.5E-40 5.5E-45 365.9 24.9 210 1043-1270 2-220 (232)
397 PRK14243 phosphate transporter 100.0 3.2E-40 7E-45 371.4 26.1 222 383-614 10-253 (264)
398 PRK10908 cell division protein 100.0 1.5E-40 3.2E-45 365.4 22.8 205 1043-1260 2-217 (222)
399 PRK13644 cbiO cobalt transport 100.0 1.8E-40 4E-45 374.9 24.2 218 384-610 2-225 (274)
400 TIGR03411 urea_trans_UrtD urea 100.0 2.3E-40 4.9E-45 369.1 24.6 221 384-609 3-231 (242)
401 cd03268 ABC_BcrA_bacitracin_re 100.0 1.3E-40 2.9E-45 362.0 22.0 203 384-602 1-208 (208)
402 PRK14239 phosphate transporter 100.0 2.3E-40 5E-45 371.4 24.6 221 383-613 5-240 (252)
403 cd03246 ABCC_Protease_Secretio 100.0 1.4E-40 3.1E-45 350.0 21.5 172 1043-1258 1-173 (173)
404 PRK10619 histidine/lysine/argi 100.0 1.9E-40 4.2E-45 372.5 23.8 220 382-611 4-243 (257)
405 PRK13641 cbiO cobalt transport 100.0 2E-40 4.4E-45 377.2 24.3 221 383-610 2-235 (287)
406 PRK14249 phosphate ABC transpo 100.0 3.3E-40 7.2E-45 369.4 25.7 221 382-612 3-238 (251)
407 PRK14238 phosphate transporter 100.0 2.8E-40 6.1E-45 373.1 25.1 223 383-613 24-259 (271)
408 PRK10575 iron-hydroxamate tran 100.0 2E-40 4.3E-45 373.6 23.6 213 383-609 11-237 (265)
409 PRK13645 cbiO cobalt transport 100.0 2E-40 4.4E-45 378.2 24.0 222 382-610 5-241 (289)
410 PRK11701 phnK phosphonate C-P 100.0 4.2E-40 9.2E-45 370.0 26.1 228 1042-1279 6-251 (258)
411 cd03257 ABC_NikE_OppD_transpor 100.0 2.5E-40 5.4E-45 365.7 23.7 213 1043-1262 2-228 (228)
412 PRK10895 lipopolysaccharide AB 100.0 2.3E-40 5.1E-45 368.6 23.5 218 383-610 3-227 (241)
413 PRK13633 cobalt transporter AT 100.0 2.6E-40 5.6E-45 375.3 24.2 217 383-610 4-234 (280)
414 PRK13640 cbiO cobalt transport 100.0 3.8E-40 8.2E-45 373.9 25.4 221 382-610 4-233 (282)
415 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.2E-40 2.6E-45 365.5 20.6 209 384-604 1-218 (220)
416 TIGR03410 urea_trans_UrtE urea 100.0 1.9E-40 4.2E-45 366.7 22.3 214 384-607 1-219 (230)
417 PRK13536 nodulation factor exp 100.0 1.9E-40 4E-45 382.9 23.1 217 383-610 41-262 (340)
418 cd03269 ABC_putative_ATPase Th 100.0 1.6E-40 3.5E-45 362.0 21.3 202 1043-1262 1-210 (210)
419 PRK13547 hmuV hemin importer A 100.0 3.9E-40 8.5E-45 370.4 25.0 213 1043-1269 2-244 (272)
420 PRK14261 phosphate ABC transpo 100.0 3.4E-40 7.3E-45 369.8 24.4 225 383-617 6-245 (253)
421 PRK14270 phosphate ABC transpo 100.0 4E-40 8.7E-45 368.8 24.7 220 383-612 4-238 (251)
422 TIGR02211 LolD_lipo_ex lipopro 100.0 2.1E-40 4.5E-45 364.2 21.9 209 384-599 2-220 (221)
423 TIGR01288 nodI ATP-binding ABC 100.0 2.1E-40 4.6E-45 380.0 22.9 217 383-610 4-225 (303)
424 PRK11247 ssuB aliphatic sulfon 100.0 3.6E-40 7.9E-45 367.5 24.0 205 382-605 11-219 (257)
425 cd03299 ABC_ModC_like Archeal 100.0 4.1E-40 8.9E-45 364.5 24.1 212 1043-1271 1-221 (235)
426 TIGR03522 GldA_ABC_ATP gliding 100.0 2.3E-40 5.1E-45 378.9 22.9 216 384-610 3-222 (301)
427 PRK11144 modC molybdate transp 100.0 3.4E-40 7.3E-45 384.4 24.6 212 1043-1272 2-221 (352)
428 PRK14244 phosphate ABC transpo 100.0 2.3E-40 4.9E-45 370.8 22.2 222 384-615 6-243 (251)
429 PRK14262 phosphate ABC transpo 100.0 4E-40 8.6E-45 368.8 24.2 224 383-616 3-241 (250)
430 cd03247 ABCC_cytochrome_bd The 100.0 2.6E-40 5.7E-45 349.9 21.4 178 384-602 1-178 (178)
431 COG1137 YhbG ABC-type (unclass 100.0 1.8E-41 3.9E-46 338.0 11.6 224 382-611 3-230 (243)
432 cd03301 ABC_MalK_N The N-termi 100.0 2.3E-40 5E-45 361.7 21.5 207 384-602 1-213 (213)
433 PRK11231 fecE iron-dicitrate t 100.0 3.8E-40 8.2E-45 369.7 23.7 212 384-609 3-227 (255)
434 cd03257 ABC_NikE_OppD_transpor 100.0 2.8E-40 6E-45 365.3 22.4 213 384-602 2-228 (228)
435 PRK13548 hmuV hemin importer A 100.0 6.4E-40 1.4E-44 367.7 25.6 217 383-609 2-230 (258)
436 COG4598 HisP ABC-type histidin 100.0 4.8E-41 1E-45 327.6 14.1 220 383-613 6-245 (256)
437 PRK11124 artP arginine transpo 100.0 6.7E-40 1.4E-44 365.1 25.4 216 384-609 3-230 (242)
438 cd03262 ABC_HisP_GlnQ_permease 100.0 2.4E-40 5.1E-45 361.7 21.3 202 1043-1258 1-213 (213)
439 PRK13648 cbiO cobalt transport 100.0 4.9E-40 1.1E-44 371.3 24.5 220 383-610 7-232 (269)
440 TIGR01277 thiQ thiamine ABC tr 100.0 4.5E-40 9.7E-45 358.9 23.3 203 1043-1263 1-212 (213)
441 PRK14271 phosphate ABC transpo 100.0 5.1E-40 1.1E-44 371.4 24.6 223 383-613 21-255 (276)
442 PRK11300 livG leucine/isoleuci 100.0 4.6E-40 1E-44 369.6 24.1 223 383-610 5-244 (255)
443 cd03225 ABC_cobalt_CbiO_domain 100.0 1.9E-40 4.1E-45 361.8 20.2 205 385-597 1-211 (211)
444 TIGR02673 FtsE cell division A 100.0 2.7E-40 5.9E-45 361.4 21.3 201 384-597 2-214 (214)
445 PRK14253 phosphate ABC transpo 100.0 5.8E-40 1.2E-44 367.3 24.4 220 383-612 3-236 (249)
446 PRK13638 cbiO cobalt transport 100.0 4.5E-40 9.8E-45 372.0 23.6 217 384-610 2-226 (271)
447 PRK14260 phosphate ABC transpo 100.0 5.5E-40 1.2E-44 369.0 24.1 221 382-612 6-246 (259)
448 PRK14254 phosphate ABC transpo 100.0 8.8E-40 1.9E-44 370.8 25.9 220 382-611 38-271 (285)
449 TIGR01188 drrA daunorubicin re 100.0 2.9E-40 6.4E-45 378.7 22.1 201 1058-1270 6-214 (302)
450 PRK10418 nikD nickel transport 100.0 8E-40 1.7E-44 366.6 25.1 226 1042-1281 4-243 (254)
451 PRK00349 uvrA excinuclease ABC 100.0 3.2E-39 7E-44 408.5 33.5 110 1171-1280 818-938 (943)
452 PRK14272 phosphate ABC transpo 100.0 7.3E-40 1.6E-44 367.3 24.1 225 383-615 4-242 (252)
453 PRK13639 cbiO cobalt transport 100.0 5.7E-40 1.2E-44 371.4 23.3 218 384-610 2-227 (275)
454 PRK09984 phosphonate/organopho 100.0 9.8E-40 2.1E-44 367.9 25.2 223 1042-1281 4-251 (262)
455 COG0411 LivG ABC-type branched 100.0 1.6E-40 3.5E-45 345.7 17.2 221 384-611 5-241 (250)
456 cd03235 ABC_Metallic_Cations A 100.0 2.5E-40 5.5E-45 361.2 19.7 202 385-602 1-213 (213)
457 cd03290 ABCC_SUR1_N The SUR do 100.0 1E-39 2.2E-44 357.6 24.3 210 385-597 2-218 (218)
458 PRK14266 phosphate ABC transpo 100.0 1.2E-39 2.7E-44 364.9 25.4 223 383-615 3-240 (250)
459 PRK10247 putative ABC transpor 100.0 4.8E-40 1E-44 361.4 21.6 213 383-605 7-223 (225)
460 COG0444 DppD ABC-type dipeptid 100.0 6E-40 1.3E-44 357.2 22.0 230 1043-1280 2-254 (316)
461 PRK10908 cell division protein 100.0 1.3E-39 2.8E-44 357.9 24.9 208 384-600 2-217 (222)
462 PRK10253 iron-enterobactin tra 100.0 1.1E-39 2.4E-44 367.6 25.0 214 382-609 6-233 (265)
463 TIGR03873 F420-0_ABC_ATP propo 100.0 5.9E-40 1.3E-44 368.3 22.7 221 384-609 2-226 (256)
464 PRK11701 phnK phosphonate C-P 100.0 1.2E-39 2.5E-44 366.4 25.1 225 383-617 6-249 (258)
465 COG0410 LivF ABC-type branched 100.0 7.6E-40 1.7E-44 338.1 21.4 220 1043-1271 4-228 (237)
466 cd03292 ABC_FtsE_transporter F 100.0 5.4E-40 1.2E-44 359.2 21.6 206 384-598 1-214 (214)
467 PRK15093 antimicrobial peptide 100.0 8.9E-40 1.9E-44 377.9 24.5 230 383-619 3-258 (330)
468 PRK14252 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 367.3 25.2 225 381-615 14-255 (265)
469 TIGR01978 sufC FeS assembly AT 100.0 7.2E-40 1.6E-44 365.6 22.9 214 1043-1269 1-234 (243)
470 PRK14275 phosphate ABC transpo 100.0 1E-39 2.2E-44 370.9 24.4 224 382-615 38-276 (286)
471 PRK10419 nikE nickel transport 100.0 8.2E-40 1.8E-44 368.7 23.5 227 1043-1277 4-248 (268)
472 cd03269 ABC_putative_ATPase Th 100.0 3.4E-40 7.4E-45 359.4 19.4 205 384-602 1-210 (210)
473 PRK13547 hmuV hemin importer A 100.0 9.4E-40 2E-44 367.3 23.3 221 384-609 2-244 (272)
474 PRK11144 modC molybdate transp 100.0 1E-39 2.2E-44 380.5 24.4 212 384-612 2-221 (352)
475 COG1123 ATPase components of v 100.0 6.8E-40 1.5E-44 382.4 22.9 234 382-619 279-529 (539)
476 COG1131 CcmA ABC-type multidru 100.0 1.1E-39 2.3E-44 369.1 23.8 215 1042-1270 4-227 (293)
477 PRK14265 phosphate ABC transpo 100.0 2.9E-39 6.3E-44 365.2 27.2 221 382-612 19-261 (274)
478 PRK14241 phosphate transporter 100.0 1.2E-39 2.7E-44 366.2 24.0 218 383-610 4-243 (258)
479 COG1131 CcmA ABC-type multidru 100.0 5.7E-40 1.2E-44 371.4 21.3 214 383-610 4-227 (293)
480 PRK10584 putative ABC transpor 100.0 1.3E-39 2.7E-44 359.7 23.5 212 383-601 6-227 (228)
481 cd03246 ABCC_Protease_Secretio 100.0 9.2E-40 2E-44 343.8 21.4 172 384-598 1-173 (173)
482 cd03262 ABC_HisP_GlnQ_permease 100.0 1.1E-39 2.3E-44 356.6 22.5 205 384-598 1-213 (213)
483 cd03300 ABC_PotA_N PotA is an 100.0 9.6E-40 2.1E-44 361.0 22.3 215 384-610 1-221 (232)
484 PRK14263 phosphate ABC transpo 100.0 2.2E-39 4.8E-44 363.4 25.5 220 383-612 8-248 (261)
485 PRK14258 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 365.4 24.2 222 382-613 6-249 (261)
486 PRK11248 tauB taurine transpor 100.0 1.1E-39 2.4E-44 364.5 22.8 203 1043-1264 2-215 (255)
487 TIGR00968 3a0106s01 sulfate AB 100.0 1.8E-39 3.8E-44 359.9 23.8 215 384-610 1-221 (237)
488 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.8E-39 3.8E-44 354.0 23.4 201 384-602 1-211 (211)
489 cd03234 ABCG_White The White s 100.0 8.4E-40 1.8E-44 360.2 20.9 211 1043-1262 4-226 (226)
490 PRK14255 phosphate ABC transpo 100.0 1.9E-39 4.1E-44 363.8 24.0 221 383-613 5-240 (252)
491 PRK10771 thiQ thiamine transpo 100.0 3E-39 6.5E-44 357.3 25.0 209 384-610 2-220 (232)
492 PRK15112 antimicrobial peptide 100.0 2.7E-39 5.9E-44 364.5 25.1 222 383-611 4-241 (267)
493 TIGR02142 modC_ABC molybdenum 100.0 1.5E-39 3.3E-44 379.7 23.8 213 1047-1276 4-228 (354)
494 PRK14264 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 369.9 25.7 219 382-610 44-290 (305)
495 COG4555 NatA ABC-type Na+ tran 100.0 8.6E-40 1.9E-44 326.4 17.7 214 1043-1270 2-223 (245)
496 cd03233 ABC_PDR_domain1 The pl 100.0 1.8E-39 3.9E-44 350.2 21.7 190 1043-1262 4-202 (202)
497 TIGR01188 drrA daunorubicin re 100.0 1.1E-39 2.4E-44 374.0 21.2 204 399-610 6-214 (302)
498 PRK14246 phosphate ABC transpo 100.0 2.5E-39 5.3E-44 362.2 23.5 226 383-618 10-250 (257)
499 TIGR02982 heterocyst_DevA ABC 100.0 2.2E-39 4.7E-44 355.3 22.5 205 1043-1258 2-219 (220)
500 TIGR02323 CP_lyasePhnK phospho 100.0 4.3E-39 9.2E-44 361.2 24.8 228 1042-1279 3-248 (253)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-214 Score=1957.11 Aligned_cols=1215 Identities=58% Similarity=0.933 Sum_probs=1117.8
Q ss_pred CccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000777 43 SVPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFL 122 (1288)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 122 (1288)
..++.++|+|+...++.+++++.+++++.|+++|++.++++++++.+....+. ...+.+..+++++++++++.++..|+
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~-~~~~~~~~~~l~~~~lg~~~~~~~~~ 90 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNK-IASSEVSKVALYFVYLGVGVFISGFI 90 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67799999999999999999999999999999999999999999998754332 33356778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 123 QVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIK 202 (1288)
Q Consensus 123 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 202 (1288)
+..||.+.++|...++|.++++.++|++++|||++ .+|++.+++++|++.|++++++.+..+++.+.+++++++++|++
T Consensus 91 q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 91 QVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986 77999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 000777 203 GWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQ 282 (1288)
Q Consensus 203 ~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 282 (1288)
.|+|+++++.+.|++++....+.+.+.+...+.+.+++++.++++|++.++|||.+|+.|+.+.++|.+.++...+...+
T Consensus 170 ~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~ 249 (1228)
T KOG0055|consen 170 GWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIK 249 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000777 283 EGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETIN 362 (1288)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 362 (1288)
...+.++..++..++.++.+++.+|||+.++..+..++|.+++++.+++.+...+++..|++..+..+.+|+.++++.++
T Consensus 250 ~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~ 329 (1228)
T KOG0055|consen 250 KGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETID 329 (1228)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 000777 363 RKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGE 442 (1288)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 442 (1288)
..|+++.....+.......|.|+|+||+|+||++++.++|+|+||+|++|+++||||||||||||++++|.|+|+|++|+
T Consensus 330 ~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~ 409 (1228)
T KOG0055|consen 330 RKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGE 409 (1228)
T ss_pred CCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCce
Confidence 99987765433334455679999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCC
Q 000777 443 VLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQ 522 (1288)
Q Consensus 443 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 522 (1288)
|++||.|+++++.+|+|++||+|+|+|.||++||+|||.||+|+++.+++.++|+++++++|+..||+||+|.+||+|.+
T Consensus 410 V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~q 489 (1228)
T KOG0055|consen 410 VLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQ 489 (1228)
T ss_pred EEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 523 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 523 LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
|||||||||||||||++||+||||||||||||+++|+.++++|++.+++||+|+|||||+++++||+|+||++|+|+|.|
T Consensus 490 LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G 569 (1228)
T KOG0055|consen 490 LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQG 569 (1228)
T ss_pred CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCC
Q 000777 603 THSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQ 682 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1288)
+|+||++.+ |.|.++++.|+....++..+++.+ . .... ..+.+.+. ..... .... .... .
T Consensus 570 ~h~ELi~~~-G~Y~~lv~~Q~~~~~~~~~~~~~~--~-~~~~--~~s~~~s~-----~~~~~---~~~~-~~~~-----~ 629 (1228)
T KOG0055|consen 570 THDELIALG-GIYSSLVRLQELEKAAEDEEEEES--L-KEER--SRSLKSSS-----SSPSL---SRGS-NRSN-----L 629 (1228)
T ss_pred CHHHHHhcc-chHHHHHHHHhhhhhhhccccccc--h-hhhh--hhcccccc-----ccccc---cCCc-cccc-----c
Confidence 999999985 999999999976554332000000 0 0000 00000000 00000 0000 0000 0
Q ss_pred cccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ccchhchH
Q 000777 683 FADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPP-HELKKDSR 761 (1288)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 761 (1288)
.......+...... ........+.+++.+.+|.|++++++++.+++.+..+|+++++++.++..+..++ +.......
T Consensus 630 ~~~~~~~e~~~~~~--~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~ 707 (1228)
T KOG0055|consen 630 LSVKPEGEDPEEPV--SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVR 707 (1228)
T ss_pred cccccccccccccc--ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHH
Confidence 00000000000000 1111456788999999999999999999999999999999999999999998553 44555556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHH
Q 000777 762 FWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDAL 841 (1288)
Q Consensus 762 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l 841 (1288)
.|.++|++++++..++.+++.+++..++++++.++|.++|+++++++++|||.++|+ |.|.+|+.+|...++..+.+.+
T Consensus 708 ~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl 786 (1228)
T KOG0055|consen 708 AWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRL 786 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchH
Q 000777 842 ARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAE 921 (1288)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~ 921 (1288)
..+++++..+++++++.|+++|++++++++++|++++..+.+.+++.....+.+....++.+...|++.+++||++|+.|
T Consensus 787 ~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e 866 (1228)
T KOG0055|consen 787 SLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAE 866 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 922 EKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSS 1001 (1288)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1288)
+++.+.|.+.++...+...++..+++..+++++++.++.+++++|+|.+++.+|.+++.+++.++..+.+.+..+.+..+
T Consensus 867 ~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s 946 (1228)
T KOG0055|consen 867 EKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASS 946 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCC
Q 000777 1002 FSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESG 1081 (1288)
Q Consensus 1002 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SG 1081 (1288)
+.++..++..++.+++++++++++.++..+.+...+..+|+|+|+||+|+||++|+.+||+|+||+|++||++|||||||
T Consensus 947 ~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SG 1026 (1228)
T KOG0055|consen 947 YAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSG 1026 (1228)
T ss_pred hCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCC
Confidence 99999999999999999999998776654444445668899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhch
Q 000777 1082 SGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANA 1161 (1288)
Q Consensus 1082 sGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l 1161 (1288)
|||||++.||.|||+|++|.|.|||+||+++++++||++|++|+|||.||++||||||.||. .+++++||.+|++.|++
T Consensus 1027 sGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~-~~vs~~eIi~Aak~ANa 1105 (1228)
T KOG0055|consen 1027 SGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGS-EEVSEEEIIEAAKLANA 1105 (1228)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccC-CCCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999994 35899999999999999
Q ss_pred hHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCc
Q 000777 1162 HKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRL 1241 (1288)
Q Consensus 1162 ~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl 1241 (1288)
|+||.+||+||||.|||+|.+||||||||||||||++|||+||||||||||||.++|+.||++|++...+||+|+|||||
T Consensus 1106 H~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRL 1185 (1228)
T KOG0055|consen 1106 HNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRL 1185 (1228)
T ss_pred HHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhhc
Q 000777 1242 STIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSS 1284 (1288)
Q Consensus 1242 ~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1284 (1288)
+||++||.|+|+++|+|+|+|||+||+++ +|.|++|++.|..
T Consensus 1186 STIqnaD~I~Vi~~G~VvE~GtH~~L~~~-~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1186 STIQNADVIAVLKNGKVVEQGTHDELLAK-RGIYFRLVQLQSS 1227 (1228)
T ss_pred hhhhcCCEEEEEECCEEEecccHHHHHhC-CCchHHHhhhccC
Confidence 99999999999999999999999999995 9999999998864
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1e-172 Score=1714.04 Aligned_cols=1222 Identities=31% Similarity=0.506 Sum_probs=1019.5
Q ss_pred CCccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 000777 42 ESVPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASF 121 (1288)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 121 (1288)
.+.+|+.+|+|+.+.++.+++++++++++.+++.|+.|++++.++|.+... +.+..+++++++++++.+++.|
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~-------~~~~~~~~~~~~~~i~~~~~~~ 115 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG-------ENVNDIIFSLVLIGIFQFILSF 115 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------chHHHHHHHHHHHHHHHHHHHH
Confidence 456899999999988888899999999999999999999999999976421 1123345567778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 122 LQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFI 201 (1288)
Q Consensus 122 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 201 (1288)
++.+++.+.++++..++|.++|++++++|++|||.. +.|++++|+++|++.++..+...+..++..+++++++++++|+
T Consensus 116 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~ 194 (1466)
T PTZ00265 116 ISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLF 194 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999985 8999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 000777 202 KGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGV 281 (1288)
Q Consensus 202 ~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 281 (1288)
++|.+++++++++|+++++..++.+++++..++.++..++..+.+.|+++|+++||+|+.|+.+.++|.+......+...
T Consensus 195 ~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~ 274 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYIL 274 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888888888999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 282 QEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEE--------GYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAA 353 (1288)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~--------~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 353 (1288)
+.....++..++..++.++.+++++|+|++++.+| .+++|.+++++.+.+.....+..+.+.+..++.+.+|
T Consensus 275 k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a 354 (1466)
T PTZ00265 275 KANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEA 354 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888888888888889999999999999886 5788999888877777777778888889999999999
Q ss_pred HHHHHHHhccCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHH
Q 000777 354 AFKMFETINRKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIE 433 (1288)
Q Consensus 354 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~ 433 (1288)
++|++++++.+|+.+... .+...+. .+.|+++||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|+
T Consensus 355 ~~ri~~ii~~~~~~~~~~-~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~ 432 (1466)
T PTZ00265 355 TNSLYEIINRKPLVENND-DGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIE 432 (1466)
T ss_pred HHHHHHHHcCCCCCCCCC-CCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHH
Confidence 999999999877654311 1111122 24799999999998654567999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEE-CCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCC---------------------------
Q 000777 434 RFYDPQAGEVLI-DGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKD--------------------------- 485 (1288)
Q Consensus 434 g~~~~~~G~i~~-~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--------------------------- 485 (1288)
|+|+|++|+|.+ ||+++++++..++|++||||+|+|.||++||+|||.+|.+
T Consensus 433 gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (1466)
T PTZ00265 433 RLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRN 512 (1466)
T ss_pred HhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccc
Confidence 999999999999 5799999999999999999999999999999999999742
Q ss_pred ------------------------------CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 486 ------------------------------DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 486 ------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
+.++++++++++.+++++++.++|+||||.+|++|.+|||||||||+|||
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIAR 592 (1466)
T PTZ00265 513 SCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIAR 592 (1466)
T ss_pred cccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHH
Confidence 24567899999999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCC-----------------
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRNADMIAVIHRG----------------- 596 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G----------------- 596 (1288)
||+++|+|||||||||+||+++++.+++.|+++. +++|+|+||||+++++.||+|++|++|
T Consensus 593 All~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~ 672 (1466)
T PTZ00265 593 AIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTK 672 (1466)
T ss_pred HHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccc
Confidence 9999999999999999999999999999999986 479999999999999889999999986
Q ss_pred ------------------------------EEeEecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhh
Q 000777 597 ------------------------------KIVEKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLR 646 (1288)
Q Consensus 597 ------------------------------~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (1288)
+|+|+|+|+||++..+|.|+.+++.|......................
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~-- 750 (1466)
T PTZ00265 673 DNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSA-- 750 (1466)
T ss_pred cccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccc--
Confidence 599999999999855899999998775432111000000000000000
Q ss_pred cccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCC-CCC--Cc---ccC-CchhhHhhhhhcCChhH
Q 000777 647 HSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGP-SQP--TE---EVA-PEVPTRRLAYLNKPEIP 719 (1288)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~---~~~-~~~~~~~~~~~~~~~~~ 719 (1288)
........ ........ ... .......... .............. ..+ .+ ... ....+.+++.+.+++++
T Consensus 751 ~~~~~~~~--~~~~~~~~-~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (1466)
T PTZ00265 751 YKDSERGY--DPDEMNGN-SKH-ENESASNKKS-CKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKK 825 (1466)
T ss_pred cccccccc--cccccccc-ccc-cccccccccc-cccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 00000000 00000000 000 0000000000 00000000000000 000 00 000 11122333444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 720 VILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSM 799 (1288)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 799 (1288)
.++++++++++.+...|+++++++.+++.++.. .........|.+++++++++.+++.+++.++..+++.++..++|.+
T Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~ 904 (1466)
T PTZ00265 826 DVTIIALSILVAGGLYPVFALLYAKYVSTLFDF-ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRR 904 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888888899999999999999999877642 1122234567788888888899999999999999999999999999
Q ss_pred HHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000777 800 CFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVS 879 (1288)
Q Consensus 800 l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~ 879 (1288)
+|++++++|++|||++++++|++++|+++|++.++..+...+..++..++.++++++++++++|.++++++++++++..+
T Consensus 905 lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~ 984 (1466)
T PTZ00265 905 LFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRV 984 (1466)
T ss_pred HHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999877999999999999999999999999999999999999999999999999988876555444333
Q ss_pred HHHHHHHHHH--HHHH-------------HHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 880 GYTQMKFMKG--FSAD-------------AKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGM 944 (1288)
Q Consensus 880 ~~~~~~~~~~--~~~~-------------~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1288)
.....+.... ..+. ..+...+....+.|++.|++|||+|+.|+++.++|.+..+...+...+...
T Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1466)
T PTZ00265 985 FAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTL 1064 (1466)
T ss_pred HHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221111 0000 123355678899999999999999999999999999999999998888888
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000777 945 VSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRES 1024 (1288)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~ 1024 (1288)
..+...++++++.++..++++|+|++++..|.+++|++++++.++.+...++..+..+.++..++..+.+|++++++.++
T Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~ 1144 (1466)
T PTZ00265 1065 VNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKS 1144 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 88888999999999999999999999999999999999998877766667788899999999999999999999998765
Q ss_pred CCCCCCCCCcc---ccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC----
Q 000777 1025 KIDPSDESGTI---LEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP---- 1097 (1288)
Q Consensus 1025 ~~~~~~~~~~~---~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p---- 1097 (1288)
+.+..+..... ++...|.|+|+||+|+||++++.+||+|+||+|+|||+||||||||||||||+++|+|||+|
T Consensus 1145 ~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~ 1224 (1466)
T PTZ00265 1145 NIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDH 1224 (1466)
T ss_pred cCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccc
Confidence 43221111111 12345789999999999976666899999999999999999999999999999999999999
Q ss_pred --------------------------------------------------CCceEEECCeeccCCCHHHHhcceEEEccC
Q 000777 1098 --------------------------------------------------DAGHITLDGVEIQKLQLKWLRQQMGLVSQE 1127 (1288)
Q Consensus 1098 --------------------------------------------------~~G~I~idG~di~~i~~~~lR~~i~~V~Qd 1127 (1288)
++|+|++||+||+++++++||++|+|||||
T Consensus 1225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qe 1304 (1466)
T PTZ00265 1225 HIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQE 1304 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCC
Confidence 699999999999999999999999999999
Q ss_pred CCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEe
Q 000777 1128 PVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLD 1207 (1288)
Q Consensus 1128 ~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLD 1207 (1288)
|+||+|||||||.||. +++++++|++|++.|++++||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||
T Consensus 1305 p~LF~gTIreNI~~g~-~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1305 PMLFNMSIYENIKFGK-EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred CccccccHHHHHhcCC-CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999995 479999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhhcCEEEEEeC----CEEE-EecChhhhhcCCCcHHHHHHH
Q 000777 1208 EATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKNADMIAVVKN----GVIV-EKGKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1208 EaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~----G~Iv-e~Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
|||||||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |+++ |.|+|+||+++++|.|++|++
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~ 1463 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVK 1463 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHh
Confidence 9999999999999999999984 68999999999999999999999999 9954 999999999844899999998
Q ss_pred Hh
Q 000777 1281 LH 1282 (1288)
Q Consensus 1281 ~~ 1282 (1288)
.|
T Consensus 1464 ~~ 1465 (1466)
T PTZ00265 1464 LA 1465 (1466)
T ss_pred hc
Confidence 76
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-162 Score=1535.50 Aligned_cols=1140 Identities=24% Similarity=0.306 Sum_probs=871.1
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Q 000777 72 GLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTILRQDV 151 (1288)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~ 151 (1288)
..+..+.|+++..+++.+.....+ .. ...++.+++.++..+-+.+. ..+.+...+++.++|..+...++++.+
T Consensus 214 ~~~~~~~P~lL~~li~~~~~~~~~---~~---~g~~~a~~lf~~~~l~~l~~-~~~~~~~~~~g~r~R~al~~~IY~K~L 286 (1381)
T KOG0054|consen 214 DLAGFVGPLLLKKLILFFSEKRLP---LN---NGYLLAVLLFLASLLQSLLL-HQYFFVSFRVGMRLRSALISAIYRKAL 286 (1381)
T ss_pred HHHccccHHHHHHHHHHhcCCCcc---cc---hhHHHHHHHHHHHHHHHHHH-hHHHHHHHhhhhhHHHHHHHHHHHhhh
Confidence 333556677888888877543111 11 11111122222223322222 223445678888888877666665544
Q ss_pred hhhhc---cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Q 000777 152 AFFDN---ETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLL----TLVMLSSIPLLAMSGGVM 224 (1288)
Q Consensus 152 ~~f~~---~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l----~l~~~~~~p~~~~~~~~~ 224 (1288)
..-.. ..+.|+++|.+++|+++++++.. +++.+|....-++++.++-|.. +++.++++.+++.+..++
T Consensus 287 ~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~-----~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 287 RLSNSARGETTVGEIVNLMSVDAQRLSDAAC-----FLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred cCchhhccCCCcchhhhhhhhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 33211 23789999999999999999864 5556665555555555444442 445555555566667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 225 AIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYAL 304 (1288)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (1288)
++..++.+.+.++..+++...++|.++|||+||+|+||+.|.++..+.++++.+...+..+..++...+......++.++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999998888877766655444433333
Q ss_pred HHHHHHHH-HhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCccc
Q 000777 305 SVWYGGKL-ILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIRGD 383 (1288)
Q Consensus 305 ~~~~g~~~-v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 383 (1288)
.++.+. ...+.+++..+|+.+..+..+..|+..+...+..+.++.++.+|+.+++..++. ++......+..+.+..
T Consensus 442 --tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~-~~~~~~~~~~~~~~~~ 518 (1381)
T KOG0054|consen 442 --TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEEL-DPDSVERSPDEAGENA 518 (1381)
T ss_pred --HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CccccccCCCCCCCce
Confidence 233333 446678888999999888888899999888899999999999999999976543 2221111122233457
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|.+|+|++....+.|+||||+|++|+.+||||+.|||||||+.+|+|+++..+|++.++| .++
T Consensus 519 i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g-------------sia 585 (1381)
T KOG0054|consen 519 IEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG-------------SVA 585 (1381)
T ss_pred EEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-------------eEE
Confidence 9999999999764445699999999999999999999999999999999999999999999999 699
Q ss_pred EEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000777 464 LVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRI 543 (1288)
Q Consensus 464 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~i 543 (1288)
||||+||+|+|||||||.||.| .++++.+++.+.|.+.++++.||.|+.|.|||+|.+|||||||||+||||+|+|+||
T Consensus 586 Yv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adI 664 (1381)
T KOG0054|consen 586 YVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADI 664 (1381)
T ss_pred EeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCE
Confidence 9999999999999999999987 567889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHH-HHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHHHHH
Q 000777 544 LLLDEATSALDAESEKV-VQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 544 lllDEpts~lD~~~~~~-i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 622 (1288)
++||||+||+|+++.++ +.++|+.+.++||+|+|||.++.+++||+|++|++|+|++.|+++|+++. +..|.++....
T Consensus 665 YLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~-~~~~~~l~~~~ 743 (1381)
T KOG0054|consen 665 YLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS-GGDFAELAHEE 743 (1381)
T ss_pred EEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc-chhHHHHhhcc
Confidence 99999999999998665 56678888899999999999999999999999999999999999999976 67777763222
Q ss_pred hhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCC--CCCCcc
Q 000777 623 EANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGP--SQPTEE 700 (1288)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 700 (1288)
....+.+......+. . ...+. ...+.. ..... ...........+. .+.+++
T Consensus 744 ~~~~~~~~~~~~~~~-~---~~~~~-----~~~~~~-----------~~~~~-------~~~~~~~~~~~~~~~~~~ee~ 796 (1381)
T KOG0054|consen 744 ESEQEEEASEKDLES-G---ESSRE-----SESRSL-----------ESLSS-------EEEKSKDEKEEEDKLVQEEER 796 (1381)
T ss_pred chhhccccccccccc-c---ccccc-----hhhhhh-----------hhhcc-------cccccccccchhhHHHHHHHH
Confidence 111111000000000 0 00000 000000 00000 0000000000000 001112
Q ss_pred cCCchhhHhhhhhcCChhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-cch---hchHHHHHHHHHHHHHH
Q 000777 701 VAPEVPTRRLAYLNKPEIPVI--LAGTIAAMANGVILPIYGLLISSVIETFFKPPH-ELK---KDSRFWALIYLALGAGS 774 (1288)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~l~~~~ 774 (1288)
..+.+.+.-+..|.+...+++ .+.++..+....+.... .++-.+|.... ... .+..+|..+|.+++++.
T Consensus 797 ~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~-----~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~ 871 (1381)
T KOG0054|consen 797 ETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIAS-----NYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVAS 871 (1381)
T ss_pred hcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhcCCcccccccCCCcchHHHHHHHHHHHH
Confidence 334444554444444322222 11122222222222222 22333333211 111 35678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 775 FLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAG 854 (1288)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~ 854 (1288)
.++..++.+.+...+.++++.||+.++++++++||+|||+ +|.|+|+|||++|++.+|..++..+..++..++.+++.
T Consensus 872 ~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~ 949 (1381)
T KOG0054|consen 872 SLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGI 949 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhHHHHHHhchHHHHHHHHHH
Q 000777 855 LIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKY----EEASQVANDAVGSIRTVASFCAEEKVMQLYKK 930 (1288)
Q Consensus 855 ~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~ 930 (1288)
++++.+..|+.. ++++|+.+++.+++..| .+.+++.++.. +...+|++|+++|+.|||+|+.+++|.+++.+
T Consensus 950 ~~vi~~~~P~fl---i~~~pl~v~~~~~~~~Y-~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~ 1025 (1381)
T KOG0054|consen 950 LVVISYVTPWFL---IAIIPLGVIYYFVQRYY-LATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDE 1025 (1381)
T ss_pred HHHhhHHhHHHH---HHHHHHHHHHHHHHHHH-HHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHH
Confidence 999888877644 44455555554444444 44566666554 45589999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 931 KCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVE--DGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNK 1008 (1288)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1288)
..|.+.+..+-......+. +..+-++...+++..+...+. .+..+.|..-..+.+.......++.......+.+.
T Consensus 1026 ~~D~~~~~~f~~~~a~RWl---a~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn 1102 (1381)
T KOG0054|consen 1026 LIDENSRAFFLSISANRWL---AVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELEN 1102 (1381)
T ss_pred HhhhhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999887755433222222 112222222222222222222 22255676666666777777778888888899999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCC--CccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHH
Q 000777 1009 AKSAAASIFAIIDRESKIDPSDES--GTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKST 1086 (1288)
Q Consensus 1009 ~~~~~~ri~~~~~~~~~~~~~~~~--~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKST 1086 (1288)
.+.++||+.++.+.+++.+...+. +++.++.+|+|+|+|++.+|.+. .++|||||||+|+|||||||||||||||||
T Consensus 1103 ~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSS 1181 (1381)
T KOG0054|consen 1103 NMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSS 1181 (1381)
T ss_pred cchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHH
Confidence 999999999999976662211111 34456688999999999999754 468999999999999999999999999999
Q ss_pred HHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHH
Q 000777 1087 VVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFIC 1166 (1288)
Q Consensus 1087 L~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~ 1166 (1288)
|+++|+|+.+|.+|+|.|||+||.++++++||+++++|||||+||+||+|+||++. .+++|++||+|++.+++.++|.
T Consensus 1182 L~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf--~e~sD~~IW~ALe~~~Lk~~v~ 1259 (1381)
T KOG0054|consen 1182 LILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF--DEYSDDEIWEALERCQLKDVVS 1259 (1381)
T ss_pred HHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc--cccCHHHHHHHHHHhChHHHHh
Confidence 99999999999999999999999999999999999999999999999999999764 5899999999999999999999
Q ss_pred hhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh
Q 000777 1167 SLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN 1246 (1288)
Q Consensus 1167 ~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~ 1246 (1288)
++|+|||++|.|+|.|||.||||++||||||||+++||+|||||+++|++|+..||++||+.|++||||+||||++||.+
T Consensus 1260 ~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd 1339 (1381)
T KOG0054|consen 1260 SLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMD 1339 (1381)
T ss_pred hCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhhcc
Q 000777 1247 ADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSA 1285 (1288)
Q Consensus 1247 ~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~~ 1285 (1288)
||||+|||+|+|+|+|+|.+|++++++.|++++.+....
T Consensus 1340 ~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~ 1378 (1381)
T KOG0054|consen 1340 SDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALS 1378 (1381)
T ss_pred cCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHh
Confidence 999999999999999999999999899998887765543
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.6e-155 Score=1563.53 Aligned_cols=1155 Identities=19% Similarity=0.247 Sum_probs=845.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 62 IIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGL 141 (1288)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~ 141 (1288)
+++.++.++..++..+.|++++.+++.+... ... ....... ..+++..++..++..-..+.....+.++...++..
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~-~~~--~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 379 (1622)
T PLN03130 304 WLGGFFKIGNDLSQFVGPLLLNLLLESMQNG-EPA--WIGYIYA-FSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAA 379 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccc--hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666667777788899988865432 110 1111111 11111111111111111111335667777777789
Q ss_pred HHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000777 142 YLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSG 221 (1288)
Q Consensus 142 ~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~ 221 (1288)
+++|+++++..++++. ++|+++|++++|++.+++.+. .+..++...+.+++++++++..-...+++.++++.+++.+.
T Consensus 380 i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~ 457 (1622)
T PLN03130 380 VFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQ 457 (1622)
T ss_pred HHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 899999999999999999874 34444444444444433333211111222222233334445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 222 GVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCS 301 (1288)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1288)
.++.++.++..++.++..+++.+.+.|.++|+++||+|++|+.+.+++.+.++++.+...+.....++...+..... .
T Consensus 458 ~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~--~ 535 (1622)
T PLN03130 458 TFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIP--V 535 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 56677778888888889999999999999999999999999999999999998888777666655554433322221 1
Q ss_pred HHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCc
Q 000777 302 YALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIR 381 (1288)
Q Consensus 302 ~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 381 (1288)
.+.++++|++++.++.+++|.+++++.++..+..|+..+...+..+..+.++++|+.++++.++..+... .......
T Consensus 536 ~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~---~~~~~~~ 612 (1622)
T PLN03130 536 LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN---PPLEPGL 612 (1622)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC---CcccCCC
Confidence 2345567888888999999999999988888888999888889999999999999999997654321111 1111113
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC-cEEEECCeeCCCCCHHHHhc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQA-GEVLIDGINLKEFQLQWIRK 460 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~-G~i~~~g~~~~~~~~~~~r~ 460 (1288)
+.|+++|++|+|+.++++++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|.+. +
T Consensus 613 ~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~-------------~ 679 (1622)
T PLN03130 613 PAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR-------------G 679 (1622)
T ss_pred CceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc-------------C
Confidence 46999999999975445679999999999999999999999999999999999999999 999864 4
Q ss_pred ceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 461 KIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
+|+||+|+||+|++||||||.||.| .++++++++++.|+++++++.||+|++|.+||+|.+|||||||||+||||+|++
T Consensus 680 ~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~ 758 (1622)
T PLN03130 680 TVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSN 758 (1622)
T ss_pred eEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999987 578899999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHH-HHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHH
Q 000777 541 PRILLLDEATSALDAESEKVV-QEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 619 (1288)
|+||||||||||||+++++.+ .++++...+++|+|+|||+++.+..||+|++|++|+|+++|+|+|++++ ++.|.++.
T Consensus 759 ~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~-~~~~~~l~ 837 (1622)
T PLN03130 759 SDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN-GPLFQKLM 837 (1622)
T ss_pred CCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc-chhHHHHH
Confidence 999999999999999998876 4567777788999999999999999999999999999999999999976 67888877
Q ss_pred HHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCCCCCCc
Q 000777 620 RLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGPSQPTE 699 (1288)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (1288)
..+....+..+ ...... ..+. . .. ....... .. ..... . ....... ........++
T Consensus 838 ~~~~~~~~~~~-~~~~~~-~~~~----~------~~-~~~~~~~--~~----~~~~~--~--~~~~~~~-~~~~~~~~e~ 893 (1622)
T PLN03130 838 ENAGKMEEYVE-ENGEEE-DDQT----S------SK-PVANGNA--NN----LKKDS--S--SKKKSKE-GKSVLIKQEE 893 (1622)
T ss_pred Hhccccccccc-cccccc-cccc----c------cc-ccccccc--cc----ccccc--c--ccccccc-cchhhhhHHH
Confidence 54321111100 000000 0000 0 00 0000000 00 00000 0 0000000 0000000011
Q ss_pred ccCCchhhHhhhhhcCC-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHH
Q 000777 700 EVAPEVPTRRLAYLNKP-E-IPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLL 777 (1288)
Q Consensus 700 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 777 (1288)
+..+.+.+..+..|.+. . .+.+.+.++..++...+.....++++.+.+... .......+|.++|++++++..++
T Consensus 894 ~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~~~~~i~~~l~~~~~i~ 969 (1622)
T PLN03130 894 RETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGT----PKTHGPLFYNLIYALLSFGQVLV 969 (1622)
T ss_pred HhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cCCCchhHHHHHHHHHHHHHHHH
Confidence 11222334444444332 1 112112122222222222222233333332211 11122456777888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 778 SPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLII 857 (1288)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 857 (1288)
.+++.+++.+.+.+++.++|++++++++++|++|||+ +++|+++||+++|++.++..++..+..++..++.+++.+++
T Consensus 970 ~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~ 1047 (1622)
T PLN03130 970 TLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVL 1047 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999994 99999999999999999999999999999999998888888
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHH
Q 000777 858 AFTASWQLALIILVMLPLIGVSGYTQMK---FMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEA 934 (1288)
Q Consensus 858 ~~~~~~~l~lv~l~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~ 934 (1288)
+++++|...+ +++|+.+++.+.+.. ..+...+......+...+++.|++.|++|||+|+.++++.+.+.+..+.
T Consensus 1048 i~~~~~~~~~---~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~ 1124 (1622)
T PLN03130 1048 IGIVSTISLW---AIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDN 1124 (1622)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHH
Confidence 8888774332 233333322222222 2222222233344567889999999999999999999888887777776
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------cCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 935 PMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGK---------ATFSDVFKVFFSLTMTAIGISQSSSFSSD 1005 (1288)
Q Consensus 935 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1288)
..+..........+...... ++...++++.+...+..+. .++|.++ .+......++..+......
T Consensus 1125 ~~~~~~~~~~~~~wl~~~l~---~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~l---s~~~~~~~~l~~l~~~~~~ 1198 (1622)
T PLN03130 1125 NIRFTLVNMSSNRWLAIRLE---TLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLL---SYALNITSLLTAVLRLASL 1198 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHcccccccchhhhHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 65543332221111111111 1111222223333333321 2233322 2334444556666667778
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCC--CccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCC
Q 000777 1006 SNKAKSAAASIFAIIDRESKIDPSDES--GTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSG 1083 (1288)
Q Consensus 1006 ~~~~~~~~~ri~~~~~~~~~~~~~~~~--~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsG 1083 (1288)
.+....+.+|+.++++.+++.+...+. .++.++.+|.|+|+||+|+|++. .++||+|+||+|+|||+||||||||||
T Consensus 1199 ~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSG 1277 (1622)
T PLN03130 1199 AENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAG 1277 (1622)
T ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCC
Confidence 899999999999999876654221111 11122456899999999999643 347999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhH
Q 000777 1084 KSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHK 1163 (1288)
Q Consensus 1084 KSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~ 1163 (1288)
||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||+++. +++|+|+|+||+.+++++
T Consensus 1278 KSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~--~~tdeei~~Al~~a~l~~ 1355 (1622)
T PLN03130 1278 KSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN--EHNDADLWESLERAHLKD 1355 (1622)
T ss_pred HHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC--CCCHHHHHHHHHHcCcHH
Confidence 999999999999999999999999999999999999999999999999999999999873 689999999999999999
Q ss_pred HHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchh
Q 000777 1164 FICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLST 1243 (1288)
Q Consensus 1164 ~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~t 1243 (1288)
||.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++|
T Consensus 1356 ~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~t 1435 (1622)
T PLN03130 1356 VIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNT 1435 (1622)
T ss_pred HHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhhc
Q 000777 1244 IKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSS 1284 (1288)
Q Consensus 1244 i~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1284 (1288)
+++||||+||++|+|+|+|+|+||+++++|.|++|++.+..
T Consensus 1436 I~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1436 IIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcCh
Confidence 99999999999999999999999999767999999987654
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.6e-154 Score=1553.67 Aligned_cols=1153 Identities=19% Similarity=0.251 Sum_probs=848.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 62 IIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGL 141 (1288)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~ 141 (1288)
+.+.++.++..++..+.|++++.+++.+... ... .. ...+++++++..++..++.....+.....+.++...++..
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~-~~~-~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~ 379 (1495)
T PLN03232 304 WLGGIFKIGHDLSQFVGPVILSHLLQSMQEG-DPA-WV--GYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAA 379 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccc-ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666777777788999999875432 111 00 1111111111122222222111222345677777778889
Q ss_pred HHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HHH
Q 000777 142 YLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIP---LLA 218 (1288)
Q Consensus 142 ~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p---~~~ 218 (1288)
+++|+++++..++++. ++|+++|++++|++.+++.+ ..+..++...+.+++++++ +.+.+++..++.++ +++
T Consensus 380 i~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~---l~~~lg~~~l~~~~v~~l~~ 454 (1495)
T PLN03232 380 IFHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVL---LYQQLGVASLFGSLILFLLI 454 (1495)
T ss_pred HHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999874 89999999999999999986 3333333333333332222 22223333322222 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 219 MSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIV 298 (1288)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1288)
.+..++.++.++..++.++..+++.+.+.|.++|+++||+|++|+.+.+++.+.++++.+...+.....++...+.....
T Consensus 455 pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~ 534 (1495)
T PLN03232 455 PLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIP 534 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23556677888888888899999999999999999999999999999999999999888887777666554433222211
Q ss_pred HHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccC
Q 000777 299 FCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILD 378 (1288)
Q Consensus 299 ~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 378 (1288)
..+.++++|++++.++.+++|.+++++.++..+..|+..+...+..+.++.++.+|+.++++.+++.+... ....
T Consensus 535 --~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~---~~~~ 609 (1495)
T PLN03232 535 --VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN---PPLQ 609 (1495)
T ss_pred --HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc---CCcC
Confidence 12334677888888999999999999988888889998888889999999999999999998655422111 1111
Q ss_pred CCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH
Q 000777 379 DIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI 458 (1288)
Q Consensus 379 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 458 (1288)
...+.|+++|++|+|+.++++++|+|+||+|++||+++||||||||||||+++|+|+++|++|.+. .+
T Consensus 610 ~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~ 677 (1495)
T PLN03232 610 PGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VI 677 (1495)
T ss_pred CCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------Ee
Confidence 123479999999999754456899999999999999999999999999999999999999998763 24
Q ss_pred hcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 459 RKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 459 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
|++|+||+|+||||++||||||.||.+ .++++++++++.|+++++++.+|+|++|.+||+|.+|||||||||+||||+|
T Consensus 678 ~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly 756 (1495)
T PLN03232 678 RGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVY 756 (1495)
T ss_pred cCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHh
Confidence 679999999999999999999999986 6889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHH
Q 000777 539 KDPRILLLDEATSALDAESEKVVQE-ALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQ 617 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 617 (1288)
++|+||||||||||||+++++.+.+ +++...+++|+|+||||++.+..||+|++|++|+|+++|+|+|++++ ++.|.+
T Consensus 757 ~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~ 835 (1495)
T PLN03232 757 SNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKK 835 (1495)
T ss_pred cCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHH
Confidence 9999999999999999999987754 56767788999999999999999999999999999999999999976 678888
Q ss_pred HHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCCCCC
Q 000777 618 LIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGPSQP 697 (1288)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (1288)
+++.+....+.++..+. . + ... . ....... . ... .... . .... .. ........
T Consensus 836 l~~~~~~~~~~~~~~~~-~--~-~~~---~------~~~~~~~--~--~~~-~~~~--~-----~~~~-~~-~~~~~~~~ 888 (1495)
T PLN03232 836 LMENAGKMDATQEVNTN-D--E-NIL---K------LGPTVTI--D--VSE-RNLG--S-----TKQG-KR-GRSVLVKQ 888 (1495)
T ss_pred HHHhccccccccccccc-c--c-ccc---c------ccccccc--c--ccc-cccc--c-----cccc-cc-chhhhhhH
Confidence 77654321111000000 0 0 000 0 0000000 0 000 0000 0 0000 00 00000000
Q ss_pred CcccCCchhhHhhhhhcCChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-chhchHHHHHHHHHHHHHH
Q 000777 698 TEEVAPEVPTRRLAYLNKPEI--PVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHE-LKKDSRFWALIYLALGAGS 774 (1288)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~ 774 (1288)
+++..+.+.+..+..|.+... +.+...++..++....... ...+-..|..... ......+|.++|++++++.
T Consensus 889 e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~ 963 (1495)
T PLN03232 889 EERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVS-----SSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQ 963 (1495)
T ss_pred HHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHhcccCCCCCCcchHHHHHHHHHHHH
Confidence 111122334444444444322 2211111111111111111 1222222322111 1122457888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 775 FLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAG 854 (1288)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~ 854 (1288)
.++.+++.+++.+.+.+++.++|++++++++++|++||| ++++|+++||+++|++.++..++..+..++..++.+++.
T Consensus 964 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~--~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~ 1041 (1495)
T PLN03232 964 VAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFH--TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLST 1041 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeC--cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 489999999999999999999999999999988888888
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHH
Q 000777 855 LIIAFTASWQLALIILVMLPLIGVSGYTQM---KFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKK 931 (1288)
Q Consensus 855 ~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~ 931 (1288)
++++++++|...+ +++|+.+++.+.+. +..+...+......+...+++.|++.|++|||+|+.++++.+++.+.
T Consensus 1042 ~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~ 1118 (1495)
T PLN03232 1042 FALIGTVSTISLW---AIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKS 1118 (1495)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHH
Confidence 8877777653322 22333333222222 22222333334455667899999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCc----CHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 000777 932 CEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVE-DGKA----TFSDVF-KVFFSLTMTAIGISQSSSFSSD 1005 (1288)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 1005 (1288)
.+...+..........+ ... .+..+...+.++.+...+. .+.+ .+..++ .++.+...+..++..+...+..
T Consensus 1119 ~~~~~~~~~~~~~~~~w-l~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~ 1195 (1495)
T PLN03232 1119 MDNNIRFTLANTSSNRW-LTI--RLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASK 1195 (1495)
T ss_pred HHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666554432222211 111 1111112222233333333 2332 112222 2334444555677788888889
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCC--CccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCC
Q 000777 1006 SNKAKSAAASIFAIIDRESKIDPSDES--GTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSG 1083 (1288)
Q Consensus 1006 ~~~~~~~~~ri~~~~~~~~~~~~~~~~--~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsG 1083 (1288)
.+....+.+|+.++++.+++.+...+. .++.++..|.|+|+||+|+|++. .++||+|+||+|+|||+||||||||||
T Consensus 1196 ~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSG 1274 (1495)
T PLN03232 1196 AENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAG 1274 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCC
Confidence 999999999999999876653321111 11122456889999999999643 357999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhH
Q 000777 1084 KSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHK 1163 (1288)
Q Consensus 1084 KSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~ 1163 (1288)
||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||+++. +++|+|+|+|++.+++++
T Consensus 1275 KSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~--~~sdeei~~al~~a~l~~ 1352 (1495)
T PLN03232 1275 KSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS--EHNDADLWEALERAHIKD 1352 (1495)
T ss_pred HHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC--CCCHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999873 689999999999999999
Q ss_pred HHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchh
Q 000777 1164 FICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLST 1243 (1288)
Q Consensus 1164 ~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~t 1243 (1288)
+|.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++|
T Consensus 1353 ~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~t 1432 (1495)
T PLN03232 1353 VIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNT 1432 (1495)
T ss_pred HHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhhcc
Q 000777 1244 IKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSA 1285 (1288)
Q Consensus 1244 i~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~~ 1285 (1288)
+++||||+||++|+|+|+|+|+||+++++|.|++|++.+...
T Consensus 1433 i~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1433 IIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred HHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 999999999999999999999999998668999999877543
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1e-149 Score=1512.47 Aligned_cols=1185 Identities=19% Similarity=0.220 Sum_probs=869.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 63 IGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLY 142 (1288)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~ 142 (1288)
.++++.++..++....|++++.+++.+.....+ ......+++.++++.++.+++.....+.....+.++...++..+
T Consensus 321 ~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i 397 (1522)
T TIGR00957 321 MSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAP---DWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAV 397 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555566666777889988875432111 11111122223333334444443334445667888888999999
Q ss_pred HHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000777 143 LKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSGG 222 (1288)
Q Consensus 143 ~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~~ 222 (1288)
|+|+++++..+++.. ++|+++|++++|++++..... .+..+....+.+++++++++......+++.++++++++.+..
T Consensus 398 y~K~L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~ 475 (1522)
T TIGR00957 398 YRKALVITNSARKSS-TVGEIVNLMSVDAQRFMDLAT-YINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNA 475 (1522)
T ss_pred HHHHHhCChhhcCCC-CHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999874 899999999999999988653 333333333333333333322222233444555556666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 223 VMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSY 302 (1288)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1288)
++.+..++..++.++..+++.+.+.|.++||++||+|+||+.+.+++.+.++++.+...+......+.......... .
T Consensus 476 ~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~--~ 553 (1522)
T TIGR00957 476 VMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPF--L 553 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 77888888888889999999999999999999999999999999999999988887766655554443222111111 1
Q ss_pred HHHHHHHHHHHhh--cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCC
Q 000777 303 ALSVWYGGKLILE--EGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDI 380 (1288)
Q Consensus 303 ~~~~~~g~~~v~~--~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 380 (1288)
+..+.++.+.+.. +.++.+.+++++.++..+..|+..+...+..+.++..+.+|+.++++.+++.+.........+..
T Consensus 554 ~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~ 633 (1522)
T TIGR00957 554 VALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGE 633 (1522)
T ss_pred HHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCC
Confidence 1222344555553 56888989888877777788999999999999999999999999997654321110000000111
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhc
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRK 460 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~ 460 (1288)
.+.|+++|++|+|+.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 634 ~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 699 (1522)
T TIGR00957 634 GNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG------------- 699 (1522)
T ss_pred CCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------
Confidence 2379999999999742 35799999999999999999999999999999999999999999999998
Q ss_pred ceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 461 KIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
+|+||+|+||+|++||+|||.||.+ .++++..++++.|++.+++..+|+|++|.+|++|.+|||||||||+||||+|++
T Consensus 700 ~i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~ 778 (1522)
T TIGR00957 700 SVAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSN 778 (1522)
T ss_pred EEEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999876 456777888888999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHH---hcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHH
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDR---IMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQ 617 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 617 (1288)
|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|++++.|+++++.++ ++.|.+
T Consensus 779 ~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~~~~ 857 (1522)
T TIGR00957 779 ADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR-DGAFAE 857 (1522)
T ss_pred CCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc-chhHHH
Confidence 999999999999999999999998853 4567999999999999999999999999999999999999876 677877
Q ss_pred HHHHHhhcccccccccc-ccc-chhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCC-
Q 000777 618 LIRLQEANKESEQTIDG-QRK-SEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGP- 694 (1288)
Q Consensus 618 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 694 (1288)
+...+......+...+. ... .....+.... ..............................................
T Consensus 858 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1522)
T TIGR00957 858 FLRTYAPDEQQGHLEDSWTALVSGEGKEAKLI-ENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEET 936 (1522)
T ss_pred HHHhhccccccccccccccccccccccccccc-cccccccccccchhhhhccccccccccccccccccccccccccccch
Confidence 76544321111000000 000 0000000000 0000000000000000000000000000000000000000000000
Q ss_pred CC---CCcccCCchhhHhhhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHH
Q 000777 695 SQ---PTEEVAPEVPTRRLAYLNKP-EIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLAL 770 (1288)
Q Consensus 695 ~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 770 (1288)
.. .+++..+.+.+..+.+|.+. .++..++.++..++..+......++++.+.+.... ........+|..+|+++
T Consensus 937 ~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~--~~~~~~~~~~~~iy~~l 1014 (1522)
T TIGR00957 937 WKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMV--NGTQNNTSLRLSVYGAL 1014 (1522)
T ss_pred hhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cCCCCCcchHHHHHHHH
Confidence 00 00011122233333333322 22222222222222222222333333333322110 00112234566788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000777 771 GAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNIST 850 (1288)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~ 850 (1288)
+++..++.++..++....+.++..++|++++++++++|++|||+ +++|+++||+++|++.++..++..+..++..++.
T Consensus 1015 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~ 1092 (1522)
T TIGR00957 1015 GILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFN 1092 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999999994 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHH
Q 000777 851 AAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKK 930 (1288)
Q Consensus 851 ~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~ 930 (1288)
+++.++++++.+|.++++++++++++++...++.+..+...+......+...+++.|++.|++|||+|+.++++.+++.+
T Consensus 1093 ~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~ 1172 (1522)
T TIGR00957 1093 VIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDL 1172 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHH
Confidence 99999888888887665554444444333333333333333444445567789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 931 KCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLV-EDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKA 1009 (1288)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1288)
..+...+..+.......+......++. .+++++.+...+ ..|.++.|.+..++.+...+..++..+...+...+..
T Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~ 1249 (1522)
T TIGR00957 1173 KVDENQKAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETN 1249 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998887776554444333322222221 222333444444 3578999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCC-CC-CCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHH
Q 000777 1010 KSAAASIFAIIDRESKIDPS-DE-SGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTV 1087 (1288)
Q Consensus 1010 ~~~~~ri~~~~~~~~~~~~~-~~-~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL 1087 (1288)
..+.+|+.++.+.+++.+.. +. ..+..++..|.|+|+||+|+|+++ .++||+||||+|+|||+||||||||||||||
T Consensus 1250 ~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL 1328 (1522)
T TIGR00957 1250 IVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSL 1328 (1522)
T ss_pred HHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHH
Confidence 99999999999766543211 11 111122456899999999999754 3479999999999999999999999999999
Q ss_pred HHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHh
Q 000777 1088 VSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICS 1167 (1288)
Q Consensus 1088 ~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~ 1167 (1288)
+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||++. ++++|+|+|+|++.++++++|.+
T Consensus 1329 ~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~--~~~sdeei~~al~~a~l~~~I~~ 1406 (1522)
T TIGR00957 1329 TLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPF--SQYSDEEVWWALELAHLKTFVSA 1406 (1522)
T ss_pred HHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcc--cCCCHHHHHHHHHHcCcHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999854 36899999999999999999999
Q ss_pred hhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhc
Q 000777 1168 LQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNA 1247 (1288)
Q Consensus 1168 lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~ 1247 (1288)
+|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++++.+|
T Consensus 1407 lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~ 1486 (1522)
T TIGR00957 1407 LPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDY 1486 (1522)
T ss_pred CccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHh
Q 000777 1248 DMIAVVKNGVIVEKGKHENLINIPDGFYASLIALH 1282 (1288)
Q Consensus 1248 DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~ 1282 (1288)
|||+|||+|+|+|+|+|+||+++ +|.|++|+++.
T Consensus 1487 DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1487 TRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred CEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 99999999999999999999997 79999999873
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.4e-144 Score=1454.16 Aligned_cols=1167 Identities=17% Similarity=0.193 Sum_probs=861.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 62 IIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGL 141 (1288)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~ 141 (1288)
+..+++.++..++....|++++.+++.+... .. .......+++.++++.++.+++...+.+.....+.++...+...
T Consensus 247 ~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~-~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~ 323 (1560)
T PTZ00243 247 WWQIPFKLLSDVCTLTLPVLLKYFVKFLDAD-NA--TWGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNAL 323 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-Cc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566667777777888888888764321 11 11111112222333344445555445555566677777778888
Q ss_pred HHHHHHhCChhhhhc-cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000777 142 YLKTILRQDVAFFDN-ETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMS 220 (1288)
Q Consensus 142 ~~~~ll~~~~~~f~~-~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~ 220 (1288)
+|+|+++++...+.. ..++|+++|++++|++.+.+++.. +..++...+.+++++++++.+..+.+++.++++++++.+
T Consensus 324 if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl 402 (1560)
T PTZ00243 324 IFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLPL 402 (1560)
T ss_pred HHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999998876641 137899999999999999999854 444555666666655555554444677777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 221 GGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFC 300 (1288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1288)
..++.++..+..++.++..+++.+.+.|.++|||+||+++||+.+.+++.+.++++.+...+......+...+......+
T Consensus 403 ~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l 482 (1560)
T PTZ00243 403 NGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPTL 482 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888899999999999999999999999999999999999999999888777766665544443333222
Q ss_pred HHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc----cC-C----
Q 000777 301 SYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEID----AY-D---- 371 (1288)
Q Consensus 301 ~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~----~~-~---- 371 (1288)
. ..+.++++.+..+.++++.+|+++.++..+..|+..+...+..+.++.++.+|+.++++.++... +. .
T Consensus 483 ~--~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~ 560 (1560)
T PTZ00243 483 M--IAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWRE 560 (1560)
T ss_pred H--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhccc
Confidence 2 22345667778899999999999999988899999988899999999999999999997543100 00 0
Q ss_pred ---C-C--C------------------------------------------cccCCCcccEEEEeEEEECCCC-------
Q 000777 372 ---T-K--G------------------------------------------KILDDIRGDIELRDVYFSYPAR------- 396 (1288)
Q Consensus 372 ---~-~--~------------------------------------------~~~~~~~~~i~~~~v~~~y~~~------- 396 (1288)
. . . .......+.+.++|++|+++..
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1560)
T PTZ00243 561 QREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVE 640 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccc
Confidence 0 0 0 0000011346778887765310
Q ss_pred ------------------------------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEEC
Q 000777 397 ------------------------------PNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLID 446 (1288)
Q Consensus 397 ------------------------------~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~ 446 (1288)
.++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~ 720 (1560)
T PTZ00243 641 GGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWAE 720 (1560)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC
Confidence 12458999999999999999999999999999999999999999999874
Q ss_pred CeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 447 GINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 447 g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
++|+||+|+||+|++||+|||.|+.+. +.+++.++.+.++++++++.+|+|++|.+|++|.+||||
T Consensus 721 -------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGG 786 (1560)
T PTZ00243 721 -------------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGG 786 (1560)
T ss_pred -------------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHH
Confidence 379999999999999999999998653 455677888888999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChh
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQE-ALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~ 605 (1288)
|||||+||||++++|+|||||||||+||+++.+.+.+ ++....+++|+|+|||+++.+..||+|++|++|++++.|+++
T Consensus 787 QkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~ 866 (1560)
T PTZ00243 787 QKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGSSA 866 (1560)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCHH
Confidence 9999999999999999999999999999998887765 444455689999999999999889999999999999999999
Q ss_pred HHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCccc
Q 000777 606 KLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFAD 685 (1288)
Q Consensus 606 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1288)
++++. +.|..+........+..+.....+. . ..+.... ........... ....... ....
T Consensus 867 ~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~------~~~~~~~~~~~-----~~~~~~~-----~~~~ 926 (1560)
T PTZ00243 867 DFMRT--SLYATLAAELKENKDSKEGDADAEV-A-EVDAAPG------GAVDHEPPVAK-----QEGNAEG-----GDGA 926 (1560)
T ss_pred HHHhC--hHHHHHHHhhccccccccccccccc-c-ccccccc------ccccccccccc-----ccccccc-----cccc
Confidence 99874 4566665432211110000000000 0 0000000 00000000000 0000000 0000
Q ss_pred ccCCCCCCCC-CCCcccCCchhhHhhhhhcCChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHH
Q 000777 686 TALGEPAGPS-QPTEEVAPEVPTRRLAYLNKPEI--PVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRF 762 (1288)
Q Consensus 686 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1288)
......... ..+++..+.+.+..+..|.+... ...+..++..++..++.....+++ ..|... ....+...
T Consensus 927 -~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl-----~~w~~~-~~~~~~~~ 999 (1560)
T PTZ00243 927 -ALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWL-----SMWSTR-SFKLSAAT 999 (1560)
T ss_pred -ccccccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhccc-ccCCCccc
Confidence 000000000 00011112233333333322111 111111111111111111111222 222211 11122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHH
Q 000777 763 WALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALA 842 (1288)
Q Consensus 763 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~ 842 (1288)
|+.+|+++.++..++.+++.++....+.+...++|+++|++++++|++|||+ +++|+++|||++|++.++..++..+.
T Consensus 1000 ~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~Di~~id~~l~~~l~ 1077 (1560)
T PTZ00243 1000 YLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSRDIDILDNTLPMSYL 1077 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHhhHHHHHHHHHHHHH
Confidence 6677777777777777777777777888889999999999999999999994 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 000777 843 RIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGY---TQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFC 919 (1288)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~ 919 (1288)
.++..++.+++.++++++.+|.+.++ ++|+.+++.+ .+.+..+...+......+...+++.|++.|++|||+|+
T Consensus 1078 ~~~~~~~~~i~~li~~~~~~p~~~~~---~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~ 1154 (1560)
T PTZ00243 1078 YLLQCLFSICSSILVTSASQPFVLVA---LVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYG 1154 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCc
Confidence 99999999999988888888744333 3333333322 22233333333334455667899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--HHhcCCcCHHHHHHHHHHHHHHHHHHH
Q 000777 920 AEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGAR--LVEDGKATFSDVFKVFFSLTMTAIGIS 997 (1288)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--lv~~g~~~~~~~~~~~~~~~~~~~~~~ 997 (1288)
.++.+.++|.+..+...+..+.......+......++..+...++.+++.. +...+.+++|.+..++.+...+..++.
T Consensus 1155 ~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~ 1234 (1560)
T PTZ00243 1155 KAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLN 1234 (1560)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888777665554444444444433333333333333 333455788887777777788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC-------------------------CC-Cc---cccCCCccEEEEEE
Q 000777 998 QSSSFSSDSNKAKSAAASIFAIIDRESKIDPSD-------------------------ES-GT---ILEDVKGEIELHHV 1048 (1288)
Q Consensus 998 ~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~-------------------------~~-~~---~~~~~~g~I~~~nV 1048 (1288)
.+......++..+.+.+|+.++++..++.+.+. +. .+ +.++..|.|+|+||
T Consensus 1235 ~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nV 1314 (1560)
T PTZ00243 1235 WLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGV 1314 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEE
Confidence 999999999999999999999986433211000 00 00 11124578999999
Q ss_pred EEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCC
Q 000777 1049 SFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEP 1128 (1288)
Q Consensus 1049 sf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~ 1128 (1288)
+|+|++. .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||
T Consensus 1315 sf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp 1393 (1560)
T PTZ00243 1315 QMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDP 1393 (1560)
T ss_pred EEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCC
Confidence 9999753 356999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC-CCEEEEe
Q 000777 1129 VLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD-PKILLLD 1207 (1288)
Q Consensus 1129 ~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~-p~ILlLD 1207 (1288)
+||+|||||||+++ .+++|+|||+||+.++++++|.++|+||||.|||+|.+|||||||||||||||+++ |+|||||
T Consensus 1394 ~LF~gTIreNIdp~--~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLD 1471 (1560)
T PTZ00243 1394 VLFDGTVRQNVDPF--LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMD 1471 (1560)
T ss_pred ccccccHHHHhCcc--cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 99999999999875 37899999999999999999999999999999999999999999999999999996 8999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhh
Q 000777 1208 EATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHS 1283 (1288)
Q Consensus 1208 EaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~ 1283 (1288)
||||+||++||+.|+++|++.+++||+|+||||++++++||+|+||++|+|+|+|+|+||+++++|.|++|++.+.
T Consensus 1472 EATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1472 EATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred CCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999877899999998764
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.7e-141 Score=1421.75 Aligned_cols=1176 Identities=17% Similarity=0.222 Sum_probs=833.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 68 AIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTIL 147 (1288)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 147 (1288)
.++..++....|++++.+++.+...... .......+++.++++.++..++.....+.....+.++-..+...+|+|++
T Consensus 89 ~~~~~~~~~~~P~ll~~li~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 89 LYFGEATKAVQPLLLGRIIASYDPFNAP--EREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455556677888888875321111 01111122223333344444555445555555666666666667799999
Q ss_pred hCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 148 RQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSGGVMAIM 227 (1288)
Q Consensus 148 ~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~~~~~~~ 227 (1288)
+++...+++. ++|+++|++++|++.+.+.+..... +....+.+++++++++....+.+++.++++++++.+..++.++
T Consensus 167 ~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~~~-~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 167 KLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALAHF-VWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred hCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999864 8999999999999999998765433 3333443444444444434445677777888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 228 ISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYALSVW 307 (1288)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (1288)
+.+..++.++..+++.+.+.|.++|||+||+|+||+.+.+++.+.++.+.+...+......+...+..+.. ..+.++.
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 322 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSG--FFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 99999999999999999999999999999999999999999999999998887777665544333222222 2233445
Q ss_pred HHHHHHhhcCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCcccEEE
Q 000777 308 YGGKLILEEGYNGGQVVNVMVAVLTGSMSLG-EASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIRGDIEL 386 (1288)
Q Consensus 308 ~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 386 (1288)
++++.+.. .++.+.+|+++.++..+..++. .+...+..+.++.++.+|+.++++.++..+. . . ......+++
T Consensus 323 f~~y~~~~-~~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~-~---~--~~~~~~i~~ 395 (1490)
T TIGR01271 323 VVPYALIK-GIILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTL-E---Y--NLTTTEVEM 395 (1490)
T ss_pred HHHHHHhC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc-c---c--cCCCCceEE
Confidence 55665554 4678888888877766666764 5666788899999999999999976443111 1 0 011235999
Q ss_pred EeEEEECCCCC-------------------------------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcC
Q 000777 387 RDVYFSYPARP-------------------------------NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERF 435 (1288)
Q Consensus 387 ~~v~~~y~~~~-------------------------------~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~ 435 (1288)
+|++|.|+... .+++|+|+||+|++|++++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999995310 13689999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCcccc
Q 000777 436 YDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTL 515 (1288)
Q Consensus 436 ~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 515 (1288)
++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.++..++++.|++.+++..+|+|++|.
T Consensus 476 ~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~ 541 (1490)
T TIGR01271 476 LEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTV 541 (1490)
T ss_pred CCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccccc
Confidence 999999999998 6999999999999999999999865 44556777788888999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCceEEEEecCchhhhhcCEEEEEe
Q 000777 516 VGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQE-ALDRIMVNRTTVIVAHRLSTVRNADMIAVIH 594 (1288)
Q Consensus 516 ~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 594 (1288)
+|++|.+|||||||||+||||+|++|+|+|||||||+||+++++.+.+ ++.++.+++|+|+|||+++.+..||+|++|+
T Consensus 542 vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~ 621 (1490)
T TIGR01271 542 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLH 621 (1490)
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 4677778899999999999998899999999
Q ss_pred CCEEeEecChhHHhcCCCchHHHHHHHHhhcccc--ccc--cccc------ccchhh----hhhhhccccccccc-cccc
Q 000777 595 RGKIVEKGTHSKLVEDPEGAYSQLIRLQEANKES--EQT--IDGQ------RKSEIS----MESLRHSSHRMSLR-RSIS 659 (1288)
Q Consensus 595 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~------~~~~~~----~~~~~~~~~~~~~~-~~~~ 659 (1288)
+|++++.|+++++.+. ++.|...+.......+. +.. ...+ ...+.. .+............ ....
T Consensus 622 ~g~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1490)
T TIGR01271 622 EGVCYFYGTFSELQAK-RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKR 700 (1490)
T ss_pred CCEEEEEcCHHHHHhc-ChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999875 45565554311100000 000 0000 000000 00000000000000 0000
Q ss_pred CCC---C-C-C------------C----CCCccc-c---------ccc-----CCCCCC------------c-------c
Q 000777 660 RGS---S-I-G------------N----SSRHSI-S---------VSF-----GLPSGQ------------F-------A 684 (1288)
Q Consensus 660 ~~~---~-~-~------------~----~~~~~~-~---------~~~-----~~~~~~------------~-------~ 684 (1288)
... . . . . ...... . ... ..+..+ . .
T Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1490)
T TIGR01271 701 KQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMT 780 (1490)
T ss_pred cccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccc
Confidence 000 0 0 0 0 000000 0 000 000000 0 0
Q ss_pred cc--c------------------------CCCC----C-CCCC-----C--------------CcccCCchhhHhhhhhc
Q 000777 685 DT--A------------------------LGEP----A-GPSQ-----P--------------TEEVAPEVPTRRLAYLN 714 (1288)
Q Consensus 685 ~~--~------------------------~~~~----~-~~~~-----~--------------~~~~~~~~~~~~~~~~~ 714 (1288)
.. . ...+ . ..+. + ++...+.+.+..+..|.
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~ 860 (1490)
T TIGR01271 781 HSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYI 860 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHH
Confidence 00 0 0000 0 0000 0 00001122233333332
Q ss_pred CCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-CC--Ccc-c---------hhchHHH-HHHHHHHHHHHHH
Q 000777 715 KPE--IPVILAGTIAAMANGVILPIYGLLISSVIET--FF-KP--PHE-L---------KKDSRFW-ALIYLALGAGSFL 776 (1288)
Q Consensus 715 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~--~~~-~---------~~~~~~~-~~~~~~l~~~~~~ 776 (1288)
+.. +..+++.++..++..+...+..+++..+... .+ .. ... . .....+| +.+|++++++..+
T Consensus 861 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1490)
T TIGR01271 861 TTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLA 940 (1490)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHH
Confidence 211 1111111111111112222222222211110 00 00 000 0 0011223 3445555555667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 777 LSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLI 856 (1288)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 856 (1288)
+.+++.+++.+.+.+.+.++|.+++++++++|++||++ +++|+++|||++|++.++..++..+..++..++.+++.++
T Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~ 1018 (1490)
T TIGR01271 941 LGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIF 1018 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888899999999999999999999999999999995 8999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHH
Q 000777 857 IAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPM 936 (1288)
Q Consensus 857 ~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~ 936 (1288)
++++++|++++++++++.++++...++.+..+...+......+...+++.|++.|+.|||+|+.++++.++|.+..+...
T Consensus 1019 ~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~ 1098 (1490)
T TIGR01271 1019 VVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHT 1098 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 99998887655333322222222222222233333333445566789999999999999999999999999999998765
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH--HHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 937 KTGIRQGMVSGGGFGASFFLLFAFYA--ASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAA 1014 (1288)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1288)
+..+.......+......++..+... +.++++.. .++.|.+..++.+...+..++..+...+..++..+.+.+
T Consensus 1099 ~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~e 1173 (1490)
T TIGR01271 1099 ANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVS 1173 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54443332222221111111111111 11122222 223333333344445555667777778888999999999
Q ss_pred HHHHHhcccCCCCCCCC----------------CCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEc
Q 000777 1015 SIFAIIDRESKIDPSDE----------------SGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVG 1078 (1288)
Q Consensus 1015 ri~~~~~~~~~~~~~~~----------------~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG 1078 (1288)
|+.++.+.+++.....+ ..++.++..|.|+|+||+|+|++. .++||+||||+|+|||+|||||
T Consensus 1174 Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvG 1252 (1490)
T TIGR01271 1174 RVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLG 1252 (1490)
T ss_pred HHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEEC
Confidence 99999976654321110 001112356889999999999753 4689999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHH
Q 000777 1079 ESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEM 1158 (1288)
Q Consensus 1079 ~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~ 1158 (1288)
|||||||||+++|+|+|+ ++|+|+|||+||++++++.+|++|+||||||+||+||||+||++. .+++|+++|+||+.
T Consensus 1253 rSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~--~~~tdeei~~aL~~ 1329 (1490)
T TIGR01271 1253 RTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPY--EQWSDEEIWKVAEE 1329 (1490)
T ss_pred CCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcc--cCCCHHHHHHHHHH
Confidence 999999999999999997 799999999999999999999999999999999999999999865 36899999999999
Q ss_pred hchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEe
Q 000777 1159 ANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVA 1238 (1288)
Q Consensus 1159 a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~Ia 1238 (1288)
++++++|.++|+||||+|||+|.+||||||||||||||||++|+|||||||||+||++||+.|++.|++.+++||||+||
T Consensus 1330 ~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~Ia 1409 (1490)
T TIGR01271 1330 VGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSE 1409 (1490)
T ss_pred CCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhh
Q 000777 1239 HRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHS 1283 (1288)
Q Consensus 1239 Hrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~ 1283 (1288)
||++++.+||||+||++|+|+|+|+|++|+++ +|.|++|++.+.
T Consensus 1410 HRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1410 HRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAAD 1453 (1490)
T ss_pred cCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhC
Confidence 99999999999999999999999999999985 899999998764
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.8e-110 Score=975.15 Aligned_cols=574 Identities=38% Similarity=0.618 Sum_probs=540.7
Q ss_pred hhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 706 PTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFF 785 (1288)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 785 (1288)
.+++++.+.+++++++..+.++.++......+.+.+.+.+++.++.. .+......-....+.++.++.+++.+++.+++
T Consensus 134 ~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~-~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~ 212 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEG-DDSADALKRACTILLGLFLIGALANAIRGGLL 212 (716)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788899999999999999988888888888888899999888761 11112222334566677788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000777 786 AVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQL 865 (1288)
Q Consensus 786 ~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 865 (1288)
..+++++..++|..+|+++++++++|||. |.+|++++|+++|...+.+.++.++...+.+++..++++++|+++||.+
T Consensus 213 ~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~L 290 (716)
T KOG0058|consen 213 QYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRL 290 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHH
Confidence 99999999999999999999999999995 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 866 ALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMV 945 (1288)
Q Consensus 866 ~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1288)
+++.++.+|++.++..++.++.++.+++.+...++++....|.+.+++|||+|+.|++..++|.+..++..+...|....
T Consensus 291 tlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a 370 (716)
T KOG0058|consen 291 TLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVA 370 (716)
T ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000777 946 SGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESK 1025 (1288)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~ 1025 (1288)
.+.+++...+........++++|++++..|.+|.|++..++++...+..++..+..++.++.++..+.+|++++++++|.
T Consensus 371 ~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~ 450 (716)
T KOG0058|consen 371 YGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPR 450 (716)
T ss_pred hhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEEC
Q 000777 1026 IDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLD 1105 (1288)
Q Consensus 1026 ~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id 1105 (1288)
.++. ....+ ....|.|+|+||+|+||.+|+.|||+|+||+|+|||+||+||||||||||+++||+|||+|++|+|++|
T Consensus 451 i~~~-G~~~p-~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllD 528 (716)
T KOG0058|consen 451 IPLT-GTLAP-DHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLD 528 (716)
T ss_pred CCCC-Ccccc-ccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEEC
Confidence 7654 22121 257899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCCh
Q 000777 1106 GVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1106 G~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
|+||++++..+||++||+|.|||+||++||+|||.||.+ .+++|||.+|+++|++||||.++|+||||.|||+|.+|||
T Consensus 529 G~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~-~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 529 GVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLD-NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCC-CCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 999999999999999999999999999999999999964 8999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChh
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
||||||||||||+|||+||||||||||||+++|..||++|.+..+++|||+|||||+||++||+|+|+++|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcHHHHHHHHhhcc
Q 000777 1266 NLINIPDGFYASLIALHSSA 1285 (1288)
Q Consensus 1266 eLl~~~~g~y~~L~~~~~~~ 1285 (1288)
||+++++|.|++|+++|...
T Consensus 688 eLl~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 688 ELLSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred HHhhCcccHHHHHHHHhccc
Confidence 99999889999999998644
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-106 Score=945.15 Aligned_cols=575 Identities=39% Similarity=0.644 Sum_probs=540.7
Q ss_pred CccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000777 43 SVPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFL 122 (1288)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 122 (1288)
...+++++.|+++.++ ++..+.++.++......+.|.+.|+++|...... .....+...+..+.++.++++++.++
T Consensus 132 ~~~~~rl~~l~~~~~~-~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~---~~~~~~~~~~~~l~~l~~~~a~~~~~ 207 (716)
T KOG0058|consen 132 HTLLKRLLGLLKPEWK-WLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGD---DSADALKRACTILLGLFLIGALANAI 207 (716)
T ss_pred hhHHHHHHHHhchhHH-HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999987644 5667777777777778889999999999876411 12344556677788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 123 QVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIK 202 (1288)
Q Consensus 123 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 202 (1288)
+.+++.++++++..++|..+|+++++++++|||.+ ++|+++||+++|+..+.+.++..+...+.++.+.++++++|+++
T Consensus 208 r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~ 286 (716)
T KOG0058|consen 208 RGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSL 286 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhh
Confidence 99999999999999999999999999999999985 99999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 000777 203 GWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQ 282 (1288)
Q Consensus 203 ~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 282 (1288)
+|.|++++++.+|+++++..+++++.++..++.|++.++++.+.+|.+++|||||+|+.|+.+.+||.+..++..+...|
T Consensus 287 S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k 366 (716)
T KOG0058|consen 287 SWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKK 366 (716)
T ss_pred hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000777 283 EGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETIN 362 (1288)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 362 (1288)
.....+.+.+...+...+....++++|++++.+|.++.|.+.+|++|......++..+...+..++++..|++|+||++|
T Consensus 367 ~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~d 446 (716)
T KOG0058|consen 367 EAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMD 446 (716)
T ss_pred HHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 000777 363 RKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGE 442 (1288)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 442 (1288)
.+|.++... ...+....|.|+|+||+|+||.+|+.+||+|+||+|+|||+||+|||||+||||++++|.++|+|++|+
T Consensus 447 r~P~i~~~G--~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~ 524 (716)
T KOG0058|consen 447 RKPRIPLTG--TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGR 524 (716)
T ss_pred cCCCCCCCC--ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCe
Confidence 999877542 122225789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCC
Q 000777 443 VLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQ 522 (1288)
Q Consensus 443 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 522 (1288)
|.+||+||+++++.++|++||+|.|||.||++||+|||.||.++.++++++.|++++++|+||..+|+||||.|||+|.+
T Consensus 525 IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~q 604 (716)
T KOG0058|consen 525 ILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQ 604 (716)
T ss_pred EEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 523 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 523 LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
|||||||||||||||++||.||||||+|||||+++|..++++|.++.+++|||+|+|||+++++||+|+|+++|+++|.|
T Consensus 605 LSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G 684 (716)
T KOG0058|consen 605 LSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMG 684 (716)
T ss_pred ccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCchHHHHHHHHhh
Q 000777 603 THSKLVEDPEGAYSQLIRLQEA 624 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~~~~~~ 624 (1288)
+|+||++.+++.|.++++.|..
T Consensus 685 ~h~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 685 THDELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred cHHHHhhCcccHHHHHHHHhcc
Confidence 9999999988999999987754
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-99 Score=936.76 Aligned_cols=579 Identities=46% Similarity=0.782 Sum_probs=546.5
Q ss_pred CCccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 000777 42 ESVPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASF 121 (1288)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 121 (1288)
.+.++++++++.+| ++..++++++++++.|+..|+..++++.++..|... +.+........+++++++++++.+++.+
T Consensus 648 ~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~-~~~~~~~~~~~~al~f~~l~~~~~i~~~ 725 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPP-DDDELKREVRAWALIFLGLGIVSGITNF 725 (1228)
T ss_pred ccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999987 677889999999999999999999999999988643 2222222333478889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 122 LQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFI 201 (1288)
Q Consensus 122 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 201 (1288)
++++++.+.|+++..|+|..+|+++++++++|||...++|.|.+|+.+|...++..+.+.+..+++++..++.+++++|+
T Consensus 726 ~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~ 805 (1228)
T KOG0055|consen 726 LQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFI 805 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997666699999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 000777 202 KGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGV 281 (1288)
Q Consensus 202 ~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 281 (1288)
++|++++++++..|++++......+++.....+..+.+.+......|++.+||||++|+.|+++.+.|.+..+...+...
T Consensus 806 ~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~ 885 (1228)
T KOG0055|consen 806 YGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSF 885 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000777 282 QEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETI 361 (1288)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l 361 (1288)
+...+.++..++.+.+.++.+++.+|+|++++.+|.+++.+++.++..+......+++.....+.+.+|..|+.++|+++
T Consensus 886 ~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~ 965 (1228)
T KOG0055|consen 886 KRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEIL 965 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred ccCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCc
Q 000777 362 NRKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAG 441 (1288)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 441 (1288)
+++|.++..++.+...+..+|+|+++||+|+||++|+.+||+|+||+|++||++||||||||||||++.+|.|+|+|++|
T Consensus 966 dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G 1045 (1228)
T KOG0055|consen 966 DRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAG 1045 (1228)
T ss_pred cCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 99998776554444456678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCC
Q 000777 442 EVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGT 521 (1288)
Q Consensus 442 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 521 (1288)
.|.|||+|++++++++||++||.|.|+|.||++||||||+||.+..+.+++.+|++.+++|+||.+||+||||.+||+|.
T Consensus 1046 ~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~ 1125 (1228)
T KOG0055|consen 1046 KVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGV 1125 (1228)
T ss_pred eEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccC
Confidence 99999999999999999999999999999999999999999966689999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEe
Q 000777 522 QLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEK 601 (1288)
Q Consensus 522 ~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 601 (1288)
+||||||||||||||++|||+||||||+|||||.++|+.+|++|++.+.+||+|+|+|||+++++||.|+|+++|+|+|+
T Consensus 1126 QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~ 1205 (1228)
T KOG0055|consen 1126 QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQ 1205 (1228)
T ss_pred cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhcCCCchHHHHHHHHh
Q 000777 602 GTHSKLVEDPEGAYSQLIRLQE 623 (1288)
Q Consensus 602 g~~~~l~~~~~~~~~~~~~~~~ 623 (1288)
|+|++|++. +|.|.+|++.|.
T Consensus 1206 GtH~~L~~~-~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1206 GTHDELLAK-RGIYFRLVQLQS 1226 (1228)
T ss_pred ccHHHHHhC-CCchHHHhhhcc
Confidence 999999995 899999987664
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.7e-94 Score=882.04 Aligned_cols=568 Identities=32% Similarity=0.468 Sum_probs=519.6
Q ss_pred hHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 707 TRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFA 786 (1288)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 786 (1288)
..+++....++++.+.-.++.+++..++..+.+++...++|.+.... ...........+++++++..++.+++.+++.
T Consensus 142 ~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~--~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 142 LSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDA--SRSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred hHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555556666666666666666666667777777777765321 1222333445566677788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000777 787 VAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLA 866 (1288)
Q Consensus 787 ~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 866 (1288)
+++.++..++-.++|+|++++|++||.+ +++|++++|+. |++.++.+++......+.++.++++.++++++++|+++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~--r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~ 296 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEK--RSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLT 296 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccC--CChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999985 89999999985 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 867 LIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVS 946 (1288)
Q Consensus 867 lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1288)
+++++.+|++++..++..+++++..++.....++..+.+.|++.|++|||+.+.|.++..+|++...+..+...+.....
T Consensus 297 li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~ 376 (709)
T COG2274 297 LIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLA 376 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000777 947 GGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKI 1026 (1288)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1026 (1288)
.....+..++..+..++++|+|+++|.+|.+|+|+++++.+....+..|+.++.+++.++++...+.+|+.++++.+++.
T Consensus 377 ~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~ 456 (709)
T COG2274 377 LILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQ 456 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred CCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECC
Q 000777 1027 DPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDG 1106 (1288)
Q Consensus 1027 ~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG 1106 (1288)
+.+.. ....+...|+|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++||
T Consensus 457 ~~~~~-~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg 534 (709)
T COG2274 457 EGDKT-LIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDG 534 (709)
T ss_pred ccccc-cccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 43221 12345578999999999999855 45799999999999999999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1107 VEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1107 ~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
+|+.++++..+|++|+|||||++||+|||||||+++. +++++|++++||+.+++|+||.++|+||||+|||+|.+||||
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~-p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGG 613 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGN-PEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGG 613 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCC-CCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHH
Confidence 9999999999999999999999999999999999984 588999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhh
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|||||+|||||++||+||||||||||||++||+.|.+.|.+..++||+|+||||++++++||||+|||+|+|+|+|+|+|
T Consensus 614 QrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~e 693 (709)
T COG2274 614 QRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEE 693 (709)
T ss_pred HHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcHHHHHHHHhh
Q 000777 1267 LINIPDGFYASLIALHS 1283 (1288)
Q Consensus 1267 Ll~~~~g~y~~L~~~~~ 1283 (1288)
|++. +|.|++++++|.
T Consensus 694 ll~~-~g~y~~l~~~q~ 709 (709)
T COG2274 694 LLAQ-GGLYARLYQQQE 709 (709)
T ss_pred HHHh-cChHHHHHhccC
Confidence 9997 999999998873
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.1e-90 Score=846.44 Aligned_cols=568 Identities=31% Similarity=0.486 Sum_probs=520.0
Q ss_pred cHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 45 PFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQV 124 (1288)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 124 (1288)
.+..++....+++. .+.-.++.+++.++...+.|++...++|...... ..+.+....+.++++++..+++.+++.
T Consensus 141 ~~~~f~~~~~~~~~-~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~----~~~tL~vl~ig~~~~~l~~~~l~~lr~ 215 (709)
T COG2274 141 GLSWFIPLLFKYRR-LLFEVLLASLLLQLLALATPLFSQIVIDKVLPDA----SRSTLTVLAIGLLLAALFEALLRLLRT 215 (709)
T ss_pred chHhHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC----chhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444433333 3334444555666666677778888999876442 234566677778888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 125 TCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGW 204 (1288)
Q Consensus 125 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1288)
++..+.+.|+...+-.++++|++++|++||+++ ++|++++|+. |.+.|+++++..+...+..+..+++.+++|++++|
T Consensus 216 ~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~ 293 (709)
T COG2274 216 YLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSW 293 (709)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999986 9999999995 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 205 LLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEG 284 (1288)
Q Consensus 205 ~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 284 (1288)
.+++++++.+|++++...++.+.+++..++.....++.++++.|+++|+++||+.+.|.++..+|++...+..+...+..
T Consensus 294 ~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~ 373 (709)
T COG2274 294 KLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTE 373 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 000777 285 LAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRK 364 (1288)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 364 (1288)
........+..++..++.++++|+|+++|.+|.+|.|.++++.+....+..|+..+...+..++.+..+.+|+.++++.+
T Consensus 374 ~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~ 453 (709)
T COG2274 374 KLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTP 453 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999888889999999999999999999999999999999999888889999999999999999999999999999998
Q ss_pred CCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 000777 365 PEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVL 444 (1288)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~ 444 (1288)
+|.+... .....+...|+|+++||+|+|+.+ ++++|+|+||+|++||++||||+||||||||+|+|.|+|+|++|+|+
T Consensus 454 ~E~~~~~-~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~ 531 (709)
T COG2274 454 PEQEGDK-TLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRIL 531 (709)
T ss_pred ccccccc-ccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 8754322 123456667999999999999754 35799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCC
Q 000777 445 IDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLS 524 (1288)
Q Consensus 445 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 524 (1288)
+||.|++++++..+|++||||+||+.||+|||+|||+++.|+.+++++.+||+.+++++||.++|.||+|.+||+|.+||
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LS 611 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLS 611 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecCh
Q 000777 525 GGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 525 gGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 604 (1288)
||||||++|||||+++|+||||||||||||+++|+.|.+.|.++.+++|+|+||||++++++||||+||++|+|+++|+|
T Consensus 612 GGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~ 691 (709)
T COG2274 612 GGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSH 691 (709)
T ss_pred HHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhcCCCchHHHHHHHH
Q 000777 605 SKLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 605 ~~l~~~~~~~~~~~~~~~ 622 (1288)
+|+++. +|.|.++++.|
T Consensus 692 ~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 692 EELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred HHHHHh-cChHHHHHhcc
Confidence 999998 89999988654
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.6e-86 Score=826.45 Aligned_cols=554 Identities=37% Similarity=0.583 Sum_probs=494.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 717 EIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRI 796 (1288)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 796 (1288)
.+ .+..+.+..++...+....+++++.+++.... .......+..+++++.++..++.++..++..+.+.+...++
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l 87 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA----DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADL 87 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 55556666666666666677777777776651 11122233444555566777888888888888899999999
Q ss_pred HHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000777 797 RSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLI 876 (1288)
Q Consensus 797 r~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~ 876 (1288)
|.++|+++++.|++||++ ++.|++++|+++|++.++..+......+...++.+++.+++++..+|.+++++++..|++
T Consensus 88 r~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~ 165 (567)
T COG1132 88 RRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLL 165 (567)
T ss_pred HHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999999995 789999999999999999999998666666788889999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000777 877 GVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFL 956 (1288)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1288)
.+...+..++.++..+..++..++..+.+.|.+.|+++||+|+.++...+++.+..+...+...+..............+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (567)
T COG1132 166 ALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLL 245 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777766778888888889999999999999999999999999999999999988888888777777777888888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccc
Q 000777 957 LFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTIL 1036 (1288)
Q Consensus 957 ~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~ 1036 (1288)
..+...+.+++|..++..+.+++|.+..++.+......++..+.........+..+.+|++++++.+++....+.. .
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~ 322 (567)
T COG1132 246 SSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---L 322 (567)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---C
Confidence 8888999999999999999999999999999999999999999999999999999999999999986653322211 2
Q ss_pred cCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH
Q 000777 1037 EDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW 1116 (1288)
Q Consensus 1037 ~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~ 1116 (1288)
....++|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+||++++.++
T Consensus 323 ~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~ 400 (567)
T COG1132 323 KDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDS 400 (567)
T ss_pred CCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHH
Confidence 234577999999999974 357999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1117 LRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1117 lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
||++|++|||||+||+|||+|||++|. ++++|||+++|++.|+++|||.++|+||||.|||+|.+||||||||||||||
T Consensus 401 lr~~I~~V~Qd~~LF~~TI~~NI~~g~-~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARa 479 (567)
T COG1132 401 LRKRIGIVSQDPLLFSGTIRENIALGR-PDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARA 479 (567)
T ss_pred HHHhccEEcccceeecccHHHHHhcCC-CCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999999999995 4699999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHH
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYA 1276 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~ 1276 (1288)
++++|||||||||||+||++||+.|++++++..++||+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|+
T Consensus 480 ll~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~ 558 (567)
T COG1132 480 LLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYA 558 (567)
T ss_pred HhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHH
Confidence 99999999999999999999999999999988889999999999999999999999999999999999999997 99999
Q ss_pred HHHHHhhc
Q 000777 1277 SLIALHSS 1284 (1288)
Q Consensus 1277 ~L~~~~~~ 1284 (1288)
+||+.|..
T Consensus 559 ~l~~~~~~ 566 (567)
T COG1132 559 RLYQAQGG 566 (567)
T ss_pred HHHHHhhc
Confidence 99998864
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.6e-86 Score=829.12 Aligned_cols=569 Identities=23% Similarity=0.302 Sum_probs=484.3
Q ss_pred hHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 707 TRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFA 786 (1288)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 786 (1288)
+++++.+.+++++.++.+++.+++...+....++++..+++.+...... ......+..+++++.++..++.+++.++..
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP-REALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677788888888888888888888888888888888865421111 111223344455566677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000777 787 VAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLA 866 (1288)
Q Consensus 787 ~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 866 (1288)
+.+.++..++|.++|++++++|++||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|+++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 166 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAG 166 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 488999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 867 LIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVS 946 (1288)
Q Consensus 867 lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1288)
+++++++|+.+++.....+..++..++..+..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....
T Consensus 167 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK11174 167 LILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMA 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877777777778888888899999999999999999999999999999999998888877776665
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 947 GGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDV---------FKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIF 1017 (1288)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~ 1017 (1288)
.....+...+..+...++.++++..+ .|.+++|.+ +.++.+...+..|+..+..+.....++..+.+|+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~ 325 (588)
T PRK11174 247 FLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLV 325 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444444444444434434444333 377777653 22223444566789999999999999999999999
Q ss_pred HHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC
Q 000777 1018 AIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP 1097 (1288)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p 1097 (1288)
++++.+++.+... ....+....+.|+|+||+|.|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+| |
T Consensus 326 ~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p 401 (588)
T PRK11174 326 TFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P 401 (588)
T ss_pred HHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C
Confidence 9998654322111 10111112457999999998863 357999999999999999999999999999999999999 9
Q ss_pred CCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhcccccccc
Q 000777 1098 DAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVG 1177 (1288)
Q Consensus 1098 ~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vg 1177 (1288)
++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+|. ++++|||+++|++.+++++||.++|+||||.||
T Consensus 402 ~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~-~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vg 480 (588)
T PRK11174 402 YQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGN-PDASDEQLQQALENAWVSEFLPLLPQGLDTPIG 480 (588)
T ss_pred CCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCC-CCCCHHHHHHHHHHhCHHHHHHhcccccccccc
Confidence 9999999999999999999999999999999999999999999984 479999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCE
Q 000777 1178 ERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGV 1257 (1288)
Q Consensus 1178 e~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1257 (1288)
|+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++++||+|+||++|+
T Consensus 481 e~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 481 DQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred EEEecChhhhhcCCCcHHHHHHHHhhcc
Q 000777 1258 IVEKGKHENLINIPDGFYASLIALHSSA 1285 (1288)
Q Consensus 1258 Ive~Gt~~eLl~~~~g~y~~L~~~~~~~ 1285 (1288)
|+|.|+|+||+++ +|.|+++++.|.+.
T Consensus 561 i~e~G~~~eL~~~-~~~y~~l~~~q~~~ 587 (588)
T PRK11174 561 IVQQGDYAELSQA-GGLFATLLAHRQEE 587 (588)
T ss_pred EeecCCHHHHHhc-chHHHHHHHHhhcC
Confidence 9999999999996 89999999988753
No 16
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.7e-85 Score=754.24 Aligned_cols=552 Identities=28% Similarity=0.399 Sum_probs=494.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 724 GTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEK 803 (1288)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 803 (1288)
..+.+++.++......++++..+..++... .......+...++++.+++.++.+.+..+..+++.++...+|..++++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~--~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQ--LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666777777888777776432 123344556677778888999999999999999999999999999999
Q ss_pred HHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000777 804 VIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQ 883 (1288)
Q Consensus 804 ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~ 883 (1288)
+.+.++.|-. ..++|+..+.+...++.++.++..+++.++.+.+..+..++.+++++|.-++++++++|++.+++++.
T Consensus 83 l~~~gp~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 83 LAKLGPAFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHhCChhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 48899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000777 884 MKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAA 963 (1288)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1288)
....+..+++....+...++++.+.++|+.|+|.|+..+...++..+..++..+..++..+......++..++.++..++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888777777766666776666655
Q ss_pred H-HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCcc
Q 000777 964 S-FYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGE 1042 (1288)
Q Consensus 964 ~-~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 1042 (1288)
+ +++|..++..|.+++...+.++.....+..|+..++++++....+..+.+.++.+.+.+.+..+.............+
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~e 320 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIE 320 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCce
Confidence 4 455556555589999998888888999999999999999999999999999999998776543322211112223345
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
++++|++|+||+. +++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.||++++
T Consensus 321 i~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 321 ISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred eeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 6677999999864 37999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCC
Q 000777 1123 LVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPK 1202 (1288)
Q Consensus 1123 ~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ 1202 (1288)
||||+|++|+|||||||.+++ ++.+|+++++|++.+++.+|+.. |+|+||++||+|.+|||||+||+++||||+++++
T Consensus 399 ~v~Q~p~lf~gTireNi~l~~-~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 399 WVSQNPYLFAGTIRENILLAR-PDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeCCCCccccccHHHHhhccC-CcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999985 47999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHh
Q 000777 1203 ILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALH 1282 (1288)
Q Consensus 1203 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~ 1282 (1288)
++|||||||+||.|||+.|++.|.+.++++|||+||||++.+++||+|+|||+|+++|.|+|++|.++ +|.|++|+.+|
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q 555 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQ 555 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 89999999988
Q ss_pred hc
Q 000777 1283 SS 1284 (1288)
Q Consensus 1283 ~~ 1284 (1288)
..
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 64
No 17
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.8e-85 Score=830.83 Aligned_cols=564 Identities=34% Similarity=0.495 Sum_probs=500.4
Q ss_pred hhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 706 PTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFF 785 (1288)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 785 (1288)
..++++.+.++.++.+...++..++..+.....++++..+++.+....+ .........+++++.++..++.+++.+++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 225 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG--PPALASAIFFMCLLSIASSVSAGLRGGSF 225 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666777777777777777777777777888888888887653211 11111223344455566778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000777 786 AVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQL 865 (1288)
Q Consensus 786 ~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 865 (1288)
.+++.++..++|.++|++++++|++||++ +++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+
T Consensus 226 ~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l 303 (711)
T TIGR00958 226 NYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRL 303 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999994 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 866 ALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMV 945 (1288)
Q Consensus 866 ~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1288)
++++++.+|+.+++.++..++.++..++.++..++..+.+.|+++|+++||+|+.|+++.++|.+..++..+...+....
T Consensus 304 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 383 (711)
T TIGR00958 304 TMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALA 383 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888888889999999999999999999999999999999999998888877777
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000777 946 SGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESK 1025 (1288)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~ 1025 (1288)
..........+..+..++++++|.+++..|.+++|.++++..+...+..++..+.......+++..+.+|++++++.+++
T Consensus 384 ~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 463 (711)
T TIGR00958 384 YAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPN 463 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 66666666677777777888999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEEC
Q 000777 1026 IDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLD 1105 (1288)
Q Consensus 1026 ~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id 1105 (1288)
.+.... ..+.+..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++|
T Consensus 464 ~~~~~~--~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~id 541 (711)
T TIGR00958 464 IPLTGT--LAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLD 541 (711)
T ss_pred CCCCCC--CCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEEC
Confidence 332111 112234578999999999986655689999999999999999999999999999999999999999999999
Q ss_pred CeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCCh
Q 000777 1106 GVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1106 G~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
|+|+++++.+++|++|+||||||++|+|||||||.++. ++++|+++++|++.+++++++.++|+||||.+||+|.+|||
T Consensus 542 g~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~-~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 542 GVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGL-TDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCC-CCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 99999999999999999999999999999999999984 46899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChh
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
|||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||+++++.||+|+||++|+|+|.|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999999 3345789999999999999999999999999999999999
Q ss_pred hhhcCCCcHHHHHH
Q 000777 1266 NLINIPDGFYASLI 1279 (1288)
Q Consensus 1266 eLl~~~~g~y~~L~ 1279 (1288)
||+++ +|.|++|+
T Consensus 699 eL~~~-~~~y~~lv 711 (711)
T TIGR00958 699 QLMED-QGCYKHLV 711 (711)
T ss_pred HHHhC-CCchHhcC
Confidence 99997 78999874
No 18
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.8e-84 Score=811.50 Aligned_cols=568 Identities=22% Similarity=0.296 Sum_probs=483.8
Q ss_pred cHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 45 PFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQV 124 (1288)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 124 (1288)
.++++++|.+++++ .+++++++.++..++.+..|++++.++|...... . ....+..++..++++.++.+++.+++.
T Consensus 9 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (588)
T PRK11174 9 LTRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIEN-I--PREALLPPFILLILLFVLRALLAWLRE 84 (588)
T ss_pred hhHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--chhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667888877654 4566777788888888899999999999754211 1 112233334445556677888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 125 TCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGW 204 (1288)
Q Consensus 125 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1288)
++....+.++..++|.++++|++++|+++|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 85 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 163 (588)
T PRK11174 85 RVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINW 163 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999975 9999999999999999999998899999898888989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 205 LLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEG 284 (1288)
Q Consensus 205 ~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 284 (1288)
.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..
T Consensus 164 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 243 (588)
T PRK11174 164 AAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVL 243 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888888889999999999999999999999999999999999998888887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 285 LAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQV---------VNVMVAVLTGSMSLGEASPCLSAFGAGQAAAF 355 (1288)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 355 (1288)
........+..++..+..++++++++..+ .|.++.|.+ +.++.+......|+..+...+..+..+..+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ 322 (588)
T PRK11174 244 RMAFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAE 322 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555555544444444444555443 377777754 11122334456788888888999999999999
Q ss_pred HHHHHhccCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcC
Q 000777 356 KMFETINRKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERF 435 (1288)
Q Consensus 356 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~ 435 (1288)
|+.++++.+++.+... ....+....+.|+++||+|.|++ ++++|+|+||+|+||+++|||||||||||||+++|+|+
T Consensus 323 ri~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~ 399 (588)
T PRK11174 323 SLVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGF 399 (588)
T ss_pred HHHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 9999998755322111 10111112357999999987753 35799999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCcccc
Q 000777 436 YDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTL 515 (1288)
Q Consensus 436 ~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 515 (1288)
| |++|+|++||+|+++++.+++|++|+||||+|+||++||+|||++|.|++++++++++++.++++++++++|+||||.
T Consensus 400 ~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~ 478 (588)
T PRK11174 400 L-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTP 478 (588)
T ss_pred C-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccc
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeC
Q 000777 516 VGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHR 595 (1288)
Q Consensus 516 ~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 595 (1288)
+||+|.+|||||||||+||||++++|+|||||||||+||+++++.+++.|+++.+++|+|+||||+++++.||+|++|++
T Consensus 479 vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~ 558 (588)
T PRK11174 479 IGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQD 558 (588)
T ss_pred cccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred CEEeEecChhHHhcCCCchHHHHHHHHh
Q 000777 596 GKIVEKGTHSKLVEDPEGAYSQLIRLQE 623 (1288)
Q Consensus 596 G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 623 (1288)
|+++++|+|+||+++ ++.|++++..|.
T Consensus 559 G~i~e~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 559 GQIVQQGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred CeEeecCCHHHHHhc-chHHHHHHHHhh
Confidence 999999999999987 789999987654
No 19
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.2e-84 Score=824.71 Aligned_cols=555 Identities=26% Similarity=0.328 Sum_probs=495.3
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 714 NKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLI 793 (1288)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 793 (1288)
.++.++.+...++.+++..++....++++..+++.+....+ ......+.+.++++.++..++.+++.++..+++.++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (686)
T TIGR03797 131 LRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD--RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMD 208 (686)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666777777777777788888877653211 1112223444555666778889999999999999999
Q ss_pred HHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000777 794 QRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVML 873 (1288)
Q Consensus 794 ~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~ 873 (1288)
.++|.++|++++++|++||+. +++|++++|++ |++.++..+...+...+..++.++++++++++++|++++++++++
T Consensus 209 ~~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 285 (686)
T TIGR03797 209 ASLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALA 285 (686)
T ss_pred HHHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999984 88999999997 799999999998888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000777 874 PLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGAS 953 (1288)
Q Consensus 874 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1288)
|+.+++.++..+..++..++..+...+..+.+.|+++|+++||+++.|+++.++|.+..++..+...+..........+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (686)
T TIGR03797 286 LVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFN 365 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888888888888888888888999999999999999999999999999999999999999999888888877788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 000777 954 FFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESG 1033 (1288)
Q Consensus 954 ~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 1033 (1288)
.++..+..++++++|++++..|.+|+|.++++..+...+..|+..+......++.+..+.+|+.++++.+++.+...
T Consensus 366 ~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~--- 442 (686)
T TIGR03797 366 AVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK--- 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc---
Confidence 88888888899999999999999999999999999999999999999999999999999999999988655432111
Q ss_pred ccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC
Q 000777 1034 TILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ 1113 (1288)
Q Consensus 1034 ~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~ 1113 (1288)
..+....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++
T Consensus 443 ~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 521 (686)
T TIGR03797 443 TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLD 521 (686)
T ss_pred CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCC
Confidence 1112245689999999999743 457999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1114 LKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
.+++|++|+||||||++|+|||||||.++. + ++++++++|++.+++++++.++|+||||++||+|.+|||||||||+|
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~-~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRial 599 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMSGSIFENIAGGA-P-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLI 599 (686)
T ss_pred HHHHHhccEEEccCCccCcccHHHHHhcCC-C-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999984 3 89999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCc
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDG 1273 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g 1273 (1288)
||||+++|+|||||||||+||++||+.|++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||+++ +|
T Consensus 600 ARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~ 676 (686)
T TIGR03797 600 ARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EG 676 (686)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-Cc
Confidence 99999999999999999999999999999999986 6899999999999999999999999999999999999996 89
Q ss_pred HHHHHHHHh
Q 000777 1274 FYASLIALH 1282 (1288)
Q Consensus 1274 ~y~~L~~~~ 1282 (1288)
.|++|++.|
T Consensus 677 ~y~~l~~~q 685 (686)
T TIGR03797 677 LFAQLARRQ 685 (686)
T ss_pred HHHHHHHhc
Confidence 999999876
No 20
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1e-83 Score=824.09 Aligned_cols=564 Identities=25% Similarity=0.376 Sum_probs=499.2
Q ss_pred hHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 707 TRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFA 786 (1288)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 786 (1288)
+++++.+.++.++.+...++.+++..++....++++..+++.+.... .......+.+.++++.++..++.+++.++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK--MMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555666666666666677777777777888888888765321 1111222333444555667788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000777 787 VAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLA 866 (1288)
Q Consensus 787 ~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 866 (1288)
+++.++..++|.++|++++++|++||++ +++|++++|++ |.+.+...+...+...+..++.++++++++++++|+++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 298 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLF 298 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999994 89999999998 89999999988888888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 867 LIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVS 946 (1288)
Q Consensus 867 lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1288)
+++++++|+++++.+...+..++..++.....++..+.+.|+++|+++||++|.|+.+.++|.+...+..+...+.....
T Consensus 299 li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (708)
T TIGR01193 299 LLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKAD 378 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888899999999999999999999999999999999999999988888888777
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000777 947 GGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKI 1026 (1288)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1026 (1288)
.....+..++..+..++++++|++++..|.+|+|.++++..+...+..|+..+......++.+..+.+|+.++++.+++.
T Consensus 379 ~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 458 (708)
T TIGR01193 379 QGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEF 458 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 77777777777778888899999999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECC
Q 000777 1027 DPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDG 1106 (1288)
Q Consensus 1027 ~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG 1106 (1288)
+..... ...+...+.|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||
T Consensus 459 ~~~~~~-~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 459 INKKKR-TELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred cccccc-cCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 221110 112234578999999999973 35799999999999999999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1107 VEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1107 ~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
+|+++++.+++|++|+||||||+||+|||||||.++..++++++++++|++.++++++|.++|+||||.+||+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 99999999999999999999999999999999999843478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhh
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||+++++.||+|+||++|+++|.|+|+|
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~ 694 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDE 694 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999999985 7899999999999999999999999999999999999
Q ss_pred hhcCCCcHHHHHHH
Q 000777 1267 LINIPDGFYASLIA 1280 (1288)
Q Consensus 1267 Ll~~~~g~y~~L~~ 1280 (1288)
|+++ +|.|++|++
T Consensus 695 L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 695 LLDR-NGFYASLIH 707 (708)
T ss_pred HHhc-CCcHHHHhh
Confidence 9996 899999985
No 21
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.8e-83 Score=855.53 Aligned_cols=570 Identities=29% Similarity=0.466 Sum_probs=489.0
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 46 FYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVT 125 (1288)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 125 (1288)
+.+++++..++.+ .++++++++++.+++.|+.|++++.+++.+.... ........+.+++++++++.+++.+++.+
T Consensus 813 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~l~~~~~~i~~~~~~~l~~~ 888 (1466)
T PTZ00265 813 LRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDFA---NLEANSNKYSLYILVIAIAMFISETLKNY 888 (1466)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555544433 3567777888999999999999999999765321 11122344566677788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhc-cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 126 CWMITGERQATRIRGLYLKTILRQDVAFFDN-ETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGW 204 (1288)
Q Consensus 126 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~-~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1288)
+..+.++++..++|.++|++++++|++|||+ +.++|++++|+++|++.++..+...+..++..++.++++++++++++|
T Consensus 889 ~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~ 968 (1466)
T PTZ00265 889 YNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCP 968 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999985 237999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Q 000777 205 LLTLVMLSSIPLLAMSGGVMAIMISKMS-SR-----------------GQGAYAKAASVVEQTIGSIRTVASFTGEKQAM 266 (1288)
Q Consensus 205 ~l~l~~~~~~p~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~ 266 (1288)
.+++++++++|++ ...+.++.+... .+ .++..++.+..++|+++|+++||+|+.|+.+.
T Consensus 969 ~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~ 1045 (1466)
T PTZ00265 969 IVAAVLTGTYFIF---MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFC 1045 (1466)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHH
Confidence 9887765444333 333333222211 11 12345677899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 267 SNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSA 346 (1288)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (1288)
++|.+..+...+...+.....++..++..++..+..++++|+|++++..|.+++|.+++++.+++....++..+...+..
T Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~ 1125 (1466)
T PTZ00265 1046 NLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGD 1125 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888888888889999999999999999999998876666555667788888999
Q ss_pred HHHHHHHHHHHHHHhccCCCCccCCCCCcc---cCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCC
Q 000777 347 FGAGQAAAFKMFETINRKPEIDAYDTKGKI---LDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGS 423 (1288)
Q Consensus 347 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGs 423 (1288)
+..+.++++|++++++.+++.+..+..+.. ++...+.|+|+||+|+||++++.++|+|+||+|++|+++||||||||
T Consensus 1126 ~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGs 1205 (1466)
T PTZ00265 1126 SENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGS 1205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCC
Confidence 999999999999999877654321111111 12345789999999999866566899999999999999999999999
Q ss_pred cHHHHHHHHHcCCCC------------------------------------------------------CCcEEEECCee
Q 000777 424 GKSTVISLIERFYDP------------------------------------------------------QAGEVLIDGIN 449 (1288)
Q Consensus 424 GKSTl~~~l~g~~~~------------------------------------------------------~~G~i~~~g~~ 449 (1288)
|||||+++|+|+|+| ++|+|++||+|
T Consensus 1206 GKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~d 1285 (1466)
T PTZ00265 1206 GKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVD 1285 (1466)
T ss_pred CHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEE
Confidence 999999999999999 69999999999
Q ss_pred CCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000777 450 LKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 450 ~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 529 (1288)
+++++.+++|++||||+|+|+||++||||||.+|.|+++++++++|++.+++++||.+||+||||.|||+|.+|||||||
T Consensus 1286 i~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQ 1365 (1466)
T PTZ00265 1286 ICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQ 1365 (1466)
T ss_pred HHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeC----CEEe-Eec
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRNADMIAVIHR----GKIV-EKG 602 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~----G~i~-~~g 602 (1288)
||||||||+++|+|||||||||+||+++|+.|+++|+++. +++|+|+||||+++++.||+|+||++ |+++ |+|
T Consensus 1366 RIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~G 1445 (1466)
T PTZ00265 1366 RIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHG 1445 (1466)
T ss_pred HHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEec
Confidence 9999999999999999999999999999999999999984 68999999999999999999999999 9955 899
Q ss_pred ChhHHhcCCCchHHHHHHHH
Q 000777 603 THSKLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~~~~ 622 (1288)
+|+||++..++.|+++++.+
T Consensus 1446 th~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1446 THEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred CHHHHHhcCCChHHHHHhhc
Confidence 99999984479999998754
No 22
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.5e-83 Score=820.20 Aligned_cols=563 Identities=24% Similarity=0.309 Sum_probs=496.4
Q ss_pred hHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 707 TRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFA 786 (1288)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 786 (1288)
+++++.+.++.++.+...++.+++..++....++++..+++....... ......+...++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR--QDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555666666666666666666666677777777776553211 111122334445556667888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000777 787 VAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLA 866 (1288)
Q Consensus 787 ~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 866 (1288)
.++.++..+++.++|++++++|++||++ +++|++++|++.| +.++.++...+..++.+++.++++++++++++|+++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 296 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLT 296 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999984 8999999999988 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 867 LIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVS 946 (1288)
Q Consensus 867 lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1288)
+++++++|+.+++.++..+...+..++..+...+..+.+.|.+.|+++||+++.|+.+.++|.+...+..+...+.....
T Consensus 297 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (710)
T TIGR03796 297 LIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLT 376 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888887788888888899999999999999999999999999999999999998888888888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000777 947 GGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKI 1026 (1288)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1026 (1288)
.....+..++..+..++++++|++++..|.+++|.++++..+...+..|+..+......+..+..+.+|+.++++.+++.
T Consensus 377 ~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~ 456 (710)
T TIGR03796 377 QILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDP 456 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 87777888888888888999999999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCC----CCCccc-cCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCce
Q 000777 1027 DPSD----ESGTIL-EDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGH 1101 (1288)
Q Consensus 1027 ~~~~----~~~~~~-~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~ 1101 (1288)
+... .....+ +...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 535 (710)
T TIGR03796 457 LLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGE 535 (710)
T ss_pred ccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Confidence 2211 000111 2345789999999999853 457999999999999999999999999999999999999999999
Q ss_pred EEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCC
Q 000777 1102 ITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGL 1181 (1288)
Q Consensus 1102 I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~ 1181 (1288)
|++||+|+++++.+++|++|+||||||.+|+|||||||.++. ++++++++++|++.+++++++.++|+||||.+||+|.
T Consensus 536 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~-~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 536 ILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWD-PTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCC-CCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 999999999999999999999999999999999999999874 4789999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000777 1182 QLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEK 1261 (1288)
Q Consensus 1182 ~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~ 1261 (1288)
+|||||||||||||||+++|+|||||||||+||++||+.|.+.|++ .++|+|+||||+++++.||||+||++|+|+|.
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~ 692 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQR 692 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999999999999987 58999999999999999999999999999999
Q ss_pred cChhhhhcCCCcHHHHHH
Q 000777 1262 GKHENLINIPDGFYASLI 1279 (1288)
Q Consensus 1262 Gt~~eLl~~~~g~y~~L~ 1279 (1288)
|+|+||+++ +|.|++|+
T Consensus 693 G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 693 GTHEELWAV-GGAYARLI 709 (710)
T ss_pred cCHHHHHHc-CCcHHHHh
Confidence 999999996 89999987
No 23
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-82 Score=791.61 Aligned_cols=564 Identities=23% Similarity=0.287 Sum_probs=484.5
Q ss_pred hhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc--chhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 709 RLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHE--LKKDSRFWALIYLALGAGSFLLSPAQSYFFA 786 (1288)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 786 (1288)
+++++.+++++.+..+++.+++..+.....+++++.+++........ ......++...+.+++++..++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667676677766666666666667777777654321110 0000111222344455677888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000777 787 VAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLA 866 (1288)
Q Consensus 787 ~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 866 (1288)
+.+.++..++|.++|++++++|+.||++ +++|++++|+++|++.++.++...++.++..++.+++.++++++++|+++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999994 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 867 LIILVMLPLIGV-SGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMV 945 (1288)
Q Consensus 867 lv~l~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1288)
+++++++|++++ ..++..+..++..++.++..++..+.+.|.+.|+++||+|+.++++.++|.+..++..+...+....
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888887654 4566667777777788888889999999999999999999999999999999999999999988888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000777 946 SGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTM-TAIGISQSSSFSSDSNKAKSAAASIFAIIDRES 1024 (1288)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~ 1024 (1288)
......+..++..+..++++++|.+++ .|.+++|.+++++.+... ...++..+........++..+.+|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 877777777777777778888898884 789999998887666543 345777778888899999999999999998765
Q ss_pred CCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEE
Q 000777 1025 KIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITL 1104 (1288)
Q Consensus 1025 ~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~i 1104 (1288)
+.+.+... ......+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 323 ~~~~~~~~--~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 323 EVTFPTTS--TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCCCccc--CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 43211111 111234679999999999753 347999999999999999999999999999999999999999999999
Q ss_pred CCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1105 DGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1105 dG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
||+|+++++.+++|++|+||||||++|++||+|||.++. ++++|+++++|++.+++++++.+ |+||||.+||+|.+||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~-~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LS 477 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAA-PNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLS 477 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCC-CccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCC
Confidence 999999999999999999999999999999999999984 47899999999999999999999 9999999999999999
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecCh
Q 000777 1185 GGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKH 1264 (1288)
Q Consensus 1185 gGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~ 1264 (1288)
||||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|
T Consensus 478 gGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 478 GGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hhhhcCCCcHHHHHHHH
Q 000777 1265 ENLINIPDGFYASLIAL 1281 (1288)
Q Consensus 1265 ~eLl~~~~g~y~~L~~~ 1281 (1288)
+||+++ +|.|++|++.
T Consensus 558 ~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 558 QELLAQ-QGRYYQLKQR 573 (574)
T ss_pred HHHHhc-CcHHHHHHhh
Confidence 999997 8999999863
No 24
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.5e-82 Score=808.66 Aligned_cols=564 Identities=36% Similarity=0.556 Sum_probs=499.1
Q ss_pred ccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 44 VPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQ 123 (1288)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 123 (1288)
..+++++++.++.+. .++.++++.++..++....|++.+.++|......+ .......+++++++.++..++.+++
T Consensus 147 ~~~~~l~~~~~~~~~-~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (711)
T TIGR00958 147 DLLFRLLGLSGRDWP-WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG----PPALASAIFFMCLLSIASSVSAGLR 221 (711)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678888775443 45667777788888888899999999998753322 1223333444555666778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000777 124 VTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKG 203 (1288)
Q Consensus 124 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1288)
.+++.+.+.++..++|.+++++++++|++||++. ++|++++|+++|++.+++.+...+..++..+..+++.+++++.++
T Consensus 222 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s 300 (711)
T TIGR00958 222 GGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLS 300 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999975 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 000777 204 WLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQE 283 (1288)
Q Consensus 204 ~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 283 (1288)
|.+++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.|+.|+.+.++|.+..++..+...+.
T Consensus 301 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 380 (711)
T TIGR00958 301 PRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRK 380 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888877776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000777 284 GLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINR 363 (1288)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 363 (1288)
....+.......++..+..++++++|++++.+|.++.|.+++++.+......|+..+...+..++++..+.+|++++++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~ 460 (711)
T TIGR00958 381 ALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDR 460 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66666555555555666667778899999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 000777 364 KPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEV 443 (1288)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i 443 (1288)
+++.+... ...+.+..+.|+++||+|+||+++++++|+|+||+|+|||+++||||||||||||+++|.|+|+|++|+|
T Consensus 461 ~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I 538 (711)
T TIGR00958 461 KPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV 538 (711)
T ss_pred CCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 76543221 1122234568999999999986555789999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCC
Q 000777 444 LIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQL 523 (1288)
Q Consensus 444 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 523 (1288)
.+||+|+++++.+++|++|+||+|+|++|++||||||.+|.++.++++++++++.++++++++++|+|+||.+||+|.+|
T Consensus 539 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 618 (711)
T TIGR00958 539 LLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQL 618 (711)
T ss_pred EECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcC
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecC
Q 000777 524 SGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 524 SgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 603 (1288)
||||||||+||||++++|+|||||||||+||+++++.+++ ....+++|+|+||||++++..||+|++|++|+|+++|+
T Consensus 619 SGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 619 SGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 9999999999999999999999999999999999999998 33346899999999999999999999999999999999
Q ss_pred hhHHhcCCCchHHHH
Q 000777 604 HSKLVEDPEGAYSQL 618 (1288)
Q Consensus 604 ~~~l~~~~~~~~~~~ 618 (1288)
|+||+++ ++.|+++
T Consensus 697 ~~eL~~~-~~~y~~l 710 (711)
T TIGR00958 697 HKQLMED-QGCYKHL 710 (711)
T ss_pred HHHHHhC-CCchHhc
Confidence 9999987 6788765
No 25
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-86 Score=725.34 Aligned_cols=508 Identities=32% Similarity=0.453 Sum_probs=433.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 773 GSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAA 852 (1288)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~ 852 (1288)
+..+++.++.++...+.+-..+++..++|+|+..+++.|+-. +.+|+++.-+++..+.+. ++.....++...+.-+.
T Consensus 271 gsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~ 347 (790)
T KOG0056|consen 271 GSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLG 347 (790)
T ss_pred cccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhh
Confidence 346777888888889999999999999999999999999874 789999988888777766 66666666666655555
Q ss_pred HHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHH
Q 000777 853 AGLIIA-FTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKK 931 (1288)
Q Consensus 853 ~~~~~~-~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~ 931 (1288)
++++.. ..++|+.+++++++..+.+.......--..+..+++.....+....-.+++-+.+|+|-|++|++..++|.++
T Consensus 348 va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreA 427 (790)
T KOG0056|consen 348 VAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREA 427 (790)
T ss_pred hhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHH
Confidence 555543 3578999999988877776654433333344455566666667777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 932 CEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKS 1011 (1288)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1288)
..++.+...+....-.........+..+..++.-.+..+++..+..++|+++.+..++....+|+...+.+....++...
T Consensus 428 il~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfi 507 (790)
T KOG0056|consen 428 ILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFI 507 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhh
Confidence 99988776654333222222222333333333334455667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000777 1012 AAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLL 1091 (1288)
Q Consensus 1012 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL 1091 (1288)
.+++++++++++++..+.+.. ++....+|.|+|+||+|.|+ |++|||+||||+++||+++|+|||||+||||++++|
T Consensus 508 DmEnmfdllkee~eVvd~P~a-~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlL 584 (790)
T KOG0056|consen 508 DMENMFDLLKEEPEVVDLPGA-PPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLL 584 (790)
T ss_pred hHHHHHHHhhcCchhhcCCCC-CCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHH
Confidence 999999999988775432221 22233678999999999996 467899999999999999999999999999999999
Q ss_pred hccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhcc
Q 000777 1092 QRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQG 1171 (1288)
Q Consensus 1092 ~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~G 1171 (1288)
+||||.++|+|+|||+||+.+..++||++||+||||.+||++||..||.|++ +.+++||+.+|++.|++||-|..+|+|
T Consensus 585 fRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak-~~AsneevyaAAkAA~IHdrIl~fPeg 663 (790)
T KOG0056|consen 585 FRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAK-PSASNEEVYAAAKAAQIHDRILQFPEG 663 (790)
T ss_pred HHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecC-CCCChHHHHHHHHHhhHHHHHhcCchh
Confidence 9999999999999999999999999999999999999999999999999995 489999999999999999999999999
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEE
Q 000777 1172 YDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIA 1251 (1288)
Q Consensus 1172 ldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~ 1251 (1288)
|+|.|||+|-.||||||||+||||++|++|.|++|||||||||..||+.||.+|.+...+||.|+|||||+||-+||.|+
T Consensus 664 Y~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~IL 743 (790)
T KOG0056|consen 664 YNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLIL 743 (790)
T ss_pred hhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCEEEEecChhhhhcCCCcHHHHHHH-HhhcccC
Q 000777 1252 VVKNGVIVEKGKHENLINIPDGFYASLIA-LHSSAST 1287 (1288)
Q Consensus 1252 vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~-~~~~~~~ 1287 (1288)
|+++|+|+|.|+|+||+++.+|.|++||+ +|...++
T Consensus 744 vi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa~g~t 780 (790)
T KOG0056|consen 744 VISNGRIVERGRHEELLKRDGGAYADMWQAQQAMGKT 780 (790)
T ss_pred EEeCCeEeecCcHHHHHhccCCcHHHHHHHHHhcCcc
Confidence 99999999999999999988999999995 5555444
No 26
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.4e-82 Score=790.68 Aligned_cols=561 Identities=34% Similarity=0.588 Sum_probs=501.4
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 47 YKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTC 126 (1288)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 126 (1288)
++++++.+ .+ .+..+.++.++........|++++.++|.+.. .......+...++++.++..++.++..++
T Consensus 5 ~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 75 (567)
T COG1132 5 RRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA------DLGELLELLLLLLLLALLGGVLRALQSYL 75 (567)
T ss_pred HHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444 33 45566666667777777888888888887651 11223344445556666778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000777 127 WMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLL 206 (1288)
Q Consensus 127 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 206 (1288)
..+.+.++..++|..++++++++|+++|++. ++|++++|+++|++.++..+......+...+..+++.+++++..+|.+
T Consensus 76 ~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (567)
T COG1132 76 GSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRL 154 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 8888899999999999999999999999975 899999999999999999998886666657888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 207 TLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLA 286 (1288)
Q Consensus 207 ~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1288)
++++++.+|++.+...++.++.++..++.++..++.++.+.|.++|++++|+|+.++.+.+++.+..+...+...+....
T Consensus 155 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (567)
T COG1132 155 ALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRL 234 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888778888889999999999999999999999999999999999999888888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 000777 287 AGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPE 366 (1288)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~ 366 (1288)
.+...++...+..+...+++++|..++..+.++.|.+++++.+......|+..+...+..+..+..+++|++++++.+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 314 (567)
T COG1132 235 EALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPE 314 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 77777888888888888999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEEC
Q 000777 367 IDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLID 446 (1288)
Q Consensus 367 ~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~ 446 (1288)
..+.... .....+.|+|+||+|+|++ ++++|+|+||+++|||++|||||||||||||+++|.|+|+|++|+|++|
T Consensus 315 ~~~~~~~---~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~id 389 (567)
T COG1132 315 VEDPPDP---LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILID 389 (567)
T ss_pred ccCCCCC---CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEEC
Confidence 4332211 2334577999999999973 4679999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 447 GINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 447 g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
|+|+++++.+++|++|+||||+|+||++||+|||.+|.|++++++++++++.++++++++++|+||||.+||+|.+||||
T Consensus 390 g~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgG 469 (567)
T COG1132 390 GIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGG 469 (567)
T ss_pred CEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhH
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~ 606 (1288)
||||+|||||++++|+|||||||||+||+++|+.+++.+.++.++||+|+||||++++++||+|+||++|+|+|.|+|+|
T Consensus 470 QrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~e 549 (567)
T COG1132 470 QRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEE 549 (567)
T ss_pred HHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHH
Confidence 99999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred HhcCCCchHHHHHHHHh
Q 000777 607 LVEDPEGAYSQLIRLQE 623 (1288)
Q Consensus 607 l~~~~~~~~~~~~~~~~ 623 (1288)
|+++ ++.|+++++.+.
T Consensus 550 Ll~~-~g~y~~l~~~~~ 565 (567)
T COG1132 550 LLAK-GGLYARLYQAQG 565 (567)
T ss_pred HHHc-CCHHHHHHHHhh
Confidence 9998 899999997764
No 27
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.5e-82 Score=792.67 Aligned_cols=565 Identities=34% Similarity=0.503 Sum_probs=491.6
Q ss_pred hhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 710 LAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAG 789 (1288)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 789 (1288)
++.+.++.++.+...++..++..+.....++++..+++..+.... .....+....++++.++..++.+++.++..+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD--RSVLKWMPLVVIGLMILRGITSFISSYCISWVS 93 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445555544455455554545555666666665442110 111111222334456667788888889999999
Q ss_pred HHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000777 790 NKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALII 869 (1288)
Q Consensus 790 ~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~ 869 (1288)
.++..++|..+|+++++.|.++|++ ..+|++++|+++|++.+...+...+..++..++.+++.++++++++|++++++
T Consensus 94 ~~~~~~lr~~~~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 171 (582)
T PRK11176 94 GKVVMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLIL 171 (582)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999984 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 870 LVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGG 949 (1288)
Q Consensus 870 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1288)
++++|+.+++.+...+..++..++.++...+..+.+.|.++|+++||+++.++.+.++|.+..++..+...+........
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T PRK11176 172 IVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSIS 251 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889888888888888888788888888899999999999999999999999999999999999999988888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000777 950 FGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPS 1029 (1288)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 1029 (1288)
..+..++..+...+++++|++++..|.+++|.+++++.+...+..|+..+......++.+..+.+|+.++++.+++.+..
T Consensus 252 ~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 331 (582)
T PRK11176 252 DPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG 331 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC
Confidence 77777777777888889999999999999999999998888899999999999999999999999999998765432211
Q ss_pred CCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeec
Q 000777 1030 DESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEI 1109 (1288)
Q Consensus 1030 ~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di 1109 (1288)
. ...++..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 332 ~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i 407 (582)
T PRK11176 332 K---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDL 407 (582)
T ss_pred C---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEh
Confidence 1 1112234579999999999754 45799999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1110 QKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1110 ~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
++++.+++|++|+||||||++|+|||||||.++.+++++|++++++++.+++++++.++|+||||.+||+|.+|||||||
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQ 487 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQ 487 (582)
T ss_pred hhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999999854458999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhc
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
||+|||||+++|+|||||||||+||++||+.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|++
T Consensus 488 Ri~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 488 RIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred HHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHhh
Q 000777 1270 IPDGFYASLIALHS 1283 (1288)
Q Consensus 1270 ~~~g~y~~L~~~~~ 1283 (1288)
+ ++.|++|++.|.
T Consensus 568 ~-~~~y~~l~~~~~ 580 (582)
T PRK11176 568 Q-NGVYAQLHKMQF 580 (582)
T ss_pred C-CChHHHHHHHHh
Confidence 7 799999998764
No 28
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=8.4e-82 Score=804.59 Aligned_cols=554 Identities=28% Similarity=0.410 Sum_probs=489.3
Q ss_pred HhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 708 RRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAV 787 (1288)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 787 (1288)
++++.+.++.++.+...++.+++..++....++++..+++......+ ......+...++++.++..++.+++.++..+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 136 HWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA--FETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445566666666666666666667777777888876553211 1111223334444556678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000777 788 AGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLAL 867 (1288)
Q Consensus 788 ~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 867 (1288)
.+.++..++|..+|+|++++|++| + ++++|++++|+ +|++.++.++...+...+..++.+++.++++++++|++++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 289 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVW 289 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999998 4 47899999999 7999999999998888888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 868 IILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSG 947 (1288)
Q Consensus 868 v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1288)
++++++|+++++.+...+..++..++..+...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+......
T Consensus 290 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR03375 290 VPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSN 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888999999999999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000777 948 GGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKID 1027 (1288)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 1027 (1288)
....+...+..+..++++++|++++..|.+|+|.++++..+...+..|+..+......+.....+.+|+.++++.+++.+
T Consensus 370 ~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 449 (694)
T TIGR03375 370 LATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERP 449 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88778888888888888999999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCe
Q 000777 1028 PSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGV 1107 (1288)
Q Consensus 1028 ~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1107 (1288)
... .....+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 450 ~~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 527 (694)
T TIGR03375 450 EGT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGV 527 (694)
T ss_pred CCC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 211 111112345689999999999753 457999999999999999999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1108 EIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1108 di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
|+++++++++|++|+||||||++|+|||+|||.++. ++++++++++|++.+++++++.++|+||||.+||+|.+|||||
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~-~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGA-PYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCC-CCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 999999999999999999999999999999999984 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhh
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||||+|||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+|+|.|+|+||
T Consensus 607 rQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 607 RQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred hcC
Q 000777 1268 INI 1270 (1288)
Q Consensus 1268 l~~ 1270 (1288)
+++
T Consensus 687 l~~ 689 (694)
T TIGR03375 687 LEA 689 (694)
T ss_pred HHH
Confidence 875
No 29
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5e-81 Score=796.43 Aligned_cols=563 Identities=27% Similarity=0.358 Sum_probs=497.9
Q ss_pred ccHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000777 44 VPFYKLFTF-ADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFL 122 (1288)
Q Consensus 44 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 122 (1288)
..+++++++ .++.+ ..+...+++.++..++....|++++.++|.+..... .+.+...++.++++.++.+++.++
T Consensus 121 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~ 195 (686)
T TIGR03797 121 LGLRDLLRFALRGAR-RDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD----RSLLVQIALALLAAAVGAAAFQLA 195 (686)
T ss_pred ccHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 446666666 33333 334555566667777777888899999998753221 233444555566667778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 123 QVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIK 202 (1288)
Q Consensus 123 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 202 (1288)
+.++....+.++..++|..+++|++++|++||+++ ++|++++|++ |++.+++.+...+...+..+..+++.+++++++
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (686)
T TIGR03797 196 QSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYY 273 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999975 9999999997 899999999888777777777778888999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 000777 203 GWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQ 282 (1288)
Q Consensus 203 ~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 282 (1288)
+|++++++++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||+++.|+.+.++|.+...+..+...+
T Consensus 274 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 353 (686)
T TIGR03797 274 SWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELS 353 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888898888899999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000777 283 EGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETIN 362 (1288)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 362 (1288)
......+...+..++..+..++++++|++++.+|.++.|.++++..++.....|+..+...+..++.+..+.+|+.++++
T Consensus 354 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 433 (686)
T TIGR03797 354 AQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILE 433 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88887777777777777778888999999999999999999999998888899999999999999999999999999998
Q ss_pred cCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 000777 363 RKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGE 442 (1288)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 442 (1288)
.+++.+... ..+....+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+
T Consensus 434 ~~~e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 509 (686)
T TIGR03797 434 ALPEVDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGS 509 (686)
T ss_pred CCcccccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCE
Confidence 765532211 1122234689999999999643 467999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCC
Q 000777 443 VLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQ 522 (1288)
Q Consensus 443 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 522 (1288)
|++||+|+++++.+++|++||||||+|++|++||+|||.++.| .++++++++++.++++++++++|+|+||.+||+|.+
T Consensus 510 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~ 588 (686)
T TIGR03797 510 VFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGT 588 (686)
T ss_pred EEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCC
Confidence 9999999999999999999999999999999999999999988 899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 523 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 523 LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
|||||||||+||||++++|+|||||||||+||+++++.+.+.|+++ ++|+|+||||+++++.||+|++|++|+|+++|
T Consensus 589 LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G 666 (686)
T TIGR03797 589 LSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQG 666 (686)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999999999999887 58999999999999999999999999999999
Q ss_pred ChhHHhcCCCchHHHHHHH
Q 000777 603 THSKLVEDPEGAYSQLIRL 621 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~~~ 621 (1288)
+|+|++++ ++.|++++..
T Consensus 667 ~~~~Ll~~-~~~y~~l~~~ 684 (686)
T TIGR03797 667 TYDELMAR-EGLFAQLARR 684 (686)
T ss_pred CHHHHHhC-CcHHHHHHHh
Confidence 99999986 7899988764
No 30
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.4e-81 Score=786.35 Aligned_cols=562 Identities=26% Similarity=0.347 Sum_probs=476.7
Q ss_pred hhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 710 LAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAG 789 (1288)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 789 (1288)
+..+.+++++.+...++.+++..++....++++..+++..+............+.++++++.++..++.+++.++...++
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (592)
T PRK10790 14 LLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAA 93 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666666666667777777777888888888665321110000111223344455567778888999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000777 790 NKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALII 869 (1288)
Q Consensus 790 ~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~ 869 (1288)
.++..++|.++|+++++.|++||+. ++.|++++|+++|++.++..+...+..++..+..+++.++++++++|++++++
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~ 171 (592)
T PRK10790 94 VGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVA 171 (592)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999984 88999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 870 LVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGG 949 (1288)
Q Consensus 870 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1288)
++++|+.++...+..+..+...++..+...+..+.+.|.+.|+++||+|+.++++.++|.+..++..+...+........
T Consensus 172 l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (592)
T PRK10790 172 IMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFL 251 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777777777777777777778888999999999999999999999999999998888777766655544332
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000777 950 -FGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDP 1028 (1288)
Q Consensus 950 -~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 1028 (1288)
..+..++..+...+++++++. +..|.+++|.++++..+...+..|+..+......+++...+.+|+.++++.+++...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 252 LRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 222222222222222222333 578999999999999999999999999999999999999999999999876543211
Q ss_pred CCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCee
Q 000777 1029 SDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVE 1108 (1288)
Q Consensus 1029 ~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d 1108 (1288)
. ...+...+.|+|+||+|+|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||.|
T Consensus 331 ~----~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~ 404 (592)
T PRK10790 331 N----DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRP 404 (592)
T ss_pred C----CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEE
Confidence 1 111223467999999999974 3479999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1109 IQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1109 i~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
+++++++.+|++|+||||||.+|+|||||||+++. +++|+++++|++.+|+++++.++|+||||.+||+|.+||||||
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~--~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqr 482 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR--DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQK 482 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccchHHHHHHhCC--CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHH
Confidence 99999999999999999999999999999999984 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|||||||||+++|+|||||||||+||++||+.|.+.|++..++||+|+||||+++++.||+|++|++|+++|.|+|+||+
T Consensus 483 QRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~ 562 (592)
T PRK10790 483 QLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLL 562 (592)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHhh
Q 000777 1269 NIPDGFYASLIALHS 1283 (1288)
Q Consensus 1269 ~~~~g~y~~L~~~~~ 1283 (1288)
++ ++.|+++++.|.
T Consensus 563 ~~-~~~y~~l~~~~~ 576 (592)
T PRK10790 563 AA-QGRYWQMYQLQL 576 (592)
T ss_pred hC-CCHHHHHHHHHh
Confidence 97 899999998774
No 31
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-81 Score=711.91 Aligned_cols=505 Identities=27% Similarity=0.342 Sum_probs=448.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000777 769 ALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNI 848 (1288)
Q Consensus 769 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~ 848 (1288)
++++++.+..+......+.+..++..++|.++|+++...+..-..+ ..+|+++||+..|++.+|+.+-..+.+.+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r--~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR--YRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh--cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 4677888899999999999999999999999999999999887774 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHH
Q 000777 849 STAAAGLIIAFTASWQLALIILVML-PLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQL 927 (1288)
Q Consensus 849 ~~~~~~~~~~~~~~~~l~lv~l~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~ 927 (1288)
+..++..+.+.+++|++++.+..++ .+++++++...++.++..+......+...+++.+.+.|....+.||+++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 9999888888899999988776554 455677888888989889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000777 928 YKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSS-SFSSDS 1006 (1288)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 1006 (1288)
+.+..+.+.+...+...+..+...+..++..+..+..+.+.+..+..|..+......+++.......++.-+. ....+.
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999999999999998888887777777777666645555555566777775444444444444444444444 666788
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHH
Q 000777 1007 NKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKST 1086 (1288)
Q Consensus 1007 ~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKST 1086 (1288)
.+...++.|+.++.+++++...+.++. +.....++++||||+||++ .+++|+|+||++++||||||+|||||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~~~~~---~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFPDEQT---ATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCCcccc---CCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 889999999999999887765441111 1111279999999999965 568999999999999999999999999999
Q ss_pred HHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHH
Q 000777 1087 VVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFIC 1166 (1288)
Q Consensus 1087 L~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~ 1166 (1288)
|+++|.|.|+|++|+|.++|.+++.++.+.+|+.|++++|.+++|++|+|+||.+++ +++||||+|+|++++|++++++
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~-~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLAN-PDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcC-CCCCHHHHHHHHHHcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999985 5799999999999999999999
Q ss_pred hhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh
Q 000777 1167 SLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN 1246 (1288)
Q Consensus 1167 ~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~ 1246 (1288)
+.|+||+|++||+|.+||||||||+||||+||+|.|++||||||.+||++||++|.+.|.+..+++|+|+||||+..++.
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHH
Q 000777 1247 ADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 1281 (1288)
Q Consensus 1247 ~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1281 (1288)
||||+|||+|+++|+|+|.+|+++ +|.|++|++.
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q~ 572 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQL 572 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhcc
Confidence 999999999999999999999996 9999999763
No 32
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.5e-81 Score=796.20 Aligned_cols=567 Identities=27% Similarity=0.405 Sum_probs=499.5
Q ss_pred hHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 707 TRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFA 786 (1288)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 786 (1288)
+++++.+.++.++.+...++.+++..++....++++..+++......+ ......+.+.++++.++..++.+++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~--~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG--LSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555555556666666666666677777888877653211 112223344455566667888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000777 787 VAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLA 866 (1288)
Q Consensus 787 ~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 866 (1288)
.++.++..++|.++|++++++|++||+. +++|++++|+ +|++.++.++...+..++..++.+++.++++++++|+++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 281 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLT 281 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999994 8999999999 699999999998888888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 867 LIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVS 946 (1288)
Q Consensus 867 lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1288)
+++++++|+++++.++..+..++..++..+...+..+.+.|+++|+++||++|.|+.+.++|.+..++..+...+.....
T Consensus 282 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (694)
T TIGR01846 282 GVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLG 361 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888877777777777888889999999999999999999999999999999999999999888888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000777 947 GGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKI 1026 (1288)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1026 (1288)
.....+..++..+..++++++|++++..|.+|+|.++++..+...+..|+..+......++.+..+.+|+.++++.+++.
T Consensus 362 ~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 441 (694)
T TIGR01846 362 NIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEP 441 (694)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 87777788888888888999999999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECC
Q 000777 1027 DPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDG 1106 (1288)
Q Consensus 1027 ~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG 1106 (1288)
... .....+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 442 ~~~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 442 RSA--GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred cCC--CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 221 111122345789999999999743 35799999999999999999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1107 VEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1107 ~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
+|+++++.+++|++|+||||||.+|+|||+|||.++. ++++++++++|++.+++++++.++|+||||.+|++|.+||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~-~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgG 597 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCN-PGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGG 597 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCC-CCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHH
Confidence 9999999999999999999999999999999999974 478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhh
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|||||+|||||+++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|+|
T Consensus 598 q~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~ 677 (694)
T TIGR01846 598 QRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEE 677 (694)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred hhcCCCcHHHHHHHHhh
Q 000777 1267 LINIPDGFYASLIALHS 1283 (1288)
Q Consensus 1267 Ll~~~~g~y~~L~~~~~ 1283 (1288)
|+++ +|.|++|++.|.
T Consensus 678 l~~~-~~~y~~l~~~~~ 693 (694)
T TIGR01846 678 LLAL-QGLYARLWQQQS 693 (694)
T ss_pred HHHc-CChHHHHHHhhc
Confidence 9997 899999998764
No 33
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8.8e-81 Score=796.93 Aligned_cols=565 Identities=28% Similarity=0.413 Sum_probs=496.9
Q ss_pred ccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 44 VPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQ 123 (1288)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 123 (1288)
..+++++++.++.++ .+...++++++..++....|++++.++|.+..... ...+..+.+.++++.++.+++.+++
T Consensus 142 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~ 216 (708)
T TIGR01193 142 NSLLKFIPLITRQKK-LIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM----MGTLGIISIGLIIAYIIQQILSYIQ 216 (708)
T ss_pred chHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446667777765444 34455556666677777888899999998654321 1223334444555667778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000777 124 VTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKG 203 (1288)
Q Consensus 124 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1288)
.++..+.+.++..++|.+++++++++|+.||+++ ++|++++|++ |++.+++.+...+...+..+..+++.++++++++
T Consensus 217 ~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 294 (708)
T TIGR01193 217 IFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQN 294 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999975 9999999998 9999999988888777878778888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 000777 204 WLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQE 283 (1288)
Q Consensus 204 ~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 283 (1288)
|++++++++.+|+++++..++.+..++..++.++..++..+.+.|+++|+++||+|+.|+.+.++|.+...+..+...+.
T Consensus 295 ~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 374 (708)
T TIGR01193 295 MLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKY 374 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000777 284 GLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINR 363 (1288)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 363 (1288)
....+....+..++..+..++++++|++++.+|.+|+|.++++..+...+..|+..+...+..++.+..+.+|+.++++.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 375 QKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 77776666666666667777888999999999999999999999988888999999999999999999999999999987
Q ss_pred CCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 000777 364 KPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEV 443 (1288)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i 443 (1288)
+++.+.... ....++..+.|+++||+|+|+. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|
T Consensus 455 ~~e~~~~~~-~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I 531 (708)
T TIGR01193 455 DSEFINKKK-RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEI 531 (708)
T ss_pred CCccccccc-ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEE
Confidence 655332211 0112334578999999999963 4579999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcC-CCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCC
Q 000777 444 LIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYG-KDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQ 522 (1288)
Q Consensus 444 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 522 (1288)
++||+|+++++.+++|++|+||||+|+||++||+|||.++ .++.++++++++++.++++++++++|+||||.+||+|.+
T Consensus 532 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~ 611 (708)
T TIGR01193 532 LLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSS 611 (708)
T ss_pred EECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCC
Confidence 9999999999999999999999999999999999999998 578899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 523 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 523 LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
|||||||||+||||++++|+|||||||||+||+++++.+++.|+++ +++|+|+||||+++++.||+|++|++|++++.|
T Consensus 612 LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G 690 (708)
T TIGR01193 612 ISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQG 690 (708)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999999999999885 689999999999999999999999999999999
Q ss_pred ChhHHhcCCCchHHHHHH
Q 000777 603 THSKLVEDPEGAYSQLIR 620 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~~ 620 (1288)
+|+|++++ ++.|+++++
T Consensus 691 ~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 691 SHDELLDR-NGFYASLIH 707 (708)
T ss_pred CHHHHHhc-CCcHHHHhh
Confidence 99999987 788988763
No 34
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-81 Score=710.84 Aligned_cols=543 Identities=29% Similarity=0.431 Sum_probs=457.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-C-ccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 000777 732 GVILPIYGLLISSVIETFFKP-P-HELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEV 809 (1288)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 809 (1288)
-++....+.++...++..-.. . ........-.+..|++..++..+++.++.+.+.++.+++.++.-.++|.+++++++
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344444555555555544211 1 11111122345667888888999999999999999999999999999999999999
Q ss_pred cccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 810 SWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIA-FTASWQLALIILVMLPLIGVSGYTQMKFMK 888 (1288)
Q Consensus 810 ~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~ 888 (1288)
+||.+ ..+|.+.+.+.+....+...+...+..++..++.+......+ .-+.+..+++.+..+..++.+.+.......
T Consensus 123 ~~~~~--~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 123 SFFLS--RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred HhhcC--CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 99985 678999999999999999888888887777776665555433 335566666666666666666555566666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000777 889 GFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAG 968 (1288)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 968 (1288)
+..++..++...+.+.+.+++.+.++||.||.|++..++|...+.++.+...+.....+........+.....+.+.+.+
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~ 280 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLG 280 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67778888999999999999999999999999999999999999999888877766655544444455545556666777
Q ss_pred HHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEE
Q 000777 969 ARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHV 1048 (1288)
Q Consensus 969 ~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nV 1048 (1288)
..-+.+|.+|+++++.+...+.....++..+.....+..++......++.+.+........ ..+....++.|+|+||
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~---~~~i~~~~~~I~F~dV 357 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA---ALPIELFGGSIEFDDV 357 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc---cCCcccCCCcEEEEee
Confidence 7778899999999999999999999999999998888888888877777654433222111 1122234577999999
Q ss_pred EEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCC
Q 000777 1049 SFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEP 1128 (1288)
Q Consensus 1049 sf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~ 1128 (1288)
+|.|+ |++++|+++||+|++||||||||+|||||||++++|+||++ ++|+|+|||+||++++++.+|+.|||||||.
T Consensus 358 ~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~ 434 (591)
T KOG0057|consen 358 HFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDS 434 (591)
T ss_pred EEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcc
Confidence 99997 35579999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEec
Q 000777 1129 VLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDE 1208 (1288)
Q Consensus 1129 ~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDE 1208 (1288)
.||++||.+||.||. +.+++||+.++||++++||.+.++|+||+|.|||+|..||||||||++||||++++|||++|||
T Consensus 435 ~LFndTIl~NI~YGn-~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DE 513 (591)
T KOG0057|consen 435 VLFNDTILYNIKYGN-PSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDE 513 (591)
T ss_pred cccchhHHHHhhcCC-CCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecC
Confidence 999999999999995 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhhc
Q 000777 1209 ATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSS 1284 (1288)
Q Consensus 1209 aTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1284 (1288)
|||+||.+||+.|.+.+.....++|+|+|+||++++++||+|+++|+|+|+|.|+|+||++ +.+.|+++|..|..
T Consensus 514 aTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 514 ATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred cccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccccc
Confidence 9999999999999999999889999999999999999999999999999999999999999 59999999988753
No 35
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.7e-80 Score=795.37 Aligned_cols=564 Identities=25% Similarity=0.340 Sum_probs=495.4
Q ss_pred cHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 45 PFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQV 124 (1288)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 124 (1288)
.++.++++.++.+. .+...++++++..++..+.|++.+.++|....... ...+..+++.++++.++.+++.+++.
T Consensus 141 ~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~ 215 (710)
T TIGR03796 141 LLRALWRRLRGSRG-ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR----QDWLRPLLLGMGLTALLQGVLTWLQL 215 (710)
T ss_pred cHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666654433 23445555566666666778889999987653321 12233344445556677888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 125 TCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGW 204 (1288)
Q Consensus 125 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1288)
++....+.++..++|..++++++++|+++|+++ ++|++++|+++| +.+++++...+...+..+..+++.++++++++|
T Consensus 216 ~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 293 (710)
T TIGR03796 216 YYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDP 293 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999975 999999999988 689999988888888899899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 205 LLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEG 284 (1288)
Q Consensus 205 ~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 284 (1288)
.+++++++.+|+.+++..++.+..++..++.++..++..+.+.|.++|+++||++++|+.+.++|.+...+..+...+..
T Consensus 294 ~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 373 (710)
T TIGR03796 294 VLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELG 373 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888999999888888888999999999999999999999999999999999999988888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 000777 285 LAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRK 364 (1288)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 364 (1288)
...++...+..++..+..++++++|++++.+|.+++|.++++..+...+..|+..+...+..++.+..+.+|+.++++.+
T Consensus 374 ~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~ 453 (710)
T TIGR03796 374 VLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNP 453 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777777777777777888899999999999999999999999888889999999999999999999999999999876
Q ss_pred CCCccCCC---C-Cccc-CCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC
Q 000777 365 PEIDAYDT---K-GKIL-DDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ 439 (1288)
Q Consensus 365 ~~~~~~~~---~-~~~~-~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~ 439 (1288)
++.+.... . .... +...+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|+
T Consensus 454 ~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~ 532 (710)
T TIGR03796 454 VDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW 532 (710)
T ss_pred CccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 55322110 0 0111 2335689999999999743 467999999999999999999999999999999999999999
Q ss_pred CcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCC
Q 000777 440 AGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEH 519 (1288)
Q Consensus 440 ~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 519 (1288)
+|+|.+||+|+++++.+++|++|+||||+|++|++||+|||.++.|+.++++++++++.++++++++++|+|+||.+||+
T Consensus 533 ~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 533 SGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred CcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEe
Q 000777 520 GTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIV 599 (1288)
Q Consensus 520 g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 599 (1288)
|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.+++ .++|+|+||||+++++.||+|++|++|+|+
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999999987 489999999999999999999999999999
Q ss_pred EecChhHHhcCCCchHHHHH
Q 000777 600 EKGTHSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 600 ~~g~~~~l~~~~~~~~~~~~ 619 (1288)
+.|+|+||+++ ++.|++++
T Consensus 691 ~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 691 QRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EecCHHHHHHc-CCcHHHHh
Confidence 99999999986 78888775
No 36
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.5e-80 Score=770.38 Aligned_cols=566 Identities=22% Similarity=0.320 Sum_probs=487.6
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-chhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 46 FYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNN-SETVDKVSKVAVKFVYLGIGSGIASFLQV 124 (1288)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 124 (1288)
++++++|.+++++ .+++++++.++..++....|+++++++|........ ..... ....+..+++++++..++.+++.
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 81 (574)
T PRK11160 4 LLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFN-YMLPAAGVRGAAIGRTAGRYGER 81 (574)
T ss_pred hHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHH-HHhHHHHHHHHHHHHHHHHHHHH
Confidence 4456677766544 345666677777777778888999999864311110 00011 11122234456677888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 125 TCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGW 204 (1288)
Q Consensus 125 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1288)
++....+.++..++|.++++|++++|+.+|++. ++|++++|+++|++.++.++...+..++..++.++++++++++++|
T Consensus 82 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (574)
T PRK11160 82 LVSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDL 160 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999975 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 000777 205 LLTLVMLSSIPLLAMS-GGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQE 283 (1288)
Q Consensus 205 ~l~l~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 283 (1288)
.+++++++++|+++++ ..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.
T Consensus 161 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (574)
T PRK11160 161 TLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQ 240 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888876554 466677778888888889999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000777 284 GLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLT-GSMSLGEASPCLSAFGAGQAAAFKMFETIN 362 (1288)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 362 (1288)
....+...++..++..+..++++++|+++ .+|.++.|.+++++.+... ...++..+...+..++++.++++|+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~ 319 (574)
T PRK11160 241 ANLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITE 319 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888777777777777777788899888 4889999998887655433 345677777788889999999999999998
Q ss_pred cCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 000777 363 RKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGE 442 (1288)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 442 (1288)
.+++.+.... .......+.|+++||+|+|++. ++++|+|+||++++||+++||||||||||||+++|+|+|+|++|+
T Consensus 320 ~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~ 396 (574)
T PRK11160 320 QKPEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGE 396 (574)
T ss_pred CCCCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 7665332111 1112234679999999999742 357999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCC
Q 000777 443 VLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQ 522 (1288)
Q Consensus 443 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 522 (1288)
|.+||+|+++++.+++|++|+||||+|++|++||+|||.++.|+.++++++++++.+++++++++ |+||||.+||+|.+
T Consensus 397 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~ 475 (574)
T PRK11160 397 ILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQ 475 (574)
T ss_pred EEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999 99999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 523 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 523 LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
||||||||++||||++++|+|||||||||+||+++++.+++.++++.+++|+|+||||++++..||+|++|++|++++.|
T Consensus 476 LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g 555 (574)
T PRK11160 476 LSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQG 555 (574)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ChhHHhcCCCchHHHHHH
Q 000777 603 THSKLVEDPEGAYSQLIR 620 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~~ 620 (1288)
+|+|++++ ++.|+++++
T Consensus 556 ~~~~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 556 THQELLAQ-QGRYYQLKQ 572 (574)
T ss_pred CHHHHHhc-CcHHHHHHh
Confidence 99999987 789998875
No 37
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-80 Score=712.79 Aligned_cols=552 Identities=26% Similarity=0.408 Sum_probs=488.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 64 GSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYL 143 (1288)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 143 (1288)
..++.++.++......+++...++.+..... ...+..++..++++.++++++.+.+.......+.++...+|..++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~----~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL----FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666666666777777776654321 233455666677778889999999999999999999999999999
Q ss_pred HHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000777 144 KTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSGGV 223 (1288)
Q Consensus 144 ~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~~~ 223 (1288)
+++.++++.+-... ++|+..+.+...++.++.++...++.+....+..+..++.+|+++|..++++++++|++.+++..
T Consensus 81 ~~l~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 81 DKLAKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHHHhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998864 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 224 MAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYA 303 (1288)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (1288)
+++..++..++....+...++++-+.++|+.|+|.|+..+...+++.+..++..+..++.-+..-+...+..++.+++.+
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiA 239 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIA 239 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888888777766667777777777777
Q ss_pred HHHHHHHHHHhh-cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCcc
Q 000777 304 LSVWYGGKLILE-EGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIRG 382 (1288)
Q Consensus 304 ~~~~~g~~~v~~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~ 382 (1288)
++..+.+..... |.++....+.++...--++.|+..+...++.-+.+.++++.++.+++.+++..+.............
T Consensus 240 lvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (559)
T COG4988 240 LVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPI 319 (559)
T ss_pred HHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCc
Confidence 665555555555 7888877777777777778999999999999999999999999999876653332211111122223
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++|.||. ++++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||+++
T Consensus 320 ei~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 320 EISLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred eeeecceEEecCC--CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHe
Confidence 4556699999974 34899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000777 463 GLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPR 542 (1288)
Q Consensus 463 ~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~ 542 (1288)
+||+|+|++|++||||||.+++++.++++++++++.+++.+++.. |+|+||.+||+|.+|||||+||++||||++++++
T Consensus 398 ~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 398 SWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHHHHH
Q 000777 543 ILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 543 illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 622 (1288)
++|||||||+||.+||+.|.+.|.++.+++|+|+||||+..+.+||+|+|||+|+++++|+|++|.++ ++.|++++..|
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q 555 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQ 555 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 89999999776
Q ss_pred hh
Q 000777 623 EA 624 (1288)
Q Consensus 623 ~~ 624 (1288)
+.
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 43
No 38
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.1e-79 Score=771.76 Aligned_cols=564 Identities=34% Similarity=0.516 Sum_probs=504.8
Q ss_pred hhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 710 LAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAG 789 (1288)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 789 (1288)
++.+.++.++.++.+++.+++.+++.+..++++..+++..+... ......++...++++.++..++.+++.++..+.+
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR--DRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVS 82 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555667777777777777777777777777776554321 1111222334566667778888899999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000777 790 NKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALII 869 (1288)
Q Consensus 790 ~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~ 869 (1288)
.++...+|..+|+++++.|.++|++ .++|++.+|+++|++.++..+...+..++.+++.++++++++++++|++++++
T Consensus 83 ~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~ 160 (571)
T TIGR02203 83 NKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIV 160 (571)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999984 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 870 LVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGG 949 (1288)
Q Consensus 870 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1288)
++++|+.+++.++..+..++..++..+...+..+.+.|.++|+++||.++.++++.++|.+..++..+...+........
T Consensus 161 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (571)
T TIGR02203 161 VVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSIS 240 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888889999999999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000777 950 FGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPS 1029 (1288)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 1029 (1288)
..+...+..+...+.+++|+.++..|.+++|.++++..+...+..|+..+......+..+..+.+|+.++++.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (571)
T TIGR02203 241 SPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG 320 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 88888888888888999999999999999999999999999999999999999999999999999999998765443211
Q ss_pred CCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeec
Q 000777 1030 DESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEI 1109 (1288)
Q Consensus 1030 ~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di 1109 (1288)
. ...++..+.|+++||+|+|++. ++++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 321 ~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i 396 (571)
T TIGR02203 321 T---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDL 396 (571)
T ss_pred C---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeH
Confidence 1 1111234679999999999754 45799999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1110 QKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1110 ~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
++++.+++|++|+||||||++|+|||||||.++.+++.++++++++++.+++++++.++|+||||.+||+|.+|||||||
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQ 476 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQ 476 (571)
T ss_pred HhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHH
Confidence 99999999999999999999999999999999853378999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhc
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||||++++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 477 RiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 477 RLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999998
Q ss_pred CCCcHHHHHHHHh
Q 000777 1270 IPDGFYASLIALH 1282 (1288)
Q Consensus 1270 ~~~g~y~~L~~~~ 1282 (1288)
+ ++.|++++..+
T Consensus 557 ~-~~~~~~~~~~~ 568 (571)
T TIGR02203 557 R-NGLYAQLHNMQ 568 (571)
T ss_pred c-CCHHHHHHHHh
Confidence 6 78999998765
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.3e-79 Score=784.32 Aligned_cols=556 Identities=25% Similarity=0.383 Sum_probs=490.9
Q ss_pred cHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 45 PFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQV 124 (1288)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 124 (1288)
.++.++++.++.+. .+...++++++..++....|++++.++|....... ...+..+++.++++.++..++.+++.
T Consensus 134 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~ 208 (694)
T TIGR03375 134 PKHWFWSTLKESWP-LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA----FETLWVLAIGVALAIVFDFVLKTLRS 208 (694)
T ss_pred cchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc----HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666654433 33455556666667777888899999997653321 12233344445555667788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 125 TCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGW 204 (1288)
Q Consensus 125 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1288)
++..+.+.++..++|..+++|++++|+.| +++ ++|++++|+ +|++.+++.+...+...+..+..+++.++++++++|
T Consensus 209 ~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 285 (694)
T TIGR03375 209 YFLDVAGKKADLILSAKLFERVLGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGG 285 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998 554 899999999 799999999988877778788788888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 205 LLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEG 284 (1288)
Q Consensus 205 ~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 284 (1288)
.+++++++.+|+++++..++.++.++..++.++..++..+.+.|+++|+++||.|+.|+.+.++|.+...+..+...+..
T Consensus 286 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 365 (694)
T TIGR03375 286 PLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSR 365 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 000777 285 LAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRK 364 (1288)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 364 (1288)
...+....+..++..+..++++++|++++.+|.+++|.+++++.++..+..|+..+...+..+..+..+.+|+.++++.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~ 445 (694)
T TIGR03375 366 FLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLP 445 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88887777777777777788889999999999999999999999998889999999999999999999999999999876
Q ss_pred CCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 000777 365 PEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVL 444 (1288)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~ 444 (1288)
++.+... .....+...+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|.
T Consensus 446 ~e~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 523 (694)
T TIGR03375 446 VERPEGT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVL 523 (694)
T ss_pred CCCCCCC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 6532211 111122335689999999999742 45799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCC
Q 000777 445 IDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLS 524 (1288)
Q Consensus 445 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 524 (1288)
+||+|+++++.+++|++|+||||+|++|++||+|||.++.|+.++++++++++.++++++++++|+|+||.+||+|.+||
T Consensus 524 idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LS 603 (694)
T TIGR03375 524 LDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLS 603 (694)
T ss_pred ECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCC
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecCh
Q 000777 525 GGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 525 gGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 604 (1288)
||||||++||||++++|+|||||||||+||+++++.+++.|.++.+++|+|+||||+++++.||+|++|++|++++.|+|
T Consensus 604 gGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~ 683 (694)
T TIGR03375 604 GGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPK 683 (694)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred hHHhcC
Q 000777 605 SKLVED 610 (1288)
Q Consensus 605 ~~l~~~ 610 (1288)
+||++.
T Consensus 684 ~eLl~~ 689 (694)
T TIGR03375 684 DQVLEA 689 (694)
T ss_pred HHHHHH
Confidence 999865
No 40
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.6e-78 Score=761.87 Aligned_cols=565 Identities=31% Similarity=0.521 Sum_probs=493.4
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 47 YKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTC 126 (1288)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 126 (1288)
+.++++.++.++. ++..+++.++..++....+++++.++|...... . ...+....+.+++++++.+++.+++.++
T Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 88 (582)
T PRK11176 14 RRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKA-D---RSVLKWMPLVVIGLMILRGITSFISSYC 88 (582)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-c---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555554443 344445566666666777788888887654221 1 1122223333445667778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000777 127 WMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLL 206 (1288)
Q Consensus 127 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 206 (1288)
..+.+.++..++|..++++++++|.++|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+
T Consensus 89 ~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 167 (582)
T PRK11176 89 ISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQL 167 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999875 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 207 TLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLA 286 (1288)
Q Consensus 207 ~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1288)
++++++++|+.+++..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+....
T Consensus 168 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (582)
T PRK11176 168 SLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSA 247 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888999999999999999999999999999999999999999998888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 000777 287 AGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPE 366 (1288)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~ 366 (1288)
..+...+..++..+..++++++|++.+.+|.+++|.+++++.++.....|+..+...+..+..+..+.+|+.++++.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 327 (582)
T PRK11176 248 SSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQE 327 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 77777767777667777788899999999999999999888888888899999999999999999999999999986544
Q ss_pred CccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEEC
Q 000777 367 IDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLID 446 (1288)
Q Consensus 367 ~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~ 446 (1288)
.+... ...++..+.|+++||+|+|++. ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++|
T Consensus 328 ~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~ 403 (582)
T PRK11176 328 KDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLD 403 (582)
T ss_pred CCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEEC
Confidence 22111 1112234579999999999743 4679999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCC-CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCCh
Q 000777 447 GINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD-ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSG 525 (1288)
Q Consensus 447 g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 525 (1288)
|+|+++++.+++|++|+||||+|++|++||+|||.+|.++ .++++++++++.++++++++++|+|+||.+|++|.+|||
T Consensus 404 g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSG 483 (582)
T PRK11176 404 GHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSG 483 (582)
T ss_pred CEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCH
Confidence 9999999999999999999999999999999999998764 789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChh
Q 000777 526 GQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 526 Gqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~ 605 (1288)
||||||+||||++++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|++++.|+|+
T Consensus 484 GqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~ 563 (582)
T PRK11176 484 GQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHA 563 (582)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHhcCCCchHHHHHHHH
Q 000777 606 KLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 606 ~l~~~~~~~~~~~~~~~ 622 (1288)
++++. ++.|++++..+
T Consensus 564 ~l~~~-~~~y~~l~~~~ 579 (582)
T PRK11176 564 ELLAQ-NGVYAQLHKMQ 579 (582)
T ss_pred HHHhC-CChHHHHHHHH
Confidence 99987 68899988654
No 41
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.3e-78 Score=761.55 Aligned_cols=562 Identities=30% Similarity=0.409 Sum_probs=482.5
Q ss_pred hhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 709 RLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVA 788 (1288)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 788 (1288)
++..+.++.+..+...++.+++..++....++++..+++..... .....+.++++++.++..+..++..++..+.
T Consensus 9 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (588)
T PRK13657 9 RVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK-----GDIFPLLAAWAGFGLFNIIAGVLVARHADRL 83 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455566666666666666666677777778888765432 1111222333333344444444455555556
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000777 789 GNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALI 868 (1288)
Q Consensus 789 ~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 868 (1288)
..++..+++.++|+++++.|+.+|++ .+.|++++|+++|++.+...+...+..++..++.+++.++++++++|+++++
T Consensus 84 ~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 161 (588)
T PRK13657 84 AHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLV 161 (588)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677779999999999999984 8899999999999999999888888888888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000777 869 ILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGG 948 (1288)
Q Consensus 869 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1288)
+++++|+.+++.++..+..++..++..+...+..+.+.|.++|+++||.|+.++.+.++|.+..++..+...+.......
T Consensus 162 ~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (588)
T PRK13657 162 LVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWAL 241 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888777777777777777888889999999999999999999999999999999999998888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000777 949 GFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDP 1028 (1288)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 1028 (1288)
...+..++..+...+++++|++++..|.+++|.+++++.+...+..++..+.........+..+.+|+.++++.+++.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 321 (588)
T PRK13657 242 ASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRD 321 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 77777777778888889999999999999999999999999999999999999999999999999999999876543221
Q ss_pred CCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCee
Q 000777 1029 SDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVE 1108 (1288)
Q Consensus 1029 ~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d 1108 (1288)
.. .....+...+.|+|+||+|+||++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||.|
T Consensus 322 ~~-~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~ 398 (588)
T PRK13657 322 PP-GAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTD 398 (588)
T ss_pred CC-CCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEE
Confidence 11 111112234579999999999742 469999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1109 IQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1109 i~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
+++++.+++|++|+||||||.+|+|||||||.++. ++.+|++++++++.+++++++.++|+|+||.+|++|.+||||||
T Consensus 399 i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~-~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~ 477 (588)
T PRK13657 399 IRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGR-PDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGER 477 (588)
T ss_pred hhhCCHHHHHhheEEEecCcccccccHHHHHhcCC-CCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHH
Confidence 99999999999999999999999999999999984 46899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|||||||||+++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|++|+
T Consensus 478 QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~ 557 (588)
T PRK13657 478 QRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELV 557 (588)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHh
Q 000777 1269 NIPDGFYASLIALH 1282 (1288)
Q Consensus 1269 ~~~~g~y~~L~~~~ 1282 (1288)
++ ++.|++|++.+
T Consensus 558 ~~-~~~y~~l~~~~ 570 (588)
T PRK13657 558 AR-GGRFAALLRAQ 570 (588)
T ss_pred HC-CChHHHHHHHh
Confidence 86 89999999865
No 42
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=5.8e-79 Score=756.58 Aligned_cols=521 Identities=24% Similarity=0.314 Sum_probs=448.2
Q ss_pred hhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 000777 711 AYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWAL--IYLALGAGSFLLSPAQSYFFAVA 788 (1288)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~ 788 (1288)
..+.+++++.++..++.+++..+.....+++++.+++....... ...++.. .++++.++..++.++..++..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (529)
T TIGR02868 5 LPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP----VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDA 80 (529)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566666666666666666666777777777776542111 1111111 12234456677888889999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000777 789 GNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALI 868 (1288)
Q Consensus 789 ~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 868 (1288)
+.++..++|.++|++++++|.+||++ +++|++++|+++|++.++..+...+..++..++.++++++++++++|.++++
T Consensus 81 ~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 158 (529)
T TIGR02868 81 ALRSLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALV 158 (529)
T ss_pred HHHHHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999984 8899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 869 ILVMLPLIGVSG-YTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSG 947 (1288)
Q Consensus 869 ~l~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1288)
+++.+|++.++. ++..+..+...++.++..++..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+.....+
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02868 159 LAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATG 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988877766554 4444444555566677778889999999999999999999999999999999999998888888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000777 948 GGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKID 1027 (1288)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 1027 (1288)
....+..++..+...+++++|++++..|.+++|.+.+++.+...+..++..+......+.++..+.+|+.++++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (529)
T TIGR02868 239 LGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRP 318 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcC
Confidence 77777888888888888899999999999999999999999899999999999999999999999999999997665432
Q ss_pred CCCCC-CccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECC
Q 000777 1028 PSDES-GTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDG 1106 (1288)
Q Consensus 1028 ~~~~~-~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG 1106 (1288)
..+.+ ....++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||
T Consensus 319 ~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g 396 (529)
T TIGR02868 319 EGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDG 396 (529)
T ss_pred CCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECC
Confidence 11111 11111234679999999999753 3699999999999999999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1107 VEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1107 ~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
+|++++ .+++|++|+||||||+||+|||||||++|. ++++||++++|++.++++|||.++|+||||++||+|.+||||
T Consensus 397 ~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~-~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 474 (529)
T TIGR02868 397 VSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGR-PDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGG 474 (529)
T ss_pred EEhhhH-HHHHHhheEEEccCcccccccHHHHHhccC-CCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHH
Confidence 999999 999999999999999999999999999984 478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCc
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRL 1241 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl 1241 (1288)
||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 475 QrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 475 ERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999988999999999996
No 43
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4e-78 Score=769.92 Aligned_cols=568 Identities=28% Similarity=0.410 Sum_probs=499.3
Q ss_pred ccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 44 VPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQ 123 (1288)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 123 (1288)
..+..++++.++.+. .+...+++.++..++....|++++.++|....... ...+..+++.++++.++.+++.+++
T Consensus 125 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~----~~~l~~l~~~~~~~~~~~~~~~~l~ 199 (694)
T TIGR01846 125 FGFSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG----LSTLSVLALAMLAVAIFEPALGGLR 199 (694)
T ss_pred CcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC----hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666554433 33445555566666667778899999997653221 2233344455566667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000777 124 VTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKG 203 (1288)
Q Consensus 124 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1288)
.++....+.++..++|.+++++++++|+.||+++ ++|++++|+ +|++.+++++...+...+..+..+++.++++++++
T Consensus 200 ~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 277 (694)
T TIGR01846 200 TYLFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYS 277 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999975 999999999 69999999998877777777776777788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 000777 204 WLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQE 283 (1288)
Q Consensus 204 ~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 283 (1288)
|.+++++++++|+++++..++.+..++..++.++..++..+.+.|+++|+++||+++.|+.+.++|.+...+..+...+.
T Consensus 278 ~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 357 (694)
T TIGR01846 278 PTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRV 357 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888888888888999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000777 284 GLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINR 363 (1288)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 363 (1288)
....+....+..++..+..++++++|++++.+|.+|.|.++++..+......|+..+...+..++.+..+.+|+.++++.
T Consensus 358 ~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 437 (694)
T TIGR01846 358 TNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNS 437 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88887777777777777788889999999999999999999999888888999999999999999999999999999987
Q ss_pred CCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 000777 364 KPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEV 443 (1288)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i 443 (1288)
+++.+.. .....+...+.|+++||+|+|+.. ++++|+|+||+|++||+++|||+||||||||+++|+|+|+|++|+|
T Consensus 438 ~~e~~~~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I 514 (694)
T TIGR01846 438 PTEPRSA--GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV 514 (694)
T ss_pred CCCccCC--CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 6553221 111122335689999999999743 3579999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCC
Q 000777 444 LIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQL 523 (1288)
Q Consensus 444 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 523 (1288)
++||+|+++++.+++|++|+||+|+|++|++||+|||.++.|+.++++++++++.++++++++++|+|+||.+|++|.+|
T Consensus 515 ~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~L 594 (694)
T TIGR01846 515 LVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANL 594 (694)
T ss_pred EECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCC
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecC
Q 000777 524 SGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 524 SgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 603 (1288)
|||||||++||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 595 SgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~ 674 (694)
T TIGR01846 595 SGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGR 674 (694)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred hhHHhcCCCchHHHHHHHH
Q 000777 604 HSKLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 604 ~~~l~~~~~~~~~~~~~~~ 622 (1288)
|++++++ ++.|+++++.+
T Consensus 675 ~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 675 HEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred HHHHHHc-CChHHHHHHhh
Confidence 9999987 68999988643
No 44
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.1e-78 Score=760.55 Aligned_cols=567 Identities=36% Similarity=0.547 Sum_probs=493.0
Q ss_pred hhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 710 LAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAG 789 (1288)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 789 (1288)
++.+.++.++.+...++.+++.+++....++++..+++..+...+ ......+..+++++.++..++.+++.++..+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (576)
T TIGR02204 9 LWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS--SGLLNRYFAFLLVVALVLALGTAARFYLVTWLG 86 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455566666666677777777777888888876442211 111222334445555566777888889999999
Q ss_pred HHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000777 790 NKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALII 869 (1288)
Q Consensus 790 ~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~ 869 (1288)
.++..++|..+++++++.|.++|+. .++|++++|+++|++.++.++...+..++..++.+++.++++++++|++++++
T Consensus 87 ~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 87 ERVVADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999985 77999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 870 LVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGG 949 (1288)
Q Consensus 870 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1288)
++.+|+.++..++..+..++..++..+...+..+.+.|.++|+++||+++.++++.++|.+..++..+...+........
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888888888888888888888999999999999999999999999999999999998888877777666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000777 950 FGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPS 1029 (1288)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 1029 (1288)
..+...+.+...++.+++|++++..|.+++|.++++..+...+..|+..+......+..+..+.+|+.++++.+++.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 56666666666777888999999999999999999999999999999999999999999999999999998765442211
Q ss_pred CCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeec
Q 000777 1030 DESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEI 1109 (1288)
Q Consensus 1030 ~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di 1109 (1288)
........+..+.|+|+||+|+||+++++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i 404 (576)
T TIGR02204 325 AHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDL 404 (576)
T ss_pred CCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEH
Confidence 11111111234579999999999864335799999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1110 QKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1110 ~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
++++.+++|++|+||||||++|+|||||||.++. ++.++++++++++.+++.+++.++|+|+||++||+|.+|||||||
T Consensus 405 ~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~-~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 405 RQLDPAELRARMALVPQDPVLFAASVMENIRYGR-PDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HhcCHHHHHHhceEEccCCccccccHHHHHhcCC-CCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 9999999999999999999999999999999974 467899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhc
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
||+||||++++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHh
Q 000777 1270 IPDGFYASLIALH 1282 (1288)
Q Consensus 1270 ~~~g~y~~L~~~~ 1282 (1288)
+ ++.|++|++.|
T Consensus 564 ~-~~~~~~l~~~~ 575 (576)
T TIGR02204 564 K-GGLYARLARLQ 575 (576)
T ss_pred c-CChHHHHHhhc
Confidence 6 89999999765
No 45
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=4.3e-78 Score=752.38 Aligned_cols=564 Identities=28% Similarity=0.393 Sum_probs=486.9
Q ss_pred HhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 708 RRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAV 787 (1288)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 787 (1288)
+++..+.+++++.++..++.+++..++....+++++.+++....... ...+.++++++.++..+..++..++...
T Consensus 8 ~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (585)
T TIGR01192 8 VRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD-----VLPTLALWAGFGVFNTIAYVLVAREADR 82 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556677777777777777788888888888888887653211 1112222223333444455555555556
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000777 788 AGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLAL 867 (1288)
Q Consensus 788 ~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 867 (1288)
...++..++|.++|++++++|++||++ +++|++++|+++|++.+...+...+..++..++.+++.++++++++|.+++
T Consensus 83 ~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 160 (585)
T TIGR01192 83 LAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSI 160 (585)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666677777789999999999999984 789999999999999999999999988888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 868 IILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSG 947 (1288)
Q Consensus 868 v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1288)
++++++|+++++.....+..++..++......+..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+......
T Consensus 161 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (585)
T TIGR01192 161 VLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWA 240 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888777777777778888899999999999999999999999999999999988888777777666
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000777 948 GGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKID 1027 (1288)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 1027 (1288)
....+..++..+..++++++|++++..|.+++|.++++..+...+..++..+.........+..+.+|+.++.+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 320 (585)
T TIGR01192 241 LASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQRE 320 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 66666667777777888899999999999999999999999999999999999999999999999999999987654322
Q ss_pred CCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCe
Q 000777 1028 PSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGV 1107 (1288)
Q Consensus 1028 ~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1107 (1288)
..... ...+...+.|+|+||+|+|++. .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++||.
T Consensus 321 ~~~~~-~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~ 397 (585)
T TIGR01192 321 EPADA-PELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGI 397 (585)
T ss_pred CCccC-CCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCE
Confidence 11111 1112234579999999999743 36899999999999999999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1108 EIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1108 di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
|+++++.+.+|++++||||||.+|++||+|||.++. +++++++++++++.+++++++.++|+|+||.+|++|.+|||||
T Consensus 398 ~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~-~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq 476 (585)
T TIGR01192 398 DINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGR-EGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGE 476 (585)
T ss_pred EhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCC-CCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHH
Confidence 999999999999999999999999999999999984 4679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhh
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||||+|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 477 ~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 556 (585)
T TIGR01192 477 RQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQEL 556 (585)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hcCCCcHHHHHHHHhh
Q 000777 1268 INIPDGFYASLIALHS 1283 (1288)
Q Consensus 1268 l~~~~g~y~~L~~~~~ 1283 (1288)
+++ +|.|+++++.+.
T Consensus 557 ~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 557 IQK-DGRFYKLLRRSG 571 (585)
T ss_pred HHC-CChHHHHHHhCc
Confidence 996 899999998774
No 46
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.9e-78 Score=756.37 Aligned_cols=565 Identities=24% Similarity=0.343 Sum_probs=478.1
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 46 FYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVT 125 (1288)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 125 (1288)
+++++.|.+++++ .++..+++.++..++.+..|++++.++|......+.. ......++++++++.++.+++.+++.+
T Consensus 11 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (592)
T PRK10790 11 LKRLLAYGSPWRK-PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLP--LGLVAGLAAAYVGLQLLAAGLHYAQSL 87 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556554433 3455666677777788888999999999765322111 111122233344555667788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000777 126 CWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWL 205 (1288)
Q Consensus 126 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 205 (1288)
+....+.++..++|.+++++++++|+++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.
T Consensus 88 ~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 88 LFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999975 99999999999999999999999998999988888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 206 LTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGL 285 (1288)
Q Consensus 206 l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 285 (1288)
+++++++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||.|+.|+.+.++|.+..++..+...+...
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888877777777777777777778888999999999999999999999999999999888877777666555
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 000777 286 AAGIG-LGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRK 364 (1288)
Q Consensus 286 ~~~~~-~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 364 (1288)
..+.. ..+..++..+...+++++++. +..|.++.|.+++++.+......|+..+...+..+..+..+++|+.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 325 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGP 325 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 54432 222222222222222223333 5789999999999998888889999999999999999999999999999865
Q ss_pred CCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 000777 365 PEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVL 444 (1288)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~ 444 (1288)
++... . ...+...+.|+++||+|+|+. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|.
T Consensus 326 ~~~~~-~---~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 326 RQQYG-N---DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred CccCC-C---CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 43211 1 111223467999999999973 35799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCC
Q 000777 445 IDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLS 524 (1288)
Q Consensus 445 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 524 (1288)
+||+|+++++.+++|++|+||||+|++|++||+|||.++. +.++++++++++.++++++++++|+|+||.+|++|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999997 688999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecCh
Q 000777 525 GGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 525 gGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 604 (1288)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred hHHhcCCCchHHHHHHHHh
Q 000777 605 SKLVEDPEGAYSQLIRLQE 623 (1288)
Q Consensus 605 ~~l~~~~~~~~~~~~~~~~ 623 (1288)
+||++. ++.|+++++.+.
T Consensus 559 ~~L~~~-~~~y~~l~~~~~ 576 (592)
T PRK10790 559 QQLLAA-QGRYWQMYQLQL 576 (592)
T ss_pred HHHHhC-CCHHHHHHHHHh
Confidence 999987 789999987654
No 47
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.7e-78 Score=753.50 Aligned_cols=542 Identities=26% Similarity=0.424 Sum_probs=473.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccc
Q 000777 734 ILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFD 813 (1288)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd 813 (1288)
+....++++..+++.+...... ......|.++++++.++..++.++..++....+.++..++|.++|++++++|++||+
T Consensus 10 ~~~~~p~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~ 88 (569)
T PRK10789 10 LQLIPPKVVGIIVDGVTEQHMT-TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYL 88 (569)
T ss_pred HHHHHHHHHHHHHHHhccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHc
Confidence 3344556666777765432111 112233445555556667778888888889999999999999999999999999998
Q ss_pred cCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 814 EPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIA-FTASWQLALIILVMLPLIGVSGYTQMKFMKGFSA 892 (1288)
Q Consensus 814 ~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~ 892 (1288)
+ +++|++++|+++|++.++..+...+..++..++..+++++++ ++++|.+++++++++|+.+++.+...+...+..+
T Consensus 89 ~--~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~ 166 (569)
T PRK10789 89 R--HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFK 166 (569)
T ss_pred C--CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 889999999999999999888888888888766666666555 5899999999999999988888888888777777
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 893 DAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLV 972 (1288)
Q Consensus 893 ~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv 972 (1288)
+.++..++..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....+....+...+..+...+.+++|++++
T Consensus 167 ~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv 246 (569)
T PRK10789 167 LAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMV 246 (569)
T ss_pred HHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888999999999999999999999999999999999988888887777776666666666667777888999999
Q ss_pred hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEEC
Q 000777 973 EDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKY 1052 (1288)
Q Consensus 973 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y 1052 (1288)
..|.+++|.++++..+......|+..+......+..+..+.+|+.++++.+++.+... ...+...+.|+|+||+|+|
T Consensus 247 ~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~y 323 (569)
T PRK10789 247 VNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFTY 323 (569)
T ss_pred HcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEEC
Confidence 9999999999999999999999999999999999999999999999988654322111 1112234679999999999
Q ss_pred CCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCch
Q 000777 1053 PSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFN 1132 (1288)
Q Consensus 1053 ~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~ 1132 (1288)
+.. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+.+|++++||||+|++|+
T Consensus 324 ~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~ 402 (569)
T PRK10789 324 PQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFS 402 (569)
T ss_pred CCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeecc
Confidence 753 4579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCC
Q 000777 1133 DTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSA 1212 (1288)
Q Consensus 1133 gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSa 1212 (1288)
+||+|||.++. +++++++++++++.+++++++.++|+|+||.+|++|.+|||||||||+||||++++|+|||||||||+
T Consensus 403 ~ti~~Ni~~~~-~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 403 DTVANNIALGR-PDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred ccHHHHHhcCC-CCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 99999999984 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHhhc
Q 000777 1213 LDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSS 1284 (1288)
Q Consensus 1213 LD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1284 (1288)
||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|++++..|..
T Consensus 482 LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 482 VDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 9999999999999998889999999999999999999999999999999999999986 7999999987643
No 48
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-81 Score=690.82 Aligned_cols=549 Identities=28% Similarity=0.396 Sum_probs=462.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 66 IGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGI------GSGIASFLQVTCWMITGERQATRIR 139 (1288)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i------~~~~~~~~~~~~~~~~~~~~~~~lr 139 (1288)
++..+.-+.....|.+..++.|.... +..... ...+.++++.+ ++.+++-+++++|....+-..+++-
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~lta---p~~~~~---~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie 295 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTA---PDTFQY---SLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIE 295 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcC---cchhhH---HHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHH
Confidence 33344444555667778888876542 111111 11222233322 2456777788888888888999999
Q ss_pred HHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHH
Q 000777 140 GLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLI-AFIKGWLLTLVMLSSIPLLA 218 (1288)
Q Consensus 140 ~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~l~l~~~~~~p~~~ 218 (1288)
..+|+|++.+++.|+-.+ ++|+++.-++...+.+. ++...+.++.-.++-+.++++. ...++|+.++++++++.+..
T Consensus 296 ~~lfrHlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~ 373 (790)
T KOG0056|consen 296 TELFRHLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYC 373 (790)
T ss_pred HHHHHHHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHh
Confidence 999999999999999875 89999988887777665 4444433333333333333333 34578889999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 219 MSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIV 298 (1288)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1288)
.+...+.-+..+..++...++.+..+.-.+++-+.+|||.|++|+++.++|.+...++.+..+|......+....-+.+.
T Consensus 374 ~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii 453 (790)
T KOG0056|consen 374 YVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGII 453 (790)
T ss_pred heeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 76666666667777777777888888889999999999999999999999999988888887776666555555555555
Q ss_pred HHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccC
Q 000777 299 FCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILD 378 (1288)
Q Consensus 299 ~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 378 (1288)
.+..+....+.+++|..+.+++|+.+.+..+++.+.+|+..+...+..++.+..-.++++++++++|++.+.+ ...+..
T Consensus 454 ~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~a~pl~ 532 (790)
T KOG0056|consen 454 GLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-GAPPLK 532 (790)
T ss_pred hhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-CCCCcc
Confidence 5555566666778888999999999999999999999999999999999999999999999999988865433 223344
Q ss_pred CCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH
Q 000777 379 DIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI 458 (1288)
Q Consensus 379 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 458 (1288)
...|.|+|+||+|.|+ +++++|+||||+++||+.+|+|||||+||||++++|.|+++.++|.|.+||+||+......+
T Consensus 533 ~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SL 610 (790)
T KOG0056|consen 533 VTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSL 610 (790)
T ss_pred ccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHH
Confidence 5578999999999996 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 459 RKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 459 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
|++||+||||..|||+||..||.|++|.+++|++.+|++.+++||.|.++|+||+|.|||+|-.|||||||||||||+++
T Consensus 611 Rs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiL 690 (790)
T KOG0056|consen 611 RSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTIL 690 (790)
T ss_pred HHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHH
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQL 618 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 618 (1288)
++|.|++|||+|||||..||+.||.++.+++.+||.|+|+||++++-+||.|+|+++|+|+|.|+|+||+.+++|.|++|
T Consensus 691 K~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~M 770 (790)
T KOG0056|consen 691 KAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADM 770 (790)
T ss_pred cCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred HHHHhhc
Q 000777 619 IRLQEAN 625 (1288)
Q Consensus 619 ~~~~~~~ 625 (1288)
|+.|...
T Consensus 771 Wq~qqa~ 777 (790)
T KOG0056|consen 771 WQAQQAM 777 (790)
T ss_pred HHHHHhc
Confidence 9877553
No 49
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-80 Score=679.57 Aligned_cols=493 Identities=34% Similarity=0.475 Sum_probs=431.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000777 782 SYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLII-AFT 860 (1288)
Q Consensus 782 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~-~~~ 860 (1288)
..++...++.+...+--+.|.|+.++++.|.-+ +.+|.+..-+......++..+...+...+..++-+....++ ...
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~ 80 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRV 80 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 345667777888888889999999999999874 66787777777677677777777777766666665544444 446
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 000777 861 ASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGI 940 (1288)
Q Consensus 861 ~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1288)
++|+.+++.++++.+++++......-.....+..+....+++..-.+++-+.+|+|.|+.|+.+..+|.+..+.+.++..
T Consensus 81 ~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~ 160 (497)
T COG5265 81 YGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAI 160 (497)
T ss_pred cccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHH
Confidence 78999999998888888777666555556677888888999999999999999999999999999999999999998887
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000777 941 RQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAII 1020 (1288)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~ 1020 (1288)
+....-.........+.........+.+...+..|.+|+|+++....++.....|+..++....+..++....+++++++
T Consensus 161 k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 161 KVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 76554444444444444455556667788889999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCc
Q 000777 1021 DRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAG 1100 (1288)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G 1100 (1288)
+.+.+....+..++..+-..|.|.|+||+|.|.. .+|+|+|+||++++|+++|+||+||+||||+.++|+|||++++|
T Consensus 241 ~~~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 241 DVEAEVSDAPDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred ccchhhccCCCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 8776654332222222234678999999999964 56899999999999999999999999999999999999999999
Q ss_pred eEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCC
Q 000777 1101 HITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERG 1180 (1288)
Q Consensus 1101 ~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G 1180 (1288)
+|.|||+||+++..+++|+.||+||||.+||++|+..|+.||. ++++++|++.|++.+++++||.++|+||||.|||+|
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr-~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerg 397 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGR-PDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERG 397 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccC-ccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhe
Confidence 9999999999999999999999999999999999999999995 589999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000777 1181 LQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVE 1260 (1288)
Q Consensus 1181 ~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive 1260 (1288)
-.||||||||+||||++|++|+||+||||||+||..||++||.+|++..+++|.++|||||+||.+||.|+||++|+|+|
T Consensus 398 lklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~e 477 (497)
T COG5265 398 LKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVE 477 (497)
T ss_pred eeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhhhhcCCCcHHHHHHH
Q 000777 1261 KGKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1261 ~Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
.|+|+||+++ +|.|++||.
T Consensus 478 rg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 478 RGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred cCcHHHHHHc-CChHHHHhc
Confidence 9999999997 999999985
No 50
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.5e-77 Score=748.27 Aligned_cols=564 Identities=33% Similarity=0.529 Sum_probs=503.5
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 48 KLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCW 127 (1288)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 127 (1288)
.++++.++.+ ..+++++++.++.+++.+..|++++.+++....... ...+..++..++++.++.+++.+++.++.
T Consensus 4 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (571)
T TIGR02203 4 RLWSYVRPYK-AGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD----RSVLWWVPLVVIGLAVLRGICSFVSTYLL 78 (571)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555554433 345667777888888888889999988886543211 12233344456667778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000777 128 MITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLT 207 (1288)
Q Consensus 128 ~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 207 (1288)
...+.++..++|..+++++++.|.++|++. +.|++++|+++|++.+++.+...+..++..+..+++.++++++++|.++
T Consensus 79 ~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~ 157 (571)
T TIGR02203 79 SWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLT 157 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999999875 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 208 LVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAA 287 (1288)
Q Consensus 208 l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1288)
+++++++|+++++..++.++.++...+.++..++..+.+.|.++|+++||.++.++.+.++|.+..++..+...+.....
T Consensus 158 ~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (571)
T TIGR02203 158 LIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAG 237 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000777 288 GIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEI 367 (1288)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~ 367 (1288)
+....+..++..+..++++++|++++.+|.+++|.++++..++.....|+..+...+..+..++.+.+|+.++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 317 (571)
T TIGR02203 238 SISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEK 317 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 77777777777777888889999999999999999999999999999999999999999999999999999999866553
Q ss_pred ccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECC
Q 000777 368 DAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDG 447 (1288)
Q Consensus 368 ~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g 447 (1288)
+... ....+..+.|+++||+|+|+++ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||
T Consensus 318 ~~~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g 393 (571)
T TIGR02203 318 DTGT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDG 393 (571)
T ss_pred CCCC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECC
Confidence 2211 1112234679999999999753 46799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCC-CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 448 INLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKD-DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 448 ~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
+++++++.+++|++|+||||+|++|++|++|||.++.+ +.++++++++++.+++++++.++|+|+||.+|++|.+||||
T Consensus 394 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 473 (571)
T TIGR02203 394 HDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGG 473 (571)
T ss_pred EeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHH
Confidence 99999999999999999999999999999999999986 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhH
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|||||+||||++++|+|+|||||||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|++++.|+|++
T Consensus 474 qrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~ 553 (571)
T TIGR02203 474 QRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNE 553 (571)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHH
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred HhcCCCchHHHHHHHH
Q 000777 607 LVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 607 l~~~~~~~~~~~~~~~ 622 (1288)
++++ ++.|++++..+
T Consensus 554 l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 554 LLAR-NGLYAQLHNMQ 568 (571)
T ss_pred HHHc-CCHHHHHHHHh
Confidence 9987 67888876543
No 51
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.5e-78 Score=681.17 Aligned_cols=555 Identities=27% Similarity=0.396 Sum_probs=467.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 61 MIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRG 140 (1288)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~ 140 (1288)
++.++++.+.+.......|.+++..+|..................+..|.++.++..++..++...+.+..+++....-.
T Consensus 32 v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~ 111 (591)
T KOG0057|consen 32 VFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSS 111 (591)
T ss_pred HHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555566777778888999888876321111122233445566778888999999999999999999999999999
Q ss_pred HHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHH
Q 000777 141 LYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGF-LIAFIKGWLLTLVMLSSIPLLAM 219 (1288)
Q Consensus 141 ~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~l~l~~~~~~p~~~~ 219 (1288)
.+|.+++.+++++|.+. .+|++.+.+..-...|...+.-.+..++..++-+.... ++..-.+...+++++..+..+..
T Consensus 112 ~vf~~~~~ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a 190 (591)
T KOG0057|consen 112 DVFRHLMSLDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAA 190 (591)
T ss_pred HHHHHHHhhhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhe
Confidence 99999999999999875 89999999999999999888766666555444333322 33444556666666666666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 220 SGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVF 299 (1288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1288)
+......+..+..++..++.+.+.+.+-+++.+-.+||.||.|+++.++|.....+..+.+.+.....++....-..+..
T Consensus 191 ~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFs 270 (591)
T KOG0057|consen 191 FTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFS 270 (591)
T ss_pred eEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHH
Confidence 56666666666667777888999999999999999999999999999999999999998888877776666555555555
Q ss_pred HHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCC
Q 000777 300 CSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDD 379 (1288)
Q Consensus 300 ~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 379 (1288)
+..+.+++.|..-+.++.+++|+++.....+..+..|+..+...+..+.++..-...++...+....+.. ...+...
T Consensus 271 v~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~---~~~~i~~ 347 (591)
T KOG0057|consen 271 VALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE---AALPIEL 347 (591)
T ss_pred HHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh---ccCCccc
Confidence 6666667777777888999999999888888888889998888888888887776666655433222111 1122233
Q ss_pred CcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHh
Q 000777 380 IRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIR 459 (1288)
Q Consensus 380 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r 459 (1288)
.++.|+|+||+|+|+ +++++|+++||+|++||++||||+|||||||++++|+|+++ ++|+|+|||+|+++++++.+|
T Consensus 348 ~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR 424 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLR 424 (591)
T ss_pred CCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhh
Confidence 456799999999997 45679999999999999999999999999999999999999 999999999999999999999
Q ss_pred cceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 460 KKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+.|||||||..||++||.+||.+|++.++++++.++|+.+++||.+.++|+||+|.|||+|..|||||||||+||||+++
T Consensus 425 ~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lK 504 (591)
T KOG0057|consen 425 QSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLK 504 (591)
T ss_pred hheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHH
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 619 (1288)
||+|+++|||||+||.+||+.+.+.+.+...+||+|+|.||++++++||+|+++++|++.+.|+|+||+. +.+.|+++|
T Consensus 505 da~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w 583 (591)
T KOG0057|consen 505 DAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLW 583 (591)
T ss_pred CCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHh
Confidence 9999999999999999999999999999888999999999999999999999999999999999999999 589999998
Q ss_pred HHHh
Q 000777 620 RLQE 623 (1288)
Q Consensus 620 ~~~~ 623 (1288)
..|.
T Consensus 584 ~~~~ 587 (591)
T KOG0057|consen 584 TTQT 587 (591)
T ss_pred cccc
Confidence 7653
No 52
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.5e-77 Score=741.90 Aligned_cols=525 Identities=23% Similarity=0.328 Sum_probs=450.2
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 48 KLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCW 127 (1288)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 127 (1288)
++++|.+++++ .+++.+++.++..++....|+++++++|...... . .......+..++++.++..++.++..++.
T Consensus 3 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (529)
T TIGR02868 3 RILPLLQPRTR-RLVVAILLGALALGSAVALLGVSAWLISRAAEMP---P-VLYLSVAAVAVRAFGIGRAVFRYLERLVG 77 (529)
T ss_pred hHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556555444 3445666666777777788889999998754221 1 00111112222345566778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000777 128 MITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLT 207 (1288)
Q Consensus 128 ~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 207 (1288)
...+.++..++|.+++++++++|.++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.++
T Consensus 78 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 156 (529)
T TIGR02868 78 HDAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAA 156 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999999975 9999999999999999999998888889888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 208 LVMLSSIPLLAMSGGVMAIM-ISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLA 286 (1288)
Q Consensus 208 l~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1288)
+++++.+|++.++...+.++ .++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+....
T Consensus 157 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02868 157 LVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARA 236 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888876666555444 45556667778899999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 000777 287 AGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPE 366 (1288)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~ 366 (1288)
.+....+..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..+..+.++.+|+.++++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~ 316 (529)
T TIGR02868 237 TGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGP 316 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 87777777777777777888999999999999999999998888888889988888899999999999999999987654
Q ss_pred CccCCCC-CcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 000777 367 IDAYDTK-GKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLI 445 (1288)
Q Consensus 367 ~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~ 445 (1288)
.+..... ....++..+.|+++||+|+|+++ +++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i 394 (529)
T TIGR02868 317 RPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTL 394 (529)
T ss_pred cCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 3221111 11111224579999999999742 46999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCCh
Q 000777 446 DGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSG 525 (1288)
Q Consensus 446 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 525 (1288)
||+|++++ .+++|++|+||||+|+||++||+|||++|.|+.++++++++++.+++++++.++|+|+||.+||+|.+|||
T Consensus 395 ~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 473 (529)
T TIGR02868 395 DGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSG 473 (529)
T ss_pred CCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCH
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCc
Q 000777 526 GQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRL 581 (1288)
Q Consensus 526 Gqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 581 (1288)
|||||||||||++++|+|||||||||+||+++|+.+++.++++.+++|+|+||||+
T Consensus 474 GQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 474 GERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999988899999999996
No 53
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.9e-77 Score=807.88 Aligned_cols=569 Identities=20% Similarity=0.277 Sum_probs=464.7
Q ss_pred CCccHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 000777 42 ESVPFYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASF 121 (1288)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 121 (1288)
+.+.+..|+.|++...+...++.+++.++..++....+++++.+.+........ .....+..+|++++++..++.+
T Consensus 948 g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~----~~~~~~~~iy~~l~i~~~~~~~ 1023 (1522)
T TIGR00957 948 GQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQ----NNTSLRLSVYGALGILQGFAVF 1023 (1522)
T ss_pred CcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC----CCcchHHHHHHHHHHHHHHHHH
Confidence 344566666666543333323333333444445555666777766532111011 1111234466777888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 122 LQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFI 201 (1288)
Q Consensus 122 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 201 (1288)
+..++..+.+.++..++|..++++++++|++|||++ ++|+++||+++|++.++..++..+..++..++.+++.++++++
T Consensus 1024 ~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~ 1102 (1522)
T TIGR00957 1024 GYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILL 1102 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999999999999999975 9999999999999999999999999999999999999988888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 000777 202 KGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGV 281 (1288)
Q Consensus 202 ~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 281 (1288)
.+|.++++++.++++++++..++.+..+...+......++..+++.|+++|+++||+|++|+++.+++.+..+...+...
T Consensus 1103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~ 1182 (1522)
T TIGR00957 1103 ATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYY 1182 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88877666666666666666666666666666666778889999999999999999999999999998888877766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 282 QEGLAAGIGLGMVMLIVFCSYALSVWYGGKLIL-EEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFET 360 (1288)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 360 (1288)
.......+......++.. .++++.|...+. .+.+++|.+..++.+......++..+...+..+..++.+++|+.++
T Consensus 1183 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~ 1259 (1522)
T TIGR00957 1183 PSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEY 1259 (1522)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333333332222221 122333444443 5789999999889889888999999999999999999999999999
Q ss_pred hccCCCCccCCCCC--cccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC
Q 000777 361 INRKPEIDAYDTKG--KILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP 438 (1288)
Q Consensus 361 l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~ 438 (1288)
++.+++.+...... ...++..|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|.|+|+|
T Consensus 1260 ~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1260 SETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred hcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 98766532111111 1123456889999999999743 35799999999999999999999999999999999999999
Q ss_pred CCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccC
Q 000777 439 QAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGE 518 (1288)
Q Consensus 439 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~ 518 (1288)
++|+|.+||+|+++++.+++|++|+||||||.||+|||||||... .++++++++++++.+++++++.++|+||||.+||
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~-~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e 1417 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPF-SQYSDEEVWWALELAHLKTFVSALPDKLDHECAE 1417 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcc-cCCCHHHHHHHHHHcCcHHHHhhCccCCCceecC
Confidence 999999999999999999999999999999999999999999833 2588999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 519 HGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKI 598 (1288)
Q Consensus 519 ~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 598 (1288)
+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||||+||++|+|
T Consensus 1418 ~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~I 1497 (1522)
T TIGR00957 1418 GGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEV 1497 (1522)
T ss_pred CCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred eEecChhHHhcCCCchHHHHHHH
Q 000777 599 VEKGTHSKLVEDPEGAYSQLIRL 621 (1288)
Q Consensus 599 ~~~g~~~~l~~~~~~~~~~~~~~ 621 (1288)
+|.|+|+||+++ ++.|+++++.
T Consensus 1498 vE~G~~~eLl~~-~~~f~~l~~~ 1519 (1522)
T TIGR00957 1498 AEFGAPSNLLQQ-RGIFYSMAKD 1519 (1522)
T ss_pred EEECCHHHHHhC-CCHHHHHHHH
Confidence 999999999987 6899998754
No 54
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.6e-76 Score=736.44 Aligned_cols=564 Identities=27% Similarity=0.387 Sum_probs=483.5
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 46 FYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVT 125 (1288)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 125 (1288)
++++++|.+++++ .+++.+++.++..++.++.|++++.++|...... . ....++.+++++++..+..++..+
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~ 78 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKS--D-----VLPTLALWAGFGVFNTIAYVLVAR 78 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--c-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677765544 4456677777788888889999999999764321 1 111122222233444455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000777 126 CWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWL 205 (1288)
Q Consensus 126 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 205 (1288)
+....+.++..++|..++++++++|++||+++ ++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.
T Consensus 79 ~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 157 (585)
T TIGR01192 79 EADRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWR 157 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666666777799999999999999975 89999999999999999999888888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 206 LTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGL 285 (1288)
Q Consensus 206 l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 285 (1288)
+++++++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++.+..++..+...+...
T Consensus 158 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (585)
T TIGR01192 158 LSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLD 237 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888888888888888899999999999999999999999999999999988888777777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 000777 286 AAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKP 365 (1288)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 365 (1288)
..++...+..++..+..++++++|++++.+|.+++|.+++++.++.....|+..+...+..+..+..+.+|+.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~ 317 (585)
T TIGR01192 238 WWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVF 317 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 66666666666666667778889999999999999999999888888888999999999999999999999999998655
Q ss_pred CCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 000777 366 EIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLI 445 (1288)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~ 445 (1288)
+.+... .....+...+.++++||+|+|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 318 ~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 394 (585)
T TIGR01192 318 QREEPA-DAPELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILI 394 (585)
T ss_pred cccCCc-cCCCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEE
Confidence 432111 11111223457999999999973 246899999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCCh
Q 000777 446 DGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSG 525 (1288)
Q Consensus 446 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 525 (1288)
||+++++++.+.+|++++||||+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+|||
T Consensus 395 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSg 474 (585)
T TIGR01192 395 DGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSG 474 (585)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChh
Q 000777 526 GQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 526 Gqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~ 605 (1288)
|||||++|||||+++|++||||||||+||+++++.+.+.|+++.+++|+|+||||++++..||+|++|++|++++.|+|+
T Consensus 475 Gq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 475 GERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999999988889999999999999889999999999999999999
Q ss_pred HHhcCCCchHHHHHHHH
Q 000777 606 KLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 606 ~l~~~~~~~~~~~~~~~ 622 (1288)
+++++ ++.|++++..+
T Consensus 555 ~l~~~-~~~y~~l~~~~ 570 (585)
T TIGR01192 555 ELIQK-DGRFYKLLRRS 570 (585)
T ss_pred HHHHC-CChHHHHHHhC
Confidence 99987 78999988655
No 55
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.9e-76 Score=740.34 Aligned_cols=564 Identities=29% Similarity=0.416 Sum_probs=481.5
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 46 FYKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVT 125 (1288)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 125 (1288)
+++++++.++.+. .+.+.+++.++..++....|++++.++|...... ......+.+++++++..+..++..+
T Consensus 7 ~~~l~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (588)
T PRK13657 7 YARVLQYLGAEKR-LGILLAVANVLLAAATFAEPILFGRIIDAISGKG-------DIFPLLAAWAGFGLFNIIAGVLVAR 78 (588)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666654433 3445555666667777778889999998764321 1112222333334444445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000777 126 CWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWL 205 (1288)
Q Consensus 126 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 205 (1288)
+..+...++..++|.+++++++++|+.+|++. ++|++++|+++|++.+...+...+..++..++.+++.++++++++|.
T Consensus 79 ~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (588)
T PRK13657 79 HADRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWR 157 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666666777899999999999999975 99999999999999999888888888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 206 LTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGL 285 (1288)
Q Consensus 206 l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 285 (1288)
+++++++++|+.+++..++.+..++..++.++..++..+.+.|.++|+++||.|+.++.+.++|.+..++..+...+...
T Consensus 158 l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (588)
T PRK13657 158 LSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLS 237 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888899999999999999999999999999999999998888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 000777 286 AAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKP 365 (1288)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 365 (1288)
..+....+..++..+..++++++|++++.+|.+++|.+++++.++.....|+..+...+..+..+..+.+|+.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~ 317 (588)
T PRK13657 238 WWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVP 317 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 76666666666666677778889999999999999999999988888889999999999999999999999999987654
Q ss_pred CCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 000777 366 EIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLI 445 (1288)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~ 445 (1288)
+.+... .........+.|+++||+|+|++ ++++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|+|.+
T Consensus 318 ~~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i 394 (588)
T PRK13657 318 DVRDPP-GAIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILI 394 (588)
T ss_pred ccCCCC-CCCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEE
Confidence 422111 11111223457999999999973 246999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCCh
Q 000777 446 DGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSG 525 (1288)
Q Consensus 446 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 525 (1288)
||+|+++++.+++|++|+||||+|++|++||+|||+++.|+.++++++.+++.+++++++.++|+|+||.+|++|.+|||
T Consensus 395 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSg 474 (588)
T PRK13657 395 DGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSG 474 (588)
T ss_pred CCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChh
Q 000777 526 GQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 526 Gqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~ 605 (1288)
|||||++||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+|+
T Consensus 475 Gq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~ 554 (588)
T PRK13657 475 GERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFD 554 (588)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999987889999999999999999999999999999999999
Q ss_pred HHhcCCCchHHHHHHHH
Q 000777 606 KLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 606 ~l~~~~~~~~~~~~~~~ 622 (1288)
++++. ++.|.+++..+
T Consensus 555 ~l~~~-~~~y~~l~~~~ 570 (588)
T PRK13657 555 ELVAR-GGRFAALLRAQ 570 (588)
T ss_pred HHHHC-CChHHHHHHHh
Confidence 99987 78899988754
No 56
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-76 Score=738.86 Aligned_cols=544 Identities=25% Similarity=0.372 Sum_probs=474.9
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Q 000777 72 GLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTILRQDV 151 (1288)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~ 151 (1288)
.++..+.|++++.++|...... .. ......++.+++++.++.+++.++..++....+.++..++|..++++++++|+
T Consensus 8 ~~~~~~~p~~~~~iid~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 8 AMLQLIPPKVVGIIVDGVTEQH-MT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCC-cc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 3444566778888888754221 11 11222333445555566777888888888889999999999999999999999
Q ss_pred hhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 152 AFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIA-FIKGWLLTLVMLSSIPLLAMSGGVMAIMISK 230 (1288)
Q Consensus 152 ~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~l~l~~~~~~p~~~~~~~~~~~~~~~ 230 (1288)
++|++. ++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.++.++
T Consensus 85 ~~~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 85 EFYLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 89999999999999999888777777777766666665555 5899999999999999998888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 231 MSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYALSVWYGG 310 (1288)
Q Consensus 231 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 310 (1288)
..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+.....+....+...+..+..++++++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999988888888777777776666666666666777788999
Q ss_pred HHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCcccEEEEeEE
Q 000777 311 KLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIRGDIELRDVY 390 (1288)
Q Consensus 311 ~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~ 390 (1288)
+++.+|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.+++.+... ...+...+.|+++|++
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~ 320 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQ 320 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEE
Confidence 9999999999999999988888889999999999999999999999999998765432211 1112234679999999
Q ss_pred EECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCC
Q 000777 391 FSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPV 470 (1288)
Q Consensus 391 ~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~ 470 (1288)
|+|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.+||+++++++..++|++|+||+|+|+
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999742 4579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 000777 471 LFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEAT 550 (1288)
Q Consensus 471 l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpt 550 (1288)
+|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+||||||||++||||++++|+||||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHHHHHhh
Q 000777 551 SALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQEA 624 (1288)
Q Consensus 551 s~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 624 (1288)
|+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|++++++ ++.|++++..+..
T Consensus 480 s~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 480 SAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999998888999999999999999999999999999999999999987 6899999876643
No 57
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.5e-79 Score=709.27 Aligned_cols=484 Identities=29% Similarity=0.450 Sum_probs=378.3
Q ss_pred cEEEEeEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC----CcEEEECCeeCCCCCHHH
Q 000777 383 DIELRDVYFSYPARPN-EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ----AGEVLIDGINLKEFQLQW 457 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~----~G~i~~~g~~~~~~~~~~ 457 (1288)
-++++|++..|....+ .++++||||++.+||++||||+|||||||+.+.|.|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975432 25999999999999999999999999999999999999987 899999999998888765
Q ss_pred H---h-cceEEEcCCCC-CCc--hhHHHHHhc----CCCCCCH---HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCC
Q 000777 458 I---R-KKIGLVSQEPV-LFT--GSIKDNIAY----GKDDATT---EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQL 523 (1288)
Q Consensus 458 ~---r-~~i~~v~Q~~~-l~~--~ti~~ni~~----~~~~~~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 523 (1288)
+ | +.|+||||+|. .+| .||.+-|.- ......+ ++..+.++.++ +|+-... ...+.+|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vg-------l~~~~~~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVG-------LPDPERR--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcC-------CCChhhh--ccCCccc
Confidence 4 3 68999999985 444 355555542 1111111 12222222222 3322111 4578899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeE
Q 000777 524 SGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVE 600 (1288)
Q Consensus 524 SgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~ 600 (1288)
|||||||+.||+||+.+|++||+||||++||+.++..|.+.|+++.+ +.++|+|||++..+.+ ||||+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999873 6799999999999987 99999999999999
Q ss_pred ecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCC
Q 000777 601 KGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPS 680 (1288)
Q Consensus 601 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1288)
.|+.+++++++...|.+..-... +
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~a~-------------------------------------------p------------- 259 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLAAV-------------------------------------------P------------- 259 (539)
T ss_pred ecCHHHHHhccCCcccHHHHhhC-------------------------------------------C-------------
Confidence 99999999987766654221000 0
Q ss_pred CCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhch
Q 000777 681 GQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDS 760 (1288)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (1288)
. .... ...
T Consensus 260 -----------~-~~~~-~~~----------------------------------------------------------- 267 (539)
T COG1123 260 -----------R-LGDE-KII----------------------------------------------------------- 267 (539)
T ss_pred -----------C-cccc-ccc-----------------------------------------------------------
Confidence 0 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHH
Q 000777 761 RFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDA 840 (1288)
Q Consensus 761 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~ 840 (1288)
.
T Consensus 268 -------------------------------------------------------~------------------------ 268 (539)
T COG1123 268 -------------------------------------------------------R------------------------ 268 (539)
T ss_pred -------------------------------------------------------c------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhch
Q 000777 841 LARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCA 920 (1288)
Q Consensus 841 l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~ 920 (1288)
T Consensus 269 -------------------------------------------------------------------------------- 268 (539)
T COG1123 269 -------------------------------------------------------------------------------- 268 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000777 921 EEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSS 1000 (1288)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1288)
T Consensus 269 -------------------------------------------------------------------------------- 268 (539)
T COG1123 269 -------------------------------------------------------------------------------- 268 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCC--------CCcccccceeEEEeCCc
Q 000777 1001 SFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSR--------PDVQVFRDLNLKIRAGK 1072 (1288)
Q Consensus 1001 ~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~--------~~~~vL~~vsl~I~~Ge 1072 (1288)
.+..... ....-++++||+.+|..+ ....+++||||+|++||
T Consensus 269 ---------------------~~~~~~~---------~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE 318 (539)
T COG1123 269 ---------------------LPRRGPL---------RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGE 318 (539)
T ss_pred ---------------------ccccccc---------ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCC
Confidence 0000000 001237899999999742 12468999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCee--ccCCCHHHHhcceEEEccCCCCc---hhhHHHHHhcC--CCC
Q 000777 1073 TVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVE--IQKLQLKWLRQQMGLVSQEPVLF---NDTIRANIAYG--KGG 1145 (1288)
Q Consensus 1073 ~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d--i~~i~~~~lR~~i~~V~Qd~~Lf---~gTIreNl~~g--~~~ 1145 (1288)
++||||+||||||||.++|+|+.+|++|+|.++|.| .+.-+...+|+++.+|+|||+-. ..||+++|.-- ...
T Consensus 319 ~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~ 398 (539)
T COG1123 319 TLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHG 398 (539)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhc
Confidence 999999999999999999999999999999999977 33334667889999999999632 57999998621 011
Q ss_pred C----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHH
Q 000777 1146 D----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVV 1221 (1288)
Q Consensus 1146 ~----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I 1221 (1288)
. ...+.+.+.++.+++..- .+......||||||||+||||||..+|++||+|||||+||+-+...|
T Consensus 399 ~~~~~~~~~rv~~ll~~VgL~~~----------~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~V 468 (539)
T COG1123 399 GGSGAERRARVAELLELVGLPPE----------FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQV 468 (539)
T ss_pred ccchHHHHHHHHHHHHHcCCCHH----------HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHH
Confidence 1 112345566777766531 24456778999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHHh
Q 000777 1222 QDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALH 1282 (1288)
Q Consensus 1222 ~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~ 1282 (1288)
.+.|+++.+ +.|.|+|||+++.++. ||||+||++|+|||.|+.+++.+++...|.+.....
T Consensus 469 lnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~a 532 (539)
T COG1123 469 LNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLAA 532 (539)
T ss_pred HHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHHh
Confidence 999988764 5899999999999987 999999999999999999999999999998876543
No 58
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-77 Score=761.34 Aligned_cols=571 Identities=22% Similarity=0.321 Sum_probs=477.5
Q ss_pred cccCCccHHHHHHhhchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHH
Q 000777 39 EKTESVPFYKLFTFADSA-DTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSG 117 (1288)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 117 (1288)
+..+++++..|.+|++.. .+...++.+++.+...++.....+++..+.+.-..... . . .....+.++|.+++++..
T Consensus 796 ~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~-~-~-~~~~~~~~vY~~l~~~~~ 872 (1381)
T KOG0054|consen 796 RETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGT-T-T-VSTSFYLGVYALLGVASS 872 (1381)
T ss_pred HhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-c-C-CCcchHHHHHHHHHHHHH
Confidence 355677788888888763 23333333455555556666666666666554221110 0 0 123356777888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 118 IASFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFL 197 (1288)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i 197 (1288)
++.+++.+.+...+.+++.+||..++++++|.||+|||++ |+|+|+||+++|++.++..++..+..++..++.+++.++
T Consensus 873 ~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtT-P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~ 951 (1381)
T KOG0054|consen 873 LLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTT-PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILV 951 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCC-CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999984 999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHH
Q 000777 198 IAFIKGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAY 277 (1288)
Q Consensus 198 ~~~~~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~ 277 (1288)
++.+..|+..++++.+..+++.+..+|.+-.+...+-....++...+++.|+++|+.|||+|+.|++|.+++....+...
T Consensus 952 vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~ 1031 (1381)
T KOG0054|consen 952 VISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENS 1031 (1381)
T ss_pred HhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhH
Confidence 99999998777666666666666666666666666666667889999999999999999999999999999988877776
Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 278 KSGVQ---EGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAA 354 (1288)
Q Consensus 278 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~ 354 (1288)
+..+- ..+|.++...++..+..+..++...+. ..+..++|.+--.+.+.+.....++.+......+...+.++
T Consensus 1032 ~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~----~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SV 1107 (1381)
T KOG0054|consen 1032 RAFFLSISANRWLAVRLELLGNLVVLIAALFAVLL----PSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSV 1107 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 65443 456666666655444433333322221 12226678777777788888888888888999999999999
Q ss_pred HHHHHHhccCCCCccCCC-C--CcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHH
Q 000777 355 FKMFETINRKPEIDAYDT-K--GKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISL 431 (1288)
Q Consensus 355 ~ri~~~l~~~~~~~~~~~-~--~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~ 431 (1288)
+|+.++.+.++| .+... . .++.|+.+|.|+|+|++.+|.. ..++|||||||+|+|||+|||||++|||||||+++
T Consensus 1108 ERv~eY~~~~~E-~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp-~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~a 1185 (1381)
T KOG0054|consen 1108 ERVLEYTDIPSE-APLEIEESRPPPSWPSKGEIEFEDLSLRYRP-NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILA 1185 (1381)
T ss_pred hHHHHHhcCCCC-CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCC-CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHH
Confidence 999999987666 22211 1 2344667899999999999964 34789999999999999999999999999999999
Q ss_pred HHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCC
Q 000777 432 IERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQG 511 (1288)
Q Consensus 432 l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g 511 (1288)
|.|+.+|.+|+|.|||.|+.++++++||++++++||||.||+||+|.|+. +...++|+++|+|++.|++.+.++++|+|
T Consensus 1186 LFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLD-Pf~e~sD~~IW~ALe~~~Lk~~v~~~p~~ 1264 (1381)
T KOG0054|consen 1186 LFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLD-PFDEYSDDEIWEALERCQLKDVVSSLPGG 1264 (1381)
T ss_pred HHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccC-cccccCHHHHHHHHHHhChHHHHhhCCcC
Confidence 99999999999999999999999999999999999999999999999998 55678999999999999999999999999
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEE
Q 000777 512 IDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIA 591 (1288)
Q Consensus 512 ~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~ 591 (1288)
+|+.|.|+|.|+|-||||.+||||||+++++||+|||+||++|++|+..||++|++..++||||.|+||++++.+||||+
T Consensus 1265 Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVl 1344 (1381)
T KOG0054|consen 1265 LDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVL 1344 (1381)
T ss_pred CCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCEEeEecChhHHhcCCCchHHHHHH
Q 000777 592 VIHRGKIVEKGTHSKLVEDPEGAYSQLIR 620 (1288)
Q Consensus 592 ~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 620 (1288)
|||+|+|+|.|+|.+|++++++.|.++..
T Consensus 1345 Vld~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1345 VLDAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred EeeCCeEeecCChHHHHhCCcchHHHHHH
Confidence 99999999999999999998888875543
No 59
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=6.2e-76 Score=738.19 Aligned_cols=568 Identities=34% Similarity=0.553 Sum_probs=490.4
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 47 YKLFTFADSADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTC 126 (1288)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 126 (1288)
+.+++|.++..+ .+.+.+++.++.+++....|++++.++|......+ .......+.+++++.++..++.+++.++
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (576)
T TIGR02204 7 AALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS----SGLLNRYFAFLLVVALVLALGTAARFYL 81 (576)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555544333 34456666777778888888999999987442211 1122233334445555667778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000777 127 WMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLL 206 (1288)
Q Consensus 127 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 206 (1288)
....+.++..++|..++++++++|.++|++. +.|++++|+++|++.+++.+...+..++..+..+++.++++++++|.+
T Consensus 82 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (576)
T TIGR02204 82 VTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKL 160 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 8999999999999999999999999999875 899999999999999999998888888888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 207 TLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLA 286 (1288)
Q Consensus 207 ~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1288)
++++++.+|+++++..++.+..++..++.++..++..+.+.|.++|+++||.++.|+.+.++|.+..++..+...+....
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (576)
T TIGR02204 161 TSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRT 240 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888988888888888888888888999999999999999999999999999999999999888887777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 000777 287 AGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPE 366 (1288)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~ 366 (1288)
......+..++..+..++++++|++++.+|.++.|.++++..+......|+..+...+..+..+..+.+|+.++++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~ 320 (576)
T TIGR02204 241 RALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPD 320 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 55555555555556666777889999999999999999998888888899999999999999999999999999986554
Q ss_pred CccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEEC
Q 000777 367 IDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLID 446 (1288)
Q Consensus 367 ~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~ 446 (1288)
.+..........+..+.|+++||+|+|+.+.++++|+|+||+++|||+++|+|+||||||||+++|+|+++|++|+|.+|
T Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~ 400 (576)
T TIGR02204 321 IKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLD 400 (576)
T ss_pred CCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEEC
Confidence 22211111111122357999999999975433679999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 447 GINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 447 g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
|.++++++..++|++|+||||+|++|++||+|||.++.|+.++++++++++.+++.++++++|+|++|.+|++|.+||||
T Consensus 401 g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgG 480 (576)
T TIGR02204 401 GVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGG 480 (576)
T ss_pred CEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhH
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~ 606 (1288)
||||++||||++++|++||||||||+||+++++.+.+.++++.+++|+|+||||++.+..||+|++|++|++++.|+|++
T Consensus 481 q~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~ 560 (576)
T TIGR02204 481 QRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAE 560 (576)
T ss_pred HHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHH
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred HhcCCCchHHHHHHH
Q 000777 607 LVEDPEGAYSQLIRL 621 (1288)
Q Consensus 607 l~~~~~~~~~~~~~~ 621 (1288)
++++ ++.|++++..
T Consensus 561 l~~~-~~~~~~l~~~ 574 (576)
T TIGR02204 561 LIAK-GGLYARLARL 574 (576)
T ss_pred HHHc-CChHHHHHhh
Confidence 9886 7888887754
No 60
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.4e-76 Score=796.30 Aligned_cols=570 Identities=19% Similarity=0.269 Sum_probs=434.1
Q ss_pred cCCccHHHHHHhhchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 000777 41 TESVPFYKLFTFADSADT-ALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIA 119 (1288)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 119 (1288)
.+.+.+..|.+|.+.... +.+++.+++.++..++....+++++.+.+..... . .....+++++++++++..++
T Consensus 896 ~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~--~----~~~~~~~~i~~~l~~~~~i~ 969 (1622)
T PLN03130 896 TGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK--T----HGPLFYNLIYALLSFGQVLV 969 (1622)
T ss_pred cCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC--C----CchhHHHHHHHHHHHHHHHH
Confidence 345566677777654322 2222233333444444445556666666542211 1 11123455577778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 120 SFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIA 199 (1288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 199 (1288)
.+++.+++.+.+.++..++|.+++++++++|++|||++ ++|+++||+++|++.++..++..+..++..++.+++.++++
T Consensus 970 ~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i 1048 (1622)
T PLN03130 970 TLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLI 1048 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999985 99999999999999999999999999999988888888888
Q ss_pred HHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHH
Q 000777 200 FIKGWLLTLVMLSSIPLLAM-SGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYK 278 (1288)
Q Consensus 200 ~~~~~~l~l~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~ 278 (1288)
++++|.. +++++.+++++. +..++.+..++..+......++..+++.|+++|+++||+|++++++.+++.+..+...+
T Consensus 1049 ~~~~~~~-~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~ 1127 (1622)
T PLN03130 1049 GIVSTIS-LWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIR 1127 (1622)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 8888743 322222232222 22333344444444445567788999999999999999999999877776665555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 279 SGVQEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEG-YN-----GGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQA 352 (1288)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~-~~-----~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 352 (1288)
..........+......++ ..+++++.+...+..+. .. .+.+..++.+.+....++..+...+..+..++.
T Consensus 1128 ~~~~~~~~~~wl~~~l~~~---~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~ 1204 (1622)
T PLN03130 1128 FTLVNMSSNRWLAIRLETL---GGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLN 1204 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322211111111111111 11111222223333321 11 122222223344444556666666777889999
Q ss_pred HHHHHHHHhccCCCCccCCCCC--cccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHH
Q 000777 353 AAFKMFETINRKPEIDAYDTKG--KILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVIS 430 (1288)
Q Consensus 353 a~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~ 430 (1288)
+.+|+.++++.+++.+...... .+.++..|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||++
T Consensus 1205 sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~ 1283 (1622)
T PLN03130 1205 AVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLN 1283 (1622)
T ss_pred HHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999998766532211111 1123446889999999999632 357999999999999999999999999999999
Q ss_pred HHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCC
Q 000777 431 LIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQ 510 (1288)
Q Consensus 431 ~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 510 (1288)
+|.|+|+|++|+|.+||+|+++++++++|++|++|||||.||+|||||||.++. +++++++++|++.++++++++++|+
T Consensus 1284 lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~ 1362 (1622)
T PLN03130 1284 ALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSL 1362 (1622)
T ss_pred HHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCcc
Confidence 999999999999999999999999999999999999999999999999999876 5789999999999999999999999
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEE
Q 000777 511 GIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMI 590 (1288)
Q Consensus 511 g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i 590 (1288)
|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||||
T Consensus 1363 GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrI 1442 (1622)
T PLN03130 1363 GLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRI 1442 (1622)
T ss_pred ccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCEEeEecChhHHhcCCCchHHHHHHHHh
Q 000777 591 AVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQE 623 (1288)
Q Consensus 591 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 623 (1288)
+||++|+|+|.|+|+||++++++.|+++++...
T Consensus 1443 lVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1443 LVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred EEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 999999999999999999876789999987543
No 61
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.2e-76 Score=731.03 Aligned_cols=527 Identities=25% Similarity=0.312 Sum_probs=457.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 719 PVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRS 798 (1288)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 798 (1288)
+.+..+++.+++.+++.+..+++++.+++........ ......+.++++++.++..++.+++.++..+.+.++..++|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 3 RALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666777777777888888888876421111 122334455566667778889999999999999999999999
Q ss_pred HHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000777 799 MCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGV 878 (1288)
Q Consensus 799 ~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~ 878 (1288)
++|+++++.|..||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+++++++.+|+.++
T Consensus 82 ~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 82 RLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999998 489999999999999999999999999999999999999999999999999999998888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000777 879 SGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLF 958 (1288)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1288)
+.+...++.+...++......+..+.+.|.++|+++||+|+.|+++.++|.+..++..+...+..........+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777888889999999999999999999999999999999998888877777666655555555555
Q ss_pred HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccC
Q 000777 959 AFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILED 1038 (1288)
Q Consensus 959 ~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~ 1038 (1288)
+...+++.+++..+..|.+++|.++++..+......|+..+......+.++..+.+|+.++++.+++.... . ..++.
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~--~-~~~~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK--A-PVTAA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--c-CCCCC
Confidence 55555555566666799999999999988888899999999999999999999999999999754321111 1 11111
Q ss_pred CCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHh
Q 000777 1039 VKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLR 1118 (1288)
Q Consensus 1039 ~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 1118 (1288)
..+.|+|+||+|+||+. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23579999999999854 34799999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1119 QQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
++++||||||++|++||||||.++. ++++|+++++|++.++++++++++|+||||.+||+|.+|||||||||+||||++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~-~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~ 474 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLAR-PDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFL 474 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccC-CCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999974 467999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEE
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVV 1253 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl 1253 (1288)
++|+|||||||||+||+++|+.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 475 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 475 RDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999999988899999999999999999999986
No 62
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.5e-75 Score=784.47 Aligned_cols=514 Identities=19% Similarity=0.274 Sum_probs=423.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHH
Q 000777 106 AVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKF 185 (1288)
Q Consensus 106 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~ 185 (1288)
+.+|+++.++..++.+++.++....+.+...++|..++++++++|++|||++ ++|+++||+++|++.++..+...+..+
T Consensus 1001 l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~ 1079 (1560)
T PTZ00243 1001 LYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYL 1079 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3344445555555556666666667778889999999999999999999975 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH
Q 000777 186 LQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQA 265 (1288)
Q Consensus 186 ~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~ 265 (1288)
+..++.+++.++++++.+|.+.++++.++.+++.+...+.+..+...+......++..+++.|+++|+++||+|++|+.+
T Consensus 1080 ~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~ 1159 (1560)
T PTZ00243 1080 LQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLV 1159 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHH
Confidence 99999999988888888885443333222233333444555555555556667788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 266 MSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYALSVWYGGK--LILEEGYNGGQVVNVMVAVLTGSMSLGEASPC 343 (1288)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 343 (1288)
.++|.+..+...+...+......+......++..+..+++.+++.. +...+.+++|.+..++.+...+..++..+...
T Consensus 1160 ~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~ 1239 (1560)
T PTZ00243 1160 MQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQ 1239 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888777666554444443333333333332222233322 22344578887777777777888899999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCccCC-------------------------CCCc----ccCCCcccEEEEeEEEECC
Q 000777 344 LSAFGAGQAAAFKMFETINRKPEIDAYD-------------------------TKGK----ILDDIRGDIELRDVYFSYP 394 (1288)
Q Consensus 344 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~-------------------------~~~~----~~~~~~~~i~~~~v~~~y~ 394 (1288)
+..+..++.+.+|+.++++..|+.+... .... +.++..|.|+|+||+|+|+
T Consensus 1240 ~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~ 1319 (1560)
T PTZ00243 1240 VATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYR 1319 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeC
Confidence 9999999999999999997543321000 0000 1112357899999999996
Q ss_pred CCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCch
Q 000777 395 ARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTG 474 (1288)
Q Consensus 395 ~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ 474 (1288)
+. .+++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||.||+|
T Consensus 1320 ~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~g 1398 (1560)
T PTZ00243 1320 EG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDG 1398 (1560)
T ss_pred CC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccc
Confidence 42 35699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCCCCCC
Q 000777 475 SIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD-PRILLLDEATSAL 553 (1288)
Q Consensus 475 ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~-~~illlDEpts~l 553 (1288)
||||||..+ .+++++++++|++.+++++++.++|+|+||.+||+|.+|||||||||||||||+++ |+|||||||||+|
T Consensus 1399 TIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaL 1477 (1560)
T PTZ00243 1399 TVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANI 1477 (1560)
T ss_pred cHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccC
Confidence 999999865 46889999999999999999999999999999999999999999999999999996 8999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHHHHH
Q 000777 554 DAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQ 622 (1288)
Q Consensus 554 D~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 622 (1288)
|+++++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++.+
T Consensus 1478 D~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1478 DPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 999999999999999889999999999999999999999999999999999999987688999998654
No 63
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-75 Score=658.29 Aligned_cols=506 Identities=23% Similarity=0.358 Sum_probs=437.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000777 108 KFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQ 187 (1288)
Q Consensus 108 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 187 (1288)
..=++++++.+..|...+..+....++..++|.++|+++...+..-... .++||+++|+..|++.++..+-..+.+++.
T Consensus 63 ~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r-~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~ 141 (573)
T COG4987 63 GVRGLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR-YRSGDLLNRLVADVDALDNLYLRVIAPAVV 141 (573)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh-cChHhHHHHHHhhHHHHhhHHHHHHhhHHH
Confidence 3456788899999999999999999999999999999999999888876 489999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Q 000777 188 LMATFLGGFLIAFIKGWLLTLVMLSSIPLL-AMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAM 266 (1288)
Q Consensus 188 ~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~ 266 (1288)
.+..+++..+..-+++|.+++.+...+.+. +++...+.++-++..++.....+...+.+.|.+.|....+.||.++.+.
T Consensus 142 a~~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~ 221 (573)
T COG4987 142 ALVLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYR 221 (573)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHH
Confidence 888888777777788888877555444443 4445556666677777777888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000777 267 SNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYA-LSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEAS-PCL 344 (1288)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~-~~~ 344 (1288)
..+........+...+...+.++......++.....+ ..+|.+ -.+..|..+......+++.++....++..+. ..+
T Consensus 222 ~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a-~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~ 300 (573)
T COG4987 222 TALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMA-AQVGAGALAQPGAALALLVIFAALEAFEPLAPGAF 300 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhH
Confidence 9999888888888888888888777777666555554 444544 3455666664444444444444555555555 456
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCc
Q 000777 345 SAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSG 424 (1288)
Q Consensus 345 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsG 424 (1288)
....+...++.|+.++++++|+...++. . .+.....++++||+|+||++ ++++|+|+||++++||++||+|+||||
T Consensus 301 ~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~-~--~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsG 376 (573)
T COG4987 301 QHLGQVIASARRLNDILDQKPEVTFPDE-Q--TATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSG 376 (573)
T ss_pred HHhhHHHHHHHHHhhhccCCcccCCCcc-c--cCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCC
Confidence 7888999999999999998887544311 1 11111279999999999864 568999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHH
Q 000777 425 KSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKF 504 (1288)
Q Consensus 425 KSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~ 504 (1288)
||||+++|.|.|+|++|+|.++|.++..++.+.+|+.|++++|.+++|++|+|||+.+++|++++|+++++++.++++++
T Consensus 377 KSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l 456 (573)
T COG4987 377 KSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKL 456 (573)
T ss_pred HHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhh
Q 000777 505 IDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTV 584 (1288)
Q Consensus 505 i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~ 584 (1288)
+++.|+|++|.+||.|..||||||||+||||+|++|++++||||||.+||+.||+.+.+.+.+..++||+|+||||+..+
T Consensus 457 ~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~l 536 (573)
T COG4987 457 LESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGL 536 (573)
T ss_pred HHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHHH
Q 000777 585 RNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIR 620 (1288)
Q Consensus 585 ~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 620 (1288)
+.||||+||++|+++++|+|++|+.+ ++.|.++++
T Consensus 537 e~~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 537 ERMDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred hhcCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 99999999999999999999999996 899988764
No 64
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.1e-74 Score=718.81 Aligned_cols=538 Identities=21% Similarity=0.295 Sum_probs=461.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 717 EIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRI 796 (1288)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 796 (1288)
+++.++..++.+++..++....++++..+++......+ ......+..+++++.++..++.+++.++..+.+.++..++
T Consensus 4 ~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 4 NKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS--VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666667777888888876652211 1122334445555666778888999999999999999999
Q ss_pred HHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000777 797 RSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGD-ALARIVQNISTAAAGLIIAFTASWQLALIILVMLPL 875 (1288)
Q Consensus 797 r~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l 875 (1288)
|.++|+++++.|+.. .+...+++++|++.++..+.. .+..++..++.+ +.++++++++|++++++++.+|+
T Consensus 82 r~~~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~l~li~l~~~~l 153 (544)
T TIGR01842 82 NQPIFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMP-IYLLVCFLLHPWIGILALGGAVV 153 (544)
T ss_pred HHHHHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999843 255688999999999998877 444444444444 44567889999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000777 876 IGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFF 955 (1288)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1288)
++++.++..+..++..++..+..++..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+.....+....+..+
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (544)
T TIGR01842 154 LVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKY 233 (544)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777778888889999999999999999999999999999999999888888877777777777777
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCcc
Q 000777 956 LLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTI 1035 (1288)
Q Consensus 956 ~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~ 1035 (1288)
+..+..++++++|++++..|.+++|.++++..+...+..|+..+......+..+..+.+|+.++++.+++.... ..
T Consensus 234 ~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~ 309 (544)
T TIGR01842 234 FRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CC
Confidence 77777778889999999999999999999999999999999999999999999999999999999765442211 11
Q ss_pred ccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH
Q 000777 1036 LEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK 1115 (1288)
Q Consensus 1036 ~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~ 1115 (1288)
.+...+.|+++||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+
T Consensus 310 ~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~ 388 (544)
T TIGR01842 310 LPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRE 388 (544)
T ss_pred CCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHH
Confidence 12234679999999999753 35799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1116 WLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
.+|++++||||||.+|++|++|||.++. +++++++++++++.++++++++++|+|+||.+|++|.+|||||||||+|||
T Consensus 389 ~~~~~i~~v~q~~~lf~~ti~~Ni~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lAR 467 (544)
T TIGR01842 389 TFGKHIGYLPQDVELFPGTVAENIARFG-ENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALAR 467 (544)
T ss_pred HHhhheEEecCCcccccccHHHHHhccC-CCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999763 368999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|++++|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||+++
T Consensus 468 all~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 468 ALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred HHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 9999999999999999999999999999999875 68999999999999999999999999999999999999863
No 65
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=9.7e-75 Score=718.78 Aligned_cols=525 Identities=24% Similarity=0.341 Sum_probs=457.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 61 MIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRG 140 (1288)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~ 140 (1288)
+.+++++.++.+++.+..|++.++++|....... ....+..+++.+++++++..++.+++.++....+.++..++|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGE---PLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666777778888889999999997631111 1122334455566677788899999999999999999999999
Q ss_pred HHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000777 141 LYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMS 220 (1288)
Q Consensus 141 ~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~ 220 (1288)
.++++++++|..+|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.+++++++.+|+..++
T Consensus 82 ~l~~~l~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~ 160 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIF 160 (529)
T ss_pred HHHHHHHhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999975 99999999999999999999888888888888888888999999999999999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 221 GGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFC 300 (1288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1288)
..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..........+..++..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02857 161 MILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATL 240 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888888888999999999999999999999999999999999988888777776666665555555554444
Q ss_pred HHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCC
Q 000777 301 SYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDI 380 (1288)
Q Consensus 301 ~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 380 (1288)
..++++.++++.+..|.++.|.+++++.+......|+..+...+..+..+..+++|+.++++.+++.... .......
T Consensus 241 ~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~---~~~~~~~ 317 (529)
T TIGR02857 241 SVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK---APVTAAP 317 (529)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---cCCCCCC
Confidence 4444445666677799999999998888888888899999999999999999999999999854332111 1111112
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhc
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRK 460 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~ 460 (1288)
.+.|+++||+|+|++. ++++|+|+||+|+|||+++||||||||||||+++|+|+++|++|+|.+||+|+++++.+++|+
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 3579999999999743 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 461 KIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
+|+||+|+|++|++||+|||.++.++.++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEE
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVI 593 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l 593 (1288)
|+|+|||||||+||+++++.+++.++++.+++|+|+||||+++++.||+|++|
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999988899999999999999999999985
No 66
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.8e-75 Score=785.24 Aligned_cols=570 Identities=19% Similarity=0.263 Sum_probs=433.7
Q ss_pred cCCccHHHHHHhhchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 000777 41 TESVPFYKLFTFADSADT-ALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIA 119 (1288)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 119 (1288)
.+.+.+..|++|.+.... +.+++.+++.++..++.....+++..+.+.... .. .....++.+|++++++..++
T Consensus 893 ~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~--~~----~~~~~~l~~y~~l~~~~~~~ 966 (1495)
T PLN03232 893 TGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP--KS----YSPGFYIVVYALLGFGQVAV 966 (1495)
T ss_pred cCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--CC----CCcchHHHHHHHHHHHHHHH
Confidence 344566677777755322 222222333333333333333444444332110 00 11234566677888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 120 SFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIA 199 (1288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 199 (1288)
.+++.++..+.+.++..++|.+++++++++|++|||++ ++|+++||+++|++.+++.+...+..++..++.+++.++++
T Consensus 967 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~ 1045 (1495)
T PLN03232 967 TFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALI 1045 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999975 99999999999999999999998888888888888888887
Q ss_pred HHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHH
Q 000777 200 FIKGWLLTLVMLSSIPLLAMSG-GVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYK 278 (1288)
Q Consensus 200 ~~~~~~l~l~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~ 278 (1288)
++++|.. +++++.+++++.+. .++.+..++..+......++..+++.|+++|+++||+|++++++.+++.+..+...+
T Consensus 1046 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~ 1124 (1495)
T PLN03232 1046 GTVSTIS-LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIR 1124 (1495)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 7777533 22222222222222 223333344555556677888999999999999999999999887777666555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 279 SGVQEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILE-EGYN-----GGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQA 352 (1288)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~-~~~~-----~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 352 (1288)
..........+....... +..+++++.|...+.. +.+. .+.+..++.+......++..+...+..+..++.
T Consensus 1125 ~~~~~~~~~~wl~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 1201 (1495)
T PLN03232 1125 FTLANTSSNRWLTIRLET---LGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLN 1201 (1495)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433222111111111111 1111222223333332 2221 111222334445555677788888899999999
Q ss_pred HHHHHHHHhccCCCCccCCCCC--cccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHH
Q 000777 353 AAFKMFETINRKPEIDAYDTKG--KILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVIS 430 (1288)
Q Consensus 353 a~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~ 430 (1288)
+.+|+.++++.+++.+...... .+.++..|.|+|+||+|+|+++ .+++|+|+||+|+|||++|||||||||||||++
T Consensus 1202 s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~ 1280 (1495)
T PLN03232 1202 SVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLN 1280 (1495)
T ss_pred HHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999998766533211111 1123445789999999999532 357999999999999999999999999999999
Q ss_pred HHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCC
Q 000777 431 LIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQ 510 (1288)
Q Consensus 431 ~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 510 (1288)
+|.|+++|++|+|.+||+|+++++.+++|++|+||||||.||+|||||||.++. ++++++++++++.++++++++++|+
T Consensus 1281 lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~ 1359 (1495)
T PLN03232 1281 ALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPF 1359 (1495)
T ss_pred HHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcC
Confidence 999999999999999999999999999999999999999999999999999875 6889999999999999999999999
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEE
Q 000777 511 GIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMI 590 (1288)
Q Consensus 511 g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i 590 (1288)
|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|
T Consensus 1360 GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrI 1439 (1495)
T PLN03232 1360 GLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKI 1439 (1495)
T ss_pred CCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred EEEeCCEEeEecChhHHhcCCCchHHHHHHHHh
Q 000777 591 AVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQE 623 (1288)
Q Consensus 591 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 623 (1288)
+||++|+|+|.|+|+||++++++.|+++++.+.
T Consensus 1440 lVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~ 1472 (1495)
T PLN03232 1440 LVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTG 1472 (1495)
T ss_pred EEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 999999999999999999886679999986543
No 67
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.8e-73 Score=703.34 Aligned_cols=532 Identities=22% Similarity=0.296 Sum_probs=457.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 62 IIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGL 141 (1288)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~ 141 (1288)
+..+++.++..++..+.|++++.++|......+ ...+..+++.++++.++..++.+++.++....+.++..++|.+
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 84 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS----VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQP 84 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666667778899999987653211 1223334444555667778889999999999999999999999
Q ss_pred HHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000777 142 YLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGE-KVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMS 220 (1288)
Q Consensus 142 ~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~ 220 (1288)
++++++++|+. ..+...+++++|++.+++.+.. .+..++..++.++ .++++++++|.+++++++.+|+++++
T Consensus 85 ~~~~ll~~~~~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i 157 (544)
T TIGR01842 85 IFAASFSATLR------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGL 157 (544)
T ss_pred HHHHHhcCccc------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999983 2356788999999999998876 4555555555444 44678999999999988888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 221 GGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFC 300 (1288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1288)
..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+....+..++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (544)
T TIGR01842 158 ALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIV 237 (544)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777877888888888999999999999999999999999999999999998888887777777776666666666666
Q ss_pred HHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCC
Q 000777 301 SYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDI 380 (1288)
Q Consensus 301 ~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 380 (1288)
..++++++|++++.+|.+++|.+++++.++.....|+..+...+..+..+..+.+|+.++++.+++.+.. ...+..
T Consensus 238 ~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~~ 313 (544)
T TIGR01842 238 LQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPLPEP 313 (544)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCCCCC
Confidence 6667788999999999999999999998888889999999999999999999999999999765543211 111223
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhc
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRK 460 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~ 460 (1288)
.+.++++||+|+|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+++.+++|+
T Consensus 314 ~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~ 392 (544)
T TIGR01842 314 EGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGK 392 (544)
T ss_pred CCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhh
Confidence 4679999999999742 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 461 KIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
.++||||+|++|++|++|||.++.++.++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||++++
T Consensus 393 ~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~ 472 (544)
T TIGR01842 393 HIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGD 472 (544)
T ss_pred heEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999987777889999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhc
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
|++||||||||+||+++++.+.+.++++. +++|+|+||||++.+..||+|++|++|++++.|+|+++++
T Consensus 473 ~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 473 PKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999885 5799999999999988899999999999999999999865
No 68
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-74 Score=723.09 Aligned_cols=504 Identities=27% Similarity=0.408 Sum_probs=372.7
Q ss_pred ccEEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCC---------
Q 000777 382 GDIELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLK--------- 451 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~--------- 451 (1288)
..|+++|++++|+... +.++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|+++.
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3599999999996321 347999999999999999999999999999999999999999999999997552
Q ss_pred -CCCHH---HHh-cceEEEcCCC--CCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCcc---cccc
Q 000777 452 -EFQLQ---WIR-KKIGLVSQEP--VLFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGID---TLVG 517 (1288)
Q Consensus 452 -~~~~~---~~r-~~i~~v~Q~~--~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~ 517 (1288)
..+.. .+| ++||||+|+| .++. .||+|||.++.. ..+..+..+ .+.+.++.+ |+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~ 163 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV-----EAKRMLDQV--RIPEAQTILS 163 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChhhHHh
Confidence 22322 233 5799999998 5665 599999987531 122222111 122334444 442 3466
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEe
Q 000777 518 EHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIH 594 (1288)
Q Consensus 518 ~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~ 594 (1288)
....+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.++++.+ ++|+|+|||+++.+.. ||||++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 77889999999999999999999999999999999999999999999999853 6899999999999876 99999999
Q ss_pred CCEEeEecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCccccc
Q 000777 595 RGKIVEKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISV 674 (1288)
Q Consensus 595 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1288)
+|++++.|++++++..+...|..-... . . .. . .
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~~~~l~~--~-~--~~-----------------------~---------------~---- 276 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPYTRALLA--A-V--PQ-----------------------L---------------G---- 276 (623)
T ss_pred CCeecccCCHHHhhcCCCChhhhhhhh--c-c--Cc-----------------------c---------------c----
Confidence 999999999988865433222210000 0 0 00 0 0
Q ss_pred ccCCCCCCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 000777 675 SFGLPSGQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPH 754 (1288)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1288)
. ..+. . .+ . ..
T Consensus 277 -------~----~~~~-~---~~-~-~~---------------------------------------------------- 287 (623)
T PRK10261 277 -------A----MKGL-D---YP-R-RF---------------------------------------------------- 287 (623)
T ss_pred -------c----cccc-c---CC-c-cc----------------------------------------------------
Confidence 0 0000 0 00 0 00
Q ss_pred cchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHH
Q 000777 755 ELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVR 834 (1288)
Q Consensus 755 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~ 834 (1288)
+...-+.+.
T Consensus 288 -----------------------------------------------------~~~~~~~~~------------------ 296 (623)
T PRK10261 288 -----------------------------------------------------PLISLEHPA------------------ 296 (623)
T ss_pred -----------------------------------------------------ccccccccc------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000777 835 ALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRT 914 (1288)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~t 914 (1288)
T Consensus 297 -------------------------------------------------------------------------------- 296 (623)
T PRK10261 297 -------------------------------------------------------------------------------- 296 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHH
Q 000777 915 VASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAI 994 (1288)
Q Consensus 915 Ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~ 994 (1288)
T Consensus 297 -------------------------------------------------------------------------------- 296 (623)
T PRK10261 297 -------------------------------------------------------------------------------- 296 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCC--------CcccccceeE
Q 000777 995 GISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRP--------DVQVFRDLNL 1066 (1288)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~--------~~~vL~~vsl 1066 (1288)
...+....... +....-++++||++.|+.+. ..++|+||||
T Consensus 297 -------------------------~~~~~~~~~~~------~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~ 345 (623)
T PRK10261 297 -------------------------KQEPPIEQDTV------VDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSF 345 (623)
T ss_pred -------------------------ccCcccccccc------cCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEe
Confidence 00000000000 00012489999999996311 2369999999
Q ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHhcceEEEccCC--CCch-hhHHHHHh
Q 000777 1067 KIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLRQQMGLVSQEP--VLFN-DTIRANIA 1140 (1288)
Q Consensus 1067 ~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~~i~~V~Qd~--~Lf~-gTIreNl~ 1140 (1288)
+|++||++||||+||||||||+++|+|+.+|++|+|.++|.++...+. ..+|++|+||||+| .++. .|+.+|+.
T Consensus 346 ~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~ 425 (623)
T PRK10261 346 DLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIM 425 (623)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999987654 34678999999998 3664 69999997
Q ss_pred cCC--CCCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 000777 1141 YGK--GGDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALD 1214 (1288)
Q Consensus 1141 ~g~--~~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD 1214 (1288)
+.. ..... .+++.++++..++.+ .........||||||||++|||||+.+|+|||||||||+||
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~L~~~gL~~----------~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD 495 (623)
T PRK10261 426 EPLRVHGLLPGKAAAARVAWLLERVGLLP----------EHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALD 495 (623)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 421 01111 234555666666531 11233456899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcHHHH-HHH
Q 000777 1215 AESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGFYAS-LIA 1280 (1288)
Q Consensus 1215 ~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~-L~~ 1280 (1288)
+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||++|++|+|+|.|++++++.++...|.+ |+.
T Consensus 496 ~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 496 VSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 9999999999988753 6899999999999976 9999999999999999999999876666755 443
No 69
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-74 Score=628.04 Aligned_cols=491 Identities=31% Similarity=0.442 Sum_probs=432.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Q 000777 125 TCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATF-LGGFLIAFIKG 203 (1288)
Q Consensus 125 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 203 (1288)
.++...++.+...+--..|.|++++++.|+-++ .+|.+..-+......|+..+...+...+..++-+ +.++++...++
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 445667777888888889999999999999875 8898877777777677666665555555444433 44456667789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 000777 204 WLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQE 283 (1288)
Q Consensus 204 ~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 283 (1288)
|+.++++++++.++.++......+.....++..++.+++++...+++-+..+||.|+.|+.+..+|.+.++.+.+...+.
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 99999999988888877766666666666667778889999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000777 284 GLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINR 363 (1288)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 363 (1288)
....++....-..+......+....++..+.+|.+|.|+++....++.+...|+..+......+.+++.-.+++++.++.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 66666555555555556666677778888999999999999988889999999999999999999999999999999988
Q ss_pred CCCCccCCCCCcccC-CCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 000777 364 KPEIDAYDTKGKILD-DIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGE 442 (1288)
Q Consensus 364 ~~~~~~~~~~~~~~~-~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 442 (1288)
+.+..+.+. .++.+ ...|.+.|+||+|.|. +.+++|+++||++++|+++|+|||||+||||++++|.|+|++++|.
T Consensus 243 ~~~v~d~pd-a~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 243 EAEVSDAPD-APPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred chhhccCCC-CccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 776554322 22333 3457899999999996 4678999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCC
Q 000777 443 VLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQ 522 (1288)
Q Consensus 443 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 522 (1288)
|.+||+|+++...+.+|+.||+||||..||+.|+..||.+|.|++++++++.+++.++++++|+.+|+||+|.|||+|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 523 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 523 LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
|||||||||||||+++++|+||+|||+||+||.+||+.|+.+|++..+++|.++|+|||+++.+||.|+||++|+|+|.|
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg 479 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERG 479 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCchHHHHHH
Q 000777 603 THSKLVEDPEGAYSQLIR 620 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~~ 620 (1288)
+|+||+.. +|.|++||.
T Consensus 480 ~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 480 THEELLAA-GGLYAEMWR 496 (497)
T ss_pred cHHHHHHc-CChHHHHhc
Confidence 99999998 899999984
No 70
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.2e-73 Score=704.02 Aligned_cols=471 Identities=29% Similarity=0.462 Sum_probs=361.2
Q ss_pred cEEEEeEEEECCCC-CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCCCHH
Q 000777 383 DIELRDVYFSYPAR-PNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEFQLQ 456 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 456 (1288)
.++++|++++|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999631 125799999999999999999999999999999999999986 799999999999876643
Q ss_pred H---Hh-cceEEEcCCCC--CCc-hhHHHHHhcCC---CCCCHHHHHHHHHHcCHHHHHHhCCCCccc---cccCCCCCC
Q 000777 457 W---IR-KKIGLVSQEPV--LFT-GSIKDNIAYGK---DDATTEEIRVATELANAAKFIDKLPQGIDT---LVGEHGTQL 523 (1288)
Q Consensus 457 ~---~r-~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t---~~~~~g~~L 523 (1288)
. +| ++|+||+|+|. ++. .|+++|+.++. ...+.++.. ..+.+.++.+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 2 33 58999999985 443 58999987431 111221111 1122334444 4432 245677899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeE
Q 000777 524 SGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVE 600 (1288)
Q Consensus 524 SgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~ 600 (1288)
|||||||++|||||+.+|++||||||||+||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998753 6899999999999876 99999999999999
Q ss_pred ecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCC
Q 000777 601 KGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPS 680 (1288)
Q Consensus 601 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1288)
.|+++++...+...+.+
T Consensus 238 ~g~~~~~~~~~~~~~~~--------------------------------------------------------------- 254 (529)
T PRK15134 238 QNRAATLFSAPTHPYTQ--------------------------------------------------------------- 254 (529)
T ss_pred eCCHHHHhhCCCCHHHH---------------------------------------------------------------
Confidence 88876654320000000
Q ss_pred CCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhch
Q 000777 681 GQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDS 760 (1288)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (1288)
.
T Consensus 255 -------------------------------------------------------------------~------------ 255 (529)
T PRK15134 255 -------------------------------------------------------------------K------------ 255 (529)
T ss_pred -------------------------------------------------------------------H------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHH
Q 000777 761 RFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDA 840 (1288)
Q Consensus 761 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~ 840 (1288)
++ .. ..
T Consensus 256 ---------------------------------------~~-----------~~-~~----------------------- 261 (529)
T PRK15134 256 ---------------------------------------LL-----------NS-EP----------------------- 261 (529)
T ss_pred ---------------------------------------HH-----------Hh-Cc-----------------------
Confidence 00 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhch
Q 000777 841 LARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCA 920 (1288)
Q Consensus 841 l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~ 920 (1288)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000777 921 EEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSS 1000 (1288)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1288)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCC--------CCcccccceeEEEeCCc
Q 000777 1001 SFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSR--------PDVQVFRDLNLKIRAGK 1072 (1288)
Q Consensus 1001 ~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~--------~~~~vL~~vsl~I~~Ge 1072 (1288)
...+. ... .. ...-|+++||+++|+.. .+.++|+|+||+|++||
T Consensus 262 --------------------~~~~~-~~~-~~------~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge 313 (529)
T PRK15134 262 --------------------SGDPV-PLP-EP------ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGE 313 (529)
T ss_pred --------------------ccccc-ccC-CC------CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCC
Confidence 00000 000 00 01138999999999621 12469999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH---HHhcceEEEccCC--CCch-hhHHHHHhcCCC--
Q 000777 1073 TVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK---WLRQQMGLVSQEP--VLFN-DTIRANIAYGKG-- 1144 (1288)
Q Consensus 1073 ~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~~i~~V~Qd~--~Lf~-gTIreNl~~g~~-- 1144 (1288)
++||+||||||||||+++|+|++ |++|+|++||.++...+.. .+|++++||||++ .+|. .|++||+.++..
T Consensus 314 ~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~ 392 (529)
T PRK15134 314 TLGLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH 392 (529)
T ss_pred EEEEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhc
Confidence 99999999999999999999998 5899999999999776643 3578899999998 3665 699999976410
Q ss_pred -CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHH
Q 000777 1145 -GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESER 1219 (1288)
Q Consensus 1145 -~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~ 1219 (1288)
...+ ++++.++++..++.+ ........+||||||||++|||||+.+|++|||||||++||+.+.+
T Consensus 393 ~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~ 462 (529)
T PRK15134 393 QPTLSAAQREQQVIAVMEEVGLDP----------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQA 462 (529)
T ss_pred cccCChHHHHHHHHHHHHHcCCCH----------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHH
Confidence 0011 233445555555431 1123455689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcHH
Q 000777 1220 VVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGFY 1275 (1288)
Q Consensus 1220 ~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y 1275 (1288)
.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++++.+...|
T Consensus 463 ~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 521 (529)
T PRK15134 463 QILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQQEY 521 (529)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCCChH
Confidence 99999998753 7899999999999875 99999999999999999999987644333
No 71
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-74 Score=704.80 Aligned_cols=463 Identities=22% Similarity=0.369 Sum_probs=359.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC--CCcEEEECCeeCCCCCHHH-Hh
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP--QAGEVLIDGINLKEFQLQW-IR 459 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~r 459 (1288)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 489999999995 34699999999999999999999999999999999999996 8999999999998766543 46
Q ss_pred cceEEEcCCCCCCc-hhHHHHHhcCCCC-----CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 460 KKIGLVSQEPVLFT-GSIKDNIAYGKDD-----ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
+.++||+|++.++. .|++||+.++... .+.++..+ .+.+.++.+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 78999999998875 5999999986431 11111111 123445555 66555677788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCC
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDP 611 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 611 (1288)
||||+.+|+|||||||||+||+.+...+.+.|.++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998875 46899999999999876 999999999999987764432110
Q ss_pred CchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCC
Q 000777 612 EGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEP 691 (1288)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1288)
+..+.
T Consensus 234 -----~~~~~---------------------------------------------------------------------- 238 (506)
T PRK13549 234 -----DIITM---------------------------------------------------------------------- 238 (506)
T ss_pred -----HHHHH----------------------------------------------------------------------
Confidence 00000
Q ss_pred CCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHH
Q 000777 692 AGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALG 771 (1288)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 771 (1288)
T Consensus 239 -------------------------------------------------------------------------------- 238 (506)
T PRK13549 239 -------------------------------------------------------------------------------- 238 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000777 772 AGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTA 851 (1288)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~ 851 (1288)
++..+..
T Consensus 239 ---------------------------------------~~~~~~~---------------------------------- 245 (506)
T PRK13549 239 ---------------------------------------MVGRELT---------------------------------- 245 (506)
T ss_pred ---------------------------------------hhCcCcc----------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHH
Q 000777 852 AAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKK 931 (1288)
Q Consensus 852 ~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~ 931 (1288)
T Consensus 246 -------------------------------------------------------------------------------- 245 (506)
T PRK13549 246 -------------------------------------------------------------------------------- 245 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 932 CEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKS 1011 (1288)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1288)
T Consensus 246 -------------------------------------------------------------------------------- 245 (506)
T PRK13549 246 -------------------------------------------------------------------------------- 245 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000777 1012 AAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLL 1091 (1288)
Q Consensus 1012 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL 1091 (1288)
+ . .+. .... . ...-|+++||+++|+...+.++|+|+||+|++||++||+|+||||||||+++|
T Consensus 246 ---~---~--~~~-~~~~--~------~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i 308 (506)
T PRK13549 246 ---A---L--YPR-EPHT--I------GEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCL 308 (506)
T ss_pred ---c---c--ccc-cccC--C------CCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHH
Confidence 0 0 000 0000 0 01138999999999532234699999999999999999999999999999999
Q ss_pred hccCC-CCCceEEECCeeccCCCH-HHHhcceEEEccCC---CCc-hhhHHHHHhcCCCCC------CCHHHHHHHHHHh
Q 000777 1092 QRFYD-PDAGHITLDGVEIQKLQL-KWLRQQMGLVSQEP---VLF-NDTIRANIAYGKGGD------ATEAEIQAASEMA 1159 (1288)
Q Consensus 1092 ~rl~~-p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qd~---~Lf-~gTIreNl~~g~~~~------~sd~ei~~al~~a 1159 (1288)
+|+++ |++|+|.++|.++...+. +.+|++++||||++ .+| ..|+.||+.++.... .+.++.+ .
T Consensus 309 ~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~ 383 (506)
T PRK13549 309 FGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAEL-----K 383 (506)
T ss_pred hCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHH-----H
Confidence 99998 599999999999865543 45677899999996 355 469999998642100 1111111 1
Q ss_pred chhHHHHhhhccccc-cccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEE
Q 000777 1160 NAHKFICSLQQGYDT-MVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVV 1237 (1288)
Q Consensus 1160 ~l~~~i~~lp~Gldt-~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~I 1237 (1288)
.+.+.++.+ |++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|
T Consensus 384 ~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~ 461 (506)
T PRK13549 384 TILESIQRL--KVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVI 461 (506)
T ss_pred HHHHHHHhc--CccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEE
Confidence 122333332 2321 2344567899999999999999999999999999999999999999999998864 47899999
Q ss_pred ecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1238 AHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1238 aHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
||+++.+.. ||++++|++|+++..|+++++.
T Consensus 462 sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 462 SSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred CCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 999999865 9999999999999999998874
No 72
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.8e-71 Score=748.85 Aligned_cols=505 Identities=19% Similarity=0.270 Sum_probs=412.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000777 109 FVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQL 188 (1288)
Q Consensus 109 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~ 188 (1288)
+++++++..++.+++.+++.+.+.++..++|.++++++++.|++||++. ++|+++||+++|++.++..+...+..++..
T Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~ 1009 (1490)
T TIGR01271 931 YVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQL 1009 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444556777888888889999999999999999999999999975 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHH
Q 000777 189 MATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSN 268 (1288)
Q Consensus 189 ~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~ 268 (1288)
++.+++.++++++++|.++++++.++.+++++..++.+..+...+......++..+++.|++.|+.+||+|++++.+.++
T Consensus 1010 ~~~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~ 1089 (1490)
T TIGR01271 1010 TLIVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETL 1089 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHH
Confidence 99999999999999987655444333333334445555555555556667788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 269 YKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCS--YALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSA 346 (1288)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (1288)
+.+..+...+..........+......++..+. .+++++++.. ..+.|.+..++.+.+.+..++..+...+..
T Consensus 1090 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~ 1164 (1490)
T TIGR01271 1090 FHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSID 1164 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988877654433332222222211111111111 1112222322 234444444445555666677777788888
Q ss_pred HHHHHHHHHHHHHHhccCCCCccCCCC----------------CcccCCCcccEEEEeEEEECCCCCCCcccccceEEEe
Q 000777 347 FGAGQAAAFKMFETINRKPEIDAYDTK----------------GKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISIS 410 (1288)
Q Consensus 347 ~~~~~~a~~ri~~~l~~~~~~~~~~~~----------------~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~ 410 (1288)
+..++.+++|+.++++.+++.+..... .++.++..|.|+|+||+|+|+. ..+++|+|+||+|+
T Consensus 1165 le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~-~~~~vL~~is~~I~ 1243 (1490)
T TIGR01271 1165 VDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTE-AGRAVLQDLSFSVE 1243 (1490)
T ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCC-CCcceeeccEEEEc
Confidence 999999999999999766553211100 0111344578999999999974 24689999999999
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHH
Q 000777 411 SGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTE 490 (1288)
Q Consensus 411 ~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~ 490 (1288)
+||++||||+||||||||+++|+|+++ ++|+|++||+|+++++.+.+|++|+||||+|.||+||||+||... ...+++
T Consensus 1244 ~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~-~~~tde 1321 (1490)
T TIGR01271 1244 GGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPY-EQWSDE 1321 (1490)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcc-cCCCHH
Confidence 999999999999999999999999997 799999999999999999999999999999999999999999854 357899
Q ss_pred HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC
Q 000777 491 EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV 570 (1288)
Q Consensus 491 ~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~ 570 (1288)
+++++++.+++++++.++|+|+||.++++|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+
T Consensus 1322 ei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~ 1401 (1490)
T TIGR01271 1322 EIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFS 1401 (1490)
T ss_pred HHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHHHHHh
Q 000777 571 NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQE 623 (1288)
Q Consensus 571 ~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 623 (1288)
++|+|+||||++++..||+|+||++|+|+|.|+|++|+++ ++.|+++++...
T Consensus 1402 ~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1402 NCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAAD 1453 (1490)
T ss_pred CCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhC
Confidence 9999999999999999999999999999999999999975 789999886543
No 73
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-73 Score=619.65 Aligned_cols=473 Identities=31% Similarity=0.468 Sum_probs=369.3
Q ss_pred cEEEEeEEEECCC-CCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCCCHH
Q 000777 383 DIELRDVYFSYPA-RPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEFQLQ 456 (1288)
Q Consensus 383 ~i~~~~v~~~y~~-~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 456 (1288)
-++++|++..|.. .....++++|||+|.+||++||||+||||||-..+.++|+++- -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4789999988852 2346799999999999999999999999999999999999864 479999999999888877
Q ss_pred HHh----cceEEEcCCCC--CCch-hHH----HHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCC
Q 000777 457 WIR----KKIGLVSQEPV--LFTG-SIK----DNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQ 522 (1288)
Q Consensus 457 ~~r----~~i~~v~Q~~~--l~~~-ti~----~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 522 (1288)
.+| .+|+++||+|. |-.- ||. |-|.+-.. ....+++.+.++.+++.+ -...+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~--------p~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPE--------PEKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCc--------hhhhhhhCCcc
Confidence 765 38999999995 3221 444 44443211 111233444444444322 12235566789
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEe
Q 000777 523 LSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIV 599 (1288)
Q Consensus 523 LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~ 599 (1288)
|||||||||.||.||..+|++||-||||+|||......|.+.|+++.+ +..+++|||+|..+++ ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 999999999999999999999999999999999999999999998864 5799999999999987 9999999999999
Q ss_pred EecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCC
Q 000777 600 EKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLP 679 (1288)
Q Consensus 600 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1288)
|.|+.++++.+|...|.+..-..+... .+
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll~aeP~g---------------------------------------~~------------ 266 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLLAAEPSG---------------------------------------DP------------ 266 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHHhcCCCC---------------------------------------CC------------
Confidence 999999999988888876542110000 00
Q ss_pred CCCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhc
Q 000777 680 SGQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKD 759 (1288)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (1288)
....
T Consensus 267 ------------~p~~---------------------------------------------------------------- 270 (534)
T COG4172 267 ------------PPLP---------------------------------------------------------------- 270 (534)
T ss_pred ------------CCCC----------------------------------------------------------------
Confidence 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHH
Q 000777 760 SRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGD 839 (1288)
Q Consensus 760 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~ 839 (1288)
T Consensus 271 -------------------------------------------------------------------------------- 270 (534)
T COG4172 271 -------------------------------------------------------------------------------- 270 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 000777 840 ALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFC 919 (1288)
Q Consensus 840 ~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~ 919 (1288)
T Consensus 271 -------------------------------------------------------------------------------- 270 (534)
T COG4172 271 -------------------------------------------------------------------------------- 270 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHH
Q 000777 920 AEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQS 999 (1288)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1288)
T Consensus 271 -------------------------------------------------------------------------------- 270 (534)
T COG4172 271 -------------------------------------------------------------------------------- 270 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCC--------CCcccccceeEEEeCC
Q 000777 1000 SSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSR--------PDVQVFRDLNLKIRAG 1071 (1288)
Q Consensus 1000 ~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~--------~~~~vL~~vsl~I~~G 1071 (1288)
.+...-++.+||...||-+ ....++++|||++++|
T Consensus 271 -------------------------------------~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~g 313 (534)
T COG4172 271 -------------------------------------EDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRG 313 (534)
T ss_pred -------------------------------------CCCCceEEecceEEEEecCCccccccchheEEeccceeEecCC
Confidence 0000012222222222210 0124789999999999
Q ss_pred cEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH---HhcceEEEccCCC--Cc-hhhHHHHHhcCC--
Q 000777 1072 KTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW---LRQQMGLVSQEPV--LF-NDTIRANIAYGK-- 1143 (1288)
Q Consensus 1072 e~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR~~i~~V~Qd~~--Lf-~gTIreNl~~g~-- 1143 (1288)
|++||||+||||||||-.+|+|+.+++ |+|.++|.||...+.+. +|+++.+|+|||+ |= ..||.+-|.=|.
T Consensus 314 qTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~v 392 (534)
T COG4172 314 QTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRV 392 (534)
T ss_pred CeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhh
Confidence 999999999999999999999999876 99999999999887655 7899999999996 21 346665554221
Q ss_pred -CCCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHH
Q 000777 1144 -GGDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESE 1218 (1288)
Q Consensus 1144 -~~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te 1218 (1288)
.+.. .++.+.+|++.+|++.-. ...-+..+|||||||||||||++-+|++++||||||+||-.-.
T Consensus 393 h~~~ls~~eR~~rv~~aL~EVGLDp~~----------r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQ 462 (534)
T COG4172 393 HEPKLSAAERDQRVIEALEEVGLDPAT----------RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQ 462 (534)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCChhH----------hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHH
Confidence 1122 355688888888887543 2344678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcHHHHH
Q 000777 1219 RVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGFYASL 1278 (1288)
Q Consensus 1219 ~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1278 (1288)
.+|.+.|+++- .+-+-++|+|+|..++. ||+|+||.+|+|||+|+.++++++|...|-+-
T Consensus 463 aQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 463 AQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred HHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 99999998875 35699999999999986 99999999999999999999999999888653
No 74
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=8.7e-71 Score=683.35 Aligned_cols=533 Identities=18% Similarity=0.177 Sum_probs=434.7
Q ss_pred hHhhhhhcC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 707 TRRLAYLNK-PEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFF 785 (1288)
Q Consensus 707 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 785 (1288)
.+++..+.+ ++++.+..+++.+++.++.....++++..+++.... ... .....++++.++..++.++..++.
T Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 77 (555)
T TIGR01194 5 IGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENF-----LGQ--GSLFSFGGLCLLALLFRIGADIFP 77 (555)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccc--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555666 777777777777777666666666666555442110 000 111223445556677888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000777 786 AVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQL 865 (1288)
Q Consensus 786 ~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 865 (1288)
..++.++..++|.++|++++++|+.||++ +++|++++|+++|++.++.++.. +..++..++.+++.++++++++|.+
T Consensus 78 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L 154 (555)
T TIGR01194 78 AYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPM 154 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999995 88999999999999999998864 7788888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHH--HHHHHHHHHHHHHHHHHHHHH
Q 000777 866 ALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEE--KVMQLYKKKCEAPMKTGIRQG 943 (1288)
Q Consensus 866 ~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 943 (1288)
++++++.+|+.+++.++..++.++...+.++..++..+.+.|.+.|++++|+|+.++ ...+++.+..++..+...+..
T Consensus 155 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (555)
T TIGR01194 155 FAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEI 234 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999988888887777776666666677777788889999999999999999999954 557788888887777666555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000777 944 MVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRE 1023 (1288)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~ 1023 (1288)
........+..++..+...+.++++... |.+++|.+++++.+...+..|+..+......++++..+.+|+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~ 311 (555)
T TIGR01194 235 LIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERF 311 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444333333333333334444444433 7899999999999999999999999999999999999999999997532
Q ss_pred CCCCC----CCCCCc---cccCCCccEEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 000777 1024 SKIDP----SDESGT---ILEDVKGEIELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRF 1094 (1288)
Q Consensus 1024 ~~~~~----~~~~~~---~~~~~~g~I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl 1094 (1288)
.+.++ ++.... ++....+.|+|+||+|+|++.+ .+++|+|+||+|++||++|||||||||||||+++|+|+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~ 391 (555)
T TIGR01194 312 NEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGL 391 (555)
T ss_pred ccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCC
Confidence 11110 000000 1112246799999999997532 23699999999999999999999999999999999999
Q ss_pred CCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccc
Q 000777 1095 YDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDT 1174 (1288)
Q Consensus 1095 ~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt 1174 (1288)
|+|++|+|++||.|+++++.+++|+++++|+|||++|++|+++|+ . +++++++++++++.+++++++.++|+||||
T Consensus 392 ~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t 467 (555)
T TIGR01194 392 YIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--G--EHASLDNAQQYLQRLEIADKVKIEDGGFST 467 (555)
T ss_pred CCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--c--cchhHHHHHHHHHHcCCchhhcccccccCC
Confidence 999999999999999999999999999999999999999999996 2 357899999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHH-H-cCCceEEEEecCchhhhhcCEEEE
Q 000777 1175 MVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDR-V-MKNRTTVVVAHRLSTIKNADMIAV 1252 (1288)
Q Consensus 1175 ~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~-~-~~~~TvI~IaHrl~ti~~~DrI~v 1252 (1288)
. .+|||||||||+||||++++|+|||||||||+||+++|+.+++.+.+ . .+++|+|+||||++++..||+|+|
T Consensus 468 ~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~ 542 (555)
T TIGR01194 468 T-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIK 542 (555)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEE
Confidence 5 68999999999999999999999999999999999999999987643 3 468999999999999999999999
Q ss_pred EeCCEEEEe
Q 000777 1253 VKNGVIVEK 1261 (1288)
Q Consensus 1253 l~~G~Ive~ 1261 (1288)
|++|+|+|.
T Consensus 543 l~~G~i~~~ 551 (555)
T TIGR01194 543 LAAGCIVKD 551 (555)
T ss_pred EECCEEEEe
Confidence 999999975
No 75
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-73 Score=696.36 Aligned_cols=456 Identities=22% Similarity=0.384 Sum_probs=355.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 461 (1288)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 489999999995 346999999999999999999999999999999999999999999999999998777554 3467
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCCC---------CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDDA---------TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~~---------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 531 (1288)
|+||+|++.++. .|++||+.++.... +.++.. ..+.+.++.+ |+.........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 999999998876 59999998763210 111111 1123445555 565556777789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 999999999999999999999999999999999998754 6899999999999976 99999999999998887665421
Q ss_pred CCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCC
Q 000777 610 DPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALG 689 (1288)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1288)
. +..+.. .. . .
T Consensus 235 ~------~~~~~~-------------------------------~~----~---------------------------~- 245 (510)
T PRK09700 235 D------DIVRLM-------------------------------VG----R---------------------------E- 245 (510)
T ss_pred H------HHHHHh-------------------------------cC----C---------------------------C-
Confidence 1 000000 00 0 0
Q ss_pred CCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHH
Q 000777 690 EPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLA 769 (1288)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1288)
.
T Consensus 246 --~----------------------------------------------------------------------------- 246 (510)
T PRK09700 246 --L----------------------------------------------------------------------------- 246 (510)
T ss_pred --c-----------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000777 770 LGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNIS 849 (1288)
Q Consensus 770 l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~ 849 (1288)
.+-+. .
T Consensus 247 ---------------------------------------~~~~~--~--------------------------------- 252 (510)
T PRK09700 247 ---------------------------------------QNRFN--A--------------------------------- 252 (510)
T ss_pred ---------------------------------------ccccc--c---------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHH
Q 000777 850 TAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYK 929 (1288)
Q Consensus 850 ~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~ 929 (1288)
T Consensus 253 -------------------------------------------------------------------------------- 252 (510)
T PRK09700 253 -------------------------------------------------------------------------------- 252 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 930 KKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKA 1009 (1288)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1288)
T Consensus 253 -------------------------------------------------------------------------------- 252 (510)
T PRK09700 253 -------------------------------------------------------------------------------- 252 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHH
Q 000777 1010 KSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVS 1089 (1288)
Q Consensus 1010 ~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~ 1089 (1288)
. .+.. ... . ....|+++|+++.|. .+|+|+||+|++||++||+||||||||||++
T Consensus 253 ----------~-~~~~-~~~--~------~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk 307 (510)
T PRK09700 253 ----------M-KENV-SNL--A------HETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMN 307 (510)
T ss_pred ----------c-cccc-ccC--C------CCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHH
Confidence 0 0000 000 0 011499999999762 2899999999999999999999999999999
Q ss_pred HHhccCCCCCceEEECCeeccCCCH-HHHhcceEEEccCC---CCch-hhHHHHHhcCCCC---------C-CCH----H
Q 000777 1090 LLQRFYDPDAGHITLDGVEIQKLQL-KWLRQQMGLVSQEP---VLFN-DTIRANIAYGKGG---------D-ATE----A 1150 (1288)
Q Consensus 1090 lL~rl~~p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qd~---~Lf~-gTIreNl~~g~~~---------~-~sd----~ 1150 (1288)
+|+|+++|++|+|.++|.++...+. ..+|++++||||++ .+|. -|++||+.++... . ... +
T Consensus 308 ~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (510)
T PRK09700 308 CLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQR 387 (510)
T ss_pred HHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHH
Confidence 9999999999999999999876543 45678999999984 4665 5999999864210 0 011 1
Q ss_pred HHHHHHHHhchhHHHHhhhcccc-ccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc
Q 000777 1151 EIQAASEMANAHKFICSLQQGYD-TMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM 1229 (1288)
Q Consensus 1151 ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~ 1229 (1288)
++.++++..+ +. .........||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++..
T Consensus 388 ~~~~~l~~~~-----------l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~ 456 (510)
T PRK09700 388 TAENQRELLA-----------LKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLA 456 (510)
T ss_pred HHHHHHHhcC-----------CCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHH
Confidence 2333333333 32 12344456799999999999999999999999999999999999999999998864
Q ss_pred -CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhh
Q 000777 1230 -KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1230 -~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
+++|+|+|||+++.+.. ||+|++|++|++++.+++.+
T Consensus 457 ~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 457 DDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 47899999999998865 99999999999999987744
No 76
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.3e-72 Score=692.50 Aligned_cols=452 Identities=22% Similarity=0.373 Sum_probs=353.7
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 461 (1288)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 489999999995 346999999999999999999999999999999999999999999999999987655443 4578
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCC------CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDD------ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
++||+|++.++. .|++||+.++... .+..+..+ .+.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 999999998875 5999999986431 11111111 123445555 565556677789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 999999999999999999999999999999988753 6799999999999876 999999999999887754432110
Q ss_pred chHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCC
Q 000777 613 GAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPA 692 (1288)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1288)
.+.. .
T Consensus 232 ----~~~~------------------~----------------------------------------------------- 236 (501)
T PRK10762 232 ----SLIE------------------M----------------------------------------------------- 236 (501)
T ss_pred ----HHHH------------------H-----------------------------------------------------
Confidence 0000 0
Q ss_pred CCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHH
Q 000777 693 GPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGA 772 (1288)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 772 (1288)
.
T Consensus 237 --------------------------------------------------------~----------------------- 237 (501)
T PRK10762 237 --------------------------------------------------------M----------------------- 237 (501)
T ss_pred --------------------------------------------------------h-----------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 773 GSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAA 852 (1288)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~ 852 (1288)
+.. ..
T Consensus 238 ---------------------------------------~~~-~~----------------------------------- 242 (501)
T PRK10762 238 ---------------------------------------VGR-KL----------------------------------- 242 (501)
T ss_pred ---------------------------------------cCC-Cc-----------------------------------
Confidence 000 00
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHH
Q 000777 853 AGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKC 932 (1288)
Q Consensus 853 ~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~ 932 (1288)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 933 EAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSA 1012 (1288)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1288)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 000777 1013 AASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQ 1092 (1288)
Q Consensus 1013 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~ 1092 (1288)
....+.... .. ....|+++||++ ++|+|+||+|++||++||+||||||||||+++|.
T Consensus 243 -------~~~~~~~~~--~~------~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~ 299 (501)
T PRK10762 243 -------EDQYPRLDK--AP------GEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLY 299 (501)
T ss_pred -------ccccccccc--CC------CCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHh
Confidence 000000000 00 011388999984 2799999999999999999999999999999999
Q ss_pred ccCCCCCceEEECCeeccCCCH-HHHhcceEEEccCC---CCc-hhhHHHHHhcCCCC---C----CC----HHHHHHHH
Q 000777 1093 RFYDPDAGHITLDGVEIQKLQL-KWLRQQMGLVSQEP---VLF-NDTIRANIAYGKGG---D----AT----EAEIQAAS 1156 (1288)
Q Consensus 1093 rl~~p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qd~---~Lf-~gTIreNl~~g~~~---~----~s----d~ei~~al 1156 (1288)
|+++|++|+|.+||.++...+. +.+|++++||||+| .+| ..|++||+.++... . .+ ++++.+++
T Consensus 300 G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 379 (501)
T PRK10762 300 GALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFI 379 (501)
T ss_pred CCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHH
Confidence 9999999999999999977654 34678899999997 344 57999999764210 0 11 12233333
Q ss_pred HHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEE
Q 000777 1157 EMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTV 1235 (1288)
Q Consensus 1157 ~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI 1235 (1288)
+..++. +.........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|
T Consensus 380 ~~~~l~----------~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvi 449 (501)
T PRK10762 380 RLFNIK----------TPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSII 449 (501)
T ss_pred HhcCCC----------CCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEE
Confidence 333321 122445567899999999999999999999999999999999999999999999875 478999
Q ss_pred EEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1236 VVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1236 ~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 450 ivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 450 LVSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred EEcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 99999999865 9999999999999999987764
No 77
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3e-71 Score=620.45 Aligned_cols=530 Identities=23% Similarity=0.288 Sum_probs=468.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000777 727 AAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIH 806 (1288)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~ 806 (1288)
++.+..++....++++-.+.|.+..+. ...+.....++.+++.++..++.+++..++.+++.++..+++..+|...++
T Consensus 31 fS~~INiL~L~~~lyMLQVyDRVL~S~--s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~ 108 (580)
T COG4618 31 FSAVINLLALTGPLYMLQVYDRVLPSR--SVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFS 108 (580)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhccCC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh
Confidence 333344555556666777777776432 122334445555666777888999999999999999999999999999987
Q ss_pred CCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 807 MEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKF 886 (1288)
Q Consensus 807 ~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~ 886 (1288)
.+..- +..|+= ...-+|.++++.+++..-+..+-+.-.+.++++++|.++++++++.++...+++...++-.+.
T Consensus 109 ~~l~~-----~~~g~~-~Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~ 182 (580)
T COG4618 109 APLLR-----RGSGDG-LQPLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERA 182 (580)
T ss_pred hHHhh-----cCCCcc-ccchhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66542 223322 223479999999999888888888888899999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000777 887 MKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFY 966 (1288)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 966 (1288)
.++..++..+.....+.+...+..+.++|++.|+.....++|.+....+.....+..-..+...+++..+-+.....++.
T Consensus 183 t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg 262 (580)
T COG4618 183 TRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLG 262 (580)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888888888888999999999999999999999999999999999999888888888888889999999999999999
Q ss_pred HHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEE
Q 000777 967 AGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELH 1046 (1288)
Q Consensus 967 ~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 1046 (1288)
.|.+++.+|++|.|.+++......-...|+......+..+..+..+.+|+.++++..+...+ .-+.|+.+|.+.++
T Consensus 263 ~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L~Ve 338 (580)
T COG4618 263 LGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGALSVE 338 (580)
T ss_pred cceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCceeeEe
Confidence 99999999999999999998888899999999999999999999999999999987654322 22345567899999
Q ss_pred EEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEcc
Q 000777 1047 HVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQ 1126 (1288)
Q Consensus 1047 nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Q 1126 (1288)
++++.-|+. ++|+|+|+||+++|||-+|||||||||||||.++|.|.++|++|.|.+||.|+++++.+++-++|||.||
T Consensus 339 ~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQ 417 (580)
T COG4618 339 RLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQ 417 (580)
T ss_pred eeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcc
Confidence 999987755 5789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEE
Q 000777 1127 EPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLL 1206 (1288)
Q Consensus 1127 d~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlL 1206 (1288)
|..||+|||+|||+-. .++.+++.|.+|++.|+.||.|.++|+||||.||++|..|||||||||+|||||+.+|.+++|
T Consensus 418 dVeLF~GTIaeNIaRf-~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVL 496 (580)
T COG4618 418 DVELFDGTIAENIARF-GEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVL 496 (580)
T ss_pred cceecCCcHHHHHHhc-cccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEe
Confidence 9999999999999743 247899999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1207 DEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1207 DEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||-|+||.+-|+.+.++|.+.. +++|+|+||||.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 497 DEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 497 DEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999998875 78999999999999999999999999999999999999875
No 78
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.5e-72 Score=695.92 Aligned_cols=458 Identities=24% Similarity=0.466 Sum_probs=351.5
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC--CCCCcEEEEC---------------
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFY--DPQAGEVLID--------------- 446 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~--~~~~G~i~~~--------------- 446 (1288)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 47899999995 246999999999999999999999999999999999996 7999999997
Q ss_pred --------CeeCC-------CCC---HHHHhcceEEEcCC-CCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHH
Q 000777 447 --------GINLK-------EFQ---LQWIRKKIGLVSQE-PVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKF 504 (1288)
Q Consensus 447 --------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~ 504 (1288)
|.++. ..+ ...+|+.++||+|+ +.+|. .|++||+.++... ...++.. ..+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHH
Confidence 33321 111 12456789999998 56775 5999999875321 2222111 112334
Q ss_pred HHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCch
Q 000777 505 IDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLS 582 (1288)
Q Consensus 505 i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~ 582 (1288)
++.+ |++........+|||||||||+|||||+.+|++|||||||++||+.+.+++.+.|+++.+ ++|+|+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 4555 565556677789999999999999999999999999999999999999999999998853 689999999999
Q ss_pred hhhh-cCEEEEEeCCEEeEecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCC
Q 000777 583 TVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRG 661 (1288)
Q Consensus 583 ~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1288)
.+.. ||+|++|++|++++.|+++++... +.
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----~~--------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV----FM--------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH----HH---------------------------------------------
Confidence 9976 999999999999876654433110 00
Q ss_pred CCCCCCCCcccccccCCCCCCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 662 SSIGNSSRHSISVSFGLPSGQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLL 741 (1288)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1288)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhH
Q 000777 742 ISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGA 821 (1288)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~ 821 (1288)
. ..
T Consensus 262 -----------------------------------------------------------------------~--~~---- 264 (520)
T TIGR03269 262 -----------------------------------------------------------------------E--GV---- 264 (520)
T ss_pred -----------------------------------------------------------------------h--hc----
Confidence 0 00
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 822 IGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEA 901 (1288)
Q Consensus 822 l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1288)
.
T Consensus 265 ------------------------------------------------------------------~------------- 265 (520)
T TIGR03269 265 ------------------------------------------------------------------S------------- 265 (520)
T ss_pred ------------------------------------------------------------------h-------------
Confidence 0
Q ss_pred HHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHH
Q 000777 902 SQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSD 981 (1288)
Q Consensus 902 ~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~ 981 (1288)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCC--CCCcc
Q 000777 982 VFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPS--RPDVQ 1059 (1288)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~--~~~~~ 1059 (1288)
+ ...+... + . ...-|+++||+++|++ ....+
T Consensus 266 ---------------------------------~----~~~~~~~-~---~------~~~~l~~~~l~~~~~~~~~~~~~ 298 (520)
T TIGR03269 266 ---------------------------------E----VEKECEV-E---V------GEPIIKVRNVSKRYISVDRGVVK 298 (520)
T ss_pred ---------------------------------h----hcccccc-C---C------CCceEEEeccEEEeccCCCCCce
Confidence 0 0000000 0 0 0114999999999963 11246
Q ss_pred cccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEEC-Ce---eccCCC---HHHHhcceEEEccCCCCch
Q 000777 1060 VFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLD-GV---EIQKLQ---LKWLRQQMGLVSQEPVLFN 1132 (1288)
Q Consensus 1060 vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id-G~---di~~i~---~~~lR~~i~~V~Qd~~Lf~ 1132 (1288)
+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |. ++...+ ...+|++++||||++.+|.
T Consensus 299 il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~ 378 (520)
T TIGR03269 299 AVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYP 378 (520)
T ss_pred EEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCC
Confidence 9999999999999999999999999999999999999999999996 64 333332 2356788999999998886
Q ss_pred -hhHHHHHhcCCCCCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEe
Q 000777 1133 -DTIRANIAYGKGGDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLD 1207 (1288)
Q Consensus 1133 -gTIreNl~~g~~~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLD 1207 (1288)
.|++||+.+...... .++++.++++..++.+.- .+.........||||||||++|||||+.+|+|||||
T Consensus 379 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllD 452 (520)
T TIGR03269 379 HRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK------AEEILDKYPDELSEGERHRVALAQVLIKEPRIVILD 452 (520)
T ss_pred CCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc------chhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999975210011 123445555555553200 000123445689999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1208 EATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1208 EaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 453 EPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 453 EPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999988753 6899999999999876 99999999999999999998865
No 79
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.1e-69 Score=673.50 Aligned_cols=535 Identities=17% Similarity=0.140 Sum_probs=437.6
Q ss_pred ccHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000777 44 VPFYKLFTFAD-SADTALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFL 122 (1288)
Q Consensus 44 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 122 (1288)
...++++++++ +.+ ..+++++++.++.+++....|++++.+++.... ... . ....++++.++.+++.++
T Consensus 3 ~~~~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~----~~~~~~~~~~~~~~~~~~ 72 (555)
T TIGR01194 3 AAIGEILALLRSPFP-AITAFSIALGLAGGLAIIALLASINNAIHEENF--LGQ---G----SLFSFGGLCLLALLFRIG 72 (555)
T ss_pred chHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--ccc---h----HHHHHHHHHHHHHHHHHH
Confidence 34567777776 543 345566667777777777777788777653210 000 1 111234455566788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 123 QVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIK 202 (1288)
Q Consensus 123 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 202 (1288)
+.++....+.++..++|.++++|++++|+.+|++. ++|++++|+++|++.+++.+.. +..++..++++++.+++++++
T Consensus 73 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 150 (555)
T TIGR01194 73 ADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYL 150 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999975 9999999999999999998864 677788888888889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH--HHHHHHHHHHHHHHHHH
Q 000777 203 GWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEK--QAMSNYKKFLVTAYKSG 280 (1288)
Q Consensus 203 ~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~--~~~~~~~~~~~~~~~~~ 280 (1288)
+|.+++++++.+|+.+++..+..++.++...+.++..++.++.+.|.+.|++++|+|+.++ ...+++.+..++..+..
T Consensus 151 ~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (555)
T TIGR01194 151 SVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLH 230 (555)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999988888888777777777777788888889999999999999999999999954 55677877777776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 281 VQEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFET 360 (1288)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 360 (1288)
.+..........+..++..+..++++++|+.. +.++.|.+++++.+......|+..+...+..++.+.++++|+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~l 307 (555)
T TIGR01194 231 IIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADF 307 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65554444444444444444444455555543 689999999999999888999999999999999999999999999
Q ss_pred hccCCC--Ccc--CCCCCc---ccCCCcccEEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHH
Q 000777 361 INRKPE--IDA--YDTKGK---ILDDIRGDIELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISL 431 (1288)
Q Consensus 361 l~~~~~--~~~--~~~~~~---~~~~~~~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~ 431 (1288)
++.+++ ... ...... ++....+.|+++||+|+|++.+ .+++|+|+||++++||+++||||||||||||+++
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~l 387 (555)
T TIGR01194 308 GERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKL 387 (555)
T ss_pred HhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHH
Confidence 753211 110 000000 1112246799999999997432 2369999999999999999999999999999999
Q ss_pred HHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCC
Q 000777 432 IERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQG 511 (1288)
Q Consensus 432 l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g 511 (1288)
|+|+++|++|+|.+||+++++++.+++|++++||+|+|++|++|+++|+ .++.++++++++++.++++++++.+|+|
T Consensus 388 l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g 464 (555)
T TIGR01194 388 FCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGG 464 (555)
T ss_pred HhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccc
Confidence 9999999999999999999999999999999999999999999999995 3567788999999999999999999999
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHH-Hh-cCCceEEEEecCchhhhhcCE
Q 000777 512 IDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALD-RI-MVNRTTVIVAHRLSTVRNADM 589 (1288)
Q Consensus 512 ~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~l~~~~~~d~ 589 (1288)
+||. .+||||||||++||||++++|+|||||||||+||+++++.+++.+. .+ .+++|+|+||||++++..||+
T Consensus 465 ~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~ 539 (555)
T TIGR01194 465 FSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQ 539 (555)
T ss_pred cCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCE
Confidence 9994 7899999999999999999999999999999999999999988764 34 357999999999999989999
Q ss_pred EEEEeCCEEeEe
Q 000777 590 IAVIHRGKIVEK 601 (1288)
Q Consensus 590 i~~l~~G~i~~~ 601 (1288)
|++|++|++++.
T Consensus 540 i~~l~~G~i~~~ 551 (555)
T TIGR01194 540 IIKLAAGCIVKD 551 (555)
T ss_pred EEEEECCEEEEe
Confidence 999999999864
No 80
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-72 Score=686.75 Aligned_cols=454 Identities=22% Similarity=0.352 Sum_probs=351.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH-HHHhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL-QWIRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 461 (1288)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999875543 456788
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCC-----CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDD-----ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
|+||+|++.++. .|++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 999999998886 4999999986421 1111111 1223455555 5554556677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCc
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEG 613 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 613 (1288)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+++..++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 99999999999999999999999999999988753 6899999999999876 99999999999975432100000
Q ss_pred hHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCC
Q 000777 614 AYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAG 693 (1288)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1288)
...+.
T Consensus 230 -~~~~~-------------------------------------------------------------------------- 234 (501)
T PRK11288 230 -RDQLV-------------------------------------------------------------------------- 234 (501)
T ss_pred -HHHHH--------------------------------------------------------------------------
Confidence 00000
Q ss_pred CCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHH
Q 000777 694 PSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAG 773 (1288)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 773 (1288)
T Consensus 235 -------------------------------------------------------------------------------- 234 (501)
T PRK11288 235 -------------------------------------------------------------------------------- 234 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 774 SFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAA 853 (1288)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~ 853 (1288)
+.+ ......
T Consensus 235 ----------------------------~~~-------~~~~~~------------------------------------ 243 (501)
T PRK11288 235 ----------------------------QAM-------VGREIG------------------------------------ 243 (501)
T ss_pred ----------------------------HHh-------cCCCcc------------------------------------
Confidence 000 000000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHH
Q 000777 854 GLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCE 933 (1288)
Q Consensus 854 ~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~ 933 (1288)
T Consensus 244 -------------------------------------------------------------------------------- 243 (501)
T PRK11288 244 -------------------------------------------------------------------------------- 243 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 934 APMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAA 1013 (1288)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1288)
T Consensus 244 -------------------------------------------------------------------------------- 243 (501)
T PRK11288 244 -------------------------------------------------------------------------------- 243 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000777 1014 ASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQR 1093 (1288)
Q Consensus 1014 ~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~r 1093 (1288)
. .....+. .. ....++++|++++ .+++|+||+|++||++||+||||||||||+++|+|
T Consensus 244 -~---~~~~~~~-----~~------~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G 301 (501)
T PRK11288 244 -D---IYGYRPR-----PL------GEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYG 301 (501)
T ss_pred -c---ccccccc-----CC------CCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcC
Confidence 0 0000000 00 0114889999842 38999999999999999999999999999999999
Q ss_pred cCCCCCceEEECCeeccCCC-HHHHhcceEEEccCCC---Cc-hhhHHHHHhcCCCCC-------CCH----HHHHHHHH
Q 000777 1094 FYDPDAGHITLDGVEIQKLQ-LKWLRQQMGLVSQEPV---LF-NDTIRANIAYGKGGD-------ATE----AEIQAASE 1157 (1288)
Q Consensus 1094 l~~p~~G~I~idG~di~~i~-~~~lR~~i~~V~Qd~~---Lf-~gTIreNl~~g~~~~-------~sd----~ei~~al~ 1157 (1288)
+++|++|+|.+||.++...+ ...+|++++|+||++. +| ..|+.||+.++.... ... +++.++++
T Consensus 302 ~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 381 (501)
T PRK11288 302 ATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIR 381 (501)
T ss_pred CCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHH
Confidence 99999999999999986543 3456789999999973 45 589999997642111 011 12333333
Q ss_pred HhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEE
Q 000777 1158 MANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVV 1236 (1288)
Q Consensus 1158 ~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~ 1236 (1288)
..++. +.........||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .+.|+|+
T Consensus 382 ~~~l~----------~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii 451 (501)
T PRK11288 382 SLNIK----------TPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLF 451 (501)
T ss_pred hcCcc----------cCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEE
Confidence 33321 112344456899999999999999999999999999999999999999999998865 4789999
Q ss_pred EecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1237 VAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1237 IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|||+++.+.. ||+|++|++|++++.|+++|..
T Consensus 452 vsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 452 VSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred ECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999965 9999999999999999998765
No 81
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=9.7e-72 Score=685.97 Aligned_cols=458 Identities=21% Similarity=0.345 Sum_probs=351.0
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC--CCcEEEECCeeCCCCCHHH-Hhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP--QAGEVLIDGINLKEFQLQW-IRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~r~ 460 (1288)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 78999999995 24699999999999999999999999999999999999987 7999999999998776544 457
Q ss_pred ceEEEcCCCCCCc-hhHHHHHhcCCCC------CCHHHHHHHHHHcCHHHHHHhCCCCccccc-cCCCCCCChHHHHHHH
Q 000777 461 KIGLVSQEPVLFT-GSIKDNIAYGKDD------ATTEEIRVATELANAAKFIDKLPQGIDTLV-GEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~LSgGqkqri~ 532 (1288)
+|+||||++.++. .|++||+.++... ...++..+ .+.+.++.+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 8999999998875 5999999886421 11111111 223445555 454332 3456789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 99999999999999999999999999999999988754 6799999999999976 999999999999865532211000
Q ss_pred CCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCC
Q 000777 611 PEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGE 690 (1288)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1288)
...
T Consensus 232 ------~~~----------------------------------------------------------------------- 234 (500)
T TIGR02633 232 ------DII----------------------------------------------------------------------- 234 (500)
T ss_pred ------HHH-----------------------------------------------------------------------
Confidence 000
Q ss_pred CCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHH
Q 000777 691 PAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLAL 770 (1288)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 770 (1288)
..+
T Consensus 235 --------------------------------------------------------~~~--------------------- 237 (500)
T TIGR02633 235 --------------------------------------------------------TMM--------------------- 237 (500)
T ss_pred --------------------------------------------------------HHH---------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000777 771 GAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNIST 850 (1288)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~ 850 (1288)
+.. +
T Consensus 238 -----------------------------------------~~~-~---------------------------------- 241 (500)
T TIGR02633 238 -----------------------------------------VGR-E---------------------------------- 241 (500)
T ss_pred -----------------------------------------hCc-c----------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHH
Q 000777 851 AAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKK 930 (1288)
Q Consensus 851 ~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~ 930 (1288)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 931 KCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAK 1010 (1288)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1288)
.
T Consensus 242 ----------------------------------------------~--------------------------------- 242 (500)
T TIGR02633 242 ----------------------------------------------I--------------------------------- 242 (500)
T ss_pred ----------------------------------------------c---------------------------------
Confidence 0
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHH
Q 000777 1011 SAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSL 1090 (1288)
Q Consensus 1011 ~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~l 1090 (1288)
.. ..+. ...+ . .+.-|+++|++++|+...+.++|+|+||+|++||++||+||||||||||+++
T Consensus 243 ------~~--~~~~-~~~~--~------~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~ 305 (500)
T TIGR02633 243 ------TS--LYPH-EPHE--I------GDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQA 305 (500)
T ss_pred ------cc--cccc-cccC--C------CCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHH
Confidence 00 0000 0000 0 0114899999999953213469999999999999999999999999999999
Q ss_pred HhccCCC-CCceEEECCeeccCCC-HHHHhcceEEEccCC---CCch-hhHHHHHhcCCCC------CCC----HHHHHH
Q 000777 1091 LQRFYDP-DAGHITLDGVEIQKLQ-LKWLRQQMGLVSQEP---VLFN-DTIRANIAYGKGG------DAT----EAEIQA 1154 (1288)
Q Consensus 1091 L~rl~~p-~~G~I~idG~di~~i~-~~~lR~~i~~V~Qd~---~Lf~-gTIreNl~~g~~~------~~s----d~ei~~ 1154 (1288)
|+|+++| ++|+|.++|.++...+ ...+|++++||||++ .+|. .|+++|+.++... ... ++++.+
T Consensus 306 l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (500)
T TIGR02633 306 LFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGS 385 (500)
T ss_pred HhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHH
Confidence 9999995 8999999999986544 356788999999996 3554 6999999874210 011 122334
Q ss_pred HHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCce
Q 000777 1155 ASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRT 1233 (1288)
Q Consensus 1155 al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~T 1233 (1288)
+++..++.+ .........||||||||++|||||+.+|++|||||||++||+.+.+.+++.|++.. ++.|
T Consensus 386 ~l~~~~l~~----------~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~t 455 (500)
T TIGR02633 386 AIQRLKVKT----------ASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVA 455 (500)
T ss_pred HHHhcCccC----------CCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCE
Confidence 444433310 11234456899999999999999999999999999999999999999999998864 4789
Q ss_pred EEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1234 TVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1234 vI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
+|+|||+++.+.. ||+|++|++|+++..++.+++
T Consensus 456 viivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 456 IIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred EEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 9999999999976 999999999999988765543
No 82
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.6e-71 Score=681.12 Aligned_cols=466 Identities=23% Similarity=0.394 Sum_probs=356.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHh-cc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIR-KK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r-~~ 461 (1288)
.|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 599999999996 24699999999999999999999999999999999999999999999999999877765544 57
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
++||+|++.++. .|++||+.++.... .+..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASMQ-----KMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHHH-----HHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 999999998886 59999999875321 11111 122344444 555556677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchHHHH
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQL 618 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 618 (1288)
|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++... ..
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------~~ 232 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD------DI 232 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH------HH
Confidence 999999999999999999999999988754 6899999999999876 999999999999999988776431 00
Q ss_pred HHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCCCCCC
Q 000777 619 IRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGPSQPT 698 (1288)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (1288)
.+.... . . . . . . . .
T Consensus 233 ~~~~~~-----~----------------~----------------~-~---------------------~-~-~--~--- 246 (510)
T PRK15439 233 IQAITP-----A----------------A----------------R-E---------------------K-S-L--S--- 246 (510)
T ss_pred HHHHhC-----c----------------c----------------c-c---------------------c-c-c--c---
Confidence 000000 0 0 0 0 0 0 0 0
Q ss_pred cccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHH
Q 000777 699 EEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLS 778 (1288)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 778 (1288)
. . .
T Consensus 247 ~-~----------------------------------------------------~------------------------ 249 (510)
T PRK15439 247 A-S----------------------------------------------------Q------------------------ 249 (510)
T ss_pred c-c----------------------------------------------------c------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 779 PAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIA 858 (1288)
Q Consensus 779 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~ 858 (1288)
+. .+
T Consensus 250 -----------------------------~~-~~---------------------------------------------- 253 (510)
T PRK15439 250 -----------------------------KL-WL---------------------------------------------- 253 (510)
T ss_pred -----------------------------cc-cc----------------------------------------------
Confidence 00 00
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 000777 859 FTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKT 938 (1288)
Q Consensus 859 ~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~ 938 (1288)
T Consensus 254 -------------------------------------------------------------------------------- 253 (510)
T PRK15439 254 -------------------------------------------------------------------------------- 253 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 939 GIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFA 1018 (1288)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~ 1018 (1288)
T Consensus 254 -------------------------------------------------------------------------------- 253 (510)
T PRK15439 254 -------------------------------------------------------------------------------- 253 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC
Q 000777 1019 IIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD 1098 (1288)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~ 1098 (1288)
..+.. ...... .+.-|+++|++. .+|+|+||+|++||++||+||||||||||+++|.|+.+|+
T Consensus 254 --~~~~~-~~~~~~------~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~ 316 (510)
T PRK15439 254 --ELPGN-RRQQAA------GAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPAR 316 (510)
T ss_pred --ccccc-ccccCC------CCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC
Confidence 00000 000000 011389999983 1599999999999999999999999999999999999999
Q ss_pred CceEEECCeeccCCCHHH-HhcceEEEccCC---CCch-hhHHHHHhcCC---CCC-CCHHHHHHHHHHhchhHHHHhhh
Q 000777 1099 AGHITLDGVEIQKLQLKW-LRQQMGLVSQEP---VLFN-DTIRANIAYGK---GGD-ATEAEIQAASEMANAHKFICSLQ 1169 (1288)
Q Consensus 1099 ~G~I~idG~di~~i~~~~-lR~~i~~V~Qd~---~Lf~-gTIreNl~~g~---~~~-~sd~ei~~al~~a~l~~~i~~lp 1169 (1288)
+|+|.++|.++...+... +|++|+||||++ .+|. .|+.+|+.... ... ....+.+ ..+.+++..+
T Consensus 317 ~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~- 390 (510)
T PRK15439 317 GGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN-----AVLERYRRAL- 390 (510)
T ss_pred CcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH-----HHHHHHHHHc-
Confidence 999999999998776554 467899999996 3564 59999985310 000 0111111 1122333332
Q ss_pred cccc-ccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-
Q 000777 1170 QGYD-TMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN- 1246 (1288)
Q Consensus 1170 ~Gld-t~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~- 1246 (1288)
|++ .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+..
T Consensus 391 -~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~ 469 (510)
T PRK15439 391 -NIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQM 469 (510)
T ss_pred -CCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHh
Confidence 332 23445567899999999999999999999999999999999999999999999875 47899999999999976
Q ss_pred cCEEEEEeCCEEEEecChhhhhc
Q 000777 1247 ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1247 ~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
||+|++|++|+++..|+++++..
T Consensus 470 ~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 470 ADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred CCEEEEEECCEEEEEEccccCCH
Confidence 99999999999999999988764
No 83
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.2e-68 Score=705.78 Aligned_cols=220 Identities=23% Similarity=0.448 Sum_probs=189.8
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
..|+++|++++|++ +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. +....|+.
T Consensus 927 ~~L~I~nLsK~y~~-~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecC-CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 46999999999952 23579999999999999999999999999999999999999999999999999964 45667889
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
+|||||++.+|. .||+|||.++.. ..+.++.++ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 999999999886 599999987522 112222111 123445555 6666677788899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
.+|+|+|||||||+||+.+++.+.+.|+++.+++|+|++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999998778999999999999976 999999999999999999998754
No 84
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-70 Score=674.04 Aligned_cols=454 Identities=21% Similarity=0.356 Sum_probs=348.8
Q ss_pred EEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH-HHHhcceEE
Q 000777 386 LRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL-QWIRKKIGL 464 (1288)
Q Consensus 386 ~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~ 464 (1288)
++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. +.++++++|
T Consensus 1 ~~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 368999996 2469999999999999999999999999999999999999999999999999976554 345778999
Q ss_pred EcCCCCCCc-hhHHHHHhcCCCCC-----CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 465 VSQEPVLFT-GSIKDNIAYGKDDA-----TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 465 v~Q~~~l~~-~ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
|+|++.++. .|++||+.++.... +.++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998764 59999999764211 111111 1233455555 6666667778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchHH
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAYS 616 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 616 (1288)
.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998875 46899999999999876 999999999999987765443100
Q ss_pred HHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCCCC
Q 000777 617 QLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGPSQ 696 (1288)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1288)
.....
T Consensus 225 ~~~~~--------------------------------------------------------------------------- 229 (491)
T PRK10982 225 KIIAM--------------------------------------------------------------------------- 229 (491)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 00000
Q ss_pred CCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHH
Q 000777 697 PTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFL 776 (1288)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 776 (1288)
T Consensus 230 -------------------------------------------------------------------------------- 229 (491)
T PRK10982 230 -------------------------------------------------------------------------------- 229 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 777 LSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLI 856 (1288)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 856 (1288)
+ +.. +.
T Consensus 230 ---------------------------~-------~~~-~~--------------------------------------- 235 (491)
T PRK10982 230 ---------------------------M-------VGR-SL--------------------------------------- 235 (491)
T ss_pred ---------------------------H-------hCC-Cc---------------------------------------
Confidence 0 000 00
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHH
Q 000777 857 IAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPM 936 (1288)
Q Consensus 857 ~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~ 936 (1288)
T Consensus 236 -------------------------------------------------------------------------------- 235 (491)
T PRK10982 236 -------------------------------------------------------------------------------- 235 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 937 KTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASI 1016 (1288)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri 1016 (1288)
.+
T Consensus 236 -----------------------------------------------------------------------------~~- 237 (491)
T PRK10982 236 -----------------------------------------------------------------------------TQ- 237 (491)
T ss_pred -----------------------------------------------------------------------------cc-
Confidence 00
Q ss_pred HHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC
Q 000777 1017 FAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD 1096 (1288)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~ 1096 (1288)
..+.. . ... .+..|+++||+++|. ++|+|+||+|++||++||+|+||||||||+++|+|+.+
T Consensus 238 ----~~~~~--~-~~~------~~~~i~~~~l~~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~ 299 (491)
T PRK10982 238 ----RFPDK--E-NKP------GEVILEVRNLTSLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE 299 (491)
T ss_pred ----ccccc--c-CCC------CCcEEEEeCcccccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc
Confidence 00000 0 000 011489999999752 48999999999999999999999999999999999999
Q ss_pred CCCceEEECCeeccCCCHH-HHhcceEEEccCCC---Cch-hhHHHH-----HhcCCC--CCCCHHHHHHHHHHhchhHH
Q 000777 1097 PDAGHITLDGVEIQKLQLK-WLRQQMGLVSQEPV---LFN-DTIRAN-----IAYGKG--GDATEAEIQAASEMANAHKF 1164 (1288)
Q Consensus 1097 p~~G~I~idG~di~~i~~~-~lR~~i~~V~Qd~~---Lf~-gTIreN-----l~~g~~--~~~sd~ei~~al~~a~l~~~ 1164 (1288)
|++|+|.+||.++...+.. .+|+.++|+||++. +|. .|+.+| +.+... ...+..+..+ .+.++
T Consensus 300 p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 374 (491)
T PRK10982 300 KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKS-----DTQWV 374 (491)
T ss_pred CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHH-----HHHHH
Confidence 9999999999999876643 45788999999963 454 567666 332110 0011111111 11223
Q ss_pred HHhhhcccc-ccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCch
Q 000777 1165 ICSLQQGYD-TMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLS 1242 (1288)
Q Consensus 1165 i~~lp~Gld-t~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ 1242 (1288)
+..+ |+. -........||||||||++||||++.+|+||||||||++||+.+...+.+.|+++. +++|+|+|||+++
T Consensus 375 l~~~--~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~ 452 (491)
T PRK10982 375 IDSM--RVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP 452 (491)
T ss_pred HHhc--CccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH
Confidence 3333 221 12345567899999999999999999999999999999999999999999998764 5789999999999
Q ss_pred hhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1243 TIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1243 ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
.+.. |||+++|++|+++..++.+++
T Consensus 453 ~~~~~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 453 ELLGITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred HHHhhCCEEEEEECCEEEEEEccccC
Confidence 9965 999999999999988877544
No 85
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-69 Score=670.22 Aligned_cols=482 Identities=22% Similarity=0.352 Sum_probs=347.1
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ..|+
T Consensus 2 l~i~~ls~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFG---AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeC---CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 78999999996 346999999999999999999999999999999999999999999999872 4699
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCCCC----------------CHH---HHHHH----------HHHcCHHHHHHhCCCCcc
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKDDA----------------TTE---EIRVA----------TELANAAKFIDKLPQGID 513 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~l~~g~~ 513 (1288)
|++|++.++. .|++||+.++.... ... .+.+. .....+.+.++.+ |++
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 9999998775 59999998753100 000 00000 0011234455555 565
Q ss_pred ccc-cCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEE
Q 000777 514 TLV-GEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIA 591 (1288)
Q Consensus 514 t~~-~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~ 591 (1288)
... .....+||||||||++|||||+.+|++|||||||++||+.+.+++.+.|.+ .+.|+|+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 433 345789999999999999999999999999999999999999999999875 37899999999999876 99999
Q ss_pred EEeCCEE-eEecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCc
Q 000777 592 VIHRGKI-VEKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRH 670 (1288)
Q Consensus 592 ~l~~G~i-~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (1288)
+|++|++ ++.|+++++++.....+....+.. +. . . +.
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~------~~-----~--~---~~-------------------------- 261 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERLLADN------AK-----K--K---AQ-------------------------- 261 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHHHHH------HH-----H--H---HH--------------------------
Confidence 9999999 478888877542110000000000 00 0 0 00
Q ss_pred ccccccCCCCCCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000777 671 SISVSFGLPSGQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFF 750 (1288)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1288)
.+.+
T Consensus 262 ------------------------------------~~~~---------------------------------------- 265 (530)
T PRK15064 262 ------------------------------------IAEL---------------------------------------- 265 (530)
T ss_pred ------------------------------------HHHH----------------------------------------
Confidence 0000
Q ss_pred CCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhH
Q 000777 751 KPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADA 830 (1288)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~ 830 (1288)
+. ...+. . ...
T Consensus 266 ----------------------------------------------~~-~~~~~--------~--~~~------------ 276 (530)
T PRK15064 266 ----------------------------------------------QS-FVSRF--------S--ANA------------ 276 (530)
T ss_pred ----------------------------------------------HH-HHHHh--------h--ccc------------
Confidence 00 00000 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000777 831 ASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVG 910 (1288)
Q Consensus 831 ~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~ 910 (1288)
..
T Consensus 277 -------------------------------------------------------------~~----------------- 278 (530)
T PRK15064 277 -------------------------------------------------------------SK----------------- 278 (530)
T ss_pred -------------------------------------------------------------hh-----------------
Confidence 00
Q ss_pred hHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHH
Q 000777 911 SIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLT 990 (1288)
Q Consensus 911 g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~ 990 (1288)
.....
T Consensus 279 ------------------------~~~~~--------------------------------------------------- 283 (530)
T PRK15064 279 ------------------------AKQAT--------------------------------------------------- 283 (530)
T ss_pred ------------------------hHHHH---------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccCCCCCCCCC--CccccCCCccEEEEEEEEECCCCCCcccccceeE
Q 000777 991 MTAIGISQSSSFSSDSNKAKSAAASIFAI--IDRESKIDPSDES--GTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNL 1066 (1288)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~ri~~~--~~~~~~~~~~~~~--~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl 1066 (1288)
....++.+. ...++........ .......+..|+++||+++|++ .++|+|+||
T Consensus 284 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~ 340 (530)
T PRK15064 284 --------------------SRAKQIDKIKLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNL 340 (530)
T ss_pred --------------------HHHHHHhhccccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEE
Confidence 000000000 0000000000000 0000001235999999999963 369999999
Q ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCC--Cc-hhhHHHHHhcCC
Q 000777 1067 KIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPV--LF-NDTIRANIAYGK 1143 (1288)
Q Consensus 1067 ~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~--Lf-~gTIreNl~~g~ 1143 (1288)
+|++||++||+||||||||||+++|+|+++|++|+|.++|. ++++|+||++. ++ ..|+++|+.+..
T Consensus 341 ~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i~~~~q~~~~~~~~~~t~~~~~~~~~ 409 (530)
T PRK15064 341 LLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-----------ANIGYYAQDHAYDFENDLTLFDWMSQWR 409 (530)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eEEEEEcccccccCCCCCcHHHHHHHhc
Confidence 99999999999999999999999999999999999999972 57999999974 44 369999996431
Q ss_pred CCCCCHHHHHHHHHHhchh-HHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHH
Q 000777 1144 GGDATEAEIQAASEMANAH-KFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQ 1222 (1288)
Q Consensus 1144 ~~~~sd~ei~~al~~a~l~-~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~ 1222 (1288)
.....++++.++++..++. +. .......||||||||++||||++++|+||||||||++||+.+...+.
T Consensus 410 ~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~ 478 (530)
T PRK15064 410 QEGDDEQAVRGTLGRLLFSQDD-----------IKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLN 478 (530)
T ss_pred cCCccHHHHHHHHHHcCCChhH-----------hcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHH
Confidence 1123455677777777663 22 23445689999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEE-EecChhhhhcC
Q 000777 1223 DALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIV-EKGKHENLINI 1270 (1288)
Q Consensus 1223 ~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv-e~Gt~~eLl~~ 1270 (1288)
+.|++. +.|+|+|||+++.+.. ||+|++|++|+++ ..|+++++++.
T Consensus 479 ~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 479 MALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 999986 5699999999999876 9999999999998 78999998864
No 86
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.6e-70 Score=670.34 Aligned_cols=453 Identities=21% Similarity=0.293 Sum_probs=346.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 4 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 4 LQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred EEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 899999999963 45999999999999999999999999999999999999999999999998887666666777899
Q ss_pred EEcCCCCC--C-------chhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 464 LVSQEPVL--F-------TGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 464 ~v~Q~~~l--~-------~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
|++|++.+ + ..|+++|+.++. ...+++.++ ++.+ |++........+||||||||++||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------l~~~--~l~~~~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCEQL---------AQQF--GITALLDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch--hHHHHHHHH---------HHHc--CCHhhhhCCcccCCHHHHHHHHHH
Confidence 99998753 2 458999886531 112223333 3333 444445666789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|+++..|+++++....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~- 226 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA- 226 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch-
Confidence 999999999999999999999999999999998754 6799999999999876 9999999999999988877664320
Q ss_pred chHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCC
Q 000777 613 GAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPA 692 (1288)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1288)
....+.. . . . . . . .
T Consensus 227 -~~~~~~~---------~--------~-------~------~---------------------------------~-~-~ 240 (490)
T PRK10938 227 -LVAQLAH---------S--------E-------Q------L---------------------------------E-G-V 240 (490)
T ss_pred -hhhhhhh---------h--------h-------c------c---------------------------------C-c-c
Confidence 0000000 0 0 0 0 0 0 0
Q ss_pred CCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHH
Q 000777 693 GPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGA 772 (1288)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 772 (1288)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 773 GSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAA 852 (1288)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~ 852 (1288)
+.++.
T Consensus 241 ----------------------------------------~~~~~----------------------------------- 245 (490)
T PRK10938 241 ----------------------------------------QLPEP----------------------------------- 245 (490)
T ss_pred ----------------------------------------ccCcc-----------------------------------
Confidence 00000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHH
Q 000777 853 AGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKC 932 (1288)
Q Consensus 853 ~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~ 932 (1288)
T Consensus 246 -------------------------------------------------------------------------------- 245 (490)
T PRK10938 246 -------------------------------------------------------------------------------- 245 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 933 EAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSA 1012 (1288)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1288)
T Consensus 246 -------------------------------------------------------------------------------- 245 (490)
T PRK10938 246 -------------------------------------------------------------------------------- 245 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 000777 1013 AASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQ 1092 (1288)
Q Consensus 1013 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~ 1092 (1288)
. ++....... ....-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+
T Consensus 246 --------~-~~~~~~~~~------~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~ 307 (490)
T PRK10938 246 --------D-EPSARHALP------ANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLIT 307 (490)
T ss_pred --------c-ccccccccC------CCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHc
Confidence 0 000000000 00124999999999963 35999999999999999999999999999999999
Q ss_pred ccCCC-CCceEEECCeeccC-CCHHHHhcceEEEccCCCCch---hhHHHHHhcCCC------CCCC---HHHHHHHHHH
Q 000777 1093 RFYDP-DAGHITLDGVEIQK-LQLKWLRQQMGLVSQEPVLFN---DTIRANIAYGKG------GDAT---EAEIQAASEM 1158 (1288)
Q Consensus 1093 rl~~p-~~G~I~idG~di~~-i~~~~lR~~i~~V~Qd~~Lf~---gTIreNl~~g~~------~~~s---d~ei~~al~~ 1158 (1288)
|+.+| ++|+|.++|.++.. .+...+|++|+|++|++.++. .|+++++.++.. .... ++++.++++.
T Consensus 308 G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 387 (490)
T PRK10938 308 GDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDI 387 (490)
T ss_pred CCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHH
Confidence 98876 69999999987632 233457889999999986542 467777653210 0111 2345555555
Q ss_pred hchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC-C-ceEEE
Q 000777 1159 ANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK-N-RTTVV 1236 (1288)
Q Consensus 1159 a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~-~TvI~ 1236 (1288)
.++.+. ........||||||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ + .|+|+
T Consensus 388 ~~l~~~----------~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tvii 457 (490)
T PRK10938 388 LGIDKR----------TADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLF 457 (490)
T ss_pred cCCchh----------hccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 554320 23344568999999999999999999999999999999999999999999998753 3 46999
Q ss_pred EecCchhhhh--cCEEEEEeCCEEEEec
Q 000777 1237 VAHRLSTIKN--ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1237 IaHrl~ti~~--~DrI~vl~~G~Ive~G 1262 (1288)
|||+++.+.. ||++++|++|+|++.-
T Consensus 458 vsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 458 VSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred EecchhhhhhhhheeEEEecCCceEEee
Confidence 9999999964 7999999999998754
No 87
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.9e-68 Score=594.65 Aligned_cols=530 Identities=22% Similarity=0.298 Sum_probs=456.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 66 IGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKT 145 (1288)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 145 (1288)
+++.+..+.....|+++-.+.|......+ ...+....++.+++.++..++-+++.....+++.++-.++...+|..
T Consensus 30 lfS~~INiL~L~~~lyMLQVyDRVL~S~s----~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a 105 (580)
T COG4618 30 LFSAVINLLALTGPLYMLQVYDRVLPSRS----VPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAA 105 (580)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhccCCC----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34444555566777888888888765432 23344444455666777888999999999999999999999999999
Q ss_pred HHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000777 146 ILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGE-KVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSGGVM 224 (1288)
Q Consensus 146 ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~~~~ 224 (1288)
.++.+..-- ..|+=..-+ +|.++++.+++. .+..++...|+.+. ++++|.++++++++.++...+++.+.++.
T Consensus 106 ~~~~~l~~~----~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P~y-l~v~fl~Hp~lG~~a~~ga~iLv~la~ln 179 (580)
T COG4618 106 SFSAPLLRR----GSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMPLY-LAVIFLFHPWLGLIALAGAIILVVLALLN 179 (580)
T ss_pred HHhhHHhhc----CCCccccch-hhHHHHHHHHcCCCcchhcCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987776432 344333333 699999999975 55566666676655 56677888888988888888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 225 AIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYAL 304 (1288)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (1288)
-+..++-.++..+...+++....-+..+.++|++.|+.....++|.+.+..+.....+..-..+.+..+.-.+-.+....
T Consensus 180 ~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~ 259 (580)
T COG4618 180 ERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSA 259 (580)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777888888889999999999999999999999999999999998888888777777777777776776777778
Q ss_pred HHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCcccE
Q 000777 305 SVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIRGDI 384 (1288)
Q Consensus 305 ~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i 384 (1288)
++..|++++++|++|+|.+++.-..+.....|+......+..+..++.+.+|+.+.+...|+..+ ..+.+..+|.+
T Consensus 260 iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L 335 (580)
T COG4618 260 VLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGAL 335 (580)
T ss_pred HHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCcee
Confidence 88899999999999999998877667777789999999999999999999999999988776332 24556667899
Q ss_pred EEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEE
Q 000777 385 ELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGL 464 (1288)
Q Consensus 385 ~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 464 (1288)
.++++++.=|+ .++++|+|+||++++||.+|||||||||||||.++|.|.++|++|.|++||-|+++++.+.+-++|||
T Consensus 336 ~Ve~l~~~PPg-~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGY 414 (580)
T COG4618 336 SVERLTAAPPG-QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGY 414 (580)
T ss_pred eEeeeeecCCC-CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCc
Confidence 99999997654 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000777 465 VSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRIL 544 (1288)
Q Consensus 465 v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~il 544 (1288)
.||+..||.|||+|||+=..++.+.+.+.+|++.++.||.|.++|+||||.+|+.|..|||||||||+||||||.||.++
T Consensus 415 LPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 415 LPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred CcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEE
Confidence 99999999999999999777788899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 545 LLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 545 llDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+||||-|+||.+.|..+.++|...+ +++|+|+||||++.+..+|+|++|++|++...|+.+|.+++
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999998876 47899999999999999999999999999999999998865
No 88
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.9e-68 Score=710.22 Aligned_cols=214 Identities=21% Similarity=0.382 Sum_probs=182.9
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC---CCCceEEECCeeccCCCHHHH
Q 000777 1042 EIELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD---PDAGHITLDGVEIQKLQLKWL 1117 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~l 1117 (1288)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|+|+.+ |++|+|++||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3579999999999999999999999999999999999997 78899999999985 257
Q ss_pred hcceEEEccCCC-CchhhHHHHHhcCC----CCCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1118 RQQMGLVSQEPV-LFNDTIRANIAYGK----GGDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1118 R~~i~~V~Qd~~-Lf~gTIreNl~~g~----~~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
|++++||+|++. ++..|+||||.++. +...+++ .+.++++..++.+ -.|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHh
Confidence 899999999875 55789999998641 1123333 3556666666543 368999998889999999
Q ss_pred HHHHHHHHHcCCCC-EEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhh--hhcCEEEEEeCC-EEEEecC
Q 000777 1189 QRVAIARAIVKDPK-ILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTI--KNADMIAVVKNG-VIVEKGK 1263 (1288)
Q Consensus 1189 QrlaiARALlr~p~-ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti--~~~DrI~vl~~G-~Ive~Gt 1263 (1288)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++.. +++|||+++|+++.. ..+|+|++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 999999999999999999999999874 679999999999974 569999999997 9999999
Q ss_pred hhh
Q 000777 1264 HEN 1266 (1288)
Q Consensus 1264 ~~e 1266 (1288)
+.+
T Consensus 988 ~~~ 990 (1394)
T TIGR00956 988 LGE 990 (1394)
T ss_pred ccc
Confidence 744
No 89
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=6.4e-66 Score=640.09 Aligned_cols=526 Identities=19% Similarity=0.199 Sum_probs=401.6
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 714 NKPEIPVILAGTIAAMANGVILPI-YGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKL 792 (1288)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 792 (1288)
.+++++.++.+++.+++..++... .+++...+++.... .... ...++++.++..++.++..++..+++.++
T Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (547)
T PRK10522 8 WRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT------SLLV--LPEFLGLLLLLMAVTLGSQLALTTLGHHF 79 (547)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------cchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555444433 23444445543211 0001 11122223333456778888999999999
Q ss_pred HHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 000777 793 IQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVM 872 (1288)
Q Consensus 793 ~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~ 872 (1288)
..++|.++|++++++|++||++ +++|++++|+++|++.+...+. .++.++..++.++++++++++++|.++++++++
T Consensus 80 ~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 80 VYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999994 8899999999999999998765 477888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchH---HHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000777 873 LPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAE---EKVMQLYKKKCEAPMKTGIRQGMVSGGG 949 (1288)
Q Consensus 873 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1288)
+|+.+++.++..+..++..++.++...+..+.+.|.++|+++++ ++.+ +.+.++|.+..++..+...+........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSA 235 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 99888887777777777777778888899999999999999995 4443 4567788887777766655544443332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000777 950 FGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRESKIDPS 1029 (1288)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 1029 (1288)
......+......+.++++..+ +..+.+....+..+......|+..+......+..+..+.+|+.++.+.+++.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 236 VNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 2222222222222233333222 1123333333333334456789999999999999999999999987543321111
Q ss_pred CCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeec
Q 000777 1030 DESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEI 1109 (1288)
Q Consensus 1030 ~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di 1109 (1288)
. . . +.+..+.|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+
T Consensus 313 ~-~-~-~~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~ 387 (547)
T PRK10522 313 R-P-Q-AFPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPV 387 (547)
T ss_pred c-c-c-ccCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEC
Confidence 1 1 1 1111357999999999974 34699999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1110 QKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1110 ~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
++++.+++|++++||||||.+|++|+++| + .+.++++++++++.+++.+++.. |+|. .+|.+|||||||
T Consensus 388 ~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~--~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~q 456 (547)
T PRK10522 388 TAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G--KPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKK 456 (547)
T ss_pred CCCCHHHHhhheEEEecChhHHHHhhccc---c--CchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHH
Confidence 99999999999999999999999999999 3 25788899999988888776642 4442 248899999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhhcCEEEEEeCCEEEEe-cChhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKNADMIAVVKNGVIVEK-GKHEN 1266 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~-Gt~~e 1266 (1288)
||+||||++++|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|. |++.+
T Consensus 457 Rl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~~ 536 (547)
T PRK10522 457 RLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERD 536 (547)
T ss_pred HHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCchh
Confidence 9999999999999999999999999999999999997654 47999999999999999999999999999988 66665
Q ss_pred hhcC
Q 000777 1267 LINI 1270 (1288)
Q Consensus 1267 Ll~~ 1270 (1288)
-..+
T Consensus 537 ~~~~ 540 (547)
T PRK10522 537 AASR 540 (547)
T ss_pred hhhh
Confidence 5543
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.9e-67 Score=652.78 Aligned_cols=484 Identities=24% Similarity=0.325 Sum_probs=340.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999952 35699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCCC----------------CH----------HHHHHHHH-------HcCHHHHHHhC
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDDA----------------TT----------EEIRVATE-------LANAAKFIDKL 508 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~~----------------~~----------~~~~~~~~-------~~~~~~~i~~l 508 (1288)
|||+|+|.+++ .|++||+.++.... .. .++.+... ...+.+.++.+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 99999999886 49999998753110 00 00111111 11223344444
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-c
Q 000777 509 PQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-A 587 (1288)
Q Consensus 509 ~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 587 (1288)
|++ .......+|||||||||+|||||+.+|++|||||||++||+.+..++.+.|+++. +|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 453 2466778999999999999999999999999999999999999999999998873 599999999999976 9
Q ss_pred CEEEEEeCCEEe-EecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCC
Q 000777 588 DMIAVIHRGKIV-EKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGN 666 (1288)
Q Consensus 588 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1288)
|+|++|++|+++ ..|+++++.+........... ..+. . .
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~------~~~~--------------~-~------------------- 267 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQKAKRLAQEEK------QEAA--------------R-Q------------------- 267 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHHHHHHHHHHH------HHHH--------------H-H-------------------
Confidence 999999999986 778777664420000000000 0000 0 0
Q ss_pred CCCcccccccCCCCCCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 667 SSRHSISVSFGLPSGQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVI 746 (1288)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1288)
......
T Consensus 268 --------------------------------------~~~~~~------------------------------------ 273 (556)
T PRK11819 268 --------------------------------------KALKRE------------------------------------ 273 (556)
T ss_pred --------------------------------------HHHHHH------------------------------------
Confidence 000000
Q ss_pred HHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHH
Q 000777 747 ETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARL 826 (1288)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~ 826 (1288)
. .|.+. .+.+
T Consensus 274 ------------------------------------------------------~--------~~~~~--~~~~------ 283 (556)
T PRK11819 274 ------------------------------------------------------L--------EWVRQ--SPKA------ 283 (556)
T ss_pred ------------------------------------------------------H--------HHHHH--hhhh------
Confidence 0 00000 0000
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 827 SADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVAN 906 (1288)
Q Consensus 827 ~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1288)
+. .
T Consensus 284 ----------------------------------------------------------~~----~--------------- 286 (556)
T PRK11819 284 ----------------------------------------------------------RQ----A--------------- 286 (556)
T ss_pred ----------------------------------------------------------hH----H---------------
Confidence 00 0
Q ss_pred HHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Q 000777 907 DAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVF 986 (1288)
Q Consensus 907 e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~ 986 (1288)
+..
T Consensus 287 ------------------------------~~~----------------------------------------------- 289 (556)
T PRK11819 287 ------------------------------KSK----------------------------------------------- 289 (556)
T ss_pred ------------------------------HHH-----------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCccccccee
Q 000777 987 FSLTMTAIGISQSSSFSSDSNKAKSAAASIFAII-DRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLN 1065 (1288)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~-~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vs 1065 (1288)
......++..+.. ...++......+ ......+.-|+++||+++|++ .++|+|+|
T Consensus 290 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~---~~~l~~is 344 (556)
T PRK11819 290 ---------------------ARLARYEELLSEEYQKRNETNEIFIP-PGPRLGDKVIEAENLSKSFGD---RLLIDDLS 344 (556)
T ss_pred ---------------------HHHHHHHHhhcccccccCCCceeecC-CCCCCCCeEEEEEeEEEEECC---eeeeccee
Confidence 0000000000000 000000000000 000011235999999999963 36999999
Q ss_pred EEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCC-CCch-hhHHHHHhcCC
Q 000777 1066 LKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEP-VLFN-DTIRANIAYGK 1143 (1288)
Q Consensus 1066 l~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~-~Lf~-gTIreNl~~g~ 1143 (1288)
|+|++||++||+|+||||||||+++|+|+++|++|+|.+++ ++ +|+|+||++ .++. .|++||+.++.
T Consensus 345 l~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~ 413 (556)
T PRK11819 345 FSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGL 413 (556)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhc
Confidence 99999999999999999999999999999999999999964 21 599999997 5554 59999998642
Q ss_pred CC---CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHH
Q 000777 1144 GG---DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERV 1220 (1288)
Q Consensus 1144 ~~---~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~ 1220 (1288)
.. ...+++.+++++..++.+ .........||||||||++||||++.+|++|||||||++||+.+...
T Consensus 414 ~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~ 483 (556)
T PRK11819 414 DIIKVGNREIPSRAYVGRFNFKG----------GDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRA 483 (556)
T ss_pred ccccccccHHHHHHHHHhCCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHH
Confidence 10 112333444555444421 11234456899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeC-CEEEE-ecChhhhhcC
Q 000777 1221 VQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKN-GVIVE-KGKHENLINI 1270 (1288)
Q Consensus 1221 I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-G~Ive-~Gt~~eLl~~ 1270 (1288)
+.+.|++. + .|+|+|||+++.+.. ||+|++|++ |++.+ .|+++++++.
T Consensus 484 l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 484 LEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 99999986 3 599999999999876 999999986 88874 7888888765
No 91
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.2e-67 Score=649.17 Aligned_cols=484 Identities=25% Similarity=0.354 Sum_probs=339.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
-++++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 34699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC-----------------CCH---------HHHHHHHHHcC-------HHHHHHhC
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD-----------------ATT---------EEIRVATELAN-------AAKFIDKL 508 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~-----------------~~~---------~~~~~~~~~~~-------~~~~i~~l 508 (1288)
+||+|+|+++. .|++||+.++... ... .++.++.+.++ +.+.++.+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 99999999885 5999999875311 000 11222222222 22334444
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-c
Q 000777 509 PQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-A 587 (1288)
Q Consensus 509 ~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 587 (1288)
|++. ......+||||||||++|||||+.+|++|||||||++||+.+..++.+.|+++ ++|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4432 45677899999999999999999999999999999999999999999999886 3699999999999976 9
Q ss_pred CEEEEEeCCEEe-EecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCC
Q 000777 588 DMIAVIHRGKIV-EKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGN 666 (1288)
Q Consensus 588 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1288)
|+|++|++|+++ ..|+++++.+.... . ...+.. +.++ . .
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~~~---~-~~~~~~--~~~~--------------~-~------------------- 265 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQKEK---R-LEQEEK--EESA--------------R-Q------------------- 265 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHHHH---H-HHHHHH--HHHH--------------H-H-------------------
Confidence 999999999976 67887776542000 0 000000 0000 0 0
Q ss_pred CCCcccccccCCCCCCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 667 SSRHSISVSFGLPSGQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVI 746 (1288)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1288)
T Consensus 266 -------------------------------------------------------------------------------- 265 (552)
T TIGR03719 266 -------------------------------------------------------------------------------- 265 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHH
Q 000777 747 ETFFKPPHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARL 826 (1288)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~ 826 (1288)
..+. +... |.. +.+.
T Consensus 266 -----------------------------------------------~~~~-~~~~--------~~~--~~~~------- 280 (552)
T TIGR03719 266 -----------------------------------------------KALK-RELE--------WVR--SSPK------- 280 (552)
T ss_pred -----------------------------------------------HHHH-HHHH--------HHH--hhhh-------
Confidence 0000 0000 000 0000
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 827 SADAASVRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVAN 906 (1288)
Q Consensus 827 ~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1288)
.... ..
T Consensus 281 ----------------------------------------------------------------~~~~-----~~----- 286 (552)
T TIGR03719 281 ----------------------------------------------------------------ARQA-----KS----- 286 (552)
T ss_pred ----------------------------------------------------------------hHHH-----HH-----
Confidence 0000 00
Q ss_pred HHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Q 000777 907 DAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVF 986 (1288)
Q Consensus 907 e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~ 986 (1288)
.....++
T Consensus 287 ---------------~~~~~~~---------------------------------------------------------- 293 (552)
T TIGR03719 287 ---------------KARLARY---------------------------------------------------------- 293 (552)
T ss_pred ---------------HHHHHHH----------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCccccccee
Q 000777 987 FSLTMTAIGISQSSSFSSDSNKAKSAAASIFA-IIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLN 1065 (1288)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~-~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vs 1065 (1288)
++..+ ....+++......+. .....+.-|+++||+++|++ .++|+|+|
T Consensus 294 ---------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~---~~~l~~is 342 (552)
T TIGR03719 294 ---------------------------EELLSQEFQKRNETAEIYIPP-GPRLGDKVIEAENLSKGFGD---KLLIDDLS 342 (552)
T ss_pred ---------------------------HhhhhhcccccCCCceeecCC-CCCCCCeEEEEeeEEEEECC---eeeeccce
Confidence 00000 000000000000000 00011235999999999963 36999999
Q ss_pred EEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCC-Cc-hhhHHHHHhcCC
Q 000777 1066 LKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPV-LF-NDTIRANIAYGK 1143 (1288)
Q Consensus 1066 l~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~-Lf-~gTIreNl~~g~ 1143 (1288)
|+|++||++||+||||||||||+++|.|+.+|++|+|.+++ ++ +|+|+||++. ++ +.|++||+.++.
T Consensus 343 l~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~ 411 (552)
T TIGR03719 343 FKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGL 411 (552)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhc
Confidence 99999999999999999999999999999999999999964 21 6999999973 55 469999998752
Q ss_pred CC-CC--CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHH
Q 000777 1144 GG-DA--TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERV 1220 (1288)
Q Consensus 1144 ~~-~~--sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~ 1220 (1288)
.. .. .+.+..++++..++.+. ........||||||||++|||||+.+|++|||||||++||+.+...
T Consensus 412 ~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~ 481 (552)
T TIGR03719 412 DIIQLGKREVPSRAYVGRFNFKGS----------DQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRA 481 (552)
T ss_pred cccccCcchHHHHHHHHhCCCChh----------HhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Confidence 10 11 12233444444444211 1234456899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeC-CEEEE-ecChhhhhcC
Q 000777 1221 VQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKN-GVIVE-KGKHENLINI 1270 (1288)
Q Consensus 1221 I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-G~Ive-~Gt~~eLl~~ 1270 (1288)
+.+.|++. +.|+|+|||+++.+.. ||+|++|++ |++++ .|+++++.+.
T Consensus 482 l~~~l~~~--~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 482 LEEALLEF--AGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred HHHHHHHC--CCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHH
Confidence 99999987 3599999999999876 999999997 68774 5788777643
No 92
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.5e-64 Score=625.80 Aligned_cols=509 Identities=19% Similarity=0.181 Sum_probs=386.8
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 62 IIGSIGAIGNGLCLPL-MTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRG 140 (1288)
Q Consensus 62 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~ 140 (1288)
++++++.++..++... .|++.+.++|.... . ...+.. ++++.++..++.+++.++..+.+.++..++|.
T Consensus 16 ~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 85 (547)
T PRK10522 16 ISVMALSLASAALGIGLIAFINQRLIETADT--S----LLVLPE----FLGLLLLLMAVTLGSQLALTTLGHHFVYRLRS 85 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccc--c----chHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555444 35666777775321 1 011111 12222333456678888888899999999999
Q ss_pred HHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000777 141 LYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFIKGWLLTLVMLSSIPLLAMS 220 (1288)
Q Consensus 141 ~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~ 220 (1288)
+++++++++|+++|+++ ++|++++|+++|++.+...+. .+..++..++.+++.++++++++|.+++++++.+|+.+++
T Consensus 86 ~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~~~~~i 163 (547)
T PRK10522 86 EFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAIWMAVTIWG 163 (547)
T ss_pred HHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999975 999999999999999998765 4677788888888889999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 221 GGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGE---KQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLI 297 (1288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1288)
..++.++.++..++.++..++..+.+.|.++|+++++ ++.+ +.+.+++.+..++..+...+..........+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (547)
T PRK10522 164 GFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAVNWSNIM 242 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 8888888888888888899999999999999999996 4433 35567777776666655555444333332222222
Q ss_pred HHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCccc
Q 000777 298 VFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKPEIDAYDTKGKIL 377 (1288)
Q Consensus 298 ~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~ 377 (1288)
..+..++++++++... ..+.+.+..+..+.+....|+..+...+..++.+..+.+|+.++++.+++.+... ....
T Consensus 243 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~~--~~~~ 317 (547)
T PRK10522 243 MLGAIGLVFYMANSLG---WADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFPR--PQAF 317 (547)
T ss_pred HHHHHHHHHHHHHHhh---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc--cccc
Confidence 2222233333443221 1223333333333344557888899999999999999999999875433211111 1111
Q ss_pred CCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH
Q 000777 378 DDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW 457 (1288)
Q Consensus 378 ~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~ 457 (1288)
+ ..+.|+++||+|+|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+|+|++|+|.+||+|+++++.++
T Consensus 318 ~-~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~ 394 (547)
T PRK10522 318 P-DWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPED 394 (547)
T ss_pred C-cCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHH
Confidence 1 1357999999999973 346999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 458 IRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 458 ~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
+|++|+||+|+|++|++|+++| + ++.++++++++++..++.+++. .|+|. .+|.+||||||||++||||+
T Consensus 395 ~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~LSgGq~qRl~lARal 464 (547)
T PRK10522 395 YRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKLSKGQKKRLALLLAL 464 (547)
T ss_pred HhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999 2 3455666666666555544432 22221 13789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCEEeEe
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRNADMIAVIHRGKIVEK 601 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 601 (1288)
+++|++||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||+|++|++|++++.
T Consensus 465 ~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 465 AEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred hcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999987654 47899999999999999999999999999876
No 93
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-66 Score=644.35 Aligned_cols=200 Identities=26% Similarity=0.382 Sum_probs=167.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999963 36999999999999999999999999999999999999999999999741 269
Q ss_pred EEEccCC--CCc-hhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1122 GLVSQEP--VLF-NDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1122 ~~V~Qd~--~Lf-~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
+|++|++ .+. ..|+.+++... .+...++++.+.++..++.+. .+......||||||||++||||++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~l~~~----------~~~~~~~~LSgGekqRl~La~~l~ 446 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARL-APQELEQKLRDYLGGFGFQGD----------KVTEETRRFSGGEKARLVLALIVW 446 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHh-CchhhHHHHHHHHHHcCCChh----------HhcCchhhCCHHHHHHHHHHHHHh
Confidence 9999985 343 34888887421 112345566666666665321 122344579999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEE-EecChhhhh
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIV-EKGKHENLI 1268 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv-e~Gt~~eLl 1268 (1288)
.+|+||||||||++||+.+...+.+.|++. +.|||+|||++..+.. ||+|++|++|+++ ..|++++..
T Consensus 447 ~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 447 QRPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 999999999999999999999999999986 4599999999999976 9999999999998 679998874
No 94
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.5e-63 Score=659.85 Aligned_cols=214 Identities=25% Similarity=0.410 Sum_probs=179.0
Q ss_pred cEEEEEEEEECCCC----------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC--CCceEEECCeec
Q 000777 1042 EIELHHVSFKYPSR----------PDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP--DAGHITLDGVEI 1109 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~----------~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p--~~G~I~idG~di 1109 (1288)
.++|+||++.++.. ...++|+|||++|+|||.+||+||||||||||+++|+|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999998532 123699999999999999999999999999999999999763 689999999886
Q ss_pred cCCCHHHHhcceEEEccCCCCch-hhHHHHHhcCC----CCCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCC
Q 000777 1110 QKLQLKWLRQQMGLVSQEPVLFN-DTIRANIAYGK----GGDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERG 1180 (1288)
Q Consensus 1110 ~~i~~~~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~----~~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G 1180 (1288)
.+ ..+|+.++||+|++.++. .|++|||.+.. +...+.+ .+.++++..++.+. .|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 42 457788999999987765 69999998641 1123333 35667777776543 367777554
Q ss_pred -CCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchh-h-hhcCEEEEEeC-
Q 000777 1181 -LQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLST-I-KNADMIAVVKN- 1255 (1288)
Q Consensus 1181 -~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~t-i-~~~DrI~vl~~- 1255 (1288)
..||||||||++|||+|+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6899999999999999999999999999999999999999999999875 47899999999984 4 56999999996
Q ss_pred CEEEEecChh
Q 000777 1256 GVIVEKGKHE 1265 (1288)
Q Consensus 1256 G~Ive~Gt~~ 1265 (1288)
|+++.+|+..
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 95
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=6.9e-64 Score=629.03 Aligned_cols=202 Identities=25% Similarity=0.398 Sum_probs=165.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4899999999963 36999999999999999999999999999999999999999999999 4332 59
Q ss_pred EEEccCC-CCch-hhHHHHHhcCCCC-CCC--HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1122 GLVSQEP-VLFN-DTIRANIAYGKGG-DAT--EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1122 ~~V~Qd~-~Lf~-gTIreNl~~g~~~-~~s--d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
+|++|++ .++. .|+.||+.++... ... +.++.+.++..++.+ + ........||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~----~~~~~~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------K----RAMTPVKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------H----HHhChhhhCCHHHHHHHHHHHH
Confidence 9999986 3554 5999999864211 111 334444554444321 1 1223345799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEe-CCEEEEe-cChhhhhc
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVK-NGVIVEK-GKHENLIN 1269 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~-~G~Ive~-Gt~~eLl~ 1269 (1288)
|+.+|++|||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. ||+|++|+ +|+|.++ |++++-+.
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999886 5699999999999965 99999998 8999875 78877643
No 96
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.2e-64 Score=629.37 Aligned_cols=201 Identities=28% Similarity=0.381 Sum_probs=166.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|++ .+++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~--~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPG--GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCC--CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 5999999999963 23699999999999999999999999999999999999999999999975 3479
Q ss_pred EEEccCCCCchhhHHHHHh--cC-CCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1122 GLVSQEPVLFNDTIRANIA--YG-KGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~gTIreNl~--~g-~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
+|+||++. ...++.+|.. +. ..+..+++++.++++..++.+.. .......||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 2234555532 10 01234577888888888775321 12345689999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEE-EecChhhhh
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIV-EKGKHENLI 1268 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv-e~Gt~~eLl 1268 (1288)
.+|++|||||||++||+.+...+.+.|++. +.|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999875 3599999999999976 9999999999998 568877653
No 97
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=5.1e-62 Score=612.11 Aligned_cols=530 Identities=14% Similarity=0.119 Sum_probs=434.6
Q ss_pred HHHHHHhhchhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHHHHHHH
Q 000777 46 FYKLFTFADSADT----ALMIIGSIGAIGNGLCLPLMTLLFGDLINTFGDNQNNSETVDKVSKVAVKFVYLGIGSGIASF 121 (1288)
Q Consensus 46 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 121 (1288)
++++++|+.|++. ..+++.+++.++..++....|++.+.++|..... +.......+..++++++++.++..+..|
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~-~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRR-SPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788876654 2456667777778888889999999999986532 1111111122334445555666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 122 LQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFLGGFLIAFI 201 (1288)
Q Consensus 122 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 201 (1288)
+..++......++..++|..++++....++.+||+ ++|++.+|+++|++.+.+.+...+..++..++.+++.++.++.
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888999999999999988889999984 6899999999999999999999999999999998888877775
Q ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 000777 202 -KGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSG 280 (1288)
Q Consensus 202 -~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 280 (1288)
++|.+++++++.+|+.+++..++.+.+.+...+.++..++..+.+.|.++|+++||+|+.|+.+.+++.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHh-h----cCcCHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHH
Q 000777 281 VQEGLAAGIGLGMVMLIVFC--SYALSVWYGGKLIL-E----EGYNGGQVVN-VMVA---VLTGSMSLGEASPCLSAFGA 349 (1288)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~v~-~----~~~~~g~~~~-~~~~---~~~~~~~l~~~~~~~~~~~~ 349 (1288)
.+...+.+....+..++... ..++.++.|...+. . |.+|.|.+++ ++.+ +.....|+..+...+..+++
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877777766655432 22223333443332 2 6788887766 3332 44557789999999999999
Q ss_pred HHHHHHHHHHHhccCCCCccC-------CC--CC-------------cccCCCcccEEEEeEEEECCCCCCCcccccceE
Q 000777 350 GQAAAFKMFETINRKPEIDAY-------DT--KG-------------KILDDIRGDIELRDVYFSYPARPNEQIFSGFSI 407 (1288)
Q Consensus 350 ~~~a~~ri~~~l~~~~~~~~~-------~~--~~-------------~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l 407 (1288)
+.++++|++++++.+++.+.. .. .. .......+.|+++||+|+|++ ++++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceE
Confidence 999999999999754432100 00 00 001112356999999999963 3469999999
Q ss_pred EEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCC---
Q 000777 408 SISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGK--- 484 (1288)
Q Consensus 408 ~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~--- 484 (1288)
+|++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||||+|++|++|++|||.++.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999875 56899999999999999999999874
Q ss_pred ----CCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHH
Q 000777 485 ----DDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKV 560 (1288)
Q Consensus 485 ----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~ 560 (1288)
+..++++++++++.+++++++++ |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 33567788999999999998887 899999876 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeC
Q 000777 561 VQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHR 595 (1288)
Q Consensus 561 i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 595 (1288)
+.+.+++. ++|+|+||||++.++.||+|++|++
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 7899999999999988999999974
No 98
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-63 Score=578.32 Aligned_cols=461 Identities=27% Similarity=0.422 Sum_probs=357.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH-HHhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ-WIRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~-~~r~~ 461 (1288)
-++++|++++|+ +.++|+|+||++.+||++||+|+||||||||+|+|+|.|+|++|+|.+||+++...++. .....
T Consensus 8 ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 488999999996 46799999999999999999999999999999999999999999999999999876654 56789
Q ss_pred eEEEcCCCCCC-chhHHHHHhcCCCCCC------HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 462 IGLVSQEPVLF-TGSIKDNIAYGKDDAT------TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 462 i~~v~Q~~~l~-~~ti~~ni~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
|+.|+||..|+ +.||.|||.+|.+... ..++.+.+ .+.++.+ |++........+||+||||.|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A-----~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA-----RELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH-----HHHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 99999999998 5699999999976433 23332222 2344555 332225556678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecCh-hHHhcCC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTH-SKLVEDP 611 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~-~~l~~~~ 611 (1288)
||+..+++|+|||||||+|+....+.+++.+++++ +|.++|+||||++++.. ||||.||+||+.+..++. .++-.+
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~~- 236 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSED- 236 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCHH-
Confidence 99999999999999999999999999999999987 47899999999999976 999999999999865431 111000
Q ss_pred CchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCC
Q 000777 612 EGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEP 691 (1288)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1288)
++++.
T Consensus 237 -----~lv~~---------------------------------------------------------------------- 241 (500)
T COG1129 237 -----ELVRL---------------------------------------------------------------------- 241 (500)
T ss_pred -----HHHHH----------------------------------------------------------------------
Confidence 00000
Q ss_pred CCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHH
Q 000777 692 AGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALG 771 (1288)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 771 (1288)
.
T Consensus 242 ---------------------------------------------------------M---------------------- 242 (500)
T COG1129 242 ---------------------------------------------------------M---------------------- 242 (500)
T ss_pred ---------------------------------------------------------h----------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000777 772 AGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTA 851 (1288)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~ 851 (1288)
.|+
T Consensus 243 -----------------------------------------------vGr------------------------------ 245 (500)
T COG1129 243 -----------------------------------------------VGR------------------------------ 245 (500)
T ss_pred -----------------------------------------------hCc------------------------------
Confidence 000
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHH
Q 000777 852 AAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKK 931 (1288)
Q Consensus 852 ~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~ 931 (1288)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 932 CEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKS 1011 (1288)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1288)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000777 1012 AAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLL 1091 (1288)
Q Consensus 1012 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL 1091 (1288)
++-+..+. .... ......++++|++.. ..++|+||++++||.+||.|-=|||+|-++++|
T Consensus 246 ------~~~~~~~~-~~~~------~~~~~~l~v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~l 305 (500)
T COG1129 246 ------ELEDLFPE-PPEE------GIGEPVLEVRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARAL 305 (500)
T ss_pred ------chhhhccc-cccc------CCCCcEEEEecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHH
Confidence 00000000 0000 001123678887742 158999999999999999999999999999999
Q ss_pred hccCCCCCceEEECCeeccCCC-HHHHhcceEEEccCC----CCchhhHHHHHhcCCCCCCCHH-HHHHHHHHhchhHHH
Q 000777 1092 QRFYDPDAGHITLDGVEIQKLQ-LKWLRQQMGLVSQEP----VLFNDTIRANIAYGKGGDATEA-EIQAASEMANAHKFI 1165 (1288)
Q Consensus 1092 ~rl~~p~~G~I~idG~di~~i~-~~~lR~~i~~V~Qd~----~Lf~gTIreNl~~g~~~~~sd~-ei~~al~~a~l~~~i 1165 (1288)
+|..++.+|+|.+||.++.--+ .+..+..|+|||-|- .+...+|++|+.+......+.. -+....+..-..+++
T Consensus 306 fG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~ 385 (500)
T COG1129 306 FGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYI 385 (500)
T ss_pred hCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHH
Confidence 9999999999999999887665 557899999999986 3557899999976411111111 244445555566777
Q ss_pred HhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhh
Q 000777 1166 CSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTI 1244 (1288)
Q Consensus 1166 ~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti 1244 (1288)
.+|.-.-.. ....-.+||||.+|+++|||+|..+|+||||||||.++|.-+.++|.+.|+++. +|.+||+||-.+..+
T Consensus 386 ~~l~Ik~~s-~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEl 464 (500)
T COG1129 386 RRLRIKTPS-PEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPEL 464 (500)
T ss_pred HhcCcccCC-ccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence 766432211 123345899999999999999999999999999999999999999999999986 679999999999998
Q ss_pred h-hcCEEEEEeCCEEEEecChhh
Q 000777 1245 K-NADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1245 ~-~~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
. .||||+||.+|+|+..=+.++
T Consensus 465 l~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 465 LGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred HhhCCEEEEEECCEEEEEecccc
Confidence 6 599999999999997544433
No 99
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.7e-61 Score=605.51 Aligned_cols=528 Identities=14% Similarity=0.121 Sum_probs=431.5
Q ss_pred hHhhhhhcCChhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-cchhchHHHHHHHHHHHHHHHHHHHH
Q 000777 707 TRRLAYLNKPEIP-----VILAGTIAAMANGVILPIYGLLISSVIETFFKPPH-ELKKDSRFWALIYLALGAGSFLLSPA 780 (1288)
Q Consensus 707 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 780 (1288)
+++++.+.+|+++ .++..+++.++...+....+++...+++....... ........|.++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666664 45566666666677777778888888887653211 01111222334444555566677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 781 QSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIAFT 860 (1288)
Q Consensus 781 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~ 860 (1288)
..++......++..++|++.+++....++.|||. +.|++.+|+++|++.+...+...+..++..++.++++++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888999999999999988999999983 6799999999999999999999999999999999988887776
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 000777 861 -ASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTG 939 (1288)
Q Consensus 861 -~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~ 939 (1288)
.+|.+++++++.+|+..++.++..+...+...+.++..++....+.|.+.|+++|++|+.++.+.+++.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHH-hc----CCcCHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHH
Q 000777 940 IRQGMVSGGGFGASFFLLFA--FYAASFYAGARLV-ED----GKATFSDVFKV-FFS---LTMTAIGISQSSSFSSDSNK 1008 (1288)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv-~~----g~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~ 1008 (1288)
.+...+......+..++... .....++.|...+ .. |.+|+|.+++. ..+ +..+..|+..+.....++++
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888887777777666542 2222333334233 22 78898887663 332 45567889999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCC--------CC-CCC-------------ccccCCCccEEEEEEEEECCCCCCcccccceeE
Q 000777 1009 AKSAAASIFAIIDRESKIDP--------SD-ESG-------------TILEDVKGEIELHHVSFKYPSRPDVQVFRDLNL 1066 (1288)
Q Consensus 1009 ~~~~~~ri~~~~~~~~~~~~--------~~-~~~-------------~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl 1066 (1288)
+..+.+|++++++.+++.+. ++ +.. .......+.|+++||+|+|++ ++++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceE
Confidence 99999999999875432110 00 000 001113356999999999974 2369999999
Q ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCC--
Q 000777 1067 KIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKG-- 1144 (1288)
Q Consensus 1067 ~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-- 1144 (1288)
+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++++||||+|.+|++|++||+.++..
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 678999999999999999999998631
Q ss_pred ----CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHH
Q 000777 1145 ----GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERV 1220 (1288)
Q Consensus 1145 ----~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~ 1220 (1288)
.+.++++++++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 23578899999999999999987 999999876 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEecCchhhhhcCEEEEEe
Q 000777 1221 VQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVK 1254 (1288)
Q Consensus 1221 I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~ 1254 (1288)
+.+.+++. ++|+|+||||+++++.||+|++|+
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~ 652 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMD 652 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEe
Confidence 99999874 899999999999999999999997
No 100
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.1e-62 Score=585.40 Aligned_cols=485 Identities=28% Similarity=0.375 Sum_probs=347.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|+ ++++|+|+||++.+|+++||||+||||||||+++|+|...|++|+|...+. -+|
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 488999999995 467999999999999999999999999999999999999999999998761 269
Q ss_pred EEEcCCCCCCch-hHHHHHhcCCCCCCH--HHHHHHHH-------------------------HcCHHHHHHhCCCCccc
Q 000777 463 GLVSQEPVLFTG-SIKDNIAYGKDDATT--EEIRVATE-------------------------LANAAKFIDKLPQGIDT 514 (1288)
Q Consensus 463 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~--~~~~~~~~-------------------------~~~~~~~i~~l~~g~~t 514 (1288)
+|++|++.+... ||.+.+..+...... .+.+.+.. .+.+...+..+ |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999865 999999877542211 11111110 02223344444 4444
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEE
Q 000777 515 LVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVI 593 (1288)
Q Consensus 515 ~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l 593 (1288)
. .....+||||||.|++|||||+.+||+|||||||++||.++..++.+.|.+.. + |+|+||||.+++.. |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~-g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYP-G-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCC-C-cEEEEeCCHHHHHHHhhheEEe
Confidence 4 55667999999999999999999999999999999999999999999998763 4 99999999999987 9999999
Q ss_pred eCCEEe-EecChhHHhcCCCchHHHHHHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCccc
Q 000777 594 HRGKIV-EKGTHSKLVEDPEGAYSQLIRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSI 672 (1288)
Q Consensus 594 ~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1288)
+.|++. +.|+++..++. .......+....... . +
T Consensus 224 d~g~l~~y~Gny~~~~~~-----------r~~~~~~~~~~~~~~--~---~----------------------------- 258 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQ-----------KAERLRQEAAAYEKQ--Q---K----------------------------- 258 (530)
T ss_pred cCCceeEecCCHHHHHHH-----------HHHHHHHHHHHHHHH--H---H-----------------------------
Confidence 999875 45555544432 111000000000000 0 0
Q ss_pred ccccCCCCCCcccccCCCCCCCCCCCcccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000777 673 SVSFGLPSGQFADTALGEPAGPSQPTEEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKP 752 (1288)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1288)
..+.... ++
T Consensus 259 ---------------------------------~~~~~~~--------------------------------~i------ 267 (530)
T COG0488 259 ---------------------------------ELAKEQE--------------------------------WI------ 267 (530)
T ss_pred ---------------------------------HHHHHHH--------------------------------HH------
Confidence 0000000 00
Q ss_pred CccchhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHH
Q 000777 753 PHELKKDSRFWALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAAS 832 (1288)
Q Consensus 753 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~ 832 (1288)
.|+
T Consensus 268 -----------------------------------------------------------------------~r~------ 270 (530)
T COG0488 268 -----------------------------------------------------------------------RRG------ 270 (530)
T ss_pred -----------------------------------------------------------------------HHH------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000777 833 VRALVGDALARIVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSI 912 (1288)
Q Consensus 833 i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~ 912 (1288)
T Consensus 271 -------------------------------------------------------------------------------- 270 (530)
T COG0488 271 -------------------------------------------------------------------------------- 270 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHH
Q 000777 913 RTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMT 992 (1288)
Q Consensus 913 ~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~ 992 (1288)
.....+..++
T Consensus 271 ----------------~~~~~~~k~a------------------------------------------------------ 280 (530)
T COG0488 271 ----------------KAAASKAKKA------------------------------------------------------ 280 (530)
T ss_pred ----------------HhccchHHHH------------------------------------------------------
Confidence 0000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccCC-CCCC--CCCCccccCCCccEEEEEEEEECCCCCCcccccceeEE
Q 000777 993 AIGISQSSSFSSDSNKAKSAAASIFAI--IDRESK-IDPS--DESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLK 1067 (1288)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~ri~~~--~~~~~~-~~~~--~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~ 1067 (1288)
+......+++.+- ...+.. ..+. ..+.......+.-++++|+++.|++. +++++|+||.
T Consensus 281 --------------~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~ 344 (530)
T COG0488 281 --------------KSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFR 344 (530)
T ss_pred --------------HHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEE
Confidence 0000000000000 000000 0000 00000001123359999999999643 5799999999
Q ss_pred EeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCC-CCc-hhhHHHHHhcCCCC
Q 000777 1068 IRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEP-VLF-NDTIRANIAYGKGG 1145 (1288)
Q Consensus 1068 I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~-~Lf-~gTIreNl~~g~~~ 1145 (1288)
|.+|++||||||||+|||||+++|.|-..|.+|+|.+.-. + ++||.+|+. .++ +.|+-|++.-.. +
T Consensus 345 i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-v----------~igyf~Q~~~~l~~~~t~~d~l~~~~-~ 412 (530)
T COG0488 345 IDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-V----------KIGYFDQHRDELDPDKTVLEELSEGF-P 412 (530)
T ss_pred ecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-e----------EEEEEEehhhhcCccCcHHHHHHhhC-c
Confidence 9999999999999999999999999999999999998631 2 589999998 444 458999997542 2
Q ss_pred CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHH
Q 000777 1146 DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDAL 1225 (1288)
Q Consensus 1146 ~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L 1225 (1288)
+..+.+++..|...++..-- ..++ ...||||||-|+.||+.++.+|.+|||||||++||.+|...+.++|
T Consensus 413 ~~~e~~~r~~L~~f~F~~~~------~~~~----v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL 482 (530)
T COG0488 413 DGDEQEVRAYLGRFGFTGED------QEKP----VGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEAL 482 (530)
T ss_pred cccHHHHHHHHHHcCCChHH------HhCc----hhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHH
Confidence 33478899888887765331 2333 4579999999999999999999999999999999999999999999
Q ss_pred HHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEe-cChhhhhcC
Q 000777 1226 DRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEK-GKHENLINI 1270 (1288)
Q Consensus 1226 ~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~-Gt~~eLl~~ 1270 (1288)
.++ ..|||+|||+.+.+.. |++|+++++ ++.++ |++++..+.
T Consensus 483 ~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 483 LDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred HhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 987 6799999999999987 999999999 88887 888887764
No 101
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.9e-63 Score=612.71 Aligned_cols=193 Identities=24% Similarity=0.353 Sum_probs=163.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-++++|++++|++ ..|+++||+|++||++||+||||||||||+++|+|+.+|++|+|.++ + ++
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~---~----------~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE---L----------KI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe---e----------eE
Confidence 4899999999953 25999999999999999999999999999999999999999999986 1 59
Q ss_pred EEEccCCCC-chhhHHHHHhcCCCCCC-CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcC
Q 000777 1122 GLVSQEPVL-FNDTIRANIAYGKGGDA-TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVK 1199 (1288)
Q Consensus 1122 ~~V~Qd~~L-f~gTIreNl~~g~~~~~-sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr 1199 (1288)
+|+||++.+ ++.|++||+.++.. .. .+..+.++++..++.+. .......||||||||++|||||++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~L~~l~l~~~-----------~~~~~~~LSGGe~QRvaiAraL~~ 470 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITD-DLGSSYYKSEIIKPLQLERL-----------LDKNVKDLSGGELQRVAIAACLSR 470 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhh-hcChHHHHHHHHHHCCCHHH-----------HhCCcccCCHHHHHHHHHHHHHhc
Confidence 999999864 56799999986421 22 23345666666666543 234456799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecCh
Q 000777 1200 DPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKH 1264 (1288)
Q Consensus 1200 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~ 1264 (1288)
+|+||||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++ ++...|+.
T Consensus 471 ~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 471 DADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeeec
Confidence 9999999999999999999999999998753 7899999999999865 999999964 88777763
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.4e-61 Score=541.90 Aligned_cols=463 Identities=25% Similarity=0.437 Sum_probs=361.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC-HHHHhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ-LQWIRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~r~~ 461 (1288)
.++++|++++|| +..+++||||+|++||+.||+|+||+|||||+++|.|+|+|++|+|++||++++--+ .+++|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999997 467999999999999999999999999999999999999999999999999998654 5678899
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
||+|+|++.|+. .||.|||.+|.+......+........+.+..+++ |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 999999999995 59999999998743111111111222233445555 777777788889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchHHHH
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQL 618 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 618 (1288)
|++||||||||-|-|...+.+++.++.+.+ |+|+|+|||++.++.. |||+-||++|+++..-++ ..+. .-.++
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~~~~---t~~el 233 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--VAET---TEEEL 233 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--CCCC---CHHHH
Confidence 999999999999999999999999999864 7999999999999987 999999999998643211 0000 00000
Q ss_pred HHHHhhcccccccccccccchhhhhhhhcccccccccccccCCCCCCCCCCcccccccCCCCCCcccccCCCCCCCCCCC
Q 000777 619 IRLQEANKESEQTIDGQRKSEISMESLRHSSHRMSLRRSISRGSSIGNSSRHSISVSFGLPSGQFADTALGEPAGPSQPT 698 (1288)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (1288)
.+
T Consensus 234 a~------------------------------------------------------------------------------ 235 (501)
T COG3845 234 AE------------------------------------------------------------------------------ 235 (501)
T ss_pred HH------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccCCchhhHhhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhchHHHHHHHHHHHHHHHHHH
Q 000777 699 EEVAPEVPTRRLAYLNKPEIPVILAGTIAAMANGVILPIYGLLISSVIETFFKPPHELKKDSRFWALIYLALGAGSFLLS 778 (1288)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 778 (1288)
+ .+.
T Consensus 236 -----------l--------------------------------------MvG--------------------------- 239 (501)
T COG3845 236 -----------L--------------------------------------MVG--------------------------- 239 (501)
T ss_pred -----------H--------------------------------------hcC---------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 779 PAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALARIVQNISTAAAGLIIA 858 (1288)
Q Consensus 779 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~ 858 (1288)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 000777 859 FTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKT 938 (1288)
Q Consensus 859 ~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~ 938 (1288)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 939 GIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSSFSSDSNKAKSAAASIFA 1018 (1288)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~ 1018 (1288)
..+
T Consensus 240 ------------------------------------~~v----------------------------------------- 242 (501)
T COG3845 240 ------------------------------------REV----------------------------------------- 242 (501)
T ss_pred ------------------------------------Ccc-----------------------------------------
Confidence 000
Q ss_pred HhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC
Q 000777 1019 IIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD 1098 (1288)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~ 1098 (1288)
..+.. ..+..+ ...-++++|++..-+ + +.+.++||||++++||.+||.|-.|.|-+.|+.+|.|+.+|.
T Consensus 243 --~~~~~-~~~~~p------g~~vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~ 311 (501)
T COG3845 243 --VLRVV-KPPSTP------GEVVLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPA 311 (501)
T ss_pred --ccccc-cCCCCC------CCeEEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccC
Confidence 00000 000001 122489999998643 2 346899999999999999999999999999999999999999
Q ss_pred CceEEECCeec-cCCCHHHHhc-ceEEEccCCC----CchhhHHHHHhcCCCCC--------CCHHHHHHHHHHhchhHH
Q 000777 1099 AGHITLDGVEI-QKLQLKWLRQ-QMGLVSQEPV----LFNDTIRANIAYGKGGD--------ATEAEIQAASEMANAHKF 1164 (1288)
Q Consensus 1099 ~G~I~idG~di-~~i~~~~lR~-~i~~V~Qd~~----Lf~gTIreNl~~g~~~~--------~sd~ei~~al~~a~l~~~ 1164 (1288)
+|+|+++|.|+ ...+...+|+ .++|||.|.+ ..+-|+.||+.++.... .+..++...+ .+.
T Consensus 312 ~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a-----~~l 386 (501)
T COG3845 312 SGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFA-----REL 386 (501)
T ss_pred CceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHH-----HHH
Confidence 99999999997 6667766654 6999999984 56789999998653211 1223333322 233
Q ss_pred HHhh---hccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecC
Q 000777 1165 ICSL---QQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHR 1240 (1288)
Q Consensus 1165 i~~l---p~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHr 1240 (1288)
++++ +.+.++ ...+||||+.||+-+||-|.++|++||..+||.+||..+.+.|.+.|.+.. +|+.|++|+-+
T Consensus 387 i~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~d 462 (501)
T COG3845 387 IEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISED 462 (501)
T ss_pred HHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehh
Confidence 3332 122233 345899999999999999999999999999999999999999999998875 67899999999
Q ss_pred chhhhh-cCEEEEEeCCEEEEecChhh
Q 000777 1241 LSTIKN-ADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1241 l~ti~~-~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|+.+.. ||||.||.+|+|+....+++
T Consensus 463 LDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 463 LDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred HHHHHHhhheeeeeeCCceeccccccc
Confidence 999865 99999999999998887765
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.7e-53 Score=475.56 Aligned_cols=238 Identities=26% Similarity=0.465 Sum_probs=224.3
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcc
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
|.|+|+||+++|+.. ++++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999743 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1121 MGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
|+||||+|.+|++|+++|+.+. ...++++++++++.+++.+++.++|.+|++.++++|.+||||||||+|||||++++
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~--~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPY--GKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred EEEECCCcccchhhHHHHhhhc--cCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999743 23678899999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHH
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
|+||||||||++||+.+++.+++.|++.++++|+|+||||++++..||||++|++|+|+|.|+|++|+++ .+.|++++.
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~ 235 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAIS 235 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHh
Confidence 9999999999999999999999999998889999999999999999999999999999999999999996 689999987
Q ss_pred Hhh
Q 000777 1281 LHS 1283 (1288)
Q Consensus 1281 ~~~ 1283 (1288)
...
T Consensus 236 ~~~ 238 (275)
T cd03289 236 PSD 238 (275)
T ss_pred hcc
Confidence 653
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-52 Score=422.72 Aligned_cols=221 Identities=32% Similarity=0.578 Sum_probs=190.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC-CCHHHHhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE-FQLQWIRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~-~~~~~~r~~ 461 (1288)
-|+++|++++|+ +..||+|||++|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.. .+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999996 4579999999999999999999999999999999999999999999999987743 377889999
Q ss_pred eEEEcCCCCCC-chhHHHHHhcCCCC---CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 462 IGLVSQEPVLF-TGSIKDNIAYGKDD---ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 462 i~~v~Q~~~l~-~~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
+|+|||+..|| +.||.||+.++.-. .+.++.++. +.+.+++. |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~-----A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREK-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHH-----HHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 99999999999 56999999987321 222222111 12334444 555555666689999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCc
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEG 613 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 613 (1288)
+.+|+++++|||||||||+...++.+.++++.+ +.|.|+|||.+.+++. ||||++||+|+|+++|+++++..+|..
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 999999999999999999999999999999975 5799999999999988 999999999999999999999988654
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-51 Score=412.02 Aligned_cols=218 Identities=34% Similarity=0.518 Sum_probs=191.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeecc-CCCHHHHhcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQ-KLQLKWLRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~i 1121 (1288)
|+++||+.+|.+ ..||+|||++|++||+++|+||||||||||+++|.||-+|++|+|.+||.++. +.+...+|+++
T Consensus 3 i~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 3 IEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred EEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 899999999963 46999999999999999999999999999999999999999999999998773 33789999999
Q ss_pred EEEccCCCCch-hhHHHHHhcCCC--CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKG--GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
|+|+|+..||+ -|+.||+.+++. ...+.+ .-.+.|+++|+.|-... .+.+|||||+||+|||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~-----------yP~qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADA-----------YPAQLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhh-----------CccccCcHHHHHHHHH
Confidence 99999999994 799999998741 112322 33455667777665444 3568999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
|||..+|+++++|||||||||+.-.++.+.++++. .|.|.|+|||.+...++ ||||+.||+|+|+|.|+|+++..+|+
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999999987 56799999999999987 99999999999999999999999876
Q ss_pred cH
Q 000777 1273 GF 1274 (1288)
Q Consensus 1273 g~ 1274 (1288)
..
T Consensus 229 ~~ 230 (240)
T COG1126 229 SE 230 (240)
T ss_pred CH
Confidence 43
No 106
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=5.4e-49 Score=444.10 Aligned_cols=198 Identities=29% Similarity=0.409 Sum_probs=164.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|.|+||+|+|++.+ .+++++||-|.++++||+|||||+|||||++++.|...|+.|.|.-.-.. ++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cc
Confidence 499999999998543 79999999999999999999999999999999999999999998664322 23
Q ss_pred EEEcc---CCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1122 GLVSQ---EPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1122 ~~V~Q---d~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
++..| |..-++.|.-|++..-..+.-..++++..+...|+....... ++ ++||+|||.||+.||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHh
Confidence 33334 334567788888863212235677888899999887543332 22 479999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEe-cCh
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEK-GKH 1264 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~-Gt~ 1264 (1288)
+.|.||||||||++||.++-..+.++|.++ ..+||+|+|+...|.+ +++|++.++|.+... |..
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccH
Confidence 999999999999999999999999999886 6799999999999987 999999999988754 443
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-49 Score=423.55 Aligned_cols=221 Identities=36% Similarity=0.569 Sum_probs=191.6
Q ss_pred EEEEeEEEECCCC--CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HH
Q 000777 384 IELRDVYFSYPAR--PNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WI 458 (1288)
Q Consensus 384 i~~~~v~~~y~~~--~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~ 458 (1288)
|+++||++.|+.. +...+|+||||+|++||+.||+|+||+|||||++++.++..|++|+|.+||+|+..++.. .+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999752 235689999999999999999999999999999999999999999999999999877754 56
Q ss_pred hcceEEEcCCCCCCc-hhHHHHHhcCCCCC--CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000777 459 RKKIGLVSQEPVLFT-GSIKDNIAYGKDDA--TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 459 r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 531 (1288)
|++||++||++.|++ .||++|++|+.+-. +. +++.+.++.+ |+....+..+.+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelV-----------gL~dk~~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELV-----------GLSDKADRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHc-----------CChhhhccCchhcCcchhhHH
Confidence 789999999999986 79999999985432 22 2333444444 444445566689999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
+|||||..+|+||+.|||||||||+|.+.|.+.|+++.+ +-|+++|||.++.++. |||+.||++|+++|.|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999988764 6799999999999988 9999999999999999999999
Q ss_pred cCCCchH
Q 000777 609 EDPEGAY 615 (1288)
Q Consensus 609 ~~~~~~~ 615 (1288)
.+|...-
T Consensus 231 ~~Pk~~~ 237 (339)
T COG1135 231 ANPKHAI 237 (339)
T ss_pred cCcchHH
Confidence 8875433
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-49 Score=419.90 Aligned_cols=222 Identities=35% Similarity=0.539 Sum_probs=192.4
Q ss_pred EEEEEEEEECCCC--CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC---HHHH
Q 000777 1043 IELHHVSFKYPSR--PDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ---LKWL 1117 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~--~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~l 1117 (1288)
|+|+|||+.|+.. ...++|+||||+|++||+.||+|+||||||||++++.|+-.|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999852 1246999999999999999999999999999999999999999999999999887665 6778
Q ss_pred hcceEEEccCCCCch-hhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1118 RQQMGLVSQEPVLFN-DTIRANIAYGKG-GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1118 R~~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
|++||+|+|++.|++ .|+.+|++|... ...+.+ ++.+.|+.+|+.|. .+..+.+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk-----------~~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDK-----------ADRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hccCchhcCcchhhHH
Confidence 899999999999997 899999997421 123344 34455666666554 3445679999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
+|||||..+|+||++|||||||||+|-+.|.+.|++.- -+-|+++|||.++.+++ |||+.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998764 36799999999999987 9999999999999999999999
Q ss_pred cCCCcHH
Q 000777 1269 NIPDGFY 1275 (1288)
Q Consensus 1269 ~~~~g~y 1275 (1288)
.+|+..-
T Consensus 231 ~~Pk~~~ 237 (339)
T COG1135 231 ANPKHAI 237 (339)
T ss_pred cCcchHH
Confidence 9876543
No 109
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-49 Score=407.67 Aligned_cols=219 Identities=35% Similarity=0.566 Sum_probs=192.5
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+|+|||++|. ++.+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++...+|++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999996 467999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCC-chhHHHHHhcCCC--CCCHHH----HHHHHHHcCHHHHHHhCCCCccc--cccCCCCCCChHHHHHHHHH
Q 000777 464 LVSQEPVLF-TGSIKDNIAYGKD--DATTEE----IRVATELANAAKFIDKLPQGIDT--LVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 464 ~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGqkqri~lA 534 (1288)
||-|..-|| +.||.|||++-.. ..+.++ +.+.+++. |++- ...+.+.+|||||+|||.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lv-----------gL~p~~~~~RyP~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLV-----------GLDPSEYADRYPHELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHh-----------CCCHHHHhhcCchhcCcchhhHHHHH
Confidence 999999999 5699999997532 123332 33333333 3332 34555679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDP 611 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 611 (1288)
|||..+|+|+++|||++||||.++..+|+.+.++.+ ++|+|+||||+++.-+ +|||.+|++|+|+..++|++++.+|
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999988865 6899999999999765 9999999999999999999999987
Q ss_pred CchHH
Q 000777 612 EGAYS 616 (1288)
Q Consensus 612 ~~~~~ 616 (1288)
...|-
T Consensus 228 an~FV 232 (309)
T COG1125 228 ANDFV 232 (309)
T ss_pred cHHHH
Confidence 65554
No 110
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-48 Score=449.28 Aligned_cols=228 Identities=31% Similarity=0.498 Sum_probs=201.3
Q ss_pred CCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeecc--
Q 000777 1038 DVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQ-- 1110 (1288)
Q Consensus 1038 ~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~-- 1110 (1288)
+..+.|+|+||+++|++. .+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+.
T Consensus 76 ~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 345689999999999743 3479999999999999999999999999999999999997 57999999999997
Q ss_pred CCCHHHHhcceEEEccCCCCchhhHHHHHhcCCC-CCCCHHHH-----HHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1111 KLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDATEAEI-----QAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1111 ~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~sd~ei-----~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
.+++..+|++++||||+|.+|++|++|||.+++. ...++++. +++++.++++ +++++.++++|.+||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LS 227 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALS 227 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCC
Confidence 4566789999999999999999999999997632 12444443 4455666553 445678899999999
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 000777 1185 GGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGK 1263 (1288)
Q Consensus 1185 gGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt 1263 (1288)
||||||+|||||++++|+|||||||||+||+++...+++.|++..+++|+|+|||+++++.. ||||+||++|+|+|.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999889999999999999987 99999999999999999
Q ss_pred hhhhhcCCCc
Q 000777 1264 HENLINIPDG 1273 (1288)
Q Consensus 1264 ~~eLl~~~~g 1273 (1288)
++++..++..
T Consensus 308 ~~~l~~~~~~ 317 (329)
T PRK14257 308 TKTIFIHPKN 317 (329)
T ss_pred HHHHhcCCCc
Confidence 9999987553
No 111
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.5e-48 Score=434.29 Aligned_cols=236 Identities=28% Similarity=0.506 Sum_probs=218.8
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
|.|+++|++++|+. +++++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~-~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTE-GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCC-CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 46899999999963 24579999999999999999999999999999999999997 78999999999999999999999
Q ss_pred eEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 462 IGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 462 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
|+||||+|++|++|+++|+....+ .++++++++++.+++.+++..+|+|+++.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999974322 4678899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHHHH
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLIRL 621 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 621 (1288)
+||||||||++||+.+++.+++.|++..+++|+|+||||++++..||||++|++|++++.|++++++++ .+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999999999986 5777777643
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-49 Score=396.61 Aligned_cols=221 Identities=33% Similarity=0.513 Sum_probs=201.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC-----ceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDA-----GHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--i~~ 1114 (1288)
.++++||++-|. +..+|+|||++|++++.+|++|||||||||++++|.|+.+..+ |+|.+||.||-+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 3469999999999999999999999999999999999999886 999999999965 689
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCCC-----CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKGG-----DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
..+|++||+|+|.|.-|+.||+||++||..- ..-|+-++++|+.|.|||-+.. . +.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---r----L~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---R----LHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---H----hhCCccCCChhHHH
Confidence 9999999999999999999999999998421 1235568899999999998753 3 45667889999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
||||||||.-+|+|||||||||||||.+...|.+.|.++.++-|+|+|||.+.-..+ +|+...+..|+++|+|+-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999989999999999998765 9999999999999999999999
Q ss_pred cCCC
Q 000777 1269 NIPD 1272 (1288)
Q Consensus 1269 ~~~~ 1272 (1288)
.+|.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8764
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-48 Score=392.61 Aligned_cols=221 Identities=34% Similarity=0.526 Sum_probs=199.2
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC-----cEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQA-----GEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~-----G~i~~~g~~~~~--~~ 454 (1288)
..++++|+++.|+ ++.+|+|||++|++++++|++||||||||||++++.|+.+... |+|.++|+||.+ .+
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 4689999999996 4579999999999999999999999999999999999998765 999999999975 57
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCCC------CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA------TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
...+|++||+|||.|.-|+.||+||++||..-. -++.++++++.+.+.+.++. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 889999999999999999999999999984321 12457788888888776543 25577889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||+||||||.-+|+|||||||||||||.+...|.+.|.+++++-|+|+|||.+....+ +|+..++..|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999988999999999999876 999999999999999999999
Q ss_pred hcCCC
Q 000777 608 VEDPE 612 (1288)
Q Consensus 608 ~~~~~ 612 (1288)
..+|.
T Consensus 236 F~~P~ 240 (253)
T COG1117 236 FTNPK 240 (253)
T ss_pred hcCcc
Confidence 98754
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-47 Score=396.37 Aligned_cols=221 Identities=33% Similarity=0.519 Sum_probs=194.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCc-hhhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhH--HHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1123 LVSQEPVLF-NDTIRANIAYGKG-GDATEA----EIQAASEMANAHK--FICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1123 ~V~Qd~~Lf-~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~--~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
||-|..-|| +-||.|||++-+. ...+.+ ++.+.++++++.. |.. ..+..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~-----------RyP~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYAD-----------RYPHELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhh-----------cCchhcCcchhhHHHHH
Confidence 999999999 5799999986421 123444 4555666666642 333 34568999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhh-hhcCEEEEEeCCEEEEecChhhhhcCC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTI-KNADMIAVVKNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~Gt~~eLl~~~ 1271 (1288)
|||..+|+||+||||.+||||-+...+|+-+.+..+ ++|+|+|||+++.. +-+|||.||++|+|+++|+|++++++|
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999887653 68999999999886 569999999999999999999999997
Q ss_pred CcHHHH
Q 000777 1272 DGFYAS 1277 (1288)
Q Consensus 1272 ~g~y~~ 1277 (1288)
..-|-+
T Consensus 228 an~FV~ 233 (309)
T COG1125 228 ANDFVE 233 (309)
T ss_pred cHHHHH
Confidence 766544
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.3e-46 Score=415.95 Aligned_cols=235 Identities=47% Similarity=0.810 Sum_probs=217.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 346999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCC
Q 000777 1123 LVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPK 1202 (1288)
Q Consensus 1123 ~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ 1202 (1288)
|+||++.+|+.|++||+.++.. ..+.+++.++++..++.+++..+|.|+++..+..+.+||||||||++||||++++|+
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ 158 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADP-GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPR 158 (237)
T ss_pred EEcCCchhccchHHHHhhccCC-CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999987532 345667888888899999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHH
Q 000777 1203 ILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1203 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
+|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|++++.
T Consensus 159 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 159 ILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 99999999999999999999999998778999999999999988999999999999999999999986 788888765
No 116
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.1e-46 Score=418.86 Aligned_cols=241 Identities=35% Similarity=0.595 Sum_probs=223.4
Q ss_pred CCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHh
Q 000777 1039 VKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLR 1118 (1288)
Q Consensus 1039 ~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 1118 (1288)
..|.|+++||+++|+.. +.++|+|+||+|+|||.+||+|+||||||||+++|+|+++|++|+|++||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999742 24699999999999999999999999999999999999999999999999999998888999
Q ss_pred cceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1119 QQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
++++|++|+|.+|++|++||+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++||||++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC--KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC--CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 9999999999999999999997542 23566788899999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHH
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASL 1278 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1278 (1288)
++|++|||||||++||++++..+.+.|++..+++|+|++||+++.+..||||++|++|++++.|+++++++..++.|+++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 99999999999999999999999999998777899999999999998899999999999999999999998777889988
Q ss_pred HHHh
Q 000777 1279 IALH 1282 (1288)
Q Consensus 1279 ~~~~ 1282 (1288)
+..+
T Consensus 253 ~~~~ 256 (257)
T cd03288 253 VRTD 256 (257)
T ss_pred Hhcc
Confidence 7643
No 117
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-46 Score=427.51 Aligned_cols=227 Identities=30% Similarity=0.492 Sum_probs=197.4
Q ss_pred CCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC-
Q 000777 379 DIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE- 452 (1288)
Q Consensus 379 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~- 452 (1288)
+..+.|+++|++++|+. ..+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 76 ~~~~~i~~~nls~~y~~-~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMN-RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecC-CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 44568999999999963 23579999999999999999999999999999999999996 579999999999974
Q ss_pred -CCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--CCHHHH-----HHHHHHcCHHHHHHhCCCCccccccCCCCCCC
Q 000777 453 -FQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--ATTEEI-----RVATELANAAKFIDKLPQGIDTLVGEHGTQLS 524 (1288)
Q Consensus 453 -~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~~~~~-----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 524 (1288)
.+...+|+.++||||+|++|++|++|||.|+... .++++. ..+++.++ +++++++.+++++.+||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LS 227 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALS 227 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCC
Confidence 4556788999999999999999999999986421 233332 23333333 34466788999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecC
Q 000777 525 GGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 525 gGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 603 (1288)
||||||++||||++++|+||||||||++||+++.+.+++.|+++.+++|+|+|||+++++.. ||||++|++|+|++.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999987 99999999999999999
Q ss_pred hhHHhcCCCc
Q 000777 604 HSKLVEDPEG 613 (1288)
Q Consensus 604 ~~~l~~~~~~ 613 (1288)
++++..++..
T Consensus 308 ~~~l~~~~~~ 317 (329)
T PRK14257 308 TKTIFIHPKN 317 (329)
T ss_pred HHHHhcCCCc
Confidence 9999876543
No 118
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3e-46 Score=385.17 Aligned_cols=224 Identities=34% Similarity=0.536 Sum_probs=191.4
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HH
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WI 458 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~ 458 (1288)
..|++++|+++|+ ++.||+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|+|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 4699999999996 46799999999999999999999999999999999999999999999999999988764 46
Q ss_pred hcceEEEcCCCCCCch-hHHHHHhcCCCCC---CHHHHHH----HHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000777 459 RKKIGLVSQEPVLFTG-SIKDNIAYGKDDA---TTEEIRV----ATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 459 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~---~~~~~~~----~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
|+++|++||+-.||+. ||+||+.|...++ +++.+.+ .++.+++.... ....+.+||||++.|
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~----------~~~~PsELSGGM~KR 153 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAA----------ADLYPSELSGGMRKR 153 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhh----------hhhCchhhcchHHHH
Confidence 8999999999999965 9999999975433 2333322 23334433331 233457999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
+|||||+..||+++++|||||+|||.+...+.+.|+++.+ +.|+++|||+++++.. ||||+++.+|+|+..|+++|+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988865 5799999999999976 999999999999999999999
Q ss_pred hcCCCchHHHH
Q 000777 608 VEDPEGAYSQL 618 (1288)
Q Consensus 608 ~~~~~~~~~~~ 618 (1288)
.+.++...+++
T Consensus 234 ~~sd~P~v~qf 244 (263)
T COG1127 234 LASDDPWVRQF 244 (263)
T ss_pred HhCCCHHHHHH
Confidence 98755444443
No 119
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7e-46 Score=414.45 Aligned_cols=218 Identities=31% Similarity=0.566 Sum_probs=193.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++||+++|++. .+++|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.+||.+++++++.. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999631 2999999999999999999999999999999999999999999999999999998875 589
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCCCC------HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDDAT------TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
|+|||+..||+ +||+|||.|+..... ++++.++++..++.+.+++.| .+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 99999999995 699999999965432 356667777776666665554 699999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
||+++|++++||||+|+||++.+..+...|+++.+ +.|+|.||||..++.. +|||+||++|+|.+.|+|.|+.++|.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999988988765 4799999999999876 99999999999999999999998876
Q ss_pred chHH
Q 000777 613 GAYS 616 (1288)
Q Consensus 613 ~~~~ 616 (1288)
..|.
T Consensus 227 n~fV 230 (338)
T COG3839 227 NLFV 230 (338)
T ss_pred chhh
Confidence 5543
No 120
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.6e-45 Score=409.47 Aligned_cols=211 Identities=27% Similarity=0.358 Sum_probs=170.1
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcc
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
..+++.+|+|.|+.. +.+.++++++.+..-+++++||++|+||||+++++.+-..|..|.+-+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~-~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPS-EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCc-chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 359999999999743 22799999999999999999999999999999999999999999888865 678
Q ss_pred eEEEccCCCCc-hhhHHH--HHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHH
Q 000777 1121 MGLVSQEPVLF-NDTIRA--NIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAI 1197 (1288)
Q Consensus 1121 i~~V~Qd~~Lf-~gTIre--Nl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1197 (1288)
|+|-.|.-+=| +-.+.. -+.-. .+..+++|+++.|...|+..-+...+ -..||||||=|+++|-..
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~-~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKS-FPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACT 497 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHh-CCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHh
Confidence 99999976422 222211 11100 12348999999999888765543321 246999999999999999
Q ss_pred cCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcHHH
Q 000777 1198 VKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGFYA 1276 (1288)
Q Consensus 1198 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~ 1276 (1288)
..+|.+|||||||+.||.++-..+-++|+.+ +.-||+|||+.+.+.. |+.++|.++|+|.- ++-....|+
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~-------ieg~~~~yK 568 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTP-------IEGGIDKYK 568 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEe-------eeccHHHHH
Confidence 9999999999999999999999999999886 5689999999999987 99999999999976 221122477
Q ss_pred HHHHHhh
Q 000777 1277 SLIALHS 1283 (1288)
Q Consensus 1277 ~L~~~~~ 1283 (1288)
++...+.
T Consensus 569 kl~~~e~ 575 (582)
T KOG0062|consen 569 KLLGAEL 575 (582)
T ss_pred HHHHHHH
Confidence 7766554
No 121
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-45 Score=381.73 Aligned_cols=228 Identities=32% Similarity=0.501 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC-CHHHHhc
Q 000777 1042 EIELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL-QLKWLRQ 1119 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i-~~~~lR~ 1119 (1288)
.++++|+++.|+.+. -.++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.+||.++... +....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997431 01599999999999999999999999999999999999999999999999877543 3446888
Q ss_pred ceEEEccCCCC-c--hhhHHHHHh----cCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1120 QMGLVSQEPVL-F--NDTIRANIA----YGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1120 ~i~~V~Qd~~L-f--~gTIreNl~----~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
.|.+|+|||.- + .-||++-|. .+. -+-..++++++++.+|+.+-. .......||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~-~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHG-LSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCC-ccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHHHHHH
Confidence 99999999951 1 235555553 211 123456799999999987543 33456689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCc--eEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNR--TTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~--TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||.-+|++||||||||+||.-..+.|++.|.+..+++ |.|+|||+++.+.. ||||+||++|+++|.++-.++.+
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999999987665 99999999999987 99999999999999999999998
Q ss_pred CCCcHHHHHHH
Q 000777 1270 IPDGFYASLIA 1280 (1288)
Q Consensus 1270 ~~~g~y~~L~~ 1280 (1288)
.+...|.+..-
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 86777776543
No 122
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6.5e-45 Score=404.30 Aligned_cols=234 Identities=49% Similarity=0.807 Sum_probs=213.0
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999632 356999999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000777 464 LVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRI 543 (1288)
Q Consensus 464 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~i 543 (1288)
|++|++++|+.|++||+.++.+....+++...++..++.++++.+|.|+++..+..+.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987654455566677777888899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHH
Q 000777 544 LLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 544 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 619 (1288)
+||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+++++.++ .+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHH
Confidence 9999999999999999999999998778899999999999977999999999999999999999876 56666544
No 123
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-42 Score=373.59 Aligned_cols=471 Identities=20% Similarity=0.223 Sum_probs=348.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000777 109 FVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQL 188 (1288)
Q Consensus 109 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~ 188 (1288)
++++.+.-.+.+.+........+++...++|.++.++++..|+.-+++- .+++++.++++|+..|.-.+ ..++.+.+.
T Consensus 54 f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~-~~~rlla~L~~Dvr~ISf~~-s~lp~~~qa 131 (546)
T COG4615 54 FLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERL-GSARLLAGLTSDVRNISFAF-SRLPELVQA 131 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHh-cccchhhhhcccccceeehH-hhhHHHHHH
Confidence 4444444555566666777788999999999999999999999999974 89999999999999998444 456778888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH--
Q 000777 189 MATFLGGFLIAFIKGWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYAKAASVVEQTIGSIRTVASFTGEKQAM-- 266 (1288)
Q Consensus 189 ~~~~~~~~i~~~~~~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~-- 266 (1288)
+...+++.+.++++|+++.++.++.+.+..+...+...+..+......+..++..+..+..+.|.|..+......+..
T Consensus 132 ~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~ 211 (546)
T COG4615 132 IILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHN 211 (546)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHh
Confidence 888999999999999999888887777777777777777777777777888899999999999999998775433322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 267 SNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNGGQVVNVMVAVLTGSMSLGEASPCLSA 346 (1288)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (1288)
+.|....+...+..............+.+++.+....+++|..... +.-+.....++....+.+..|+.++...++.
T Consensus 212 ~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vgilP~ 288 (546)
T COG4615 212 NLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVGILPT 288 (546)
T ss_pred hhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHhhhhH
Confidence 1222111111111111111111112223333333333444443222 1112223334444455556788888889999
Q ss_pred HHHHHHHHHHHHHHhccCCCCccCCCCCcccCCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHH
Q 000777 347 FGAGQAAAFKMFETINRKPEIDAYDTKGKILDDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKS 426 (1288)
Q Consensus 347 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKS 426 (1288)
+..|.+|.+++.++-..++..+-... .+.+++ ..|+++||.|+|+.. ..-+..||++|++||++-|+|.||||||
T Consensus 289 l~~AqvA~~kiakle~~~~~a~~~~~--q~~p~~-~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKS 363 (546)
T COG4615 289 LLTAQVAFNKIAKLELAPYKADFPRP--QAFPDW-KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKS 363 (546)
T ss_pred HHHHHHHHHHHHHhhcCCccccCCCC--CcCCcc-cceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHH
Confidence 99999999999887543332211111 112222 369999999999732 3557889999999999999999999999
Q ss_pred HHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCCC-CCHHHHHHHHHHcCHHHHH
Q 000777 427 TVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD-ATTEEIRVATELANAAKFI 505 (1288)
Q Consensus 427 Tl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~~~~i 505 (1288)
|++++|.|+|.|++|+|++||+++..-++++.|+-++-|+-|.|||..++ |.+. ++.+.+...++...+....
T Consensus 364 T~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~kt 437 (546)
T COG4615 364 TLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHKT 437 (546)
T ss_pred HHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999998755 4444 5666666555544433322
Q ss_pred HhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchh
Q 000777 506 DKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLST 583 (1288)
Q Consensus 506 ~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~ 583 (1288)
++.+|--+ ...||-|||.|+|+--|++-+.||++|||=-+--||.=++++.+.+..+. .|||++.||||=..
T Consensus 438 -sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~Y 511 (546)
T COG4615 438 -SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHY 511 (546)
T ss_pred -cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchh
Confidence 22222111 24699999999999999999999999999999999999999988775543 48999999999999
Q ss_pred hhhcCEEEEEeCCEEeEe
Q 000777 584 VRNADMIAVIHRGKIVEK 601 (1288)
Q Consensus 584 ~~~~d~i~~l~~G~i~~~ 601 (1288)
...|||++.+++|+++|.
T Consensus 512 F~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 512 FIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhHHHHHHHhcCceeec
Confidence 999999999999999874
No 124
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-45 Score=403.67 Aligned_cols=233 Identities=60% Similarity=0.953 Sum_probs=214.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCC
Q 000777 1123 LVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPK 1202 (1288)
Q Consensus 1123 ~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ 1202 (1288)
|+||++.+|+.|++||+.++.. ..+.+++.++++..++.+++..+|.|+++.++..+..||||||||++|||||+++|+
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 158 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRP-GATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPP 158 (234)
T ss_pred EeCCCCeeccccHHHHhhccCC-CCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999988632 345667778888889999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHH
Q 000777 1203 ILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASL 1278 (1288)
Q Consensus 1203 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1278 (1288)
+|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++... .+.|+.+
T Consensus 159 lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 159 ILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 99999999999999999999999998888999999999999988999999999999999999999876 6666654
No 125
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-45 Score=397.48 Aligned_cols=214 Identities=32% Similarity=0.518 Sum_probs=189.7
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++|+|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999996 46799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCC-CCchhHHHHHhcCCCCC-------CH---HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000777 463 GLVSQEPV-LFTGSIKDNIAYGKDDA-------TT---EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 463 ~~v~Q~~~-l~~~ti~~ni~~~~~~~-------~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 531 (1288)
|||||++. -|..||+|-+.+|+-.+ ++ +.+.++++..++.++ ..+...+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~l-----------a~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHL-----------ADRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHH-----------hcCcccccChhHHHHH
Confidence 99999974 56779999999985321 22 235555666655554 3445678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-hcCEEEEEeCCEEeEecChhHHh
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVR-NADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
.|||||+++|+||+||||||+||.....++++.++++.+ ++|+|+|.|+++... .||++++|++|+++..|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999999999999999999999874 589999999999875 59999999999999999999987
Q ss_pred cC
Q 000777 609 ED 610 (1288)
Q Consensus 609 ~~ 610 (1288)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 126
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.2e-45 Score=399.16 Aligned_cols=221 Identities=38% Similarity=0.625 Sum_probs=207.1
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcc
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
|.|+++|++++|+.. ++++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 458999999999743 3469999999999999999999999999999999999999999999999999998888889999
Q ss_pred eEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1121 MGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
++|+||++.+|++|++||+.+.. ..+.+++.++++..++.+++.++|.|+++.+++.+.+||||||||++|||||+++
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~--~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG--EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC--CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999998652 3567889999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecCh
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKH 1264 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~ 1264 (1288)
|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999999998778999999999999989999999999999998863
No 127
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-44 Score=402.49 Aligned_cols=235 Identities=56% Similarity=0.853 Sum_probs=217.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 236999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCC
Q 000777 1123 LVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPK 1202 (1288)
Q Consensus 1123 ~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ 1202 (1288)
|++|++.+|++|++||+.++.. ..+++++.++++..++.+++..+|.|+++.+.....+||||||||++|||||+++|+
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ 157 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRP-DATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPP 157 (236)
T ss_pred EECCCChhhcchHHHHHhhcCC-CCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999988632 456777888899999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHHH
Q 000777 1203 ILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 1281 (1288)
Q Consensus 1203 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1281 (1288)
+|||||||++||+++...+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++..+ .+.|+.++..
T Consensus 158 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 158 ILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 99999999999999999999999988778899999999999988999999999999999999999885 6778777654
No 128
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=415.15 Aligned_cols=219 Identities=34% Similarity=0.564 Sum_probs=194.2
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
..++++||+++|+ +..+++|+||+|++||+++++|||||||||+|++|+|+.+|++|+|.+||+++..++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999996 46799999999999999999999999999999999999999999999999999998876 468
Q ss_pred eEEEcCCCCCC-chhHHHHHhcCCCC---CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 462 IGLVSQEPVLF-TGSIKDNIAYGKDD---ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 462 i~~v~Q~~~l~-~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
|++|||+..|| +.||+|||.||... ..+ +++.++++.+++.++-.+. +.+|||||+|||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----------p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRK-----------PHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhC-----------hhhhChHHHHHHHH
Confidence 99999999999 57999999999761 121 3566777777766655554 46999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
||||..+|++||||||.||||.+-+..++..++++.+ +.|.|+|||+.++... +|||+||++|+|...|+|+|+...
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999999999888754 6899999999998765 999999999999999999999998
Q ss_pred CCchHH
Q 000777 611 PEGAYS 616 (1288)
Q Consensus 611 ~~~~~~ 616 (1288)
|...|.
T Consensus 228 P~~~fV 233 (352)
T COG3842 228 PATRFV 233 (352)
T ss_pred cchHHH
Confidence 765543
No 129
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.2e-44 Score=402.35 Aligned_cols=236 Identities=67% Similarity=1.060 Sum_probs=214.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++..+.++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997432346999999999999999999999999999999999999999999999999998888878888999
Q ss_pred EEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCC
Q 000777 1123 LVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPK 1202 (1288)
Q Consensus 1123 ~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ 1202 (1288)
|+||++.+|+.|++||+.++.. ....+++.+.++..++.+++..+|.|+++.++....+||||||||++|||||+.+|+
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 159 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKP-DATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPK 159 (238)
T ss_pred EECCchhhhhhhHHHHhhccCC-CCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999987632 345667778888889999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHHHHHH
Q 000777 1203 ILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1203 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
+|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+.+++... .+.+++++.
T Consensus 160 llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 236 (238)
T cd03249 160 ILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLVK 236 (238)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHhh
Confidence 99999999999999999999999987778899999999999988999999999999999999999875 566666553
No 130
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-42 Score=372.60 Aligned_cols=476 Identities=21% Similarity=0.239 Sum_probs=369.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHHhhHHHHHHHHHHHHHH
Q 000777 764 ALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPEHSSGAIGARLSADAASVRALVGDALAR 843 (1288)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~ 843 (1288)
...++++.+...+.+.+........++....++|.++.++++..|+.-+++ ...++++.++++|+.++. +-...++.
T Consensus 51 l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 51 LPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhHH
Confidence 444555556666677777888889999999999999999999999999985 789999999999999998 55566778
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHH-
Q 000777 844 IVQNISTAAAGLIIAFTASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVANDAVGSIRTVASFCAEE- 922 (1288)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~- 922 (1288)
+.++++..+++++.+.+.|+++.++.++.+.+..+..++.+....+.....++...+..+..+..++|.++++..+.-.
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 9999999999999999999999999888888888888888888777788888889999999999999999988654322
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 923 -KVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKVFFSLTMTAIGISQSSS 1001 (1288)
Q Consensus 923 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1288)
...+.|....+...+...+.+.........++.+.+......+|....+... +......+...+.+...|+.+...
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~---st~~a~tivlvlLflr~pL~s~vg 284 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGWA---STNVAATIVLVLLFLRTPLLSAVG 284 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---hhhHHHHHHHHHHHHhhHHHHHHh
Confidence 2223333333333322222222221223344455555555566665544332 222333355566777889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccccCCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCC
Q 000777 1002 FSSDSNKAKSAAASIFAIIDRESKIDPSDESGTILEDVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESG 1081 (1288)
Q Consensus 1002 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SG 1081 (1288)
..+....+..+.+++.++-..++...-..+ .. .|+. ..|+++||.|+|++. .--+..||++|++||.|-|+|.||
T Consensus 285 ilP~l~~AqvA~~kiakle~~~~~a~~~~~-q~-~p~~-~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NG 359 (546)
T COG4615 285 ILPTLLTAQVAFNKIAKLELAPYKADFPRP-QA-FPDW-KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNG 359 (546)
T ss_pred hhhHHHHHHHHHHHHHHhhcCCccccCCCC-Cc-CCcc-cceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCC
Confidence 999999999999999987653332211111 11 1222 359999999999743 245788999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhch
Q 000777 1082 SGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANA 1161 (1288)
Q Consensus 1082 sGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l 1161 (1288)
|||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|.+||+.++ |+...++++.+...++...+
T Consensus 360 sGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel 433 (546)
T COG4615 360 SGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLEL 433 (546)
T ss_pred CcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999765 54334788888887776665
Q ss_pred hHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEec
Q 000777 1162 HKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAH 1239 (1288)
Q Consensus 1162 ~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaH 1239 (1288)
..-. ++.+|-=+ ...||-|||.|+|+--|++-+.+|++|||=-+--||.=.+...+.+-... .|+|++.|||
T Consensus 434 ~~kt-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsH 507 (546)
T COG4615 434 AHKT-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISH 507 (546)
T ss_pred hhhh-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEec
Confidence 4432 22222111 24799999999999999999999999999999999999999888765443 5899999999
Q ss_pred CchhhhhcCEEEEEeCCEEEEec
Q 000777 1240 RLSTIKNADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1240 rl~ti~~~DrI~vl~~G~Ive~G 1262 (1288)
+-.-...|||++.|++|+++|.-
T Consensus 508 Dd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 508 DDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred CchhhhhHHHHHHHhcCceeecc
Confidence 99999999999999999999863
No 131
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.8e-45 Score=418.43 Aligned_cols=226 Identities=29% Similarity=0.489 Sum_probs=193.5
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH---Hh
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW---LR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1118 (1288)
|+++||+++|++.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999998886544 58
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
++|+||||++.+|. .|++||+.++.. ...+ ++++.++++.+++.++.. ..+..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~-----------~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHD-----------SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999995 799999986421 1122 234667777777765533 335689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+.+|+|||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.++. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999754 7899999999999966 99999999999999999999987
Q ss_pred CCCcHH-HHHH
Q 000777 1270 IPDGFY-ASLI 1279 (1288)
Q Consensus 1270 ~~~g~y-~~L~ 1279 (1288)
++...+ ++++
T Consensus 231 ~p~~~~~~~~~ 241 (343)
T TIGR02314 231 HPKTPLAQKFI 241 (343)
T ss_pred CCCcHHHHHHH
Confidence 655444 4444
No 132
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.6e-45 Score=393.63 Aligned_cols=215 Identities=33% Similarity=0.501 Sum_probs=193.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.++++||+|+|++ +++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.|+.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3789999999973 4799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCC-CCchhhHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1122 GLVSQEP-VLFNDTIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1122 ~~V~Qd~-~Lf~gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+||||++ .-|.-|++|=+.+|+.+ +.+++.+.+|++..++.++..+ .-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHH
Confidence 9999996 56678999999888532 1123357888999999888543 2346999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhh-hhcCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTI-KNADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
.|||||.++|+||+||||||+||.....+|++.+++.. +++|+|+|.|++... +.||++++|++|+|+..|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 368999999999876 559999999999999999999988
Q ss_pred cC
Q 000777 1269 NI 1270 (1288)
Q Consensus 1269 ~~ 1270 (1288)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 63
No 133
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-44 Score=444.83 Aligned_cols=213 Identities=25% Similarity=0.387 Sum_probs=174.9
Q ss_pred EEEEEEEECCC-CCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC--CCCceEEECCeeccCCCHHHHhcc
Q 000777 1044 ELHHVSFKYPS-RPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD--PDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1044 ~~~nVsf~Y~~-~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
..+|+.|.-+. ...+..|+|||=-++||-.+||+|+||||||||+++|.|=.. -.+|+|+|||.+..+ +..++.
T Consensus 789 ~w~dl~~~~~~qG~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~ 865 (1391)
T KOG0065|consen 789 YWVDLPYEMPIQGGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARV 865 (1391)
T ss_pred EEEeCCccccccccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccc
Confidence 34444443321 124579999999999999999999999999999999998643 247899999998865 789999
Q ss_pred eEEEccCC-CCchhhHHHHHhcCC----CCCCCHHH----HHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1121 MGLVSQEP-VLFNDTIRANIAYGK----GGDATEAE----IQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1121 i~~V~Qd~-~Lf~gTIreNl~~g~----~~~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+|||.|++ ++=.-||||-|.|.. +.+.+++| ++++.+..++.++- |..||..|..||..||.||
T Consensus 866 ~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrL 938 (1391)
T KOG0065|consen 866 SGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRL 938 (1391)
T ss_pred cceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhcee
Confidence 99999976 677789999997641 23444443 56666666665553 5679999999999999999
Q ss_pred HHHHHHcCCC-CEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhh--hhcCEEEEEeC-CEEEEecChhh
Q 000777 1192 AIARAIVKDP-KILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTI--KNADMIAVVKN-GVIVEKGKHEN 1266 (1288)
Q Consensus 1192 aiARALlr~p-~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti--~~~DrI~vl~~-G~Ive~Gt~~e 1266 (1288)
.||=-|+.|| .||+||||||+||+++...|.+.+++.. .|+||++.=|..+.. +..|+++.|++ |+.|-.|+..+
T Consensus 939 TIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 939 TIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred eEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 9999999999 9999999999999999999999999986 789999999999863 67999999975 89998887543
No 134
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-44 Score=397.92 Aligned_cols=227 Identities=49% Similarity=0.856 Sum_probs=211.2
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcc
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
+.|+++|++++|++ .+++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 35899999999963 2359999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1121 MGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
++|+||++.+|++|++||+.++.. ...++++.++++..++.+++..+|.|+++.++....+||||||||++|||||+++
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~ 157 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRP-NATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRD 157 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCC-CCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999987632 3456778888999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+.++++++
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 158 PKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 9999999999999999999999999998778999999999999988999999999999999999998765
No 135
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=7.9e-45 Score=356.00 Aligned_cols=209 Identities=32% Similarity=0.551 Sum_probs=187.0
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
+.+++|.|+|... =-..+++|++||++||+||||||||||+++|+||..|.+|+|.|+|+|....++.+ +-++
T Consensus 2 l~L~~V~~~y~~~-----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHL-----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVS 74 (231)
T ss_pred ccccceEEeeCcc-----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChh
Confidence 5678999999632 13678999999999999999999999999999999999999999999998776653 4799
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCC-CC-----CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKD-DA-----TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~-~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
+++|+..||. .||++||.+|.. .. ..+++..++..+++..+.+++|. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999995 699999999943 21 23668888999999999999984 899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|+++-+||+||||+|+|||.-+.++...+..++. +.|+++|||.++.+.. +|+++++++|+|.++|+.++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999999999999999988874 5699999999999976 999999999999999999999875
No 136
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3e-45 Score=362.64 Aligned_cols=207 Identities=29% Similarity=0.494 Sum_probs=185.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r~ 460 (1288)
|+|+||+++|+. ++++|+||||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+..+ -+|+
T Consensus 2 I~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 789999999985 36799999999999999999999999999999999999999999999999999876644 5899
Q ss_pred ceEEEcCCCCCC-chhHHHHHhcCCCC------CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 461 KIGLVSQEPVLF-TGSIKDNIAYGKDD------ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 461 ~i~~v~Q~~~l~-~~ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
+||+|+||..|. ..||.||++|+..- .-.+++.++++.+++.+....+| .+||||||||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 999999999877 56999999997432 12356778888888888887887 5999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecC
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 603 (1288)
|||++.+|++||-||||.+|||++...|++.+.++.+ |.||++.||+.+.+.. --|++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 9999999999999999999999999999999998864 7899999999999987 67899999999987543
No 137
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.2e-44 Score=400.84 Aligned_cols=239 Identities=32% Similarity=0.596 Sum_probs=217.1
Q ss_pred CcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHh
Q 000777 380 IRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIR 459 (1288)
Q Consensus 380 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r 459 (1288)
..+.|+++|++++|+.. ++.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+.+...++
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 45789999999999642 35699999999999999999999999999999999999999999999999999888888888
Q ss_pred cceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 460 KKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+.|+||+|+|++|++|++||+..... ...+++..+.+..++.+.++.+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999975432 23456677778888889999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHHH
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 619 (1288)
+|++|||||||++||+++++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+..++.|..++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999988778999999999999988999999999999999999999876566676665
Q ss_pred H
Q 000777 620 R 620 (1288)
Q Consensus 620 ~ 620 (1288)
.
T Consensus 254 ~ 254 (257)
T cd03288 254 R 254 (257)
T ss_pred h
Confidence 3
No 138
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-45 Score=381.35 Aligned_cols=197 Identities=36% Similarity=0.532 Sum_probs=169.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.+++++|+++|+. ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999963 6799999999999999999999999999999999999999999999999887432 3579
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCCCC--H----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDDAT--T----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~~~--~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
+||||++.||+ .||+||+.++.+... . ++..+.++.+++.++ -+..+.+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~-----------~~~~P~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGF-----------EDKYPHQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcch-----------hhcCccccChHHHHHHHHHH
Confidence 99999999995 799999999866421 1 234444445544444 44555799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeC--CEE
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHR--GKI 598 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~--G~i 598 (1288)
||+.+|+||+||||++|||+.|+..+++.+.++.+ ++|+++|||++++.-. +|||++|.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 99999999999999999999999999999988754 5899999999999866 999999999 445
No 139
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=375.54 Aligned_cols=227 Identities=30% Similarity=0.490 Sum_probs=188.2
Q ss_pred cEEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC-HHHHhc
Q 000777 383 DIELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ-LQWIRK 460 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~r~ 460 (1288)
.++++|+++.|+... ..++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.++|.++.... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 489999999997421 125999999999999999999999999999999999999999999999998876543 346778
Q ss_pred ceEEEcCCCC--CC-chhHHHHHhcCCCC----CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 461 KIGLVSQEPV--LF-TGSIKDNIAYGKDD----ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 461 ~i~~v~Q~~~--l~-~~ti~~ni~~~~~~----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
.|-+|||||. |- ..||++-|.-+... ...+++.++++.+++.+ ....+++.+|||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~----------~~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPP----------SFLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCH----------HHHhcCchhcChhHHHHHHH
Confidence 9999999996 32 34777777543221 12344566666665533 12334556999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCc--eEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNR--TTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~--t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
||||.-+|++||||||||+||+.....|++.+.++.+++ |.|+|||+++.+.+ ||||+||++|+++|.++.+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999999999999999999999999999988754 99999999999988 999999999999999999999987
Q ss_pred CCchHHHHH
Q 000777 611 PEGAYSQLI 619 (1288)
Q Consensus 611 ~~~~~~~~~ 619 (1288)
+...|.+..
T Consensus 233 ~~h~ytr~L 241 (252)
T COG1124 233 PSHPYTREL 241 (252)
T ss_pred CccHHHHHH
Confidence 677776643
No 140
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-45 Score=373.39 Aligned_cols=217 Identities=32% Similarity=0.565 Sum_probs=187.5
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC---HHHHh
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ---LQWIR 459 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~r 459 (1288)
.|+++||+..||+ ++.+|+||||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|.++..+. .+.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999983 578999999999999999999999999999999999999999999999999998776 45678
Q ss_pred cceEEEcCCCCCCc-hhHHHHHhcCCCCC-----------CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 460 KKIGLVSQEPVLFT-GSIKDNIAYGKDDA-----------TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
++|||++|++.|.. .||.+|+..|.-.. +.++.. .+.+.++++ |+....-.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~------~Al~aLerv--gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKA------QALDALERV--GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHH------HHHHHHHHc--CcHHHHHHHhccCCcch
Confidence 89999999999885 59999999885432 222222 222334444 55545556778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecCh
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 604 (1288)
+|||+|||||+++|+|+|-|||+|+|||.+.+.+++.|+++.+ +.|+|+.-|+++.+++ ||||+-|++|+|+.+|++
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 9999999999999999999999999999999999999998763 6899999999999976 999999999999999999
Q ss_pred hHHhc
Q 000777 605 SKLVE 609 (1288)
Q Consensus 605 ~~l~~ 609 (1288)
+|+-+
T Consensus 233 ~el~~ 237 (258)
T COG3638 233 SELTD 237 (258)
T ss_pred hhhhH
Confidence 98643
No 141
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=403.98 Aligned_cols=220 Identities=33% Similarity=0.544 Sum_probs=196.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+.+|.+. .+|+|+||+|+.||.++|+||||||||||+++|+||.+|++|+|+|||.|+++++++. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2899999999999999999999999999999999999999999999999999998876 789
Q ss_pred EEEccCCCCch-hhHHHHHhcCCCC-----CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKGG-----DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
++|+|++.||+ .||+|||+|+... +..++++.++++..++.+.+++.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 99999999996 5999999987421 223667888888888887766544 579999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
||+++|++++||||.|+||+.....+...|+++.+ +.|+|.|||+...+.. +|||+||.+|+|.+.|+|.|+.++|.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988653 5799999999988765 99999999999999999999999887
Q ss_pred cHHHH
Q 000777 1273 GFYAS 1277 (1288)
Q Consensus 1273 g~y~~ 1277 (1288)
..|-.
T Consensus 227 n~fVA 231 (338)
T COG3839 227 NLFVA 231 (338)
T ss_pred chhhh
Confidence 76643
No 142
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-44 Score=393.48 Aligned_cols=227 Identities=50% Similarity=0.857 Sum_probs=209.2
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
+.|+++|++++|+. .+++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 35899999999962 2469999999999999999999999999999999999999999999999999988777788889
Q ss_pred eEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 462 IGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 462 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
++|++|++.+|.+|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876655566777778888899999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++..+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999998778899999999999878999999999999999998887653
No 143
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-44 Score=388.81 Aligned_cols=216 Identities=36% Similarity=0.629 Sum_probs=195.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeecc-CCCHHHHhcc
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQ-KLQLKWLRQQ 1120 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~ 1120 (1288)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999854 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred eEEEccCC--CCchhhHHHHHhcCCCC-CCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1121 MGLVSQEP--VLFNDTIRANIAYGKGG-DATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1121 i~~V~Qd~--~Lf~gTIreNl~~g~~~-~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
+|+|+|+| ++|..||.|.++||+.. ..+.+ .+.++++.+++.++. .....+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~-----------~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELL-----------DRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhc-----------cCCccccCCcceeeHHh
Confidence 99999999 89999999999998532 23444 466777788877663 24457899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCC--ceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKN--RTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~--~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|.+|..+|++||||||||+||+...+.+.+.++++.+. +|+|+|||+++.+.. |||++||++|+++.+|+|++++++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999999998644 699999999999987 999999999999999999999986
No 144
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=394.39 Aligned_cols=232 Identities=50% Similarity=0.808 Sum_probs=211.6
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|+. ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000777 464 LVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRI 543 (1288)
Q Consensus 464 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~i 543 (1288)
|++|++++|+.|++||+.++.+..+.+++...++..++.+.+..+|.|+++.++.++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987665566667777888888899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcCCCchHHHH
Q 000777 544 LLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQL 618 (1288)
Q Consensus 544 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 618 (1288)
|||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++.+. ...|...
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~ 232 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEM 232 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHH
Confidence 9999999999999999999999988777899999999999988999999999999999999888764 4445443
No 145
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=384.85 Aligned_cols=219 Identities=32% Similarity=0.503 Sum_probs=186.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH-HHHhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL-QWIRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 461 (1288)
.|+++|+++.|+ ..++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||..+.+.+. ....++
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 378899999996 3568999999999999999999999999999999999999999999999994333222 333468
Q ss_pred eEEEcCCCCCC-chhHHHHHhcCCCC--------CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000777 462 IGLVSQEPVLF-TGSIKDNIAYGKDD--------ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 462 i~~v~Q~~~l~-~~ti~~ni~~~~~~--------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~ 532 (1288)
||+|+|+..|| ..||++||+||.+- ....++.+.++++++...-++ .+.+||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~r-----------yP~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADR-----------YPAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhc-----------CchhcChHHHHHHH
Confidence 99999999988 67999999999631 122445555666655544444 45799999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
|||||..+|+||+||||+++||++-++.+.+.|+++.. +.|+++||||.+++.. ||||++|++|+|...|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 99999999999999999999999999999999988764 6799999999999866 99999999999999999999998
Q ss_pred CCCchH
Q 000777 610 DPEGAY 615 (1288)
Q Consensus 610 ~~~~~~ 615 (1288)
+|+..|
T Consensus 228 ~P~s~f 233 (345)
T COG1118 228 HPASRF 233 (345)
T ss_pred CCCccc
Confidence 876544
No 146
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.8e-44 Score=412.28 Aligned_cols=225 Identities=31% Similarity=0.533 Sum_probs=189.4
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW---IR 459 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~r 459 (1288)
|+++||+++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 247999999999999999999999999999999999999999999999999998876544 57
Q ss_pred cceEEEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 460 KKIGLVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
++|+||||++.+|. .|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+.+|||||||||+||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999985 799999998642 122222111 112233333 45445566678999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCc
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEG 613 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 613 (1288)
|+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|++++++.++..
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~ 234 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKT 234 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCc
Confidence 9999999999999999999999999999999864 6899999999999976 999999999999999999999876554
Q ss_pred hH
Q 000777 614 AY 615 (1288)
Q Consensus 614 ~~ 615 (1288)
.+
T Consensus 235 ~~ 236 (343)
T TIGR02314 235 PL 236 (343)
T ss_pred HH
Confidence 44
No 147
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.9e-44 Score=378.11 Aligned_cols=209 Identities=34% Similarity=0.526 Sum_probs=172.2
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH---H-
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW---I- 458 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~- 458 (1288)
++++||++.|.... ...+|+++||+|++||+++|+||||||||||+++|.|+..|++|.|.++|+|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 247999999999999999999999999999999999999999999999999999887543 3
Q ss_pred hcceEEEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCcccccc-CCCCCCChHHHHHHHHH
Q 000777 459 RKKIGLVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVG-EHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 459 r~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~-~~g~~LSgGqkqri~lA 534 (1288)
|++||||||+..|.+ .|++|||.++.. .....+..++ +.+.++.+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 468999999999885 599999996421 1111111111 11222333 4443333 56789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEe
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIV 599 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 599 (1288)
|||+.+|++++.||||++||+++.+.|++.++++.+ ++|+|+|||+......|||++.|.+|++.
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999999854 67999999999999999999999999954
No 148
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=393.88 Aligned_cols=226 Identities=55% Similarity=0.908 Sum_probs=208.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 236999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000777 464 LVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRI 543 (1288)
Q Consensus 464 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~i 543 (1288)
|++|++.+|..|++||+.++.+.....++...++..++.++++.+|.|+++..+..+.+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987665555666777788888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 544 LLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 544 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+++++.+.
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 9999999999999999999999998778899999999999978999999999999999999988765
No 149
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.3e-43 Score=394.05 Aligned_cols=227 Identities=63% Similarity=1.044 Sum_probs=207.1
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|+...++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+....++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999996433357999999999999999999999999999999999999999999999999988777777778899
Q ss_pred EEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000777 464 LVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRI 543 (1288)
Q Consensus 464 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~i 543 (1288)
|++|++.+|+.|++||+.++.+....++.....+..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655555666667777788889999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 544 LLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 544 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999988777899999999999888999999999999999998888764
No 150
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-43 Score=406.59 Aligned_cols=222 Identities=27% Similarity=0.466 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC-------
Q 000777 1042 EIELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL------- 1112 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i------- 1112 (1288)
.|+++||+|+|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ---------CHHHHhcceEEEccCC--CCchhhHHHHHhcCCC-CCCCHHHHHHHHHHhchhHHHHhhhcccc-ccccCC
Q 000777 1113 ---------QLKWLRQQMGLVSQEP--VLFNDTIRANIAYGKG-GDATEAEIQAASEMANAHKFICSLQQGYD-TMVGER 1179 (1288)
Q Consensus 1113 ---------~~~~lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~ 1179 (1288)
+...+|++|+||+|+| .+|+.|++||+.++.. ...++++..+ . ..+++..+ |++ ...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6999999999988631 1234433321 1 12333333 443 346677
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-hcCEEEEEeCCE
Q 000777 1180 GLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIK-NADMIAVVKNGV 1257 (1288)
Q Consensus 1180 G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ 1257 (1288)
+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|++.. +++|+|+|||+++.+. .||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 88999999999999999999999999999999999999999999998764 5789999999999875 599999999999
Q ss_pred EEEecChhhhhcC
Q 000777 1258 IVEKGKHENLINI 1270 (1288)
Q Consensus 1258 Ive~Gt~~eLl~~ 1270 (1288)
+++.|+|++++..
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999987654
No 151
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-44 Score=387.97 Aligned_cols=215 Identities=37% Similarity=0.636 Sum_probs=191.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCC-CCCHHHHhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLK-EFQLQWIRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~-~~~~~~~r~~ 461 (1288)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++++|+++|++|+|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999754 68999999999999999999999999999999999999999999999999998 4778899999
Q ss_pred eEEEcCCC--CCCchhHHHHHhcCCCCC--CHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 462 IGLVSQEP--VLFTGSIKDNIAYGKDDA--TTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 462 i~~v~Q~~--~l~~~ti~~ni~~~~~~~--~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
+|||+|+| ++|..||.|.++||.++. +.+ ++.++++.+++.++ ......+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~-----------~~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEEL-----------LDRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhh-----------ccCCccccCCcceeeHHh
Confidence 99999999 799999999999997653 232 34445555554443 455667999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCC--ceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVN--RTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~--~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|.+|..+|++||||||||+||+...+.+.+.++++.++ +|+|++||+++.+.. ||++++|++|+++.+|++.++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999999999754 699999999999977 999999999999999999998875
No 152
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.4e-43 Score=389.07 Aligned_cols=220 Identities=42% Similarity=0.721 Sum_probs=202.3
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcc
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
+.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999988887778899
Q ss_pred eEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1121 MGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
++|+||++.+|..|++||+.++.. ..+++++.++++..++.+.+..+|.|++|.+.+...+||||||||++||||++.+
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~ 158 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAP-LADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLND 158 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCC-CCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999987532 3456678889999999999999999999999988999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G 1262 (1288)
|++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 159 PPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999999999987668999999999988789999999999998765
No 153
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.9e-44 Score=350.44 Aligned_cols=212 Identities=32% Similarity=0.515 Sum_probs=190.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|.+++|.|+|...+ =.++++|++||+|||+||||||||||++++.||..|.+|+|+|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56789999996432 368999999999999999999999999999999999999999999999877664 46799
Q ss_pred EEccCCCCch-hhHHHHHhcCCCCC-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKGGD-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
+++||..||. -||++|+.+|..+. ...+.+..++..+|+.+|..++|. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999995 79999999885432 345678999999999999999883 699999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
|+|+-|||+||||.|+||+.-..++...+.+.. ++.|+++|||..+-++. +||++++++|||++.|+-+++++.+.
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 999999999999999999999999999998776 45799999999999866 99999999999999999999998643
No 154
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=392.51 Aligned_cols=473 Identities=16% Similarity=0.167 Sum_probs=366.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCC---CChhHHHHHHHhhHHHHHHHHHHH
Q 000777 764 ALIYLALGAGSFLLSPAQSYFFAVAGNKLIQRIRSMCFEKVIHMEVSWFDEPE---HSSGAIGARLSADAASVRALVGDA 840 (1288)
Q Consensus 764 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~fd~~~---~~~G~l~~r~~~D~~~i~~~~~~~ 840 (1288)
+.+|..++.+..++...+.|+...+..++...|.+.+.++.+...-.|+.... +.+-..-.|+..|+...-......
T Consensus 89 l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l 168 (604)
T COG4178 89 LQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDL 168 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHH
Confidence 34555666666667777888888888888888989999988887754443211 111234579999999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHH---------------HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 841 LARIVQNISTAAAGLIIAF---------------TASWQLALIILVMLPLIGVSGYTQMKFMKGFSADAKMKYEEASQVA 905 (1288)
Q Consensus 841 l~~~~~~~~~~~~~~~~~~---------------~~~~~l~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (1288)
...++.+++.++...+++. .+...+.+++++.+++--++.+...+.+.+..-+..+.+++....+
T Consensus 169 ~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~L 248 (604)
T COG4178 169 SFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSL 248 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHH
Confidence 7888888877777666665 2333444444444554445555666667777777788888888888
Q ss_pred HHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Q 000777 906 NDAVGSIRTVASFCAEEKVMQLYKKKCEAPMKTGIRQGMVSGGGFGASFFLLFAFYAASFYAGARLVEDGKATFSDVFKV 985 (1288)
Q Consensus 906 ~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~ 985 (1288)
...-++.+.|..|+-|+...++.++..+.......+..........++.....+...+-+..++.....|.+++|+++..
T Consensus 249 vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa 328 (604)
T COG4178 249 VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQA 328 (604)
T ss_pred HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHH
Confidence 88999999999999999888888877777666655555444444444444444444555566777788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CCCCCCCCC--cc---ccCCCccEEEEEEEEECCCCCCc
Q 000777 986 FFSLTMTAIGISQSSSFSSDSNKAKSAAASIFAIIDRES--KIDPSDESG--TI---LEDVKGEIELHHVSFKYPSRPDV 1058 (1288)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~--~~~~~~~~~--~~---~~~~~g~I~~~nVsf~Y~~~~~~ 1058 (1288)
..++..+...++.+....+....-.+...|+.++.+.-. +.+...... .. ....+..|+|+||+..-|+. .
T Consensus 329 ~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~--~ 406 (604)
T COG4178 329 VGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG--Q 406 (604)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--C
Confidence 999999999999999999999999999999988764321 101100000 00 01114679999999999854 3
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchhhHHHH
Q 000777 1059 QVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFNDTIRAN 1138 (1288)
Q Consensus 1059 ~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~gTIreN 1138 (1288)
+.|+++||+|+|||.+-|.|+||||||||+++|.|+++--+|+|.+-. -..+-|+||.|++-.||+||-
T Consensus 407 ~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~ 475 (604)
T COG4178 407 TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLREA 475 (604)
T ss_pred eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHHH
Confidence 789999999999999999999999999999999999999999886641 134689999999999999999
Q ss_pred HhcCCCC-CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHH
Q 000777 1139 IAYGKGG-DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAES 1217 (1288)
Q Consensus 1139 l~~g~~~-~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~t 1217 (1288)
|+|-... +.+|+++.++|.+++|.+++.++.+ . ..-..-||+|||||||+||.||++|++++|||||||||+++
T Consensus 476 l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~ 550 (604)
T COG4178 476 LCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-E----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEET 550 (604)
T ss_pred HhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-c----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHH
Confidence 9985433 3899999999999999999999753 2 22456899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEe
Q 000777 1218 ERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVK 1254 (1288)
Q Consensus 1218 e~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~ 1254 (1288)
|..+.+.+++..+++|+|.|+||.......++.+-++
T Consensus 551 e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 551 EDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999999999999987777677766554
No 155
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.7e-44 Score=367.81 Aligned_cols=227 Identities=32% Similarity=0.502 Sum_probs=196.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHh
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLR 1118 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR 1118 (1288)
.|++++|+++|. ++.||+||||+|++||.+||+|+||||||||++++.|+..|++|+|+++|.|+.+++. ..+|
T Consensus 8 ~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 599999999996 3479999999999999999999999999999999999999999999999999988875 4579
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCC--CCCCCHHHHHH----HHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGK--GGDATEAEIQA----ASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~--~~~~sd~ei~~----al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+++|+++|.-.||+ -||+||++|-. ..+.++.++++ .++.+|+...+. ..-++.||||.+.|+
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~----------~~~PsELSGGM~KRv 154 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAA----------DLYPSELSGGMRKRV 154 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhh----------hhCchhhcchHHHHH
Confidence 99999999999996 59999998731 12345555544 455566654421 123568999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|||||+.-+|+||++|||||+|||.+...+-+.|+++.+ +.|+|+|||+++++.. ||||+++.+|+|+..|+++||.
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999887653 6799999999999977 8999999999999999999999
Q ss_pred cCCCcHHHHHHHH
Q 000777 1269 NIPDGFYASLIAL 1281 (1288)
Q Consensus 1269 ~~~~g~y~~L~~~ 1281 (1288)
+..+.+.++.+..
T Consensus 235 ~sd~P~v~qf~~G 247 (263)
T COG1127 235 ASDDPWVRQFFNG 247 (263)
T ss_pred hCCCHHHHHHhcC
Confidence 9867777776643
No 156
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.7e-44 Score=354.97 Aligned_cols=209 Identities=30% Similarity=0.494 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC---HHHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ---LKWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR~ 1119 (1288)
|+|+||+.+|+.. +++|+||||+|++||.+-|+|||||||||++|+|++...|+.|+|+++|.|+..++ ..-||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999854 57999999999999999999999999999999999999999999999999998775 456999
Q ss_pred ceEEEccCCCCc-hhhHHHHHhcCC-----CCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1120 QMGLVSQEPVLF-NDTIRANIAYGK-----GGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf-~gTIreNl~~g~-----~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
+||+|+||..|+ +-|+.||++|.. ++..-.+++.++++.+|+.+-...+| ..|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 999999999776 679999998742 11223456778999999998887777 4699999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhhc-CEEEEEeCCEEEEecCh
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKNA-DMIAVVKNGVIVEKGKH 1264 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~-DrI~vl~~G~Ive~Gt~ 1264 (1288)
|||++.+|++||-||||-+||+++...|++.+.+.- .|.||++.||+.+.+..+ -|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999999874 678999999999999874 67999999999976654
No 157
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=378.83 Aligned_cols=210 Identities=29% Similarity=0.488 Sum_probs=182.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++|+|.+ . ++|+||||++++|++++|+||||||||||+|+|+|+++|.+|+|.+.|.+.+.... +.+|
T Consensus 4 ~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 5899999999963 2 59999999999999999999999999999999999999999999999988765332 4689
Q ss_pred EEEcCCC---CCCchhHHHHHhcCCCCC----------CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000777 463 GLVSQEP---VLFTGSIKDNIAYGKDDA----------TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 463 ~~v~Q~~---~l~~~ti~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 529 (1288)
|||||.. |-|+.||+|-+.+|.... +.+++.++++.+++.++. .....+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----------~r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----------DRQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----------CCcccccCcHHHH
Confidence 9999965 568999999999984321 136677777777766543 4456789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||.|||||+++|++|+|||||+++|+.++..+.+.|+++++ ++||++||||++.+.. +|+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 99999999999999999999999999999999999999976 7999999999999876 9999999 4578899999998
Q ss_pred hcC
Q 000777 608 VED 610 (1288)
Q Consensus 608 ~~~ 610 (1288)
.+.
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 764
No 158
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.3e-43 Score=386.47 Aligned_cols=220 Identities=35% Similarity=0.653 Sum_probs=203.8
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
|.++++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 358999999999632 3579999999999999999999999999999999999999999999999999988888888899
Q ss_pred eEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 462 IGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 462 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
++|++|++.++++|++||+.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999986543 4566778888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecC
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 603 (1288)
+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999877789999999999998899999999999998875
No 159
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-44 Score=366.25 Aligned_cols=223 Identities=37% Similarity=0.552 Sum_probs=193.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC---HHHHh
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ---LKWLR 1118 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR 1118 (1288)
.|+++||+.+||+ ++++|+||||+|++||.|||+|+||||||||++.|.|+.+|++|+|+++|.++...+ +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999998876 77889
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCCC-------------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKGG-------------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~~-------------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
++||+|+|.+-|.+ -|+.+|+..|... ..+.....+||+.+|+.++.. .+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccCC
Confidence 99999999998874 6999999755321 223345667888888877642 3456899
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEe
Q 000777 1185 GGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEK 1261 (1288)
Q Consensus 1185 gGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~ 1261 (1288)
|||+||++|||||..+|+|+|-|||+|+|||.+.+.|++.|++.. .+.|+|+.-|.++..+. ||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999875 56899999999999976 999999999999999
Q ss_pred cChhhhhcCCCcHHHHHHH
Q 000777 1262 GKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1262 Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
|++.||-+ ..+.+.+.
T Consensus 230 g~~~el~~---~~~~~iYg 245 (258)
T COG3638 230 GPASELTD---EALDEIYG 245 (258)
T ss_pred CChhhhhH---HHHHHHhc
Confidence 99999643 34444443
No 160
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.6e-43 Score=390.44 Aligned_cols=213 Identities=37% Similarity=0.577 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccC-----CCCCceEEECCeeccCCC--HH
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFY-----DPDAGHITLDGVEIQKLQ--LK 1115 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~-----~p~~G~I~idG~di~~i~--~~ 1115 (1288)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 66
Q ss_pred HHhcceEEEccCCCCchhhHHHHHhcCCCC-CC-----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1116 WLRQQMGLVSQEPVLFNDTIRANIAYGKGG-DA-----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~~-----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
.+|++++|+||++.+|..|++||+.++... .. .++++.++++..++.+.....++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999989999999864210 11 23456677777777655433211 4689999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|++|||||+++|++|||||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999998656899999999999865 999999999999999998764
No 161
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-43 Score=391.00 Aligned_cols=219 Identities=35% Similarity=0.521 Sum_probs=187.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1119 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 369999999999999999999999999999999999999999999999999987764 56889
Q ss_pred ceEEEccCCCCchh-hHHHHHhcCCC--CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1120 QMGLVSQEPVLFND-TIRANIAYGKG--GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~g-TIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
+++||||++.+|.. |++||+.++.. ...+. +++.++++..++.++. .....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 99999999999985 99999986421 11232 2345556666554432 3344679999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999986
Q ss_pred CCCcHHH
Q 000777 1270 IPDGFYA 1276 (1288)
Q Consensus 1270 ~~~g~y~ 1276 (1288)
. ...|.
T Consensus 227 ~-~~~~~ 232 (235)
T cd03261 227 S-DDPLV 232 (235)
T ss_pred C-CChhh
Confidence 4 44443
No 162
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=3.4e-43 Score=387.60 Aligned_cols=219 Identities=52% Similarity=0.838 Sum_probs=199.5
Q ss_pred CCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHh
Q 000777 1039 VKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLR 1118 (1288)
Q Consensus 1039 ~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 1118 (1288)
..+.|+++|++++|+++.+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45679999999999753234699999999999999999999999999999999999999999999999999888878888
Q ss_pred cceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1119 QQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
++++|+||++.+|++|++||+.++.. ....+++++..+..++.+++..+|.|+++.++....+||||||||++|||||+
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQ-SCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccC-CCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999987632 33455666666777888999999999999999999999999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVI 1258 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1258 (1288)
++|++|||||||++||+++...+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999998777899999999999988999999999975
No 163
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-44 Score=400.04 Aligned_cols=222 Identities=35% Similarity=0.540 Sum_probs=198.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+.+|. +..+++|+||+|++||.++|+|||||||||++++|+||..|++|+|.+||.||..++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 599999999996 34799999999999999999999999999999999999999999999999999998875 5889
Q ss_pred EEEccCCCCc-hhhHHHHHhcCCC--CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEPVLF-NDTIRANIAYGKG--GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~~Lf-~gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
++|+|+..|| +.||+||++||.. .... ++.+.++++.+++.++-.+. ..+|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----------p~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRK-----------PHQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhC-----------hhhhChHHHHHHHHH
Confidence 9999999999 5899999999853 1122 23788899999998875554 457999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhh-hhcCEEEEEeCCEEEEecChhhhhcCC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTI-KNADMIAVVKNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~Gt~~eLl~~~ 1271 (1288)
|||..+|++||||||-||||.+-...++.-|++.. .+.|.|+|||+-+.. ..+|||+||.+|+|...|+|+|+..+|
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999999988765 367999999999876 559999999999999999999999998
Q ss_pred CcHHHHHH
Q 000777 1272 DGFYASLI 1279 (1288)
Q Consensus 1272 ~g~y~~L~ 1279 (1288)
...|-.=+
T Consensus 229 ~~~fVA~F 236 (352)
T COG3842 229 ATRFVADF 236 (352)
T ss_pred chHHHHHH
Confidence 77775543
No 164
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=371.84 Aligned_cols=198 Identities=36% Similarity=0.519 Sum_probs=174.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.+++++|++.|.+ ..||+|+||+|++||.|+||||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999974 4799999999999999999999999999999999999999999999999988543 4579
Q ss_pred EEEccCCCCch-hhHHHHHhcCCCCC-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKGGD-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||+|++.||. -|++||+.++.... ...+.+.++++.+|+.+|-.+. +.+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~-----------P~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKY-----------PHQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcC-----------ccccChHHHHHHHHHH
Confidence 99999999997 79999999874311 1344678889999998886554 4689999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeC--CEE
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKN--GVI 1258 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~--G~I 1258 (1288)
||+.+|+||+||||.+|||+.|...+|+.+.+..+ ++||++|||+.+..- -+|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 99999999999999999999999999999988764 589999999998864 5999999999 555
No 165
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=9.5e-43 Score=382.53 Aligned_cols=220 Identities=43% Similarity=0.744 Sum_probs=200.3
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
++++++|++++|+.. .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+....++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999632 2569999999999999999999999999999999999999999999999999887777777889
Q ss_pred eEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 462 IGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 462 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
++|++|++.+|..|++||+.++.+....+++.+.++..++.+.++.+|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999899999998875544556677788888998899999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988679999999999998754
No 166
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-43 Score=390.01 Aligned_cols=220 Identities=33% Similarity=0.522 Sum_probs=193.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC---CCCceEEECCeeccCCCHHHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD---PDAGHITLDGVEIQKLQLKWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR~ 1119 (1288)
|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.++.+.+...+|+
T Consensus 3 ~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 3 AKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred eeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 789999999973 369999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ceEEEccCCCCchhhHHHHHhcCCC--C-----CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1120 QMGLVSQEPVLFNDTIRANIAYGKG--G-----DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~gTIreNl~~g~~--~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
+++|+||++.+|..|++||+.++.. . ...++++.++++..++.+++.. ...+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHHH
Confidence 9999999999999999999986521 0 1123356777888887665543 234567789999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCC
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1271 (1288)
|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999998778999999999998864 9999999999999999999998754
Q ss_pred C
Q 000777 1272 D 1272 (1288)
Q Consensus 1272 ~ 1272 (1288)
.
T Consensus 233 ~ 233 (246)
T PRK14269 233 K 233 (246)
T ss_pred C
Confidence 3
No 167
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-43 Score=375.62 Aligned_cols=218 Identities=28% Similarity=0.511 Sum_probs=189.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++|++|+|.+. +||+||||+|++|+.+||+||||||||||+|+++|+.+|++|+|.++|.++++... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 49999999999632 59999999999999999999999999999999999999999999999998876543 5789
Q ss_pred EEEccCC---CCchhhHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1122 GLVSQEP---VLFNDTIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1122 ~~V~Qd~---~Lf~gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
|||||.. .-|.-||+|=+.+|... ..+.+++.+||+.+++.++. |.++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-------~r~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-------DRQIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-------CCccc----ccCcHHHH
Confidence 9999955 46889999999876321 12358899999999999885 34455 59999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK-NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. +|+|+.|. ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999874 8999999999999965 99999886 668899999999
Q ss_pred hcCCCcHHHHHH
Q 000777 1268 INIPDGFYASLI 1279 (1288)
Q Consensus 1268 l~~~~g~y~~L~ 1279 (1288)
+.. ..+.+.+
T Consensus 226 ~~~--~~l~~~~ 235 (254)
T COG1121 226 LTE--ENLEKAF 235 (254)
T ss_pred cCH--HHHHHHh
Confidence 874 3344443
No 168
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.3e-43 Score=368.94 Aligned_cols=208 Identities=36% Similarity=0.525 Sum_probs=174.2
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHH-
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWL- 1117 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~l- 1117 (1288)
++++||+..|.... ..++|+|+||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++- ..+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 2469999999999999999999999999999999999999999999999999998873 434
Q ss_pred hcceEEEccCCCCch-hhHHHHHhc----CCCCC-CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1118 RQQMGLVSQEPVLFN-DTIRANIAY----GKGGD-ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1118 R~~i~~V~Qd~~Lf~-gTIreNl~~----g~~~~-~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
|++||+|+|+..|++ -|++||+.+ ..... ...+.+.+.++..|+.+... .....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 557999999998884 699999984 21111 12334555555556554322 144678999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVE 1260 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive 1260 (1288)
||||||+.+|+|++.||||.+||.+|.+.|.+.+++..+ ++|+|+|||+......|||++.|.+|++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999853 689999999999999999999999999543
No 169
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-43 Score=396.99 Aligned_cols=218 Identities=30% Similarity=0.525 Sum_probs=191.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999742224699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--CCchhhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEP--VLFNDTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~--~Lf~gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
+||+|+| .++..|++|||.++... ..+ ++++.++++.+++.++.. ....+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 46678999999876311 123 245677777777765543 33468999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7899999999999988999999999999999999998865
No 170
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-42 Score=386.53 Aligned_cols=225 Identities=33% Similarity=0.590 Sum_probs=193.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCCchhhHHHHHhcCCC-CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1122 GLVSQEPVLFNDTIRANIAYGKG-GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~gTIreNl~~g~~-~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
+|+||++.+|+.|++||+.++.. ....++++.+.++..++.+ .........||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999987521 1122345566666655531 112345678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcHHHH
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGFYAS 1277 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1277 (1288)
|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++..+...|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 999999999999999999999999998753 7899999999999875 9999999999999999999998765555655
Q ss_pred HH
Q 000777 1278 LI 1279 (1288)
Q Consensus 1278 L~ 1279 (1288)
.+
T Consensus 230 ~~ 231 (241)
T PRK14250 230 LF 231 (241)
T ss_pred HH
Confidence 44
No 171
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-43 Score=405.58 Aligned_cols=220 Identities=31% Similarity=0.501 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|.+ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++.+.+. .+++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999963 469999999999999999999999999999999999999999999999999987664 46889
Q ss_pred EEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||+|++.+|. .|++||+.|+.. ...+ ++++.++++..++.++.. .....||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~-----------r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFED-----------RYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHH
Confidence 99999999996 599999998631 1122 346677777777765533 335689999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
||+++|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|+||++|+|++.|+++++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998764 7899999999999855 99999999999999999999998877
Q ss_pred cHHHH
Q 000777 1273 GFYAS 1277 (1288)
Q Consensus 1273 g~y~~ 1277 (1288)
..|..
T Consensus 230 ~~~~a 234 (351)
T PRK11432 230 SRFMA 234 (351)
T ss_pred chHHH
Confidence 65543
No 172
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-43 Score=399.84 Aligned_cols=222 Identities=26% Similarity=0.476 Sum_probs=189.7
Q ss_pred ccEEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCC------
Q 000777 382 GDIELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEF------ 453 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~------ 453 (1288)
..|+++|++|+|+... +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999996321 24699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccC
Q 000777 454 ----------QLQWIRKKIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGID-TLVGE 518 (1288)
Q Consensus 454 ----------~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~ 518 (1288)
....+|++|+||+|+| .+|+.||+|||.++... .+.++... .+.+.++.+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcC
Confidence 3456788999999998 68999999999987422 23322211 123455555 665 56788
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-hcCEEEEEeCC
Q 000777 519 HGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVR-NADMIAVIHRG 596 (1288)
Q Consensus 519 ~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~~l~~G 596 (1288)
.+.+||||||||++|||||+++|++|||||||++||+.+++.+.+.|+++. +++|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 899999999999999999999999999999999999999999999998874 4789999999999885 59999999999
Q ss_pred EEeEecChhHHhcC
Q 000777 597 KIVEKGTHSKLVED 610 (1288)
Q Consensus 597 ~i~~~g~~~~l~~~ 610 (1288)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998765
No 173
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-43 Score=404.66 Aligned_cols=224 Identities=33% Similarity=0.525 Sum_probs=189.4
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH---Hh
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW---LR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1118 (1288)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997211 347999999999999999999999999999999999999999999999999998877544 57
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCC-CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKG-GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
++|+||||++.+|. .|++||+.++.. ...+. +++.++++..++.++ ......+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHH
Confidence 89999999999886 799999986421 11222 344555555555443 33445689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999987
Q ss_pred CCCcHHHH
Q 000777 1270 IPDGFYAS 1277 (1288)
Q Consensus 1270 ~~~g~y~~ 1277 (1288)
++...+.+
T Consensus 231 ~~~~~~~~ 238 (343)
T PRK11153 231 HPKHPLTR 238 (343)
T ss_pred CCCcHHHH
Confidence 65444433
No 174
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.8e-42 Score=376.24 Aligned_cols=204 Identities=36% Similarity=0.646 Sum_probs=183.7
Q ss_pred CccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhc
Q 000777 1040 KGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQ 1119 (1288)
Q Consensus 1040 ~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~ 1119 (1288)
.+.++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 3569999999999742 236999999999999999999999999999999999999999999999999998888888999
Q ss_pred ceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcC
Q 000777 1120 QMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVK 1199 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr 1199 (1288)
+|+||||+|.+|++|++||+.+.. ..+++++.++++ ++.....|||||+||++||||+++
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~--~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFD--EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccC--CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 999999999999999999997642 345555554443 245678899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecCh
Q 000777 1200 DPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKH 1264 (1288)
Q Consensus 1200 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~ 1264 (1288)
+|++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999998778999999999999988999999999999998874
No 175
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-43 Score=405.02 Aligned_cols=221 Identities=28% Similarity=0.469 Sum_probs=192.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ +.++|+|+||+|++||.+||+||||||||||+++|+|+.+|++|+|.+||.++.+++.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 24699999999999999999999999999999999999999999999999999887754 4789
Q ss_pred EEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||||++.+|. .|++||+.|+.. ...+ ++++.++++..++.++..+. ..+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRK-----------PRELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCC-----------hhhCCHHHHHHHHHHH
Confidence 99999999995 699999998632 1122 24566778888877665443 3589999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++++++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998764 689999999999885 499999999999999999999998876
Q ss_pred cHHHH
Q 000777 1273 GFYAS 1277 (1288)
Q Consensus 1273 g~y~~ 1277 (1288)
..|..
T Consensus 228 ~~~~~ 232 (356)
T PRK11650 228 STFVA 232 (356)
T ss_pred cHHHH
Confidence 55543
No 176
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-42 Score=402.74 Aligned_cols=218 Identities=29% Similarity=0.517 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|++ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++.+.++. ++.|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 35699999999999999999999999999999999999999999999999999877654 4689
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD--ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
+||||++.+|. .||+|||.|+... .+. +++.++++.. |++......+.+|||||||||+|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARIL-----------ELEPLLDRKPRELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHc-----------CChhHhhCChhhCCHHHHHHHHHHH
Confidence 99999999995 6999999987532 222 2233344444 4444455566799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
||+++|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998764 6899999999998865 99999999999999999999988765
Q ss_pred chH
Q 000777 613 GAY 615 (1288)
Q Consensus 613 ~~~ 615 (1288)
..|
T Consensus 228 ~~~ 230 (356)
T PRK11650 228 STF 230 (356)
T ss_pred cHH
Confidence 444
No 177
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.6e-42 Score=382.19 Aligned_cols=220 Identities=50% Similarity=0.832 Sum_probs=197.3
Q ss_pred CCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH
Q 000777 379 DIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI 458 (1288)
Q Consensus 379 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 458 (1288)
...+.++++|++++|+++.+.++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+....
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 34577999999999974323469999999999999999999999999999999999999999999999999887777777
Q ss_pred hcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 459 RKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 459 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
++.++|++|++.+|..|++||+.++.......++....+...+.++++.+|.|+++.+++.+.+||||||||++|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 88999999999999999999999876544444444555556778899999989999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKI 598 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 598 (1288)
++|++|||||||++||+.+.+.+.+.++++.+++|+|++||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999998777899999999999977999999999974
No 178
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-42 Score=389.15 Aligned_cols=226 Identities=29% Similarity=0.462 Sum_probs=192.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1114 (1288)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|++||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3699999999999999999999999999999999999997 48999999999853 345
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCCC-C-C----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKGG-D-A----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~-~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|+.|++||+.++... . . .++++.++++.+++.+.+ ++.+++ .+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 6788999999999999999999999875210 1 1 234566777777765433 233444 5678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999999
Q ss_pred hcCCCcHHHH
Q 000777 1268 INIPDGFYAS 1277 (1288)
Q Consensus 1268 l~~~~g~y~~ 1277 (1288)
.+++...|.+
T Consensus 237 ~~~~~~~~~~ 246 (254)
T PRK14273 237 FFNPKNTKTE 246 (254)
T ss_pred HhCCCChHHH
Confidence 8765554443
No 179
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=394.54 Aligned_cols=219 Identities=32% Similarity=0.567 Sum_probs=187.0
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC--HHHHh
Q 000777 1043 IELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ--LKWLR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~lR 1118 (1288)
|+++||+++|+... .+++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999997743 45788
Q ss_pred cceEEEccCC--CCchhhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1119 QQMGLVSQEP--VLFNDTIRANIAYGKG-GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1119 ~~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
++|+||||+| .+|+.|++||+.++.. ...+.+ ++.++++.+++. +++........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5789999999987521 123333 355566666553 01234455678999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999985 59999999999999999999987
Q ss_pred cC
Q 000777 1269 NI 1270 (1288)
Q Consensus 1269 ~~ 1270 (1288)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 53
No 180
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4.2e-39 Score=380.37 Aligned_cols=473 Identities=16% Similarity=0.145 Sum_probs=347.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhccCChhh------HHHHHHhhHHHHH
Q 000777 102 VSKVAVKFVYLGIGSGIASFLQVTCWMITGERQATRIRGLYLKTILRQDVAFFDNETNTGE------VVGRMSGDTVLIQ 175 (1288)
Q Consensus 102 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~~G~------l~sr~~~D~~~i~ 175 (1288)
++..+.++..++.+..++...+.|+......+--.-|-+.++++.+...-.|+. . ..|. .=.|+..|+..+-
T Consensus 85 f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l-~-~~~~~~~~dNpDQRi~eDi~~~t 162 (604)
T COG4178 85 FWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRL-A-QAGGIGLIDNPDQRIQEDIRNFT 162 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-H-hcccccCCCChHHhHHHHHHHHH
Confidence 444455566666666666666777665555555555556677777776644433 2 3442 3379999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000777 176 DAMGEKVGKFLQLMATFLGGFLIAFIK---------------GWLLTLVMLSSIPLLAMSGGVMAIMISKMSSRGQGAYA 240 (1288)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~i~~~~~---------------~~~l~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1288)
+...+....++.++.+++.-.+++.-. ...+..++++.+++.-++..++++.+.+..-+.++..+
T Consensus 163 ~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA 242 (604)
T COG4178 163 ETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEA 242 (604)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHH
Confidence 887777777777666655544443311 11222333444444455566778888887777777777
Q ss_pred HHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCH
Q 000777 241 KAASVVEQTIGSIRTVASFTGEKQAMSNYKKFLVTAYKSGVQEGLAAGIGLGMVMLIVFCSYALSVWYGGKLILEEGYNG 320 (1288)
Q Consensus 241 ~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 320 (1288)
..-..+...-.+...|-.|+.|+.+.++..+..........+......-..........++.++-+..++.....|.++.
T Consensus 243 ~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~ 322 (604)
T COG4178 243 DFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITF 322 (604)
T ss_pred HHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChH
Confidence 77788888888999999999999988877666555544333332222222222222333333333444556677899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CCccCCCCCcc--cCCCcccEEEEeEEEEC
Q 000777 321 GQVVNVMVAVLTGSMSLGEASPCLSAFGAGQAAAFKMFETINRKP-----EIDAYDTKGKI--LDDIRGDIELRDVYFSY 393 (1288)
Q Consensus 321 g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~-----~~~~~~~~~~~--~~~~~~~i~~~~v~~~y 393 (1288)
|.+.....++......++.+...+..+..-++...|+.++.+... ...+....... ....+..|+++|++..-
T Consensus 323 G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~ 402 (604)
T COG4178 323 GGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRT 402 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEEC
Confidence 999998888888888999999999999999999999988764321 11110100000 01114679999999998
Q ss_pred CCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCc
Q 000777 394 PARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFT 473 (1288)
Q Consensus 394 ~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~ 473 (1288)
|. +...+++.+|++++||.+.|.||||||||||+++|+|++|--+|+|.... ...+-|+||.|++-.
T Consensus 403 p~--~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~ 469 (604)
T COG4178 403 PD--GQTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQ 469 (604)
T ss_pred CC--CCeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCC
Confidence 74 35789999999999999999999999999999999999999999997752 135899999999999
Q ss_pred hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 000777 474 GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATS 551 (1288)
Q Consensus 474 ~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts 551 (1288)
||.||-|+++... .+++++.+++.++++.++++++.+ ...-...||+|||||+|+||.++++|++++|||+||
T Consensus 470 GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-----~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATs 544 (604)
T COG4178 470 GTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-----EDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATS 544 (604)
T ss_pred ccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-----cCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchh
Confidence 9999999998654 789999999999999999998853 223456899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEe
Q 000777 552 ALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIH 594 (1288)
Q Consensus 552 ~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 594 (1288)
|||++++..+.+.+++.+.+.|+|-|+||.......++.+-+.
T Consensus 545 ALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 545 ALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred ccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999999889999999999998877766655554
No 181
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-42 Score=387.59 Aligned_cols=223 Identities=32% Similarity=0.505 Sum_probs=191.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CceEEECCeeccCC--CHH
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD-----AGHITLDGVEIQKL--QLK 1115 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~~~ 1115 (1288)
|+++||+++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|++||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcceEEEccCCCCchhhHHHHHhcCCC-CC-CC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1116 WLRQQMGLVSQEPVLFNDTIRANIAYGKG-GD-AT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~-~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
.+|++++|+||++.+|..|++||+.++.. .. .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 11 11 245667777777764432 1234456789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999998865 9999999999999999999998
Q ss_pred cCCCcHH
Q 000777 1269 NIPDGFY 1275 (1288)
Q Consensus 1269 ~~~~g~y 1275 (1288)
..+...+
T Consensus 232 ~~~~~~~ 238 (247)
T TIGR00972 232 TNPKEKR 238 (247)
T ss_pred hCCCChH
Confidence 7644544
No 182
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-42 Score=382.90 Aligned_cols=217 Identities=35% Similarity=0.566 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH---HHHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL---QWIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r~ 460 (1288)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 47899999996 2469999999999999999999999999999999999999999999999999987654 45778
Q ss_pred ceEEEcCCCCCCch-hHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 461 KIGLVSQEPVLFTG-SIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
.|+||+|++.+|.. |++||+.++.. ..+.++..+. +.+.++.+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999875 99999987632 1222222111 12234444 55555566778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999998754 6899999999999876 999999999999999999988754
No 183
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-42 Score=388.09 Aligned_cols=222 Identities=32% Similarity=0.510 Sum_probs=191.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1114 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 369999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CC-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GD-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|++||+.++.. .. ..++++.++++.+++.+++.. ..+....+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986421 01 123456777777777654432 23456778999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|+|++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999999999
Q ss_pred hcCCCc
Q 000777 1268 INIPDG 1273 (1288)
Q Consensus 1268 l~~~~g 1273 (1288)
.+.+..
T Consensus 236 ~~~~~~ 241 (253)
T PRK14242 236 FTRPRE 241 (253)
T ss_pred HcCCCc
Confidence 876443
No 184
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.1e-43 Score=402.68 Aligned_cols=209 Identities=34% Similarity=0.488 Sum_probs=182.8
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHH----hcceEEEccCCCCch-
Q 000777 1058 VQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWL----RQQMGLVSQEPVLFN- 1132 (1288)
Q Consensus 1058 ~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~V~Qd~~Lf~- 1132 (1288)
+++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|++||.|+...+...+ |++++||||++.+|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999988887 789999999999997
Q ss_pred hhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEe
Q 000777 1133 DTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLD 1207 (1288)
Q Consensus 1133 gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLD 1207 (1288)
.|++||+.++... ..+ .+++.++++.+++.++. +..+.+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~-----------~~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYE-----------HRYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhh-----------hCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 5999999875210 122 34566777777776554 3445689999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhcCCCcHHHH
Q 000777 1208 EATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLINIPDGFYAS 1277 (1288)
Q Consensus 1208 EaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1277 (1288)
||||+||+.+...+++.+.++. .++|+|+|||+++.+. .||+|++|++|++++.|+++++++++...|.+
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 227 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYVE 227 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHHH
Confidence 9999999999999999998874 3789999999999875 59999999999999999999999875544443
No 185
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.7e-42 Score=401.92 Aligned_cols=219 Identities=30% Similarity=0.480 Sum_probs=190.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 3689999999999999999999999999999999999999999999999999877653 6789
Q ss_pred EEEccCCCCch-hhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||+|++.+|. .|++||+.|+... ..+ ++++.++++..++.++ ......+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGS-----------ERKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCch-----------hhCChhhCCHHHHHHHHHHH
Confidence 99999999995 7999999986321 122 3345666666665544 33456789999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++++++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~ 227 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPA 227 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 6899999999998855 99999999999999999999998876
Q ss_pred cHHH
Q 000777 1273 GFYA 1276 (1288)
Q Consensus 1273 g~y~ 1276 (1288)
..|.
T Consensus 228 ~~~~ 231 (353)
T TIGR03265 228 TPFV 231 (353)
T ss_pred CHHH
Confidence 6553
No 186
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-42 Score=390.64 Aligned_cols=214 Identities=31% Similarity=0.551 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 3899999999963 23699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--CCchhhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEP--VLFNDTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~--~Lf~gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
+||||+| .+|..|++||+.++... ..+ ++++.++++.+++.++..+. ...||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKP-----------PYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999998 68889999999875211 122 34567777777776554333 347999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhh
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||||++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999875 4789999999999985 59999999999999999987653
No 187
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-42 Score=399.95 Aligned_cols=217 Identities=30% Similarity=0.544 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|+ +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++|
T Consensus 6 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 589999999996 34699999999999999999999999999999999999999999999999999876643 5789
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD--ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
+||+|++.+|. .||+|||.|+... .+. +++.++++.. |+.......+.+|||||||||||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~-----------gl~~~~~r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELV-----------DLAGFEDRYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHHHH
Confidence 99999999995 5999999997431 222 2233333333 4444455667899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
||+.+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998864 6899999999999865 99999999999999999999988766
Q ss_pred chH
Q 000777 613 GAY 615 (1288)
Q Consensus 613 ~~~ 615 (1288)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 544
No 188
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-42 Score=392.63 Aligned_cols=221 Identities=32% Similarity=0.590 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC----CHHH
Q 000777 1043 IELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL----QLKW 1116 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1116 (1288)
|+++||+++|++.. .+++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 13699999999999999999999999999999999999999999999999999653 3467
Q ss_pred HhcceEEEccCC--CCchhhHHHHHhcCCCC-CCCHHHHHHHHHHhchhHHHHhhhccccc-cccCCCCCCChhHHHHHH
Q 000777 1117 LRQQMGLVSQEP--VLFNDTIRANIAYGKGG-DATEAEIQAASEMANAHKFICSLQQGYDT-MVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1117 lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~~-~~sd~ei~~al~~a~l~~~i~~lp~Gldt-~vge~G~~LSgGQrQrla 1192 (1288)
+|++|+||||+| .+|..|++||+.++... ..+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 68889999999876311 2233333221 11222222 4543 344667899999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||||++|++|+|++.|+++++++
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 3789999999999985 599999999999999999999887
Q ss_pred C
Q 000777 1270 I 1270 (1288)
Q Consensus 1270 ~ 1270 (1288)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 5
No 189
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-42 Score=386.36 Aligned_cols=224 Identities=31% Similarity=0.526 Sum_probs=192.6
Q ss_pred CccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--C
Q 000777 1040 KGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--L 1112 (1288)
Q Consensus 1040 ~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i 1112 (1288)
.+.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 356999999999963 369999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHHhcceEEEccCCCCchhhHHHHHhcCCC--CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1113 QLKWLRQQMGLVSQEPVLFNDTIRANIAYGKG--GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1113 ~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
+...+|++++|+||++.+|..|++||+.++.. ...+ +++++++++.+++.+.+. ...++...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56778999999999999999999999986421 1122 245677777777654332 2345667789999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred hhhcCCCc
Q 000777 1266 NLINIPDG 1273 (1288)
Q Consensus 1266 eLl~~~~g 1273 (1288)
++...+..
T Consensus 241 ~~~~~~~~ 248 (260)
T PRK10744 241 TIFTKPAK 248 (260)
T ss_pred HHHhCCCc
Confidence 99875333
No 190
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.2e-42 Score=400.95 Aligned_cols=221 Identities=30% Similarity=0.497 Sum_probs=190.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 4689999999999999999999999999999999999999999999999999876654 5689
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+||||++.+|. .||+|||.|+... .+..+.. ..+.+.++.+ |++......+.+||||||||++|||||++
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999995 6999999987432 1222211 1233445555 66666777888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchH
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAY 615 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 615 (1288)
+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++...|
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 9999999999999999999999999998764 6899999999999865 99999999999999999999998765444
No 191
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-42 Score=393.45 Aligned_cols=218 Identities=27% Similarity=0.512 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccC----CCHHH
Q 000777 1043 IELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQK----LQLKW 1116 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 1116 (1288)
|+++||+|+|+... .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CCchhhHHHHHhcCCCC-CCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1117 LRQQMGLVSQEP--VLFNDTIRANIAYGKGG-DATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1117 lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~~-~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
+|++++||+|+| .+|..|+.||+.++... ..+.+ ++.++++.+++.+ ........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----------~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLAD----------EFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhccCCcccCCHHHHH
Confidence 899999999998 79999999999876311 12333 3445555555531 1123556789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|++|||||+.+|+||||||||++||+.+...+.+.|+++. +++|+|+|||+++.+. .||||++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998875 4789999999999885 5999999999999999999998
Q ss_pred hcC
Q 000777 1268 INI 1270 (1288)
Q Consensus 1268 l~~ 1270 (1288)
...
T Consensus 232 ~~~ 234 (288)
T PRK13643 232 FQE 234 (288)
T ss_pred HcC
Confidence 764
No 192
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-42 Score=388.04 Aligned_cols=224 Identities=34% Similarity=0.504 Sum_probs=192.8
Q ss_pred CccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccC--C
Q 000777 1040 KGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQK--L 1112 (1288)
Q Consensus 1040 ~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i 1112 (1288)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 3699999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcceEEEccCCCCchhhHHHHHhcCCC-CC------CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCCh
Q 000777 1113 QLKWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GD------ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1113 ~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
+...+|++++|+||+|.+|..|++||+.++.. .. ..++++.++++..++.+++. ...+..+..|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 45678999999999999998999999986421 01 11345677777777765432 223456778999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecCh
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKH 1264 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~ 1264 (1288)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999965 999999999999999999
Q ss_pred hhhhcCCCc
Q 000777 1265 ENLINIPDG 1273 (1288)
Q Consensus 1265 ~eLl~~~~g 1273 (1288)
++++..+..
T Consensus 247 ~~~~~~~~~ 255 (267)
T PRK14235 247 EKMFTNPDD 255 (267)
T ss_pred HHHHhCCCC
Confidence 999865443
No 193
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-42 Score=383.11 Aligned_cols=214 Identities=34% Similarity=0.522 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 369999999999999999999999999999999999999999999999999876543 367899
Q ss_pred EEccCCCCch-hhHHHHHhcCCCC-CC----C----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKGG-DA----T----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~~-~~----s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
||||+|.+|. .|++||+.++... .. + ++++.++++..++.++ ......+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHHH
Confidence 9999999885 6999999875210 11 1 2234455555555433 33445689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 99999999999999999999986
Q ss_pred CCC
Q 000777 1270 IPD 1272 (1288)
Q Consensus 1270 ~~~ 1272 (1288)
.+.
T Consensus 227 ~~~ 229 (239)
T cd03296 227 HPA 229 (239)
T ss_pred CCC
Confidence 533
No 194
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.2e-42 Score=381.35 Aligned_cols=210 Identities=38% Similarity=0.615 Sum_probs=178.6
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC-----CCCCcEEEECCeeCCCCC--HH
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFY-----DPQAGEVLIDGINLKEFQ--LQ 456 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~-----~~~~G~i~~~g~~~~~~~--~~ 456 (1288)
|+++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 478999999963 46999999999999999999999999999999999999 999999999999987766 55
Q ss_pred HHhcceEEEcCCCCCCchhHHHHHhcCCCCC---C----HHHHHHHHHHcCHHHHHHhCCCCccccccCC--CCCCChHH
Q 000777 457 WIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA---T----TEEIRVATELANAAKFIDKLPQGIDTLVGEH--GTQLSGGQ 527 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~--g~~LSgGq 527 (1288)
.++++++|++|++.+|..|++||+.++.... . ++++.+++ +.+ |++...... +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l---------~~~--~l~~~~~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEAL---------RKA--ALWDEVKDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHH---------HHc--CCChHHhccCCcccCCHHH
Confidence 6778999999999999889999998753211 1 11222333 333 343333333 57999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhH
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999999999999998656899999999999875 99999999999999998765
Q ss_pred H
Q 000777 607 L 607 (1288)
Q Consensus 607 l 607 (1288)
+
T Consensus 227 ~ 227 (227)
T cd03260 227 I 227 (227)
T ss_pred C
Confidence 3
No 195
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-42 Score=383.58 Aligned_cols=214 Identities=37% Similarity=0.576 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC---HHHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ---LKWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR~ 1119 (1288)
++++||+++|++ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 146999999999999999999999999999999999999999999999999998776 466888
Q ss_pred ceEEEccCCCCch-hhHHHHHhcCCCC-------------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCCh
Q 000777 1120 QMGLVSQEPVLFN-DTIRANIAYGKGG-------------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~-gTIreNl~~g~~~-------------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
+++|+||++.+|. .|++||+.++... ...++++.++++..++.+ .....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccCCH
Confidence 9999999998886 7999999764210 111234445555554433 34456678999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1262 (1288)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3789999999999997 59999999999999999
Q ss_pred Chhhhhc
Q 000777 1263 KHENLIN 1269 (1288)
Q Consensus 1263 t~~eLl~ 1269 (1288)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9999743
No 196
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.5e-42 Score=378.06 Aligned_cols=212 Identities=27% Similarity=0.452 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++. .+++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|++||.++... ...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999642 24699999999999999999999999999999999999999999999999998764 366788999
Q ss_pred EEccCCCCc-hhhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLF-NDTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf-~gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|++|++.+| ..|++||+.+... ...+ ++++.++++..++.+.. .....+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHHHH
Confidence 999999998 6799999976311 0112 23455566655554332 23345799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998777999999999999865 999999999999999999876
No 197
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4e-42 Score=398.79 Aligned_cols=218 Identities=33% Similarity=0.520 Sum_probs=189.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|++||.++...+. .|++|+
T Consensus 3 L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 3 IEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 889999999963 369999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCCCch-hhHHHHHhcCCCC-----CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKGG-----DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~~-----~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
||||++.+|. .|++||+.++... ..+ ++++.++++..++.++.. .....||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLAD-----------RYPAQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 9999999996 5999999976321 112 235566677777655433 344689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+++|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998764 6899999999999765 99999999999999999999998
Q ss_pred CCCcHHH
Q 000777 1270 IPDGFYA 1276 (1288)
Q Consensus 1270 ~~~g~y~ 1276 (1288)
++...|.
T Consensus 227 ~p~~~~~ 233 (353)
T PRK10851 227 EPATRFV 233 (353)
T ss_pred CccchHH
Confidence 7655553
No 198
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-42 Score=386.26 Aligned_cols=227 Identities=30% Similarity=0.419 Sum_probs=191.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeecc--CCCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQ--KLQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~i~~ 1114 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3699999999999999999999999999999999999987 4999999999997 4556
Q ss_pred HHHhcceEEEccCCCCchh-hHHHHHhcCCC-CC------CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1115 KWLRQQMGLVSQEPVLFND-TIRANIAYGKG-GD------ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~g-TIreNl~~g~~-~~------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
..+|++++|+||++.+|.. |++||+.++.. .. ..++++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 01 11234566777776654332 2234556789999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777999999999999865 9999999999999999999
Q ss_pred hhhcCCCcHHHHH
Q 000777 1266 NLINIPDGFYASL 1278 (1288)
Q Consensus 1266 eLl~~~~g~y~~L 1278 (1288)
++++.+...|.+.
T Consensus 234 ~~~~~~~~~~~~~ 246 (253)
T PRK14267 234 KVFENPEHELTEK 246 (253)
T ss_pred HHHhCCCcHHHHH
Confidence 9987543344443
No 199
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.8e-42 Score=383.06 Aligned_cols=218 Identities=27% Similarity=0.508 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHH-hcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWL-RQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1121 (1288)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 369999999999999999999999999999999999999999999999999988776554 5789
Q ss_pred EEEccCCCCchh-hHHHHHhcCCCCC-C----------CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1122 GLVSQEPVLFND-TIRANIAYGKGGD-A----------TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~g-TIreNl~~g~~~~-~----------sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
+|+||++.+|.+ |++||+.++.... . ..++.. ..+.+.++.+ |++...+.....|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-----ERAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-----HHHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999986 9999998652110 0 011111 1122333333 4554556667789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999875 67899999999999966 999999999999999999998
Q ss_pred hcC
Q 000777 1268 INI 1270 (1288)
Q Consensus 1268 l~~ 1270 (1288)
+.+
T Consensus 231 ~~~ 233 (236)
T cd03219 231 RNN 233 (236)
T ss_pred ccC
Confidence 764
No 200
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-42 Score=388.98 Aligned_cols=217 Identities=33% Similarity=0.562 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|+.. .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|++||.++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999642 34699999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEccCC--CCchhhHHHHHhcCCCC-CCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEP--VLFNDTIRANIAYGKGG-DATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~--~Lf~gTIreNl~~g~~~-~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
+|+||+| .+++.|++|||.++... ..+. +++.++++..++.+++... ...||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 56788999999875211 1222 3466677777776654433 357999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998764 7899999999999988999999999999999999998764
No 201
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.2e-42 Score=401.06 Aligned_cols=222 Identities=25% Similarity=0.449 Sum_probs=195.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 3899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCC-chhhHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1122 GLVSQEPVL-FNDTIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1122 ~~V~Qd~~L-f~gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+||||++.+ |+.|++||+.++..+ ..+++.++++++.+++.++.. ....+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHH
Confidence 999999987 688999999876311 123456788888888876643 23457999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhc
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|+|+++|+++.+. .||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 4789999999999995 599999999999999999999986
Q ss_pred CCCcHHHHHH
Q 000777 1270 IPDGFYASLI 1279 (1288)
Q Consensus 1270 ~~~g~y~~L~ 1279 (1288)
. ....+++
T Consensus 229 ~--~~l~~~~ 236 (402)
T PRK09536 229 A--DTLRAAF 236 (402)
T ss_pred c--HHHHHHh
Confidence 4 3455554
No 202
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-42 Score=398.76 Aligned_cols=225 Identities=34% Similarity=0.570 Sum_probs=190.1
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW---IR 459 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~r 459 (1288)
|+++|++|+|+... ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 357999999999999999999999999999999999999999999999999998876543 47
Q ss_pred cceEEEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 460 KKIGLVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
++|+||||++.+|. .|++||+.++.. ..+.++..+ .+.+.++.+ |++......+.+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999886 699999987632 122222111 123344555 66656667778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCc
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEG 613 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 613 (1288)
|+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...+..
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~ 234 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKH 234 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCc
Confidence 9999999999999999999999999999998854 6899999999999876 999999999999999999999876443
Q ss_pred hH
Q 000777 614 AY 615 (1288)
Q Consensus 614 ~~ 615 (1288)
.+
T Consensus 235 ~~ 236 (343)
T PRK11153 235 PL 236 (343)
T ss_pred HH
Confidence 33
No 203
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-42 Score=382.15 Aligned_cols=220 Identities=31% Similarity=0.487 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC---CCCcEEEECCeeCCCCCHHHHh
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD---PQAGEVLIDGINLKEFQLQWIR 459 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~---~~~G~i~~~g~~~~~~~~~~~r 459 (1288)
.|+++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+....|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 469999999999999999999999999999999999984 6999999999999888777788
Q ss_pred cceEEEcCCCCCCchhHHHHHhcCCCCC----C----HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000777 460 KKIGLVSQEPVLFTGSIKDNIAYGKDDA----T----TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~~----~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 531 (1288)
+.|+|+||++.+|..|++||+.++.... . .+++..+++..++.+++ .+...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHH
Confidence 8999999999999999999998753210 0 11222333333332221 2335667889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+|||||+++|+++||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999988778899999999999865 999999999999999999998765
Q ss_pred CC
Q 000777 611 PE 612 (1288)
Q Consensus 611 ~~ 612 (1288)
+.
T Consensus 232 ~~ 233 (246)
T PRK14269 232 PK 233 (246)
T ss_pred CC
Confidence 33
No 204
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.3e-42 Score=399.34 Aligned_cols=212 Identities=32% Similarity=0.543 Sum_probs=180.9
Q ss_pred CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH----hcceEEEcCCCCCCc
Q 000777 398 NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI----RKKIGLVSQEPVLFT 473 (1288)
Q Consensus 398 ~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~ 473 (1288)
++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+ |++|+||+|++++|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 3569999999999999999999999999999999999999999999999999999888777 789999999999996
Q ss_pred -hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 000777 474 -GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEAT 550 (1288)
Q Consensus 474 -~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpt 550 (1288)
.||+|||.++.+. .+.++..+ .+.+.++.+ |++...++.+.+|||||||||+|||||+.+|+||||||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~ 157 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAF 157 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 5999999986432 12211111 112233333 5555566777899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchHH
Q 000777 551 SALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAYS 616 (1288)
Q Consensus 551 s~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 616 (1288)
|+||+.+++.+++.+.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|.
T Consensus 158 saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 158 SALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 99999999999999988753 6899999999998765 999999999999999999999887655554
No 205
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.9e-42 Score=394.40 Aligned_cols=227 Identities=25% Similarity=0.394 Sum_probs=190.8
Q ss_pred cEEEEEEEEECCCCC----------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccC
Q 000777 1042 EIELHHVSFKYPSRP----------DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQK 1111 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~----------~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1111 (1288)
-|+++||+++|+... ..++++||||+|++||++||||+||||||||+++|+|+++|++|+|++||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988
Q ss_pred CCHH---HHhcceEEEccCC--CCc-hhhHHHHHhcCC---CCCCCHHH----HHHHHHHhchhHHHHhhhccccccccC
Q 000777 1112 LQLK---WLRQQMGLVSQEP--VLF-NDTIRANIAYGK---GGDATEAE----IQAASEMANAHKFICSLQQGYDTMVGE 1178 (1288)
Q Consensus 1112 i~~~---~lR~~i~~V~Qd~--~Lf-~gTIreNl~~g~---~~~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge 1178 (1288)
++.. .+|++|+||+|+| .++ ..||.+|+.++. ....+.++ +.++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 8654 4678999999999 466 589999986421 01233333 344555555521 12345
Q ss_pred CCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeC
Q 000777 1179 RGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKN 1255 (1288)
Q Consensus 1179 ~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~ 1255 (1288)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5678999999999999999999999999999999999999999999998754 7899999999999976 999999999
Q ss_pred CEEEEecChhhhhcCCCcHHHHH
Q 000777 1256 GVIVEKGKHENLINIPDGFYASL 1278 (1288)
Q Consensus 1256 G~Ive~Gt~~eLl~~~~g~y~~L 1278 (1288)
|+|+|.|+++++++++...|.+.
T Consensus 238 G~ive~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHHH
Confidence 99999999999998766677663
No 206
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.4e-41 Score=380.51 Aligned_cols=221 Identities=27% Similarity=0.467 Sum_probs=197.1
Q ss_pred CCCccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHH
Q 000777 1038 DVKGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWL 1117 (1288)
Q Consensus 1038 ~~~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l 1117 (1288)
...+.|+++||++.. +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 35 ~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g----------- 98 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG----------- 98 (282)
T ss_pred CCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------
Confidence 345679999999952 3599999999999999999999999999999999999999999999998
Q ss_pred hcceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHH
Q 000777 1118 RQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAI 1197 (1288)
Q Consensus 1118 R~~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1197 (1288)
+|+|+||++.+|++|++||+.++. ...+.++.++++.+++.+.+..+|.++++.+++.+..||||||||++|||||
T Consensus 99 --~i~yv~q~~~l~~~tv~enl~~~~--~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL 174 (282)
T cd03291 99 --RISFSSQFSWIMPGTIKENIIFGV--SYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAV 174 (282)
T ss_pred --EEEEEeCcccccccCHHHHhhccc--ccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHH
Confidence 399999999999999999998752 2344566777888899999999999999999999999999999999999999
Q ss_pred cCCCCEEEEeccCCCCCHHHHHHHHHHH-HHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcCCCcHHH
Q 000777 1198 VKDPKILLLDEATSALDAESERVVQDAL-DRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYA 1276 (1288)
Q Consensus 1198 lr~p~ILlLDEaTSaLD~~te~~I~~~L-~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~ 1276 (1288)
+++|++|||||||++||+++...+.+.+ ++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+. ...|.
T Consensus 175 ~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~ 253 (282)
T cd03291 175 YKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFS 253 (282)
T ss_pred hcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHH
Confidence 9999999999999999999999988754 555568999999999999988999999999999999999999875 44565
Q ss_pred HHH
Q 000777 1277 SLI 1279 (1288)
Q Consensus 1277 ~L~ 1279 (1288)
+.+
T Consensus 254 ~~~ 256 (282)
T cd03291 254 SKL 256 (282)
T ss_pred HHH
Confidence 544
No 207
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-42 Score=383.96 Aligned_cols=227 Identities=31% Similarity=0.431 Sum_probs=193.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccCCCHHH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQKLQLKW 1116 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~~~~ 1116 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 3899999999963 3699999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcceEEEccCCCCc-hhhHHHHHhcCCC-CC------CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1117 LRQQMGLVSQEPVLF-NDTIRANIAYGKG-GD------ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1117 lR~~i~~V~Qd~~Lf-~gTIreNl~~g~~-~~------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
+|++|+|+||++.+| +.|++||+.++.. .. ..++++.++++..++.+.+.. .......+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKD-------RLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhh-------hhcCCcccCCHHHH
Confidence 999999999999755 6899999976421 01 113456777787777554321 22344568999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999986 5999999999999999999999
Q ss_pred hcCCCcHHHHH
Q 000777 1268 INIPDGFYASL 1278 (1288)
Q Consensus 1268 l~~~~g~y~~L 1278 (1288)
.+.+...+.+.
T Consensus 233 ~~~~~~~~~~~ 243 (250)
T PRK14247 233 FTNPRHELTEK 243 (250)
T ss_pred HcCCccHHHHH
Confidence 87654444443
No 208
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-42 Score=390.59 Aligned_cols=218 Identities=30% Similarity=0.524 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccC----CCHHH
Q 000777 1043 IELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQK----LQLKW 1116 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 1116 (1288)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 88999999997421 1469999999999999999999999999999999999999999999999999863 34667
Q ss_pred HhcceEEEccCC--CCchhhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1117 LRQQMGLVSQEP--VLFNDTIRANIAYGKG-GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1117 lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
+|++|+||||+| .+|+.|++||+.++.. ...+.+ .+.++++.+++.+. ........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEE----------LLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChh----------hhhCCcccCCHHHHH
Confidence 888999999998 6889999999987631 112333 34455555555321 123456789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999864 99999999999999999999
Q ss_pred hhcC
Q 000777 1267 LINI 1270 (1288)
Q Consensus 1267 Ll~~ 1270 (1288)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8764
No 209
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.8e-42 Score=377.54 Aligned_cols=204 Identities=32% Similarity=0.515 Sum_probs=175.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1119 (1288)
|+++||+++|++. .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 2369999999999999999999999999999999999999999999999999977653 34788
Q ss_pred ceEEEccCCCCch-hhHHHHHhcCCC-----CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1120 QMGLVSQEPVLFN-DTIRANIAYGKG-----GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~-gTIreNl~~g~~-----~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
+++|+||++.+|. .|++||+.++.. ....++++.++++..++.++... ...+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHA-----------LPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHH
Confidence 9999999999886 599999986411 01124566777777777655433 335799999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVI 1258 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1258 (1288)
||||+++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999975 999999999985
No 210
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-42 Score=386.99 Aligned_cols=217 Identities=32% Similarity=0.542 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++||+++|+....+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999632224699999999999999999999999999999999999999999999999999877777888899
Q ss_pred EEEcCCCC--CCchhHHHHHhcCCCC--CCHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 463 GLVSQEPV--LFTGSIKDNIAYGKDD--ATTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 463 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+||+|+|. ++..||+|||.++... .+.+ ++.++++.. |++........+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELV-----------GMQDFKEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHHHHHH
Confidence 99999984 5677999999987432 2222 233333333 444445556679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998864 6899999999999877999999999999999999988764
No 211
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.9e-42 Score=399.54 Aligned_cols=219 Identities=35% Similarity=0.540 Sum_probs=191.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++...+.. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4999999999963 3699999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||+|++.+|. .|++|||.|+.. ...+ ++++.++++..++.++..+.| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 599999998632 1122 235667777777776655443 579999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
||+++|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|+|++.|+++++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998764 789999999999875 499999999999999999999998876
Q ss_pred cHHH
Q 000777 1273 GFYA 1276 (1288)
Q Consensus 1273 g~y~ 1276 (1288)
..|.
T Consensus 238 ~~~~ 241 (375)
T PRK09452 238 NLFV 241 (375)
T ss_pred cHHH
Confidence 5553
No 212
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-42 Score=388.09 Aligned_cols=220 Identities=33% Similarity=0.504 Sum_probs=185.6
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHH----hc
Q 000777 1044 ELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWL----RQ 1119 (1288)
Q Consensus 1044 ~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~ 1119 (1288)
.++||+++|.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 46678888753 368999999999999999999999999999999999999999999999999987765443 46
Q ss_pred ceEEEccCCCCc-hhhHHHHHhcCCC-CCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1120 QMGLVSQEPVLF-NDTIRANIAYGKG-GDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf-~gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
+++|+||++.+| +.|++||+.++.. ... .++++.++++..++.+++.. ...+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHK-----------YPDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------CcccCCHHHHHHHHH
Confidence 899999999988 4699999976311 011 23456667777776655433 335799999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998753 7899999999999865 999999999999999999999876
Q ss_pred CCcHHHH
Q 000777 1271 PDGFYAS 1277 (1288)
Q Consensus 1271 ~~g~y~~ 1277 (1288)
+...|.+
T Consensus 252 ~~~~~~~ 258 (269)
T cd03294 252 PANDYVR 258 (269)
T ss_pred cCcHHHH
Confidence 5555554
No 213
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.6e-42 Score=382.44 Aligned_cols=213 Identities=36% Similarity=0.554 Sum_probs=181.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1119 (1288)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987653 45788
Q ss_pred ceEEEccCCCCch-hhHHHHHhcCCCC-------------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCCh
Q 000777 1120 QMGLVSQEPVLFN-DTIRANIAYGKGG-------------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~-gTIreNl~~g~~~-------------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
+++|+||++.+|. .|++||+.++... ...++++.++++..++.+ .......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLAD-----------KAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHh-----------hhcCCcccCCH
Confidence 9999999998886 6999999864211 011234455555555433 33455678999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999865 9999999999999999
Q ss_pred Chhhhh
Q 000777 1263 KHENLI 1268 (1288)
Q Consensus 1263 t~~eLl 1268 (1288)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999974
No 214
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.5e-42 Score=381.43 Aligned_cols=222 Identities=28% Similarity=0.508 Sum_probs=187.6
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH-hcce
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI-RKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 462 (1288)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46899999996 2469999999999999999999999999999999999999999999999999987776543 5689
Q ss_pred EEEcCCCCCCch-hHHHHHhcCCCCCCHHHH-------HHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 463 GLVSQEPVLFTG-SIKDNIAYGKDDATTEEI-------RVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 463 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+|+||++.+|.. |++||+.++........+ ........+.+.++.+ |++...+....+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999875 999999876432110000 0001111234556666 777777888899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||+.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999999876 57899999999999876 999999999999999999988654
No 215
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.9e-42 Score=397.82 Aligned_cols=218 Identities=32% Similarity=0.550 Sum_probs=187.2
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
..++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35999999999963 4699999999999999999999999999999999999999999999999999876654 468
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDD--ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
|+||||++.+|. .||+|||.|+... .+. +++.++++..+ ++......+.+|||||||||+||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~p~~LSgGq~QRVaLA 156 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQ-----------LEEFAQRKPHQLSGGQQQRVAIA 156 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcC-----------CchhhhCChhhCCHHHHHHHHHH
Confidence 999999999995 5999999987431 122 22333444444 44444555679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDP 611 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 611 (1288)
|||+++|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++.+++
T Consensus 157 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 157 RAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999998864 6899999999999865 9999999999999999999999876
Q ss_pred CchH
Q 000777 612 EGAY 615 (1288)
Q Consensus 612 ~~~~ 615 (1288)
...|
T Consensus 237 ~~~~ 240 (375)
T PRK09452 237 KNLF 240 (375)
T ss_pred ccHH
Confidence 5444
No 216
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-42 Score=387.14 Aligned_cols=218 Identities=29% Similarity=0.503 Sum_probs=190.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 38999999999743234699999999999999999999999999999999999999999999999999887778889999
Q ss_pred EEEccCC--CCchhhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEP--VLFNDTIRANIAYGKG-GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
+|+||+| .++..|+.|||.++.. ...+++ ++.++++.+++.++.. .....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKT-----------REPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 4778999999986421 122333 3456666666655432 34568999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||+++|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998764 7899999999999988999999999999999999999864
No 217
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-42 Score=379.45 Aligned_cols=217 Identities=33% Similarity=0.518 Sum_probs=184.8
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH---HHh
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK---WLR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1118 (1288)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996421 12699999999999999999999999999999999999999999999999999876543 357
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
++++|+||++.+|. .|++||+.++.. ...+ .+++.++++..++.+. ......+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHHHH
Confidence 89999999999996 699999976411 0112 3345566666655443 33345689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999865 99999999999999999999876
Q ss_pred C
Q 000777 1270 I 1270 (1288)
Q Consensus 1270 ~ 1270 (1288)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 218
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-42 Score=388.41 Aligned_cols=216 Identities=27% Similarity=0.493 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeecc--CCCHHHHhc
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQ--KLQLKWLRQ 1119 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~ 1119 (1288)
-|+++||+++|+. ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 3899999999962 246999999999999999999999999999999999999999999999999984 344667899
Q ss_pred ceEEEccCC--CCchhhHHHHHhcCCC-CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1120 QMGLVSQEP--VLFNDTIRANIAYGKG-GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1120 ~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
+++|+||+| .+|+.|++||+.++.. ...+. +.+.++++..++.++ ......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHHHHH
Confidence 999999998 5789999999986421 11232 345556666666543 34556789999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998764 789999999999997 599999999999999999999886
Q ss_pred C
Q 000777 1270 I 1270 (1288)
Q Consensus 1270 ~ 1270 (1288)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 4
No 219
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-42 Score=381.47 Aligned_cols=222 Identities=32% Similarity=0.517 Sum_probs=187.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999741 46999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||+|.+|. .|++||+.++.. ...+ ++++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999885 799999976411 0112 233445555554432 012345567899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCc
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDG 1273 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g 1273 (1288)
++++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+..
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 229 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPAN 229 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCC
Confidence 9999999999999999999999999999998753 7899999999998755 999999999999999999999865333
Q ss_pred HH
Q 000777 1274 FY 1275 (1288)
Q Consensus 1274 ~y 1275 (1288)
.|
T Consensus 230 ~~ 231 (242)
T cd03295 230 DF 231 (242)
T ss_pred hH
Confidence 33
No 220
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.3e-42 Score=397.36 Aligned_cols=220 Identities=30% Similarity=0.494 Sum_probs=190.5
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC--ceEEECCeeccCCCHHHHh
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDA--GHITLDGVEIQKLQLKWLR 1118 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~--G~I~idG~di~~i~~~~lR 1118 (1288)
+.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 56999999999963 369999999999999999999999999999999999999999 999999999987665 46
Q ss_pred cceEEEccCCCCchh-hHHHHHhcCCC-CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1119 QQMGLVSQEPVLFND-TIRANIAYGKG-GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~g-TIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
++|+||+|++.+|.. |++|||.|+.. ...+. +++.++++..++.++.. ....+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAA-----------HLPAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhh-----------CChhhCCHHHHHHHH
Confidence 789999999999965 99999987531 11232 34566677776665543 334589999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC---CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK---NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~---~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|||||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999998754 6899999999999865 9999999999999999999999
Q ss_pred cCCCcHHH
Q 000777 1269 NIPDGFYA 1276 (1288)
Q Consensus 1269 ~~~~g~y~ 1276 (1288)
+++...|-
T Consensus 228 ~~p~~~~~ 235 (362)
T TIGR03258 228 DAPADGFA 235 (362)
T ss_pred hCcCcHHH
Confidence 88665553
No 221
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.7e-42 Score=376.49 Aligned_cols=217 Identities=26% Similarity=0.416 Sum_probs=180.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHH-hcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWL-RQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1121 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999988776554 6789
Q ss_pred EEEccCCCCchh-hHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1122 GLVSQEPVLFND-TIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~g-TIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
+|+||++.+|.+ |++||+.++.. .....+.++. +.+.+..++ +++.........||||||||++||||++++
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~-~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~ 150 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAY-ARRRAKRKAR-----LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSR 150 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhh-hcCchhHHHH-----HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcC
Confidence 999999999986 99999987521 1111111111 111222221 133334456678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 151 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 151 PKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999999999875 57899999999999865 99999999999999999988764
No 222
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=377.88 Aligned_cols=221 Identities=34% Similarity=0.640 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEcCCCCCCchhHHHHHhcCCCCCC--HHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLFTGSIKDNIAYGKDDAT--TEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~~~ti~~ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+|++|++.+|..|++||+.++..... .+++ .+.++.+ |++ ......+.+||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~---------~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDV---------EYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHH---------HHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999987532211 1122 2334444 443 24456778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchHH
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAYS 616 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 616 (1288)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...+...|.
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 228 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVT 228 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHH
Confidence 9999999999999999999999999998753 6899999999999876 999999999999999999999876444444
Q ss_pred H
Q 000777 617 Q 617 (1288)
Q Consensus 617 ~ 617 (1288)
.
T Consensus 229 ~ 229 (241)
T PRK14250 229 K 229 (241)
T ss_pred H
Confidence 3
No 223
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-42 Score=383.13 Aligned_cols=224 Identities=30% Similarity=0.477 Sum_probs=189.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1114 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
..+|+.++|+||++.+|..|++||+.++.. ...+. +++.++++.+++.+.+. .........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 11222 34566777666643321 2233456789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|++|||||+.+|+||||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999998
Q ss_pred cCCCcHH
Q 000777 1269 NIPDGFY 1275 (1288)
Q Consensus 1269 ~~~~g~y 1275 (1288)
.++...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 7644444
No 224
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-42 Score=375.17 Aligned_cols=204 Identities=37% Similarity=0.573 Sum_probs=174.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+ ..+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEE
Confidence 478999999963 36999999999999999999999999999999999999999999999999997654 3578899
Q ss_pred EEccCCCCch-hhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|. .|++||+.++... ..+ ++++.++++..++.++. .....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-----------NRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHHHHH
Confidence 9999998885 6999999864210 112 23455566666554443 33446899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|+++|++|||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999998865 9999999999999876
No 225
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=384.78 Aligned_cols=222 Identities=29% Similarity=0.473 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1114 (1288)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 4999999999963 369999999999999999999999999999999999865 789999999999864 345
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC--CC----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG--GD----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~--~~----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|++|++||+.++.. .. ..++.+.++++..++.+.+. ...+..+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHH
Confidence 577899999999999999999999986411 11 11234566666666543221 223456678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998865 999999999999999999999
Q ss_pred hcCCCc
Q 000777 1268 INIPDG 1273 (1288)
Q Consensus 1268 l~~~~g 1273 (1288)
..++..
T Consensus 251 ~~~~~~ 256 (268)
T PRK14248 251 FTSPKQ 256 (268)
T ss_pred HhCCCC
Confidence 876443
No 226
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-41 Score=383.39 Aligned_cols=225 Identities=29% Similarity=0.464 Sum_probs=190.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD--P---DAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 1114 (1288)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|++||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 369999999999999999999999999999999999997 3 58999999999863 455
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CC-CCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GD-ATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~-~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|++||+.++.. .. .++ +++.++++..++.+++. ......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 678899999999999999999999986521 11 122 23455666666654432 223456678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999865 999999999999999999999
Q ss_pred hcCCCcHHH
Q 000777 1268 INIPDGFYA 1276 (1288)
Q Consensus 1268 l~~~~g~y~ 1276 (1288)
++++...|.
T Consensus 242 ~~~~~~~~~ 250 (259)
T PRK14274 242 FSNPDDQRT 250 (259)
T ss_pred hhCCCCHHH
Confidence 876444443
No 227
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-41 Score=387.44 Aligned_cols=220 Identities=33% Similarity=0.586 Sum_probs=186.0
Q ss_pred EEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC--HHHHh
Q 000777 384 IELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ--LQWIR 459 (1288)
Q Consensus 384 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~--~~~~r 459 (1288)
|+++||+|+|+... ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999997643 35678
Q ss_pred cceEEEcCCC--CCCchhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCcc--ccccCCCCCCChHHHHHHHH
Q 000777 460 KKIGLVSQEP--VLFTGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGID--TLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 460 ~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~~~~~g~~LSgGqkqri~l 533 (1288)
++||||||+| .+|+.|++|||.++.. ..+.++..+. +.+.++.+ |+. +.....+.+||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5788999999998632 1233222221 12233443 554 45677788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999998854 6899999999999865 999999999999999999998654
No 228
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-42 Score=388.16 Aligned_cols=220 Identities=28% Similarity=0.535 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC----CCHHH
Q 000777 384 IELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE----FQLQW 457 (1288)
Q Consensus 384 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 457 (1288)
|+++|++|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996321 1369999999999999999999999999999999999999999999999999863 33556
Q ss_pred HhcceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000777 458 IRKKIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 458 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 532 (1288)
+|+.|+||+|+| .+|..|+.||+.|+... .+.++... .+.+.++.+ |++ ......+.+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 788999999998 78889999999987432 22222211 112333444 443 3456777899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999999999988754 7899999999999865 999999999999999999998754
No 229
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-42 Score=389.08 Aligned_cols=218 Identities=24% Similarity=0.465 Sum_probs=184.4
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccC---------
Q 000777 1043 IELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQK--------- 1111 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--------- 1111 (1288)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997431 1369999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CCHHHHhcceEEEccCC--CCchhhHHHHHhcCCCC-CCCH----HHHHHHHHHhchhHHHHhhh
Q 000777 1112 ---------------LQLKWLRQQMGLVSQEP--VLFNDTIRANIAYGKGG-DATE----AEIQAASEMANAHKFICSLQ 1169 (1288)
Q Consensus 1112 ---------------i~~~~lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~~-~~sd----~ei~~al~~a~l~~~i~~lp 1169 (1288)
.+...+|++|+||||+| .+|..|++|||.++... ..+. +++.++++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------ 156 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDE------ 156 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh------
Confidence 13467889999999986 68889999999876321 2333 33455566555531
Q ss_pred ccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-hc
Q 000777 1170 QGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIK-NA 1247 (1288)
Q Consensus 1170 ~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~ 1247 (1288)
........+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .|
T Consensus 157 ----~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~a 232 (305)
T PRK13651 157 ----SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWT 232 (305)
T ss_pred ----hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhC
Confidence 12345567899999999999999999999999999999999999999999998875 4789999999999875 59
Q ss_pred CEEEEEeCCEEEEecChhhhhcC
Q 000777 1248 DMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1248 DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||++|++|++++.|+++++.+.
T Consensus 233 drv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 233 KRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999998865
No 230
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-42 Score=392.64 Aligned_cols=229 Identities=26% Similarity=0.391 Sum_probs=189.0
Q ss_pred EEEEEEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC----CCCceEEECCeeccCCCHHHH
Q 000777 1043 IELHHVSFKYPSRPD-VQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD----PDAGHITLDGVEIQKLQLKWL 1117 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~l 1117 (1288)
++++||++.|+.... .++|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|++||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974321 369999999999999999999999999999999999997 489999999999998887665
Q ss_pred hc----ceEEEccCCC--Cch-hhHH----HHHhcCC--CCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1118 RQ----QMGLVSQEPV--LFN-DTIR----ANIAYGK--GGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1118 R~----~i~~V~Qd~~--Lf~-gTIr----eNl~~g~--~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
|+ +|+||||+|. ++. -|+. +|+.... ......+++.++++.+++.+.. ..++..+.+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhCC
Confidence 43 6999999994 332 3454 4543321 1111234577778888776432 12345677899
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEe
Q 000777 1185 GGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEK 1261 (1288)
Q Consensus 1185 gGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~ 1261 (1288)
||||||++|||||+.+|++||+||||++||+.+...|.+.|+++.+ +.|+|+|||+++.+. .||||+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 789999999999995 5999999999999999
Q ss_pred cChhhhhcCCCcHHHHHH
Q 000777 1262 GKHENLINIPDGFYASLI 1279 (1288)
Q Consensus 1262 Gt~~eLl~~~~g~y~~L~ 1279 (1288)
|+++++++++...|.+.+
T Consensus 236 g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CCHHHHhhCCCChHHHHH
Confidence 999999988777776543
No 231
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-42 Score=382.35 Aligned_cols=226 Identities=31% Similarity=0.481 Sum_probs=190.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1114 (1288)
.|+++||+|+|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 3899999999963 369999999999999999999999999999999999997 479999999999854 345
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDA-----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|+.++|++|++.+|+.|++||+.++.. ... .++++.++++..++++.. + ...+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~----~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---K----DNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---H----HHhccChhhCCHHHH
Confidence 667889999999999999999999986421 011 123455666666664321 1 123455678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999999
Q ss_pred hcCCCcHHHH
Q 000777 1268 INIPDGFYAS 1277 (1288)
Q Consensus 1268 l~~~~g~y~~ 1277 (1288)
...+...|.+
T Consensus 234 ~~~~~~~~~~ 243 (251)
T PRK14251 234 FIAPKKQITS 243 (251)
T ss_pred HhCCCCHHHH
Confidence 8765444443
No 232
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=395.02 Aligned_cols=221 Identities=32% Similarity=0.536 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3789999999963 469999999999999999999999999999999999999999999999999976554 35689
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC------CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD------ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
+||+|++.+|. .|++||+.|+... .+.++..+ .+.+.++.+ |++......+.+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 99999999996 5999999987431 12221111 122333444 4555556677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
||+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~ 229 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPA 229 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998864 5799999999999876 99999999999999999999988765
Q ss_pred chH
Q 000777 613 GAY 615 (1288)
Q Consensus 613 ~~~ 615 (1288)
..|
T Consensus 230 ~~~ 232 (353)
T PRK10851 230 TRF 232 (353)
T ss_pred chH
Confidence 444
No 233
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-42 Score=383.15 Aligned_cols=224 Identities=31% Similarity=0.516 Sum_probs=190.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccCCC--HH
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQKLQ--LK 1115 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i~--~~ 1115 (1288)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|+++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 369999999999999999999999999999999999986 47999999999987543 34
Q ss_pred HHhcceEEEccCCCCchhhHHHHHhcCC--CCC-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1116 WLRQQMGLVSQEPVLFNDTIRANIAYGK--GGD-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~gTIreNl~~g~--~~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
.+|++++|+||++.+|.+|++||+.++. ... ..++++.++++..++.+++. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 6789999999999999999999998641 110 12345667777777654322 234456678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999875 999999999999999999999
Q ss_pred hcCCCcHHH
Q 000777 1268 INIPDGFYA 1276 (1288)
Q Consensus 1268 l~~~~g~y~ 1276 (1288)
++.+...|.
T Consensus 236 ~~~~~~~~~ 244 (251)
T PRK14244 236 FKNPQSSKT 244 (251)
T ss_pred hcCCCChHH
Confidence 977555443
No 234
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.7e-41 Score=376.28 Aligned_cols=213 Identities=29% Similarity=0.517 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 36999999999999999999999999999999999999999999999999998766543 46899
Q ss_pred EEccCCCC-chhhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVL-FNDTIRANIAYGKG-GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~L-f~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+ +..|++||+.++.. ...+.+ ++.+.++.. |++........+||||||||++||||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARL-----------GLAERADDKVRELNGGHRRRVEIARA 146 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CChhhhcCChhhCCHHHHHHHHHHHH
Confidence 99999987 56899999976421 112222 233333333 44444556677899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
++++|+||||||||++||+.+...+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999999999875 37899999999999988999999999999999999999864
No 235
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=383.03 Aligned_cols=222 Identities=30% Similarity=0.471 Sum_probs=192.0
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CC
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQ 1113 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1113 (1288)
..|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 35999999999963 469999999999999999999999999999999999997 589999999999864 34
Q ss_pred HHHHhcceEEEccCCCCchhhHHHHHhcCCC--CCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1114 LKWLRQQMGLVSQEPVLFNDTIRANIAYGKG--GDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~--~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
...+|+.++||||++.+|..|++||+.++.. ... .++++.++++..++.+++. ...+..+..|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 6678999999999999999999999986421 111 2345666777777765442 33456678999999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhh
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999865 99999999999999999999
Q ss_pred hhcCCC
Q 000777 1267 LINIPD 1272 (1288)
Q Consensus 1267 Ll~~~~ 1272 (1288)
+.+.+.
T Consensus 249 ~~~~~~ 254 (267)
T PRK14237 249 IFTNPK 254 (267)
T ss_pred HhcCCC
Confidence 987544
No 236
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.4e-41 Score=380.91 Aligned_cols=219 Identities=33% Similarity=0.502 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC---------
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ--------- 1113 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------- 1113 (1288)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 36999999999999999999999999999999999999999999999999987553
Q ss_pred ----HHHHhcceEEEccCCCCch-hhHHHHHhcCCC--CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCC
Q 000777 1114 ----LKWLRQQMGLVSQEPVLFN-DTIRANIAYGKG--GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQ 1182 (1288)
Q Consensus 1114 ----~~~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~ 1182 (1288)
...+|++++|++|++.+|. .|++||+.++.. .... ++++.++++..++.++ .......
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADK-----------ADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhH-----------hhcChhh
Confidence 2467889999999998885 799999986411 0111 2345555555555443 3445578
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEE
Q 000777 1183 LSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIV 1259 (1288)
Q Consensus 1183 LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv 1259 (1288)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999865 9999999999999
Q ss_pred EecChhhhhcCCCcHH
Q 000777 1260 EKGKHENLINIPDGFY 1275 (1288)
Q Consensus 1260 e~Gt~~eLl~~~~g~y 1275 (1288)
+.|+++++.+.+...|
T Consensus 227 ~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 227 EQGKPDEIFRQPKEER 242 (252)
T ss_pred EeCCHHHHhcCCCcHH
Confidence 9999999987644333
No 237
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=380.20 Aligned_cols=225 Identities=34% Similarity=0.520 Sum_probs=191.4
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccC--CC
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQK--LQ 1113 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 1113 (1288)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999963 3699999999999999999999999999999999999863 69999999999874 45
Q ss_pred HHHHhcceEEEccCCCCchhhHHHHHhcCCC-CC-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1114 LKWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GD-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
...+|++++|+||++.+|+.|++||+.++.. .. ..++++.++++.+++.+.+. ......+..|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 5678999999999999999999999986521 11 12345566666666654332 22345567899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhh
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778899999999998865 99999999999999999999
Q ss_pred hhcCCCcHH
Q 000777 1267 LINIPDGFY 1275 (1288)
Q Consensus 1267 Ll~~~~g~y 1275 (1288)
+...+...+
T Consensus 232 ~~~~~~~~~ 240 (250)
T PRK14240 232 LFTNPKDKR 240 (250)
T ss_pred HHhCCCChH
Confidence 987644444
No 238
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=383.17 Aligned_cols=225 Identities=32% Similarity=0.490 Sum_probs=191.6
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CC
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQ 1113 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1113 (1288)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999963 369999999999999999999999999999999999987 689999999999863 56
Q ss_pred HHHHhcceEEEccCCCCchhhHHHHHhcCCCC-CC---CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1114 LKWLRQQMGLVSQEPVLFNDTIRANIAYGKGG-DA---TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~~---sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
...+|++++||||++.+|..|++||+.++... .. .++++.++++.+++.+.+ +.........|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 67789999999999999999999999875211 11 134556667776664332 23345566789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeC-----------CE
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKN-----------GV 1257 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-----------G~ 1257 (1288)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998777899999999998865 999999996 77
Q ss_pred EEEecChhhhhcCCCcHH
Q 000777 1258 IVEKGKHENLINIPDGFY 1275 (1288)
Q Consensus 1258 Ive~Gt~~eLl~~~~g~y 1275 (1288)
++|.|+++++.+.+...|
T Consensus 242 ~~~~~~~~~~~~~~~~~~ 259 (269)
T PRK14259 242 LVEFNETKKIFNSPKQKA 259 (269)
T ss_pred EEEeCCHHHHHhCcCChH
Confidence 999999999987644444
No 239
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-41 Score=368.56 Aligned_cols=200 Identities=37% Similarity=0.567 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCC--cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcc
Q 000777 1043 IELHHVSFKYPSRPD--VQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~--~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
|+++||+++|++..+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 578999999974311 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1121 MGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
|+|+||+|.+|++|++||+.++. ..++++.+++++.+++.+++..+|.|+++.+++.+..||||||||++|||||+.+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~ 145 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGK--PFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSD 145 (204)
T ss_pred EEEEecCchhccCcHHHHhccCC--CcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999998852 3456678888999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHH-HHHHHc-CCceEEEEecCchhhhhcCEEEEEeCCE
Q 000777 1201 PKILLLDEATSALDAESERVVQD-ALDRVM-KNRTTVVVAHRLSTIKNADMIAVVKNGV 1257 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~-~L~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1257 (1288)
|+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||+|++|++|+
T Consensus 146 p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 146 ADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 99999999999999999988877 466553 4689999999999998899999999985
No 240
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=376.79 Aligned_cols=211 Identities=29% Similarity=0.446 Sum_probs=179.1
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH---H
Q 000777 1042 EIELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW---L 1117 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 1117 (1288)
-++++||+++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997421 146999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-cceEEEccCCCCchh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHH
Q 000777 1118 R-QQMGLVSQEPVLFND-TIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQR 1190 (1288)
Q Consensus 1118 R-~~i~~V~Qd~~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQr 1190 (1288)
| +.++|+||++.+|.. |++||+.++.. .... ++++.++++..++.++ ......+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3 689999999998865 99999976310 0111 2345566666555433 344557899999999
Q ss_pred HHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhhcCEEEEEeCCEEEEecC
Q 000777 1191 VAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGK 1263 (1288)
Q Consensus 1191 laiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt 1263 (1288)
++||||++.+|+||||||||++||+++...+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999999999999999999998775
No 241
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-41 Score=398.69 Aligned_cols=219 Identities=29% Similarity=0.489 Sum_probs=188.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 3899999999963 369999999999999999999999999999999999999999999999999987664 35789
Q ss_pred EEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||||++.+|. .|++||+.++.. ...+ ++++.++++..++.++. .....+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHH
Confidence 99999999996 599999987521 1122 23466667776665443 3334689999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998753 7899999999998865 99999999999999999999998765
Q ss_pred cHHH
Q 000777 1273 GFYA 1276 (1288)
Q Consensus 1273 g~y~ 1276 (1288)
..|-
T Consensus 227 ~~~~ 230 (369)
T PRK11000 227 NRFV 230 (369)
T ss_pred cHHH
Confidence 5443
No 242
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=382.79 Aligned_cols=224 Identities=31% Similarity=0.496 Sum_probs=192.7
Q ss_pred CccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccC--C
Q 000777 1040 KGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQK--L 1112 (1288)
Q Consensus 1040 ~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i 1112 (1288)
.+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|++||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 446999999999963 3699999999999999999999999999999999999984 89999999999864 3
Q ss_pred CHHHHhcceEEEccCCCCchhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1113 QLKWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDA-----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1113 ~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
+...+|++++|+||++.+|++|++||+.++.. ... .++++.++++.+++.+.+. +..+..+..||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999986421 111 1234677777777765443 2345667899999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
||||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred hhhcCCCc
Q 000777 1266 NLINIPDG 1273 (1288)
Q Consensus 1266 eLl~~~~g 1273 (1288)
++.+.+..
T Consensus 253 ~~~~~~~~ 260 (272)
T PRK14236 253 TLFTSPAK 260 (272)
T ss_pred HHhcCCCc
Confidence 99875433
No 243
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=389.61 Aligned_cols=228 Identities=30% Similarity=0.453 Sum_probs=190.5
Q ss_pred cEEEEEEEEECCCCC-------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH
Q 000777 1042 EIELHHVSFKYPSRP-------DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~-------~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 1114 (1288)
-|+++||++.|+... ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+.+++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 389999999997321 2469999999999999999999999999999999999999999999999999988764
Q ss_pred ---HHHhcceEEEccCCC--Cch-hhHHHHHhcCC--CCCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCC
Q 000777 1115 ---KWLRQQMGLVSQEPV--LFN-DTIRANIAYGK--GGDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQ 1182 (1288)
Q Consensus 1115 ---~~lR~~i~~V~Qd~~--Lf~-gTIreNl~~g~--~~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~ 1182 (1288)
..+|++|+||||+|. |+. -|+.+|+.... .... ..+++.++++.+++.+ ..++ .....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~----~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYD----RYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhc----CCCcc
Confidence 457889999999993 554 48888885210 0011 2245666777777642 1233 34568
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEE
Q 000777 1183 LSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIV 1259 (1288)
Q Consensus 1183 LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv 1259 (1288)
||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999975 9999999999999
Q ss_pred EecChhhhhcCCCcHHHHHH
Q 000777 1260 EKGKHENLINIPDGFYASLI 1279 (1288)
Q Consensus 1260 e~Gt~~eLl~~~~g~y~~L~ 1279 (1288)
|.|+++++++++...|.+.+
T Consensus 235 e~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcCCCCHHHHHH
Confidence 99999999987666676643
No 244
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=384.49 Aligned_cols=217 Identities=31% Similarity=0.594 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++|++++|++. ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999887878899999
Q ss_pred EEEccCC--CCchhhHHHHHhcCCC-CCCCHHH----HHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEP--VLFNDTIRANIAYGKG-GDATEAE----IQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
+|+||+| .++..|++||+.++.. ...+.++ +.++++..++.++ +.....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDY-----------LDKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCCcccCCHHHHHHHHHH
Confidence 9999998 4567899999986421 1123332 4455555565544 3344578999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 4899999999999888999999999999999999998764
No 245
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=379.55 Aligned_cols=225 Identities=31% Similarity=0.463 Sum_probs=187.1
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 454 (1288)
..++++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 35999999999963 4699999999999999999999999999999999999997 48999999998853 34
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCCC---CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA---TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
...+|++|+|++|++.+|..|++|||.++.... .. +++.++++..++.+. +.......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNE-------VKDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchh-------hHHHHhCCcccCCHHH
Confidence 456788999999999999899999999863211 11 223333333333211 1223445678999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhH
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999866 99999999999999999999
Q ss_pred HhcCCCchHH
Q 000777 607 LVEDPEGAYS 616 (1288)
Q Consensus 607 l~~~~~~~~~ 616 (1288)
+.+++...|.
T Consensus 236 ~~~~~~~~~~ 245 (254)
T PRK14273 236 LFFNPKNTKT 245 (254)
T ss_pred HHhCCCChHH
Confidence 9876554443
No 246
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.4e-41 Score=377.72 Aligned_cols=220 Identities=32% Similarity=0.524 Sum_probs=185.4
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeeCCCC--CHH
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ-----AGEVLIDGINLKEF--QLQ 456 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~~--~~~ 456 (1288)
++++||+++|+. .++++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 46999999999999999999999999999999999999998 99999999998753 345
Q ss_pred HHhcceEEEcCCCCCCchhHHHHHhcCCCC---CCHHHHHHHHHHcCHHHHHHhCCCCcc----ccccCCCCCCChHHHH
Q 000777 457 WIRKKIGLVSQEPVLFTGSIKDNIAYGKDD---ATTEEIRVATELANAAKFIDKLPQGID----TLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~----t~~~~~g~~LSgGqkq 529 (1288)
..++.++|+||++.+|..|++||+.++... ....+..+ .+.+.++.+ |+. ......+.+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHHH
Confidence 667899999999999999999999875321 11111111 112233333 443 4456777899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999999865 9999999999999999999987
Q ss_pred cCCCc
Q 000777 609 EDPEG 613 (1288)
Q Consensus 609 ~~~~~ 613 (1288)
+.+..
T Consensus 232 ~~~~~ 236 (247)
T TIGR00972 232 TNPKE 236 (247)
T ss_pred hCCCC
Confidence 65443
No 247
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-41 Score=380.76 Aligned_cols=222 Identities=29% Similarity=0.453 Sum_probs=188.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD--P---DAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i--~~ 1114 (1288)
-++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 3899999999963 369999999999999999999999999999999999954 6 499999999998643 34
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC--CC----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG--GD----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~--~~----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++||||++.+|+.|++||+.++.. .. ..++++.++++.+++.+.+. +..+....+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999985411 11 12344556677776654332 234556778999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999998865 999999999999999999999
Q ss_pred hcCCCc
Q 000777 1268 INIPDG 1273 (1288)
Q Consensus 1268 l~~~~g 1273 (1288)
.+.+..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14239 235 FMNPKH 240 (252)
T ss_pred HhCCCC
Confidence 876443
No 248
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.1e-41 Score=395.31 Aligned_cols=222 Identities=30% Similarity=0.496 Sum_probs=189.1
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC--cEEEECCeeCCCCCHHHHh
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQA--GEVLIDGINLKEFQLQWIR 459 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~--G~i~~~g~~~~~~~~~~~r 459 (1288)
+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 57999999999963 469999999999999999999999999999999999999999 999999999976655 35
Q ss_pred cceEEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 460 KKIGLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
+.|+||+|++.+|. .||+|||.|+... .+..+... .+.+.++.+ |++........+|||||||||+||||
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLARA 151 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIARA 151 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHHH
Confidence 68999999999995 5999999987431 22222111 122334444 56556667778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC---CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV---NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
|+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 152 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~ 231 (362)
T TIGR03258 152 IAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPA 231 (362)
T ss_pred HhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcC
Confidence 9999999999999999999999999999988764 5799999999999866 99999999999999999999998765
Q ss_pred chH
Q 000777 613 GAY 615 (1288)
Q Consensus 613 ~~~ 615 (1288)
..|
T Consensus 232 ~~~ 234 (362)
T TIGR03258 232 DGF 234 (362)
T ss_pred cHH
Confidence 444
No 249
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=385.76 Aligned_cols=220 Identities=31% Similarity=0.558 Sum_probs=187.6
Q ss_pred EEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCC----CHHH
Q 000777 384 IELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEF----QLQW 457 (1288)
Q Consensus 384 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 457 (1288)
++++|++|+|+... ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996322 24699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccc-cccCCCCCCChHHHHHHH
Q 000777 458 IRKKIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDT-LVGEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 458 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGqkqri~ 532 (1288)
+|++||||||+| .+|..|++|||.++... .+.++..+. +.+.++.+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 68888999999986322 233222221 23445555 7763 456788999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
|||||+.+|+||||||||++||+.+...+.+.++++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999875 36899999999999865 99999999999999999998876
Q ss_pred C
Q 000777 610 D 610 (1288)
Q Consensus 610 ~ 610 (1288)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 250
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=377.95 Aligned_cols=216 Identities=35% Similarity=0.556 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876543 256899
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCCCC------CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKDDA------TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
|++|+|.+|. .|++||+.++.... ...+.. ..+.+.++.+ |++......+.+||||||||++||||
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~a 150 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARA 150 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999999885 69999999764211 111111 1123344544 56555667778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCC
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDP 611 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 611 (1288)
|+.+|++|||||||++||+++++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 228 (239)
T cd03296 151 LAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHP 228 (239)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCC
Confidence 9999999999999999999999999999998854 6899999999998865 9999999999999999999987653
No 251
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=383.32 Aligned_cols=212 Identities=31% Similarity=0.563 Sum_probs=182.5
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
-|+++|++|+|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+..+++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999962 24699999999999999999999999999999999999999999999999999887778888899
Q ss_pred EEEcCCC--CCCchhHHHHHhcCCCC--CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 463 GLVSQEP--VLFTGSIKDNIAYGKDD--ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 463 ~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+||+|+| .++..|++||+.|+... .+. +++..+++..++ .........+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L-----------~~~~~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRM-----------WDFRDKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC-----------HHHhcCChhhCCHHHHHHHHHH
Confidence 9999998 57888999999986321 222 223333344343 3334455579999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
|||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999999998854 6899999999999865 999999999999999998754
No 252
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=380.22 Aligned_cols=228 Identities=29% Similarity=0.482 Sum_probs=193.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1114 (1288)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 3899999999963 3699999999999999999999999999999999999984 899999999998653 34
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC--CC----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG--GD----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~--~~----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|++||+.++.. .. ..++++.++++..++.+.+. ...+....+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 01 12334666777777765432 224556778999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998755 999999999999999999999
Q ss_pred hcCCCcHHHHHH
Q 000777 1268 INIPDGFYASLI 1279 (1288)
Q Consensus 1268 l~~~~g~y~~L~ 1279 (1288)
.+++...|.+.+
T Consensus 233 ~~~~~~~~~~~~ 244 (250)
T PRK14262 233 VERPKNKLTEEY 244 (250)
T ss_pred HhCCCChHHHHH
Confidence 876444455433
No 253
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=380.41 Aligned_cols=224 Identities=31% Similarity=0.477 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc---CCC--CCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRF---YDP--DAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl---~~p--~~G~I~idG~di~~i--~~ 1114 (1288)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 3699999999999999999999999999999999997 454 589999999998754 35
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CC-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GD-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|++||+.++.. .. ..+++++++++..++.+++. +.....+..||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 678899999999999999999999976421 01 12345666777666654432 234456778999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999855 999999999999999999999
Q ss_pred hcCCCcHH
Q 000777 1268 INIPDGFY 1275 (1288)
Q Consensus 1268 l~~~~g~y 1275 (1288)
.+++...|
T Consensus 233 ~~~~~~~~ 240 (250)
T PRK14245 233 FTNPEKEA 240 (250)
T ss_pred hcCCCChH
Confidence 87644433
No 254
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=385.54 Aligned_cols=218 Identities=27% Similarity=0.474 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCC---CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC-HHHH
Q 000777 1042 EIELHHVSFKYPSRP---DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ-LKWL 1117 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~---~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~l 1117 (1288)
-|+++||+++|++.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999997653 4567
Q ss_pred hcceEEEccCCC--CchhhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHH
Q 000777 1118 RQQMGLVSQEPV--LFNDTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQR 1190 (1288)
Q Consensus 1118 R~~i~~V~Qd~~--Lf~gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQr 1190 (1288)
|++++|+||+|. +|..|+.+|+.++... ..+ ++++.++++.+++.++..+ ...+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRH-----------APHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHH
Confidence 899999999984 7777999999875211 122 3456777777777665443 346899999999
Q ss_pred HHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhh
Q 000777 1191 VAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1191 laiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999875 378999999999999889999999999999999999998
Q ss_pred cC
Q 000777 1269 NI 1270 (1288)
Q Consensus 1269 ~~ 1270 (1288)
++
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 65
No 255
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=371.35 Aligned_cols=204 Identities=27% Similarity=0.502 Sum_probs=177.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999963 36999999999999 99999999999999999999999999999999999998776 67899999
Q ss_pred EEccCCCCchh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|.+ |++||+.+... ...+ ++++.++++..++.++. ++ ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-------KK----KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-------hC----chhhCCHHHHHHHHHHHH
Confidence 99999999875 99999975310 0111 34566777777775542 22 345799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999965 9999999999999875
No 256
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=378.89 Aligned_cols=224 Identities=26% Similarity=0.468 Sum_probs=190.2
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCceEEECCeeccCC--C
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD--P---DAGHITLDGVEIQKL--Q 1113 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i--~ 1113 (1288)
+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|++||.++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 56999999999963 369999999999999999999999999999999999986 4 689999999998643 4
Q ss_pred HHHHhcceEEEccCCCCch-hhHHHHHhcCCC--CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChh
Q 000777 1114 LKWLRQQMGLVSQEPVLFN-DTIRANIAYGKG--GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGG 1186 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1186 (1288)
...+|++++|+||++.+|. .|++||+.++.. ...+ ++++.++++..++.+++.. ..+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCHH
Confidence 5578899999999999987 699999976311 1111 2345666777776554422 233456789999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
||||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|+|++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred hhhcCCCcH
Q 000777 1266 NLINIPDGF 1274 (1288)
Q Consensus 1266 eLl~~~~g~ 1274 (1288)
++...+...
T Consensus 233 ~~~~~~~~~ 241 (252)
T PRK14256 233 KIFTTPEKK 241 (252)
T ss_pred HHHhCCCcH
Confidence 998764443
No 257
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-42 Score=364.33 Aligned_cols=218 Identities=33% Similarity=0.517 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCe---eccCCCHHHHh
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGV---EIQKLQLKWLR 1118 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~---di~~i~~~~lR 1118 (1288)
.|.++|++..|+.. ++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++. ..-.
T Consensus 2 ~i~i~~~~~~~~~~---~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~--~~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGAF---GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNL--AVRD 76 (345)
T ss_pred ceeehhhhhhcccc---cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhcc--chhh
Confidence 37889999999743 6899999999999999999999999999999999999999999999999 76663 3445
Q ss_pred cceEEEccCCCCc-hhhHHHHHhcCCCC-------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHH
Q 000777 1119 QQMGLVSQEPVLF-NDTIRANIAYGKGG-------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQR 1190 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf-~gTIreNl~~g~~~-------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQr 1190 (1288)
++||+|+|+..|| ..||++||+||..- .....++.+.++.+++..+-+ ..+.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHHHHH
Confidence 7899999999888 68999999999521 122345555666666654432 3467899999999
Q ss_pred HHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhh
Q 000777 1191 VAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1191 laiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
+||||||..+|++|+||||.++||+.-...+.+-|++... +.|+++|||+.+.+. .||||+||++|+|.+.|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998753 689999999999875 5999999999999999999999
Q ss_pred hcCCCcHH
Q 000777 1268 INIPDGFY 1275 (1288)
Q Consensus 1268 l~~~~g~y 1275 (1288)
...|++.|
T Consensus 226 ~~~P~s~f 233 (345)
T COG1118 226 YDHPASRF 233 (345)
T ss_pred hcCCCccc
Confidence 98887765
No 258
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.4e-41 Score=372.73 Aligned_cols=208 Identities=28% Similarity=0.513 Sum_probs=177.3
Q ss_pred EEEEEEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1043 IELHHVSFKYPSRPD-VQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
|+++||+++|++... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 269999999999999999999999999999999999999999999999999975 456778999
Q ss_pred EEEccCCCCchh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFND-TIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+|+||++.+|.. |++||+.+... ...+ ++++.++++..++.+. ......+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975311 1112 3345566666665444 33456689999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47899999999998865 9999999999998865
No 259
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=383.96 Aligned_cols=215 Identities=29% Similarity=0.483 Sum_probs=187.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998777788899999
Q ss_pred EEccCC--CCchhhHHHHHhcCCC-CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1123 LVSQEP--VLFNDTIRANIAYGKG-GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1123 ~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
||||+| .+|+.|++||+.++.. ...+. +.+.++++..++.++.. .....||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-----------RVPHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHHHHHH
Confidence 999998 4788999999986421 11232 34566777777665433 334589999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999998754 789999999999985 5999999999999999999999864
No 260
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.8e-41 Score=382.66 Aligned_cols=225 Identities=27% Similarity=0.414 Sum_probs=189.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH---HHh
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK---WLR 1118 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1118 (1288)
-|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999876543 457
Q ss_pred cceEEEccCCCCchh-hHHHHHhcCCC--CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1119 QQMGLVSQEPVLFND-TIRANIAYGKG--GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~g-TIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
++++|+||++.+|.+ |++||+.++.. ...+. +++.++++..++.+. .......||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 889999999999976 99999975311 11222 234445555554332 2334568999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 6899999999999866 9999999999999999999998
Q ss_pred cCCCcHHHHHHH
Q 000777 1269 NIPDGFYASLIA 1280 (1288)
Q Consensus 1269 ~~~~g~y~~L~~ 1280 (1288)
+++...+..++.
T Consensus 233 ~~~~~~~~~~~~ 244 (269)
T PRK11831 233 ANPDPRVRQFLD 244 (269)
T ss_pred cCCcHHHHHHHH
Confidence 764445566654
No 261
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=384.54 Aligned_cols=220 Identities=31% Similarity=0.557 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC----CCHHH
Q 000777 384 IELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE----FQLQW 457 (1288)
Q Consensus 384 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 457 (1288)
++++|++|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 2469999999999999999999999999999999999999999999999999863 33556
Q ss_pred HhcceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000777 458 IRKKIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 458 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 532 (1288)
.+++|+||+|+| .+|+.||+|||.|+... .+.++..+ .+.+.++.+ |++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 778999999998 68888999999986432 22322211 122334444 554 3346677899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999998853 6899999999999865 99999999999999999999876
Q ss_pred C
Q 000777 610 D 610 (1288)
Q Consensus 610 ~ 610 (1288)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 4
No 262
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=379.88 Aligned_cols=219 Identities=29% Similarity=0.461 Sum_probs=186.7
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC--------
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL-------- 1112 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i-------- 1112 (1288)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999963 3699999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHHhcceEEEccCCCCch-hhHHHHHhcCCC--CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCC
Q 000777 1113 -----QLKWLRQQMGLVSQEPVLFN-DTIRANIAYGKG--GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERG 1180 (1288)
Q Consensus 1113 -----~~~~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G 1180 (1288)
....+|++++||||++.+|. .|++||+.++.. .... ++++.++++..++.++. .....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 13567889999999999997 599999976310 0111 23455566666554432 13456
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 1181 LQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVI 1258 (1288)
Q Consensus 1181 ~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1258 (1288)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 7899999999999999999999999999999999999999999999875 47999999999999986 999999999999
Q ss_pred EEecChhhhhcCCC
Q 000777 1259 VEKGKHENLINIPD 1272 (1288)
Q Consensus 1259 ve~Gt~~eLl~~~~ 1272 (1288)
++.|+++++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999986544
No 263
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-41 Score=372.35 Aligned_cols=210 Identities=24% Similarity=0.440 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999998653 356788999
Q ss_pred EEccCCCCch-hhHHHHHhcCCC-CCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKG-GDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|. .|++||+.++.. ... .++++.++++..++.++.. .....||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 9999998887 499999975310 011 2345666777777655432 2345799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
++.+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999998753 6899999999999875 999999999999999998875
No 264
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=383.11 Aligned_cols=217 Identities=30% Similarity=0.527 Sum_probs=189.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC---ceEEECCeeccCCCHHHHh
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDA---GHITLDGVEIQKLQLKWLR 1118 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~---G~I~idG~di~~i~~~~lR 1118 (1288)
.|+++|++|+|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|++||.++...+...+|
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 58999999999742 2469999999999999999999999999999999999999988 8999999999887777889
Q ss_pred cceEEEccCC--CCchhhHHHHHhcCCC-CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1119 QQMGLVSQEP--VLFNDTIRANIAYGKG-GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1119 ~~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
++++||||+| .+++.|++|||.++.. ...+. +++.++++..++.++.. ....+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYID-----------SEPANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHH
Confidence 9999999998 4678999999987521 12333 33566677777655433 34468999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhc
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
+|||||+.+|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|++++++.
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 789999999999998899999999999999999999876
Q ss_pred C
Q 000777 1270 I 1270 (1288)
Q Consensus 1270 ~ 1270 (1288)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 4
No 265
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-41 Score=379.28 Aligned_cols=220 Identities=32% Similarity=0.526 Sum_probs=185.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 455 (1288)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5999999999963 469999999999999999999999999999999999974 689999999999864 345
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-C----HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-T----TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..+|+.++|++|++.+|..|++||+.++... . . .+++.++++..++.+.+ .+..+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHHH
Confidence 5678899999999999988999999875311 1 1 12233334433332211 2345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999999998
Q ss_pred hcCCC
Q 000777 608 VEDPE 612 (1288)
Q Consensus 608 ~~~~~ 612 (1288)
.+.+.
T Consensus 236 ~~~~~ 240 (253)
T PRK14242 236 FTRPR 240 (253)
T ss_pred HcCCC
Confidence 76543
No 266
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=378.99 Aligned_cols=225 Identities=32% Similarity=0.519 Sum_probs=188.5
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--C
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--F 453 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~ 453 (1288)
.+.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 356999999999963 469999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHHhcceEEEcCCCCCCchhHHHHHhcCCCC---CCHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 454 QLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD---ATTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 454 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
+...+|++|+|++|++.+|..|++||+.++... .+.+ ++.++++..++.+ ++....++...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWN-------EVKDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCCh-------hhHHHHhcCCCCCCHH
Confidence 456778899999999999999999999876321 2222 2333333333211 2234566778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChh
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 605 (1288)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcCCCchH
Q 000777 606 KLVEDPEGAY 615 (1288)
Q Consensus 606 ~l~~~~~~~~ 615 (1288)
++.+.+...+
T Consensus 241 ~~~~~~~~~~ 250 (260)
T PRK10744 241 TIFTKPAKKQ 250 (260)
T ss_pred HHHhCCCcHH
Confidence 9876544333
No 267
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.7e-41 Score=388.09 Aligned_cols=214 Identities=29% Similarity=0.466 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999997654 4578999
Q ss_pred EEEccCCCCch-hhHHHHHhcCC-CCCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGK-GGDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~-~~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||||++.+|. .|++||+.+.. ....+.. ++.++++..++.+ ..++.+ .+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLEN-------KADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-------HhcCch----hhCCHHHHHHHHHHH
Confidence 99999999885 79999997521 1112222 3344455444432 334444 479999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||+.+|++|||||||++||+.+.+.+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 47899999999999976 999999999999999999999754
No 268
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.3e-41 Score=388.18 Aligned_cols=229 Identities=28% Similarity=0.431 Sum_probs=191.3
Q ss_pred cEEEEeEEEECCCCC----------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC
Q 000777 383 DIELRDVYFSYPARP----------NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE 452 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~----------~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~ 452 (1288)
-|+++|++++|+.+. ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996321 2468999999999999999999999999999999999999999999999999988
Q ss_pred CCHH---HHhcceEEEcCCC--CCC-chhHHHHHhcCC----CCCCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCC
Q 000777 453 FQLQ---WIRKKIGLVSQEP--VLF-TGSIKDNIAYGK----DDATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGT 521 (1288)
Q Consensus 453 ~~~~---~~r~~i~~v~Q~~--~l~-~~ti~~ni~~~~----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~ 521 (1288)
++.. .+|++|+||+|+| .++ ..||.|||.++. +..+.++..+.. .+.++.+ |++ ......+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHc--CCChHHhcCCcc
Confidence 7754 3577899999998 466 579999997642 122333322211 2333443 442 24567778
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 522 QLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKI 598 (1288)
Q Consensus 522 ~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i 598 (1288)
+|||||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998864 6899999999999976 999999999999
Q ss_pred eEecChhHHhcCCCchHHHH
Q 000777 599 VEKGTHSKLVEDPEGAYSQL 618 (1288)
Q Consensus 599 ~~~g~~~~l~~~~~~~~~~~ 618 (1288)
++.|+++++.+++...|.+.
T Consensus 241 ve~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred EEEcCHHHHHcCCCCHHHHH
Confidence 99999999998766677653
No 269
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=382.00 Aligned_cols=222 Identities=27% Similarity=0.423 Sum_probs=190.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 4999999999963 3699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCCCch-hhHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+|+||++.++. .|++||+.++... ...++++.++++.+++.+++.. ...+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHR-----------LVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCCHHHHHHH
Confidence 99999987665 4999999865210 1123456777777777554332 2357999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999999998753 7899999999999865 9999999999999999999987
Q ss_pred cCCCcHHHHHH
Q 000777 1269 NIPDGFYASLI 1279 (1288)
Q Consensus 1269 ~~~~g~y~~L~ 1279 (1288)
+. ..+.+++
T Consensus 237 ~~--~~~~~~~ 245 (265)
T PRK10575 237 RG--ETLEQIY 245 (265)
T ss_pred CH--HHHHHHh
Confidence 53 3344443
No 270
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-41 Score=377.08 Aligned_cols=220 Identities=30% Similarity=0.506 Sum_probs=189.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD-----AGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~~ 1114 (1288)
.|+++||+++|++ +++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 4899999999963 36999999999999999999999999999999999999997 6999999999864 345
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDA-T----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|+.++||||++.+|+.|++||+.++.. ... . ++.+.++++..++.+.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678999999999999999999999987521 011 1 233455566666654432 234566789999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999876 899999999999999999999
Q ss_pred hcCC
Q 000777 1268 INIP 1271 (1288)
Q Consensus 1268 l~~~ 1271 (1288)
...+
T Consensus 234 ~~~~ 237 (251)
T PRK14249 234 FSRP 237 (251)
T ss_pred HhCC
Confidence 7653
No 271
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.1e-41 Score=396.01 Aligned_cols=214 Identities=26% Similarity=0.484 Sum_probs=187.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.++..++...++++|
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 489999999996 35799999999999999999999999999999999999999999999999999998888889999
Q ss_pred EEEcCCCCC-CchhHHHHHhcCCCCC-------C---HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000777 463 GLVSQEPVL-FTGSIKDNIAYGKDDA-------T---TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 463 ~~v~Q~~~l-~~~ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 531 (1288)
+||+|++.+ |+.|++||+.++.... . .+++.++++.. |+.........+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~v-----------gl~~~~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERT-----------GVAQFADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHH
Confidence 999999987 5789999999874211 1 12233444444 344344556679999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
+|||||+++|++|||||||++||+.++..+++.|+++. +++|+|++||+++.+.. |||+++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999886 46899999999999965 99999999999999999999886
Q ss_pred C
Q 000777 610 D 610 (1288)
Q Consensus 610 ~ 610 (1288)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 4
No 272
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-41 Score=379.15 Aligned_cols=223 Identities=29% Similarity=0.471 Sum_probs=191.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeecc--CCCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQ--KLQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~--~i~~ 1114 (1288)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++. |++|+|.+||.++. ..+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 369999999999999999999999999999999999986 47999999999985 3456
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCCC-CC---CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKGG-DA---TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQR 1190 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~~---sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQr 1190 (1288)
..+|++++|++|++.+|+.|++||+.++... .. .++++.++++.+++.+++.. ..+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875211 11 23445666777777655432 2345677899999999
Q ss_pred HHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEe---------CCEEEE
Q 000777 1191 VAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVK---------NGVIVE 1260 (1288)
Q Consensus 1191 laiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~---------~G~Ive 1260 (1288)
++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||||++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999865 99999998 899999
Q ss_pred ecChhhhhcCCCcH
Q 000777 1261 KGKHENLINIPDGF 1274 (1288)
Q Consensus 1261 ~Gt~~eLl~~~~g~ 1274 (1288)
.|+++++.+.+...
T Consensus 240 ~~~~~~~~~~~~~~ 253 (264)
T PRK14243 240 FDRTEKIFNSPQQQ 253 (264)
T ss_pred eCCHHHHHhCCCcH
Confidence 99999998764433
No 273
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.3e-41 Score=374.71 Aligned_cols=217 Identities=25% Similarity=0.460 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH-Hhcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW-LRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1121 (1288)
|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .|+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 36999999999999999999999999999999999999999999999999998777655 45789
Q ss_pred EEEccCCCCchh-hHHHHHhcCCC-CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcC
Q 000777 1122 GLVSQEPVLFND-TIRANIAYGKG-GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVK 1199 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~g-TIreNl~~g~~-~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr 1199 (1288)
+|+||++.+|.+ |++||+.++.. .....++..+ .+.+.+..+ |++.........||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 99999986421 1112222111 122233332 44444556677899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhc
Q 000777 1200 DPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1200 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 47899999999987765 99999999999999999999875
No 274
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.7e-41 Score=379.54 Aligned_cols=227 Identities=30% Similarity=0.444 Sum_probs=187.2
Q ss_pred EEEEEEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH-
Q 000777 1043 IELHHVSFKYPSR------PDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK- 1115 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~- 1115 (1288)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 134799999999999999999999999999999999999999999999999999877654
Q ss_pred --HHhcceEEEccCCC--Cc-hhhHHHHHhcCCC--CC----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1116 --WLRQQMGLVSQEPV--LF-NDTIRANIAYGKG--GD----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1116 --~lR~~i~~V~Qd~~--Lf-~gTIreNl~~g~~--~~----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
.+|++|+|+||+|. ++ ..|++||+.+... .. ..++++.++++..++.+ ...+..+..||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 36788999999983 44 4799999964210 01 12234555555555431 22345567899
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEe
Q 000777 1185 GGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEK 1261 (1288)
Q Consensus 1185 gGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~ 1261 (1288)
||||||++|||||+.+|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999975 999999999999999
Q ss_pred cChhhhhcCCCcHHHHHH
Q 000777 1262 GKHENLINIPDGFYASLI 1279 (1288)
Q Consensus 1262 Gt~~eLl~~~~g~y~~L~ 1279 (1288)
|++++++..+...+.++.
T Consensus 233 g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 233 CDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred CCHHHHcCCCCHHHHHHH
Confidence 999999975333444443
No 275
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.9e-41 Score=372.85 Aligned_cols=217 Identities=26% Similarity=0.472 Sum_probs=181.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH-hcce
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI-RKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 462 (1288)
|+++||+++|+. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 478999999963 469999999999999999999999999999999999999999999999999987776544 6789
Q ss_pred EEEcCCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 463 GLVSQEPVLFTG-SIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 463 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
+|+||++.+|.. |++||+.++.......+... + +.+.++.++ +++......+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~--~---~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA--R---LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH--H---HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999998875 99999988643221111111 1 112222221 2334455677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999876 46899999999999866 99999999999999999887753
No 276
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-41 Score=375.12 Aligned_cols=220 Identities=33% Similarity=0.543 Sum_probs=185.0
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WIR 459 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r 459 (1288)
|+++|++++|+.+. .+++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999996321 12699999999999999999999999999999999999999999999999999876543 347
Q ss_pred cceEEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 460 KKIGLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
+.++|+||++.+|. .|++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE-----ERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 78999999999986 6999999875321 1111111 1223445555 66666667778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
++.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFAN 231 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999998753 6899999999999876 999999999999999998887653
No 277
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.6e-41 Score=368.12 Aligned_cols=200 Identities=31% Similarity=0.529 Sum_probs=173.6
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEE
Q 000777 1044 ELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGL 1123 (1288)
Q Consensus 1044 ~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1123 (1288)
+++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ..+|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 469999999999999999999999999999999999999999999999998854 457789999
Q ss_pred EccCC--CCchhhHHHHHhcCCCC-CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1124 VSQEP--VLFNDTIRANIAYGKGG-DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1124 V~Qd~--~Lf~gTIreNl~~g~~~-~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
+||+| .+|..|++||+.++... ...++++.++++..++.++..+ ....||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhC
Confidence 99998 46789999999875221 1234567888888887665433 3347999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEE
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIV 1259 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv 1259 (1288)
|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 57899999999999975 9999999999985
No 278
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-41 Score=377.34 Aligned_cols=221 Identities=32% Similarity=0.553 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC---HHHHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ---LQWIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~r~ 460 (1288)
++++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468999999963 246999999999999999999999999999999999999999999999999998766 456778
Q ss_pred ceEEEcCCCCCCc-hhHHHHHhcCCCCCCH--HHH---HHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 461 KIGLVSQEPVLFT-GSIKDNIAYGKDDATT--EEI---RVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~--~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
.++|+||++.+|. .|++||+.++...... ... ........+.+.++.+ |+.......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999998886 6999999875321100 000 0000011123344454 565566778889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
|||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 999999999999999999999999999999998753 6899999999999985 9999999999999999988863
No 279
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-41 Score=376.20 Aligned_cols=218 Identities=34% Similarity=0.568 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++||+++|++. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999631 46999999999999999999999999999999999999999999999999998877777788999
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccc--cccCCCCCCChHHHHHHHHHHHhc
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDT--LVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
|++|++.+|. .|++||+.++... ...++. ...+.+.++.+ |+.. ...+.+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999885 6999999875321 111111 11223445555 5553 566778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998853 6899999999998765 999999999999999999988654
No 280
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-41 Score=379.26 Aligned_cols=222 Identities=27% Similarity=0.459 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1114 (1288)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 369999999999999999999999999999999999987 699999999999853 455
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CCCCH-----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDATE-----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~sd-----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|++||+.++.. ...++ +.+.++++..++.+ ++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 11221 22344444444332 222334566789999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hcCCCc
Q 000777 1268 INIPDG 1273 (1288)
Q Consensus 1268 l~~~~g 1273 (1288)
.+++..
T Consensus 254 ~~~~~~ 259 (271)
T PRK14238 254 FSNPSD 259 (271)
T ss_pred HcCCCC
Confidence 876443
No 281
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=395.01 Aligned_cols=221 Identities=32% Similarity=0.516 Sum_probs=189.6
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcc
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQ 1120 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1120 (1288)
..|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|++||.++.+.+. .|++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 369999999999999999999999999999999999999999999999999987664 5789
Q ss_pred eEEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1121 MGLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
++||+|++.+|. .|++|||.|+.. ...+ .+++.++++..++.++. .....+||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHH
Confidence 999999999996 599999998632 1122 23455666666665443 334458999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1271 (1288)
|||+++|++||||||||+||+.+...+.+.|++.. .+.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998887764 36899999999998754 9999999999999999999999887
Q ss_pred CcHHHH
Q 000777 1272 DGFYAS 1277 (1288)
Q Consensus 1272 ~g~y~~ 1277 (1288)
...|..
T Consensus 242 ~~~~~a 247 (377)
T PRK11607 242 TTRYSA 247 (377)
T ss_pred ccHHHH
Confidence 665543
No 282
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.7e-41 Score=363.87 Aligned_cols=203 Identities=34% Similarity=0.602 Sum_probs=179.4
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
+.++++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999632 2469999999999999999999999999999999999999999999999999988887788889
Q ss_pred eEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 462 IGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 462 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
|+||+|+|.+|++|++||+.+... ...+++.++++ +++++.+||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999986532 23333222221 34567899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecCh
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 604 (1288)
+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999988778899999999999877999999999999988763
No 283
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=394.20 Aligned_cols=207 Identities=35% Similarity=0.532 Sum_probs=178.5
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHH----hcceEEEccCCCCch-h
Q 000777 1059 QVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWL----RQQMGLVSQEPVLFN-D 1133 (1288)
Q Consensus 1059 ~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~V~Qd~~Lf~-g 1133 (1288)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|++||.|+.+.+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 48999999999999999999999999999999999999999999999999988876554 468999999999996 5
Q ss_pred hHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEec
Q 000777 1134 TIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDE 1208 (1288)
Q Consensus 1134 TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDE 1208 (1288)
|++||+.++.. ...+ ++++.++++..++.++..+ ...+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~-----------~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS-----------YPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhc-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987521 0112 3456667777777655433 345899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcHHH
Q 000777 1209 ATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGFYA 1276 (1288)
Q Consensus 1209 aTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~y~ 1276 (1288)
|||+||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v 261 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYV 261 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHH
Confidence 999999999999999999874 47899999999999865 999999999999999999999876544443
No 284
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-41 Score=348.30 Aligned_cols=220 Identities=26% Similarity=0.448 Sum_probs=192.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 461 (1288)
-++++|++..|+ ..++|+||||++++||+++|+|+||+|||||+++|+|+.+|.+|+|.++|+|++..+++. .|..
T Consensus 3 mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 478999999996 357999999999999999999999999999999999999999999999999999998776 5789
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|+||||.-.+|. .||+||+.+|.....+++. .....++..+-+| -+....+.++.+|||||||.+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999995 5999999987433222111 1111334455667 477778889999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|++|+|||||.+|-|.-.+.|.+.|+++.+ +.||++|-++...... |||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999985 4599999999998765 999999999999999999999876
No 285
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=377.01 Aligned_cols=229 Identities=26% Similarity=0.434 Sum_probs=193.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1114 (1288)
-|+++||+++|++ +++|+|+||+|++||.+||+||||||||||+++|+|+.+| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3699999999999999999999999999999999999763 489999999999776 45
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCCC-C-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKGG-D-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
...|+.++|+||++.+|+.|++||+.++... . ..++++.++++.+++.+.+ .+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEV-------KDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhh-------HHHhhcChhhCCHHHH
Confidence 6778899999999999999999999875210 1 1123455666666654332 2335566789999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++||||++.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999965 999999999999999999999
Q ss_pred hcCCCcHHHHHHH
Q 000777 1268 INIPDGFYASLIA 1280 (1288)
Q Consensus 1268 l~~~~g~y~~L~~ 1280 (1288)
.+++...+.+.+-
T Consensus 236 ~~~~~~~~~~~~~ 248 (253)
T PRK14261 236 FENPHEELTENYI 248 (253)
T ss_pred HhCCCcHHHHHHh
Confidence 8765445555443
No 286
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.5e-41 Score=357.67 Aligned_cols=178 Identities=40% Similarity=0.718 Sum_probs=166.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999998776 667889999
Q ss_pred EEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCC
Q 000777 1123 LVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPK 1202 (1288)
Q Consensus 1123 ~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ 1202 (1288)
|+||+|.+|+.|++||+ ...||||||||++||||++++|+
T Consensus 79 ~~~q~~~~~~~tv~~~i----------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL----------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEccCCeeecccHHHhh----------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999997 45799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 000777 1203 ILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1203 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G 1262 (1288)
+|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999887789999999999999889999999999999865
No 287
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3e-41 Score=388.89 Aligned_cols=230 Identities=27% Similarity=0.417 Sum_probs=189.2
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC---CceEEECCeeccCCCHHHH
Q 000777 1042 EIELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD---AGHITLDGVEIQKLQLKWL 1117 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~---~G~I~idG~di~~i~~~~l 1117 (1288)
-++++||++.|+... ..++|+||||+|++||++||||+||||||||+++|+|+++|+ +|+|.+||.|+..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996421 246999999999999999999999999999999999999996 9999999999998887665
Q ss_pred h----cceEEEccCC--CCch-hhHHHHHhcCC--CCCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1118 R----QQMGLVSQEP--VLFN-DTIRANIAYGK--GGDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1118 R----~~i~~V~Qd~--~Lf~-gTIreNl~~g~--~~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
| ++|+||||+| .++. .|+.+|+.... ....+.+ ++.++++.+++ |++. ..++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChH-HHhcCCcccCC
Confidence 3 4799999998 3443 46777664210 1112322 34445555444 3322 22566788999
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEe
Q 000777 1185 GGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEK 1261 (1288)
Q Consensus 1185 gGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~ 1261 (1288)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 7899999999999975 999999999999999
Q ss_pred cChhhhhcCCCcHHHHHH
Q 000777 1262 GKHENLINIPDGFYASLI 1279 (1288)
Q Consensus 1262 Gt~~eLl~~~~g~y~~L~ 1279 (1288)
|+++++++++...|.+.+
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999988777777744
No 288
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=385.31 Aligned_cols=220 Identities=29% Similarity=0.500 Sum_probs=183.9
Q ss_pred EEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC---------
Q 000777 384 IELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE--------- 452 (1288)
Q Consensus 384 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~--------- 452 (1288)
|+++|++++|+... +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999996421 2369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHHhcceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCcc
Q 000777 453 ---------------FQLQWIRKKIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGID 513 (1288)
Q Consensus 453 ---------------~~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~ 513 (1288)
.+...++++||||||+| .+|..||+|||.|+... ...++..+. +.+.++.+ |++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELV--GLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCC
Confidence 13456788999999986 67888999999987432 222222211 12334444 554
Q ss_pred -ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEE
Q 000777 514 -TLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMI 590 (1288)
Q Consensus 514 -t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i 590 (1288)
......+.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||||
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 346677889999999999999999999999999999999999999999999988754 7899999999998865 9999
Q ss_pred EEEeCCEEeEecChhHHhcC
Q 000777 591 AVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 591 ~~l~~G~i~~~g~~~~l~~~ 610 (1288)
++|++|++++.|+++++..+
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999998765
No 289
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=378.81 Aligned_cols=222 Identities=31% Similarity=0.479 Sum_probs=190.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1114 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 7 AIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred eEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 5999999999963 3699999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-----CCCC-HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-----GDAT-EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-----~~~s-d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|+.|++||+.++.. ++.. ++.+.++++.+++.+++.. ..+..+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 678899999999999999999999976411 1111 2345677777777655432 23455678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEe-----CCEEEEec
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVK-----NGVIVEKG 1262 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~-----~G~Ive~G 1262 (1288)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999998777899999999999865 99999998 59999999
Q ss_pred ChhhhhcCCCc
Q 000777 1263 KHENLINIPDG 1273 (1288)
Q Consensus 1263 t~~eLl~~~~g 1273 (1288)
+++++.+.+..
T Consensus 237 ~~~~~~~~~~~ 247 (259)
T PRK14260 237 VTTQIFSNPLD 247 (259)
T ss_pred CHHHHhcCCCC
Confidence 99999875443
No 290
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.4e-41 Score=374.82 Aligned_cols=213 Identities=24% Similarity=0.439 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH-Hhcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW-LRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1121 (1288)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 36999999999999999999999999999999999999999999999999998877654 45679
Q ss_pred EEEccCCCCchh-hHHHHHhcCCCCC-------------CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1122 GLVSQEPVLFND-TIRANIAYGKGGD-------------ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~g-TIreNl~~g~~~~-------------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
+|+||++.+|.+ |++||+.++.... ..++++.++++..+ ++.........|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIG-----------LADEADRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHH
Confidence 999999999986 9999998742110 01223344444443 3434455667899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhh
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHEN 1266 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1266 (1288)
|||++||||++++|++|||||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999975 99999999999999999999
Q ss_pred hhc
Q 000777 1267 LIN 1269 (1288)
Q Consensus 1267 Ll~ 1269 (1288)
+..
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 875
No 291
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.4e-41 Score=372.64 Aligned_cols=205 Identities=37% Similarity=0.517 Sum_probs=173.3
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH----HH
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK----WL 1117 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~----~l 1117 (1288)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 14699999999999999999999999999999999999999999999999999877643 24
Q ss_pred hcceEEEccCCCCchh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1118 RQQMGLVSQEPVLFND-TIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1118 R~~i~~V~Qd~~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
|++++|+||++.+|.+ |++||+.++.. .... ++++.++++..++.++ ......+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHHH
Confidence 6789999999999976 99999987421 1111 2345555555555433 3445568999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVI 1258 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1258 (1288)
+|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998764 7899999999999888999999999974
No 292
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.8e-41 Score=372.43 Aligned_cols=215 Identities=23% Similarity=0.471 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++||++.|+.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 4789999999632 256999999999999999999999999999999999999999999999999986543 55677899
Q ss_pred EEcCCCCCC-chhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLF-TGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|++|++.++ ..|++||+.++.. ....++..+ .+.+.++.+ |+.........+||||||||++||||++.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 999999988 5799999987421 111111111 122334443 444444556679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999998777899999999999876 999999999999999988775
No 293
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.5e-41 Score=374.91 Aligned_cols=214 Identities=32% Similarity=0.502 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC--CHHHHhcc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL--QLKWLRQQ 1120 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i--~~~~lR~~ 1120 (1288)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3699999999999999999999999999999999999999999999999999764 34567889
Q ss_pred eEEEccCCCCch-hhHHHHHhcCCC--CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1121 MGLVSQEPVLFN-DTIRANIAYGKG--GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
++|+||++.+|. .|++||+.++.. ...+.+ ++.++++..+ ++.........||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVG-----------LAERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChHHHhcChhhcCHHHHHHHHH
Confidence 999999998885 699999987521 112222 2334444443 4444445567899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||++++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999965 999999999999999999999865
No 294
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.5e-41 Score=376.63 Aligned_cols=216 Identities=33% Similarity=0.509 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC--------H
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ--------L 1114 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------~ 1114 (1288)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999963 36999999999999999999999999999999999999999999999999986542 3
Q ss_pred HHHhcceEEEccCCCCch-hhHHHHHhcCCC--CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1115 KWLRQQMGLVSQEPVLFN-DTIRANIAYGKG--GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
..+|++++||||++.+|. .|++||+.++.. .....+ .+.++++..++ +........+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGL-----------AGKETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------cchhhCChhhCChHH
Confidence 567889999999998885 799999976310 112222 23334444333 333445677899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
|||++|||||+.+|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 47899999999999965 9999999999999999999
Q ss_pred hhhcCCC
Q 000777 1266 NLINIPD 1272 (1288)
Q Consensus 1266 eLl~~~~ 1272 (1288)
++.+.+.
T Consensus 230 ~~~~~~~ 236 (250)
T PRK11264 230 ALFADPQ 236 (250)
T ss_pred HHhcCCC
Confidence 9986543
No 295
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=375.91 Aligned_cols=221 Identities=33% Similarity=0.471 Sum_probs=189.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1114 (1288)
.|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 4899999999963 3699999999999999999999999999999999999875 799999999999653 34
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCCC-CC-C----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKGG-DA-T----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|++||+.++... .. + ++++.++++.+++.+.+.. ........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 5678999999999999999999999865211 11 1 2345667777776543322 23456678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999866 999999999999999999999
Q ss_pred hcCCC
Q 000777 1268 INIPD 1272 (1288)
Q Consensus 1268 l~~~~ 1272 (1288)
...+.
T Consensus 234 ~~~~~ 238 (251)
T PRK14270 234 FLEPQ 238 (251)
T ss_pred hcCCC
Confidence 86543
No 296
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.8e-41 Score=367.29 Aligned_cols=204 Identities=26% Similarity=0.454 Sum_probs=179.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEccCCCCc-hhhHHHHHhcCCC-CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1123 LVSQEPVLF-NDTIRANIAYGKG-GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1123 ~V~Qd~~Lf-~gTIreNl~~g~~-~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
||||++.+| +.|++||+.++.. ...+++++.++++..++.+... .....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcC
Confidence 999999877 5799999976421 1235667888888888766543 23457999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999875 47899999999999865 9999999999999875
No 297
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.7e-41 Score=371.33 Aligned_cols=203 Identities=30% Similarity=0.538 Sum_probs=171.0
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r~ 460 (1288)
++++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 24699999999999999999999999999999999999999999999999998766543 3678
Q ss_pred ceEEEcCCCCCCc-hhHHHHHhcCCCC--CC----HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 461 KIGLVSQEPVLFT-GSIKDNIAYGKDD--AT----TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
+++|++|++.+|. .|++||+.++... .. .+++.++ ++.+ |+.........+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~---------l~~~--~l~~~~~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAA---------LEKV--GLEGKAHALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHH---------HHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 9999999999886 5999999875221 11 1223333 3333 44444555667999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKI 598 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i 598 (1288)
||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999999998754 6899999999999976 999999999975
No 298
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-41 Score=375.37 Aligned_cols=225 Identities=32% Similarity=0.525 Sum_probs=193.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1114 (1288)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|++||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 369999999999999999999999999999999999874 489999999999865 346
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CC-CC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GD-AT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~-~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|++||+.++.. .. .+ ++++.++++.+++.+++..+ ++..+..||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHH
Confidence 678999999999999999999999986421 11 11 23466677888887665432 3455778999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999876 899999999999999999999
Q ss_pred hcCCCcHHH
Q 000777 1268 INIPDGFYA 1276 (1288)
Q Consensus 1268 l~~~~g~y~ 1276 (1288)
...+.+.|.
T Consensus 233 ~~~~~~~~~ 241 (250)
T PRK14266 233 FINPKDKRT 241 (250)
T ss_pred HhCCCChHH
Confidence 876566554
No 299
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-41 Score=379.89 Aligned_cols=217 Identities=29% Similarity=0.476 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++. .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999743 24699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCC--CchhhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEPV--LFNDTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~~--Lf~gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
+|+||+|. ++..|+++|+.++... ... ++++.++++..++.++. .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHH
Confidence 99999984 5567899999875211 112 23455666666654432 344568999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 6899999999999988999999999999999999999775
No 300
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=361.52 Aligned_cols=224 Identities=34% Similarity=0.580 Sum_probs=193.8
Q ss_pred cEEEEeEEEECCCCCC---------------------CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCc
Q 000777 383 DIELRDVYFSYPARPN---------------------EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAG 441 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~---------------------~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 441 (1288)
.|+++||++-|+.++. ..-++|+||+|+.||+..|.|=||||||||++++.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5899999998864321 1237899999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHh----cceEEEcCCCCCC-chhHHHHHhcCCCCC--C----HHHHHHHHHHcCHHHHHHhCCC
Q 000777 442 EVLIDGINLKEFQLQWIR----KKIGLVSQEPVLF-TGSIKDNIAYGKDDA--T----TEEIRVATELANAAKFIDKLPQ 510 (1288)
Q Consensus 442 ~i~~~g~~~~~~~~~~~r----~~i~~v~Q~~~l~-~~ti~~ni~~~~~~~--~----~~~~~~~~~~~~~~~~i~~l~~ 510 (1288)
+|+++|.|+..++.++|| +++++|||+..|+ +.||.||..||.+-. . .++..++++.+++++|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 999999999999877653 6899999999988 569999999996522 2 234455666676666655555
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-c
Q 000777 511 GIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-A 587 (1288)
Q Consensus 511 g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~ 587 (1288)
.+||||+||||.|||||..+|+||++|||+|||||--+..+|+.|.++.+ .||+|+|||++++.-+ .
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 59999999999999999999999999999999999999999999987754 5899999999999755 9
Q ss_pred CEEEEEeCCEEeEecChhHHhcCCCchHHH
Q 000777 588 DMIAVIHRGKIVEKGTHSKLVEDPEGAYSQ 617 (1288)
Q Consensus 588 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 617 (1288)
|||..|++|+|++.|+|+|++.+|...|-.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 999999999999999999999988776654
No 301
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-41 Score=379.88 Aligned_cols=215 Identities=31% Similarity=0.544 Sum_probs=185.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC-HHHHhcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ-LKWLRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~lR~~i 1121 (1288)
++++||+++|++ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 236999999999999999999999999999999999999999999999999998765 46788899
Q ss_pred EEEccCCC--CchhhHHHHHhcCCCC-CCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHH
Q 000777 1122 GLVSQEPV--LFNDTIRANIAYGKGG-DAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIA 1194 (1288)
Q Consensus 1122 ~~V~Qd~~--Lf~gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1194 (1288)
+|+||+|. +++.|++||+.++... ..+ ++++.++++..++.++ ....+..||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKY-----------RHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCCcccCCHHHHHHHHHH
Confidence 99999985 6778999999875211 122 2344555555555443 3344568999999999999
Q ss_pred HHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhhcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1195 RAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1195 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||+.+|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998865 47899999999999988999999999999999999998764
No 302
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-41 Score=378.32 Aligned_cols=222 Identities=33% Similarity=0.530 Sum_probs=186.3
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCC--C
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKE--F 453 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~ 453 (1288)
.+.|+++||+++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 357999999999962 4699999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcceEEEcCCCCCCchhHHHHHhcCCC--CC--CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCCh
Q 000777 454 QLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKD--DA--TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSG 525 (1288)
Q Consensus 454 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 525 (1288)
+...+|+.++|++|++.+|..|++||+.++.. .. .. +++.++++..++.+.+ ....+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCH
Confidence 45567889999999999998899999987531 11 11 2223333333332211 2245667789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecCh
Q 000777 526 GQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 526 Gqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 604 (1288)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999966 999999999999999999
Q ss_pred hHHhcCCC
Q 000777 605 SKLVEDPE 612 (1288)
Q Consensus 605 ~~l~~~~~ 612 (1288)
+++..++.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99876533
No 303
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-41 Score=394.18 Aligned_cols=221 Identities=29% Similarity=0.488 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999876543 4689
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+||+|++.+|. .||+|||.|+... ...++..+ .+.+.++.+ |++........+|||||||||+|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999995 5999999987431 12221111 122334444 55555666778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchH
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAY 615 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 615 (1288)
+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++...+...+
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 9999999999999999999999999988754 6899999999998865 99999999999999999999987655433
No 304
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-41 Score=377.47 Aligned_cols=222 Identities=27% Similarity=0.442 Sum_probs=189.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccCCC-HH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQKLQ-LK 1115 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~-~~ 1115 (1288)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 3699999999999999999999999999999999999986 6999999999997663 45
Q ss_pred HHhcceEEEccCCCCchhhHHHHHhcCCC--CCCCHHHH----HHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1116 WLRQQMGLVSQEPVLFNDTIRANIAYGKG--GDATEAEI----QAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~--~~~sd~ei----~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
.+|++++|+||++.+|+.|+++|+.++.. ...+++++ .++++..++.+.+ ++.+...+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986421 11344443 2334444443322 23345667899999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999865 9999999999999999999998
Q ss_pred cCCCc
Q 000777 1269 NIPDG 1273 (1288)
Q Consensus 1269 ~~~~g 1273 (1288)
+.+..
T Consensus 251 ~~~~~ 255 (276)
T PRK14271 251 SSPKH 255 (276)
T ss_pred hCcCc
Confidence 76443
No 305
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3e-41 Score=373.13 Aligned_cols=213 Identities=29% Similarity=0.466 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH-Hhcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW-LRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1121 (1288)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 36999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEccCCCCchh-hHHHHHhcCCCC-CCCHHH-HHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1122 GLVSQEPVLFND-TIRANIAYGKGG-DATEAE-IQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~g-TIreNl~~g~~~-~~sd~e-i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
+|+||++.+|.. |++||+.++... ...+++ ..++++.. ++++.........||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~----------~~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELF----------PVLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHH----------HhHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999976 999999865211 111121 22222222 12333345566789999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998764 7899999999999986 9999999999999999999983
No 306
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.5e-41 Score=370.38 Aligned_cols=206 Identities=32% Similarity=0.501 Sum_probs=173.4
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH---Hh
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW---LR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1118 (1288)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999999999999998876544 34
Q ss_pred -cceEEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1119 -QQMGLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1119 -~~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
++++|+||++.+|. .|++||+.++.. .... ++++.++++..++. .........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-----------HRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHHH
Confidence 68999999999885 699999976311 0111 22344455544443 334445578999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEE
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIV 1259 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Iv 1259 (1288)
+|||||+++|+||||||||++||+++...+.+.|++..+ ++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999999999998753 78999999999999889999999999986
No 307
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-41 Score=380.80 Aligned_cols=222 Identities=32% Similarity=0.520 Sum_probs=181.9
Q ss_pred EEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH----hc
Q 000777 385 ELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI----RK 460 (1288)
Q Consensus 385 ~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----r~ 460 (1288)
.++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4568888885 3468999999999999999999999999999999999999999999999999987665442 46
Q ss_pred ceEEEcCCCCCC-chhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 461 KIGLVSQEPVLF-TGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 461 ~i~~v~Q~~~l~-~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
+++|++|++.+| ..|++||+.++... ....+..+ .+.+.++.+ |++..+.....+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 899999999988 46999999875321 11111111 112233333 444445556679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCch
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGA 614 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 614 (1288)
+++|+||||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.+...
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~ 255 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPAND 255 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcH
Confidence 999999999999999999999999999998753 6899999999999865 9999999999999999999998765444
Q ss_pred HH
Q 000777 615 YS 616 (1288)
Q Consensus 615 ~~ 616 (1288)
|.
T Consensus 256 ~~ 257 (269)
T cd03294 256 YV 257 (269)
T ss_pred HH
Confidence 43
No 308
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.6e-41 Score=369.15 Aligned_cols=204 Identities=34% Similarity=0.576 Sum_probs=174.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999964 3699999999999999999999999999999999999999999999999999766542 57899
Q ss_pred EEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|. .|++||+.++.. ...+ ++++.++++..++.++ .......||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999986411 1112 2344555666655444 334456899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999999876 9999999999999886
No 309
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-41 Score=376.86 Aligned_cols=222 Identities=27% Similarity=0.485 Sum_probs=191.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCCchh-hHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
|+||++.+|.+ |++||+.++... ...++++.++++..++.++ .......||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHHHHH
Confidence 99999998876 999999875210 1123345666666666543 23445689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||||++++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 9999999999999999999999999999999999875 47899999999999865 999999999999999999998753
Q ss_pred CCcHHHHHHH
Q 000777 1271 PDGFYASLIA 1280 (1288)
Q Consensus 1271 ~~g~y~~L~~ 1280 (1288)
..+.+++.
T Consensus 229 --~~~~~~~~ 236 (255)
T PRK11231 229 --GLLRTVFD 236 (255)
T ss_pred --HHHHHHhC
Confidence 44555553
No 310
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-41 Score=379.81 Aligned_cols=216 Identities=31% Similarity=0.553 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++||+++|+.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999632 35699999999999999999999999999999999999999999999999999887777778899
Q ss_pred EEEcCCC--CCCchhHHHHHhcCCCC--CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 463 GLVSQEP--VLFTGSIKDNIAYGKDD--ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 463 ~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+|++|+| .+++.|++|||.++... ... +++.++++..+ ++..+.....+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVG-----------MEDFLNREPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcC-----------ChhhhhCCcccCCHHHHHHHHHH
Confidence 9999998 46678999999986322 122 22333344434 44444555679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998864 6899999999999888999999999999999999988764
No 311
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=392.26 Aligned_cols=223 Identities=32% Similarity=0.541 Sum_probs=188.3
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
..|+++|++++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.++ .++.
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 4599999999996 2469999999999999999999999999999999999999999999999999987654 4678
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
||||+|++.+|. .||+|||.|+... .+..+..+ .+.+.++.+ |+.........+|||||||||+|||||+
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~ 165 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLA 165 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 999999999996 5999999987431 22222211 122333444 5555566677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchH
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAY 615 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 615 (1288)
.+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 166 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~ 245 (377)
T PRK11607 166 KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 245 (377)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHH
Confidence 99999999999999999999999988877643 6899999999999865 99999999999999999999998766544
Q ss_pred H
Q 000777 616 S 616 (1288)
Q Consensus 616 ~ 616 (1288)
.
T Consensus 246 ~ 246 (377)
T PRK11607 246 S 246 (377)
T ss_pred H
Confidence 3
No 312
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-41 Score=373.94 Aligned_cols=214 Identities=30% Similarity=0.468 Sum_probs=180.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeecc------CCCHHH
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQ------KLQLKW 1116 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~------~i~~~~ 1116 (1288)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 36999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcceEEEccCCCCchh-hHHHHHhcCCC--CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1117 LRQQMGLVSQEPVLFND-TIRANIAYGKG--GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1117 lR~~i~~V~Qd~~Lf~g-TIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
+|++++|+||++.+|.+ |++||+.++.. ..... +++.++++..++ +..+.....+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRL-----------KPYADRFPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHH
Confidence 78899999999999874 99999964210 01122 233344444444 33344555789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|++||||++++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999875 47899999999999965 999999999999999999998
Q ss_pred hcC
Q 000777 1268 INI 1270 (1288)
Q Consensus 1268 l~~ 1270 (1288)
.+.
T Consensus 229 ~~~ 231 (242)
T PRK11124 229 TQP 231 (242)
T ss_pred cCc
Confidence 654
No 313
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.7e-41 Score=375.03 Aligned_cols=220 Identities=30% Similarity=0.526 Sum_probs=182.4
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH---HHHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL---QWIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r~ 460 (1288)
|+++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999951 3569999999999999999999999999999999999999999999999999877654 34678
Q ss_pred ceEEEcCCCCCCc-hhHHHHHhcCCCCCCH--HHH---HHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 461 KIGLVSQEPVLFT-GSIKDNIAYGKDDATT--EEI---RVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~--~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+++|+||++.+|. .|++||+.++...... ... ........+.+.++.+ |++......+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 8999999998886 6999999876421100 000 0000011223344554 566666777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999999999999999999999998753 6899999999999865 999999999999999998886
No 314
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-41 Score=369.23 Aligned_cols=207 Identities=36% Similarity=0.607 Sum_probs=174.3
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999876543 457899
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|+||++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 6999999875321 11111111 122344444 555556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999998753 6899999999999866 9999999999998765
No 315
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=381.80 Aligned_cols=218 Identities=32% Similarity=0.553 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC----CHHH
Q 000777 1043 IELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL----QLKW 1116 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1116 (1288)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999998764 4567
Q ss_pred HhcceEEEccCC--CCchhhHHHHHhcCCC-CCCCHHH----HHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1117 LRQQMGLVSQEP--VLFNDTIRANIAYGKG-GDATEAE----IQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1117 lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
+|++|+|+||+| .+|+.|++||+.++.. ...+.++ +.++++..++.+ .........|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 889999999998 6888999999986421 1123333 233344444421 1234556789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999875 37899999999999865 999999999999999999998
Q ss_pred hcC
Q 000777 1268 INI 1270 (1288)
Q Consensus 1268 l~~ 1270 (1288)
++.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 316
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=378.88 Aligned_cols=222 Identities=30% Similarity=0.510 Sum_probs=189.9
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CC
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQ 1113 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1113 (1288)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35999999999963 369999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEccCCCCchhhHHHHHhcCCC----CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1114 LKWLRQQMGLVSQEPVLFNDTIRANIAYGKG----GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~----~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
...+|++++||||++.+|..|++||+.++.. ....+++++++++..++...+.. ..+....+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 5678899999999999998999999986411 11124567777777776544321 234566789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEE-EEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIA-VVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~-vl~~G~Ive~Gt~~eL 1267 (1288)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5799999999999999
Q ss_pred hcCCC
Q 000777 1268 INIPD 1272 (1288)
Q Consensus 1268 l~~~~ 1272 (1288)
.+++.
T Consensus 268 ~~~~~ 272 (285)
T PRK14254 268 FENPE 272 (285)
T ss_pred HhCcC
Confidence 86533
No 317
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-41 Score=380.58 Aligned_cols=226 Identities=29% Similarity=0.467 Sum_probs=190.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~~ 1114 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999963 359999999999999999999999999999999999864 4999999999998643 33
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDA-T----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++||||++.+|..|++||+.++.. ... + ++++.++++..++.+.+. .........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHHH
Confidence 467899999999999998999999987521 011 1 234556666666543322 123455678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999999
Q ss_pred hcCCCcHHHH
Q 000777 1268 INIPDGFYAS 1277 (1288)
Q Consensus 1268 l~~~~g~y~~ 1277 (1288)
.+++...|.+
T Consensus 269 ~~~~~~~~~~ 278 (286)
T PRK14275 269 FTNPKDRMTE 278 (286)
T ss_pred HhCCCcHHHH
Confidence 8765544443
No 318
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-41 Score=382.06 Aligned_cols=221 Identities=29% Similarity=0.497 Sum_probs=183.3
Q ss_pred CccEEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccC----C-
Q 000777 1040 KGEIELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQK----L- 1112 (1288)
Q Consensus 1040 ~g~I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i- 1112 (1288)
.+.|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35799999999997432 1359999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHHhcceEEEccCC--CCchhhHHHHHhcCCC-CCCCHHHH----HHHHHHhchhHHHHhhhccccccccCCCCCCCh
Q 000777 1113 QLKWLRQQMGLVSQEP--VLFNDTIRANIAYGKG-GDATEAEI----QAASEMANAHKFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1113 ~~~~lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~ei----~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
+...+|++|+|+||+| .+|..|++||+.++.. .....++. .++++..++ |. ...+.....|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~---~~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PE---DYVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Ch---hHhcCChhhCCH
Confidence 4567889999999998 4788899999987521 11233332 233333332 11 123455678999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999998753 7899999999998864 9999999999999999
Q ss_pred ChhhhhcC
Q 000777 1263 KHENLINI 1270 (1288)
Q Consensus 1263 t~~eLl~~ 1270 (1288)
+++++++.
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99988754
No 319
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-41 Score=380.58 Aligned_cols=218 Identities=28% Similarity=0.495 Sum_probs=183.1
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC----CHHH
Q 000777 1043 IELHHVSFKYPSRP--DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL----QLKW 1116 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1116 (1288)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13641 3 IKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKK 82 (287)
T ss_pred EEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 14699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcceEEEccCC--CCchhhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1117 LRQQMGLVSQEP--VLFNDTIRANIAYGKG-GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1117 lR~~i~~V~Qd~--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
.|+.++|+||+| .+|..|++||+.++.. ...+.+ .+.++++..++.. .........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (287)
T PRK13641 83 LRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSE----------DLISKSPFELSGGQMR 152 (287)
T ss_pred HHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhhCCcccCCHHHHH
Confidence 788999999998 5888999999986421 122222 2344444444431 1234556789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|++|||||+.+|++|||||||++||+.+...+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13641 153 RVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEI 232 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999875 47899999999999864 999999999999999999998
Q ss_pred hcC
Q 000777 1268 INI 1270 (1288)
Q Consensus 1268 l~~ 1270 (1288)
.+.
T Consensus 233 ~~~ 235 (287)
T PRK13641 233 FSD 235 (287)
T ss_pred hcC
Confidence 764
No 320
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-41 Score=371.63 Aligned_cols=219 Identities=26% Similarity=0.389 Sum_probs=181.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH-Hhcc
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW-LRQQ 1120 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 1120 (1288)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 3899999999963 36999999999999999999999999999999999999999999999999998877654 6788
Q ss_pred eEEEccCCCCchh-hHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcC
Q 000777 1121 MGLVSQEPVLFND-TIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVK 1199 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~g-TIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr 1199 (1288)
++|+||++.+|.+ |++||+.++.. ..+.++..+.+ .+.+..++. ++.........||||||||++||||+++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~-~~~~~~~~~~~-----~~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~ 154 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGF-FAERDQFQERI-----KWVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMS 154 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhh-ccChhHHHHHH-----HHHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHh
Confidence 9999999999974 99999987521 11222222211 112222211 1112234567899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1200 DPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1200 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
+|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 155 QPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999875 47899999999998754 999999999999999999999753
No 321
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.2e-41 Score=372.64 Aligned_cols=216 Identities=25% Similarity=0.479 Sum_probs=184.9
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcce
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 462 (1288)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 47899999996 346999999999999999999999999999999999999999999999999998776554 35689
Q ss_pred EEEcCCCCCCch-hHHHHHhcCCCCC--CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLFTG-SIKDNIAYGKDDA--TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+|++|++.+|.. |++||+.++.+.. ..++.. ..+.+.++.+ |++......+.+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999998876 9999998753211 111111 1233455555 67766778888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999999988764 6899999999998866 99999999999999999988764
No 322
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-41 Score=370.52 Aligned_cols=207 Identities=33% Similarity=0.477 Sum_probs=175.2
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
|+++|++++|++.. .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996411 1479999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccCCCCch-hhHHHHHhcCCC-CCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKG-GDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+||||++.+|. .|++||+.++.. ... .++++.++++..++.++.. ....+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHH
Confidence 99999999887 799999976421 011 2345566666666654433 334679999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEe--CCEEEEecChh
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVK--NGVIVEKGKHE 1265 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~Ive~Gt~~ 1265 (1288)
||+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.+
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 9999999999999999999999999999999874 37899999999998865 99999999 79999988753
No 323
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-41 Score=374.14 Aligned_cols=222 Identities=31% Similarity=0.498 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeecc-CCCHH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQ-KLQLK 1115 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~i~~~ 1115 (1288)
.++++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 3699999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhcceEEEccCCCCchhhHHHHHhcCCCC-CC-C----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHH
Q 000777 1116 WLRQQMGLVSQEPVLFNDTIRANIAYGKGG-DA-T----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQ 1189 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQ 1189 (1288)
.+|+.++|+||++.+|..|++||+.++... .. . ++++.++++.+++.+.+. .........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 889999999999999999999999865211 11 1 234555666666654432 2334556789999999
Q ss_pred HHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1190 RVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1190 rlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999999997
Q ss_pred cCCCc
Q 000777 1269 NIPDG 1273 (1288)
Q Consensus 1269 ~~~~g 1273 (1288)
.++..
T Consensus 233 ~~~~~ 237 (249)
T PRK14253 233 SNPKD 237 (249)
T ss_pred cCCCC
Confidence 65443
No 324
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.7e-41 Score=389.81 Aligned_cols=219 Identities=27% Similarity=0.387 Sum_probs=182.9
Q ss_pred EEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCe----eccCCCHHHH---h-
Q 000777 1047 HVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGV----EIQKLQLKWL---R- 1118 (1288)
Q Consensus 1047 nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~----di~~i~~~~l---R- 1118 (1288)
++..+|. ...+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+...+ |
T Consensus 29 ~~~~~~g---~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~ 105 (382)
T TIGR03415 29 EILDETG---LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRT 105 (382)
T ss_pred HHHHhhC---CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhc
Confidence 3444453 236899999999999999999999999999999999999999999999996 6766665544 3
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
++|+||||++.+|+ .|++||+.++.. ...+ .+++.++++.+++.++.. ....+||||||||++
T Consensus 106 ~~i~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~-----------~~~~~LSgGq~QRV~ 174 (382)
T TIGR03415 106 HRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWAD-----------KKPGELSGGMQQRVG 174 (382)
T ss_pred CCEEEEECCCcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHH
Confidence 58999999999997 799999987521 0112 235567777777765533 334579999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
|||||+++|+|||||||||+||+.+...+++.|.+..+ ++|+|+|||+++.+. .||||++|++|++++.|++++++.
T Consensus 175 LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~ 254 (382)
T TIGR03415 175 LARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVL 254 (382)
T ss_pred HHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998754 789999999999985 599999999999999999999997
Q ss_pred CCCcHHHHHH
Q 000777 1270 IPDGFYASLI 1279 (1288)
Q Consensus 1270 ~~~g~y~~L~ 1279 (1288)
++...|.+.+
T Consensus 255 ~p~~~~~~~~ 264 (382)
T TIGR03415 255 NPANDYVADF 264 (382)
T ss_pred CcchHHHHHH
Confidence 7655555443
No 325
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=376.18 Aligned_cols=224 Identities=35% Similarity=0.492 Sum_probs=187.2
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 454 (1288)
..|+++||+++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 469999999999999999999999999999999999987 699999999999863 45
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--CCH---HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--ATT---EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 529 (1288)
...+|++++|++|++.+|..|++||+.++... ... +++.++++..++ ..+++........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAV-------WDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCC-------cchhhhhhCCCcccCCHHHHH
Confidence 66778899999999999988999999976431 111 222223333222 123344566777899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeC-----------CE
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHR-----------GK 597 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~-----------G~ 597 (1288)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998777899999999999876 999999996 67
Q ss_pred EeEecChhHHhcCCCchH
Q 000777 598 IVEKGTHSKLVEDPEGAY 615 (1288)
Q Consensus 598 i~~~g~~~~l~~~~~~~~ 615 (1288)
+++.|+++++.+.+...|
T Consensus 242 ~~~~~~~~~~~~~~~~~~ 259 (269)
T PRK14259 242 LVEFNETKKIFNSPKQKA 259 (269)
T ss_pred EEEeCCHHHHHhCcCChH
Confidence 899999999987644333
No 326
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.8e-41 Score=385.23 Aligned_cols=218 Identities=24% Similarity=0.462 Sum_probs=183.0
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
..|+++|++++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 3599999999996 356999999999999999999999999999999999999999999999999997654 356789
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
||||||++.++. .|++||+.+.... .+..+.... +.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHh
Confidence 999999999885 6999999863221 222222111 12233333 3433444555789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999864 6899999999999976 999999999999999999998754
No 327
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-41 Score=376.13 Aligned_cols=219 Identities=31% Similarity=0.483 Sum_probs=183.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCC--CCCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLK--EFQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~--~~~~ 455 (1288)
.|+++|++++|+. +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. ..+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 4699999999999999999999999999999999999987 4999999999987 4455
Q ss_pred HHHhcceEEEcCCCCCCch-hHHHHHhcCCC--CC--CHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 456 QWIRKKIGLVSQEPVLFTG-SIKDNIAYGKD--DA--TTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~--~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
..++++++|++|++.+|.. |++||+.++.. .. ..+ ++.++++..++.+ .+.......+.+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWD-------EVKDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCcc-------chhhhhccChhhCCHH
Confidence 5678899999999999865 99999987531 11 111 2222233222211 1123356677899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChh
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 605 (1288)
||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999876 9999999999999999999
Q ss_pred HHhcCC
Q 000777 606 KLVEDP 611 (1288)
Q Consensus 606 ~l~~~~ 611 (1288)
++.+.+
T Consensus 234 ~~~~~~ 239 (253)
T PRK14267 234 KVFENP 239 (253)
T ss_pred HHHhCC
Confidence 987653
No 328
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6.8e-41 Score=371.39 Aligned_cols=216 Identities=28% Similarity=0.522 Sum_probs=185.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++.++
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 68999999996 346999999999999999999999999999999999999999999999999987766544 35899
Q ss_pred EEcCCCCCC-chhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLF-TGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~-~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|++|++.++ ..|++||+.++... ....+.. ..+.+.++.+ |++...+..+.+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999874 67999999875321 1221111 1233455555 677777788889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999886 36899999999999877999999999999999999888754
No 329
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=374.60 Aligned_cols=226 Identities=31% Similarity=0.442 Sum_probs=194.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccCC--CH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQKL--QL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1114 (1288)
.+.+++++++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 3889999999953 3699999999999999999999999999999999999987 799999999998643 44
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC----CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG----GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQR 1190 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~----~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQr 1190 (1288)
..+|++++|+||++.+|..|++||+.++.. .....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999986521 11123567888888887655432 2345677899999999
Q ss_pred HHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEe--------CCEEEEe
Q 000777 1191 VAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVK--------NGVIVEK 1261 (1288)
Q Consensus 1191 laiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~--------~G~Ive~ 1261 (1288)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998777899999999999865 99999996 8999999
Q ss_pred cChhhhhcCCCcHHHH
Q 000777 1262 GKHENLINIPDGFYAS 1277 (1288)
Q Consensus 1262 Gt~~eLl~~~~g~y~~ 1277 (1288)
|+++++++++...|.+
T Consensus 238 g~~~~~~~~~~~~~~~ 253 (261)
T PRK14263 238 GPTAQIFQNPREQLTS 253 (261)
T ss_pred CCHHHHHhCCCcHHHH
Confidence 9999998764444433
No 330
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-41 Score=372.20 Aligned_cols=213 Identities=37% Similarity=0.535 Sum_probs=184.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++ +++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||.++.+.+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 478999999963 369999999999999999999999999999999999999999999999999987654 368899
Q ss_pred EEccCCCCchh-hHHHHHhcCCC-----CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKG-----GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~-----~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|.+ |++||+.++.. ....++++.++++..++.++... ....||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANR-----------KPSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHH
Confidence 99999999965 99999975421 01123456667777776655443 345899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1271 (1288)
++++|++|||||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 9999999999999999999999999999998764 7899999999999865 9999999999999999999998753
No 331
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-41 Score=376.71 Aligned_cols=221 Identities=32% Similarity=0.490 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1114 (1288)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3699999999999999999999999999999999999974 69999999999853 455
Q ss_pred HHHhcceEEEccCCCCch-hhHHHHHhcCCC--CCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1115 KWLRQQMGLVSQEPVLFN-DTIRANIAYGKG--GDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
..+|+.++|++|++.+|. .|++||+.++.. ... .++.+.++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999887 599999975311 111 1234566666676654332 23345567899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEe------CCEEEE
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVK------NGVIVE 1260 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~------~G~Ive 1260 (1288)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999998777899999999999864 99999997 899999
Q ss_pred ecChhhhhcCCC
Q 000777 1261 KGKHENLINIPD 1272 (1288)
Q Consensus 1261 ~Gt~~eLl~~~~ 1272 (1288)
.|++++++..+.
T Consensus 234 ~~~~~~~~~~~~ 245 (258)
T PRK14241 234 IDDTEKIFSNPT 245 (258)
T ss_pred cCCHHHHHhCcC
Confidence 999999986533
No 332
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.6e-41 Score=368.32 Aligned_cols=202 Identities=35% Similarity=0.530 Sum_probs=174.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1119 (1288)
|+++|++++|++ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 2469999999999999999999999999999999999999999999999999987754 35788
Q ss_pred ceEEEccCCCCch-hhHHHHHhcCCC-----CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1120 QMGLVSQEPVLFN-DTIRANIAYGKG-----GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~-gTIreNl~~g~~-----~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
+++|+||+|.+|. .|++||+.++.. ....+++++++++..++.++... ...+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADA-----------FPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHH
Confidence 9999999999885 699999986411 11124566777777777655433 235799999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCE
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGV 1257 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1257 (1288)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875 47899999999999976 99999999985
No 333
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.2e-41 Score=367.87 Aligned_cols=202 Identities=38% Similarity=0.638 Sum_probs=172.5
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEE
Q 000777 1044 ELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGL 1123 (1288)
Q Consensus 1044 ~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1123 (1288)
+++||+++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999642 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCC--CCchhhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1124 VSQEP--VLFNDTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1124 V~Qd~--~Lf~gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
+||++ .++..|++||+.++.. ...+ ++++.++++..++.++ +......||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGL-----------RDRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999976421 1122 2234455555555433 334557899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCE
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGV 1257 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1257 (1288)
|+++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 37899999999999987 99999999985
No 334
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=373.00 Aligned_cols=214 Identities=29% Similarity=0.471 Sum_probs=186.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++...+...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCC-chhhHHHHHhcCCCCC-C----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVL-FNDTIRANIAYGKGGD-A----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~L-f~gTIreNl~~g~~~~-~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+ +..|++||+.++.... . .++++.++++..++.++ .......||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHL-----------AGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhH-----------hcCCcccCCHHHHHHHHHHHH
Confidence 99999987 6789999998752111 1 13345666666666443 234456899999999999999
Q ss_pred Hc------CCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1197 IV------KDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1197 Ll------r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
|+ .+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 47899999999999874 999999999999999999998
Q ss_pred hcC
Q 000777 1268 INI 1270 (1288)
Q Consensus 1268 l~~ 1270 (1288)
.+.
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 764
No 335
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.8e-41 Score=378.57 Aligned_cols=226 Identities=28% Similarity=0.469 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WIR 459 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r 459 (1288)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 589999999995 34699999999999999999999999999999999999999999999999998766543 356
Q ss_pred cceEEEcCCCCCCch-hHHHHHhcCCCC---CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 460 KKIGLVSQEPVLFTG-SIKDNIAYGKDD---ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
++++|++|++.+|.. |++||+.++... .+..+... .+.+.++.+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS-----TVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999875 999999874211 12211111 122234444 5555556677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 236 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPD 236 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCc
Confidence 99999999999999999999999999999998753 6899999999999876 99999999999999999999987543
Q ss_pred chHHHH
Q 000777 613 GAYSQL 618 (1288)
Q Consensus 613 ~~~~~~ 618 (1288)
..+..+
T Consensus 237 ~~~~~~ 242 (269)
T PRK11831 237 PRVRQF 242 (269)
T ss_pred HHHHHH
Confidence 333333
No 336
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=373.39 Aligned_cols=220 Identities=32% Similarity=0.503 Sum_probs=184.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCCCHHH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEFQLQW 457 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~~~~ 457 (1288)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 4699999999999999999999999999999999999974 7999999999998877778
Q ss_pred HhcceEEEcCCCCCC-chhHHHHHhcCCCCC----CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 458 IRKKIGLVSQEPVLF-TGSIKDNIAYGKDDA----TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 458 ~r~~i~~v~Q~~~l~-~~ti~~ni~~~~~~~----~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
+++.|+|++|++.++ ..|++||+.++.... .. +++.++++..++.+ .++......+.+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWD-------EVKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCCcccCCHHHH
Confidence 888999999999755 679999998753210 11 12223333332211 112334566789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++|||||+++|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999998
Q ss_pred hcCCC
Q 000777 608 VEDPE 612 (1288)
Q Consensus 608 ~~~~~ 612 (1288)
.+.+.
T Consensus 233 ~~~~~ 237 (250)
T PRK14247 233 FTNPR 237 (250)
T ss_pred HcCCc
Confidence 76543
No 337
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-41 Score=380.65 Aligned_cols=219 Identities=26% Similarity=0.523 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCC--CCCHHHHhc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLK--EFQLQWIRK 460 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~r~ 460 (1288)
.|+++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+++
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999952 356999999999999999999999999999999999999999999999999985 334566788
Q ss_pred ceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 461 KIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 461 ~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
.|+|+||+| .+|+.|++||+.++... .+.++..+. +.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 57889999999875321 222222111 12233434 55555667788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. |||+++|++|++++.|+++++...
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999998864 7899999999999975 999999999999999999998764
No 338
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=375.19 Aligned_cols=223 Identities=30% Similarity=0.506 Sum_probs=190.7
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CceEEECCeeccC--CC
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD-----AGHITLDGVEIQK--LQ 1113 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~ 1113 (1288)
+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 35999999999963 35999999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcceEEEccCCCCchhhHHHHHhcCCC-----CCC-CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhH
Q 000777 1114 LKWLRQQMGLVSQEPVLFNDTIRANIAYGKG-----GDA-TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQ 1187 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-----~~~-sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1187 (1288)
...+|+.++|+||++.+|..|++||+.++.. +.. .++++.++++..++.+++.. ..+..+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999975310 111 12346667777777655442 2445677899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeC-----CEEE
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKN-----GVIV 1259 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~-----G~Iv 1259 (1288)
|||++|||||+++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999853 47999999999999865 999999999 9999
Q ss_pred EecChhhhhcCCCc
Q 000777 1260 EKGKHENLINIPDG 1273 (1288)
Q Consensus 1260 e~Gt~~eLl~~~~g 1273 (1288)
+.|+++++...+..
T Consensus 236 ~~~~~~~~~~~~~~ 249 (261)
T PRK14258 236 EFGLTKKIFNSPHD 249 (261)
T ss_pred EeCCHHHHHhCCCC
Confidence 99999999876444
No 339
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=377.76 Aligned_cols=214 Identities=29% Similarity=0.461 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeecc--CCCHHHHhcc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQ--KLQLKWLRQQ 1120 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~~ 1120 (1288)
|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999963 36999999999999999999999999999999999999999999999999985 3345678899
Q ss_pred eEEEccCCC--CchhhHHHHHhcCCC-CCCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1121 MGLVSQEPV--LFNDTIRANIAYGKG-GDATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1121 i~~V~Qd~~--Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
++||||++. +|..|+.+|+.++.. ...+. +++.++++..++.++. ......||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 999999985 677899999976311 11222 2345566666664432 23456899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||||+.+|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999965 999999999999999999998764
No 340
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-41 Score=372.52 Aligned_cols=204 Identities=32% Similarity=0.428 Sum_probs=179.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 4999999999963 36999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEccCCCCch-hhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
+|++|++.+|. .|++||+.++.. ...++++.++++..++.++ ......+||||||||++|||||+++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~-~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~ 151 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLK-GQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHR 151 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhccc-chHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999987 699999987522 2235567777777776544 2344578999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHE 1265 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1265 (1288)
|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 152 PGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999998864 37899999999999865 9999999999999998865
No 341
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=375.27 Aligned_cols=226 Identities=29% Similarity=0.467 Sum_probs=192.7
Q ss_pred CccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeecc----
Q 000777 1040 KGEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQ---- 1110 (1288)
Q Consensus 1040 ~g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~---- 1110 (1288)
.+.|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|++||.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 457999999999963 3699999999999999999999999999999999999875 7999999998874
Q ss_pred CCCHHHHhcceEEEccCCCCchhhHHHHHhcCCC-C-----CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1111 KLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKG-G-----DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1111 ~i~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
..+...+|+.++|+||++.+|.+|++||+.++.. . ...++++.++++.+++.+.+ ....+.....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCcccCC
Confidence 3345678899999999999999999999986421 0 11245667777777765433 233455677899
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 000777 1185 GGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGK 1263 (1288)
Q Consensus 1185 gGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt 1263 (1288)
||||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999965 99999999999999999
Q ss_pred hhhhhcCCCcHH
Q 000777 1264 HENLINIPDGFY 1275 (1288)
Q Consensus 1264 ~~eLl~~~~g~y 1275 (1288)
++++...+...|
T Consensus 244 ~~~~~~~~~~~~ 255 (265)
T PRK14252 244 TDTIFIKPKNKQ 255 (265)
T ss_pred HHHHHhCCCCHH
Confidence 999986543333
No 342
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=374.08 Aligned_cols=223 Identities=30% Similarity=0.467 Sum_probs=185.5
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC--C---CCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD--P---QAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~--~---~~G~i~~~g~~~~~--~~~ 455 (1288)
.|+++|+++.|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 469999999999999999999999999999999999987 3 69999999999864 344
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCCC---CHHH----HHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA---TTEE----IRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..+++.++|++|++.+|..|++||+.++.... ..++ +.++++..++.+ .+.......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWD-------EVKDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhhhhhCCcccCCHHHH
Confidence 56778999999999999889999998753211 1121 222222222221 112345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999875 999999999999999999998
Q ss_pred hcCCCchH
Q 000777 608 VEDPEGAY 615 (1288)
Q Consensus 608 ~~~~~~~~ 615 (1288)
.+++...|
T Consensus 242 ~~~~~~~~ 249 (259)
T PRK14274 242 FSNPDDQR 249 (259)
T ss_pred hhCCCCHH
Confidence 76544433
No 343
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.4e-41 Score=388.71 Aligned_cols=212 Identities=28% Similarity=0.466 Sum_probs=176.1
Q ss_pred CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCe----eCCCCCHHHH---h-cceEEEcCCCC
Q 000777 399 EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGI----NLKEFQLQWI---R-KKIGLVSQEPV 470 (1288)
Q Consensus 399 ~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~----~~~~~~~~~~---r-~~i~~v~Q~~~ 470 (1288)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 46899999999999999999999999999999999999999999999996 5666655443 3 58999999999
Q ss_pred CCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000777 471 LFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLD 547 (1288)
Q Consensus 471 l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlD 547 (1288)
+|+ .|++||+.++... .+.++.. ..+.+.++.+ |++......+.+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 6999999987421 1221111 1122333433 5554555666799999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCCchHHH
Q 000777 548 EATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPEGAYSQ 617 (1288)
Q Consensus 548 Epts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 617 (1288)
||||+||+.+++.+++.|.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|..
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 99999999999999999998864 6899999999999865 9999999999999999999998765555543
No 344
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-41 Score=372.97 Aligned_cols=218 Identities=23% Similarity=0.424 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH-Hhcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW-LRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1121 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 4 l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 4 LTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred EEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 889999999963 36999999999999999999999999999999999999999999999999998877544 57899
Q ss_pred EEEccCCCCch-hhHHHHHhcCCC--CCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKG--GDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~--~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
+|+||++.+|. .|++||+.+... ...+.++.+ ..+.+++..+ |++.........||||||||++||||++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALA 153 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHh
Confidence 99999999887 599999986421 111222211 1122333333 4444455667789999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 9999999999999999999999999998865 47899999999987755 999999999999999999999763
No 345
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.1e-41 Score=383.44 Aligned_cols=214 Identities=30% Similarity=0.472 Sum_probs=181.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999998654 35678999
Q ss_pred EEEccCCCCch-hhHHHHHhcC-CCCCCCHHH----HHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYG-KGGDATEAE----IQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g-~~~~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+|+||++.+|. .|++||+.+. .....+..+ +.++++..++.+ .+++ ....||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-------~~~~----~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-------KADV----RVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-------HhcC----chhhCCHHHHHHHHHHH
Confidence 99999998885 6999999742 111223333 333444444332 2333 34579999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999874 47899999999999965 999999999999999999999764
No 346
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-41 Score=390.73 Aligned_cols=227 Identities=33% Similarity=0.560 Sum_probs=185.9
Q ss_pred cEEEEeEEEECCCCC---------------------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCc
Q 000777 383 DIELRDVYFSYPARP---------------------NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAG 441 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~---------------------~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 441 (1288)
.|+++||++.|+..+ ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 367777777775322 12379999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHH----hcceEEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccc
Q 000777 442 EVLIDGINLKEFQLQWI----RKKIGLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDT 514 (1288)
Q Consensus 442 ~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t 514 (1288)
+|.++|.++...+...+ +++++||+|++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~--gL~~ 156 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERRE-----KALDALRQV--GLEN 156 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCh
Confidence 99999999988776543 468999999999986 5999999986321 12211111 122334444 5555
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEE
Q 000777 515 LVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRN-ADMIA 591 (1288)
Q Consensus 515 ~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~ 591 (1288)
.......+||||||||++|||||+.+|++|||||||++||+.+++.+++.|.++. .++|+|++||+++.+.. ||+|+
T Consensus 157 ~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 157 YAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEE
Confidence 5566678999999999999999999999999999999999999999999999875 36899999999999865 99999
Q ss_pred EEeCCEEeEecChhHHhcCCCchHH
Q 000777 592 VIHRGKIVEKGTHSKLVEDPEGAYS 616 (1288)
Q Consensus 592 ~l~~G~i~~~g~~~~l~~~~~~~~~ 616 (1288)
+|++|++++.|+++++..++...|.
T Consensus 237 vL~~G~i~~~g~~~~l~~~~~~~~v 261 (400)
T PRK10070 237 IMQNGEVVQVGTPDEILNNPANDYV 261 (400)
T ss_pred EEECCEEEecCCHHHHHhCcccHHH
Confidence 9999999999999999876554443
No 347
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.3e-40 Score=370.95 Aligned_cols=220 Identities=33% Similarity=0.561 Sum_probs=185.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC--------
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ-------- 454 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-------- 454 (1288)
.++++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3899999999963 46999999999999999999999999999999999999999999999999986532
Q ss_pred HHHHhcceEEEcCCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000777 455 LQWIRKKIGLVSQEPVLFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
...+++.++||+|++.+|. .|++||+.++.. ....++..+ .+.+.++.+ |++......+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 2456789999999998885 699999986421 112221111 123445555 66666677888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998764 6899999999999976 9999999999999999999987
Q ss_pred cCCC
Q 000777 609 EDPE 612 (1288)
Q Consensus 609 ~~~~ 612 (1288)
+.+.
T Consensus 233 ~~~~ 236 (250)
T PRK11264 233 ADPQ 236 (250)
T ss_pred cCCC
Confidence 6543
No 348
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.4e-40 Score=369.56 Aligned_cols=214 Identities=29% Similarity=0.483 Sum_probs=190.6
Q ss_pred CCCcccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH
Q 000777 378 DDIRGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW 457 (1288)
Q Consensus 378 ~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~ 457 (1288)
+...+.|+++|+++.. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 34 ~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g---------- 98 (282)
T cd03291 34 SSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG---------- 98 (282)
T ss_pred CCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC----------
Confidence 3345679999999952 3599999999999999999999999999999999999999999999998
Q ss_pred HhcceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 458 IRKKIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 458 ~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
.|+|++|++.+|+.|++||+.++.. ....++..+++..++.+.+..+|.++++.+++.+.+||||||||++|||||
T Consensus 99 ---~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL 174 (282)
T cd03291 99 ---RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAV 174 (282)
T ss_pred ---EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHH
Confidence 5999999999999999999998643 223345566666778888899999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHH-HHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEAL-DRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+.+|++|||||||++||+.+...+.+.+ +.+.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 175 ~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 175 YKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL 248 (282)
T ss_pred hcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999888754 566667899999999999888999999999999999999998764
No 349
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=367.74 Aligned_cols=214 Identities=26% Similarity=0.464 Sum_probs=180.2
Q ss_pred cEEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000777 383 DIELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW---I 458 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 458 (1288)
.++++||+|+|+.+. .+++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999996322 246999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-cceEEEcCCCCCCch-hHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 459 R-KKIGLVSQEPVLFTG-SIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 459 r-~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+ +.++|++|++.+|.. |++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999988864 99999987421 112221111 123344444 666666777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCEEeEecC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 603 (1288)
||++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999875 3689999999999998888999999999998775
No 350
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=376.86 Aligned_cols=217 Identities=32% Similarity=0.520 Sum_probs=186.1
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEcCCCC--CCchhHHHHHhcCCC--CCCHHH----HHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 463 GLVSQEPV--LFTGSIKDNIAYGKD--DATTEE----IRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 463 ~~v~Q~~~--l~~~ti~~ni~~~~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+|++|+|. ++..|+.|||.++.. ....++ +..+++.++ +..........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVN-----------MLDFKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCC-----------CHhHhhCCcccCCHHHHHHHHHH
Confidence 99999983 667899999987532 122222 233333333 33334456679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998864 6899999999999978999999999999999999998764
No 351
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.3e-41 Score=364.82 Aligned_cols=199 Identities=29% Similarity=0.522 Sum_probs=168.8
Q ss_pred EEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEE
Q 000777 385 ELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGL 464 (1288)
Q Consensus 385 ~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 464 (1288)
+++|++++|++ .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 36899999963 1469999999999999999999999999999999999999999999999998854 346678999
Q ss_pred EcCCC--CCCchhHHHHHhcCCCCCC--HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 465 VSQEP--VLFTGSIKDNIAYGKDDAT--TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 465 v~Q~~--~l~~~ti~~ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
++|+| .++..|++||+.++.+... .+++.++++.. |++........+||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL-----------DLYALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc-----------CCchhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4678899999998643222 22344444444 344344555679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEe
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIV 599 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~ 599 (1288)
|++|||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 46899999999999976 9999999999975
No 352
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.5e-41 Score=369.57 Aligned_cols=208 Identities=35% Similarity=0.534 Sum_probs=174.8
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH----HH
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ----WI 458 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~----~~ 458 (1288)
|+++|++++|+... .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996311 14699999999999999999999999999999999999999999999999999876643 24
Q ss_pred hcceEEEcCCCCCCch-hHHHHHhcCCCCC--CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 459 RKKIGLVSQEPVLFTG-SIKDNIAYGKDDA--TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 459 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
+++++|++|++.+|.. |++||+.++.... ...+. ...+.+.++.+ |++......+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5789999999998875 9999998864311 11111 11223445555 6666667778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKI 598 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i 598 (1288)
||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998864 6899999999999878999999999974
No 353
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=371.72 Aligned_cols=223 Identities=34% Similarity=0.530 Sum_probs=185.6
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 454 (1288)
+.|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999963 4699999999999999999999999999999999999763 69999999999864 34
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCCC---CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA---TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
...+|+.++|++|++.+|+.|++||+.++.... .. +++.++++..++.+ ++....+..+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHH
Confidence 556788999999999999999999998753211 11 22223333333221 22234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhH
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999998866 99999999999999999999
Q ss_pred HhcCCCch
Q 000777 607 LVEDPEGA 614 (1288)
Q Consensus 607 l~~~~~~~ 614 (1288)
+...+...
T Consensus 232 ~~~~~~~~ 239 (250)
T PRK14240 232 LFTNPKDK 239 (250)
T ss_pred HHhCCCCh
Confidence 87654433
No 354
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-41 Score=385.95 Aligned_cols=229 Identities=21% Similarity=0.362 Sum_probs=190.4
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC----CCCceEEECCeeccCCCHHHH
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD----PDAGHITLDGVEIQKLQLKWL 1117 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~l 1117 (1288)
|+++||+++|+... ..++|+||||+|++||++||||+||||||||+++|+|+.+ |++|+|++||+++.+++...+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 78999999996421 2469999999999999999999999999999999999986 589999999999988876655
Q ss_pred h----cceEEEccCCCC--c-hhhHHHHHhcC---C--CC----C--CCHHHHHHHHHHhchhHHHHhhhccccccccCC
Q 000777 1118 R----QQMGLVSQEPVL--F-NDTIRANIAYG---K--GG----D--ATEAEIQAASEMANAHKFICSLQQGYDTMVGER 1179 (1288)
Q Consensus 1118 R----~~i~~V~Qd~~L--f-~gTIreNl~~g---~--~~----~--~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~ 1179 (1288)
+ ++|+||||+|.. + ..||.+|+... . .. . ..++++.++++.+++.+.-. .....
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhCC
Confidence 3 479999999963 3 35888888531 0 00 0 11345677778777754311 12344
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCC
Q 000777 1180 GLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNG 1256 (1288)
Q Consensus 1180 G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G 1256 (1288)
...||||||||++|||||+.+|+||||||||++||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 568999999999999999999999999999999999999999999998764 7899999999999965 9999999999
Q ss_pred EEEEecChhhhhcCCCcHHHHHH
Q 000777 1257 VIVEKGKHENLINIPDGFYASLI 1279 (1288)
Q Consensus 1257 ~Ive~Gt~~eLl~~~~g~y~~L~ 1279 (1288)
+|+|.|+++++++++...|.+.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHHHH
Confidence 99999999999987777786643
No 355
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=383.90 Aligned_cols=230 Identities=31% Similarity=0.483 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCC-------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH
Q 000777 383 DIELRDVYFSYPARP-------NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~-------~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~ 455 (1288)
.|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhcceEEEcCCCC--CCc-hhHHHHHhcCC---CCCCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCCh
Q 000777 456 Q---WIRKKIGLVSQEPV--LFT-GSIKDNIAYGK---DDATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSG 525 (1288)
Q Consensus 456 ~---~~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSg 525 (1288)
. .+|++|+||+|+|. |+. .||.+|+..+. ......+.. ..+.++++.+ |++ ......+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERR-----EKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 46788999999993 554 48998886421 111221111 1122334444 443 234566789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 526 GQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 526 Gqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
|||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999998854 6899999999999976 9999999999999999
Q ss_pred ChhHHhcCCCchHHHHH
Q 000777 603 THSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 603 ~~~~l~~~~~~~~~~~~ 619 (1288)
+.+++++++...|.+..
T Consensus 238 ~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 238 TKEQIFNNPRHPYTQAL 254 (327)
T ss_pred CHHHHhcCCCCHHHHHH
Confidence 99999988777777643
No 356
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=7.7e-41 Score=367.72 Aligned_cols=211 Identities=28% Similarity=0.472 Sum_probs=182.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||++.|++ .++++|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4999999999963 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCCchhhHHHHHhcCC---CCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHc
Q 000777 1122 GLVSQEPVLFNDTIRANIAYGK---GGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIV 1198 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~gTIreNl~~g~---~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALl 1198 (1288)
+|+||++.+|+.|++||+.++. .....++++.++++..++.+ +.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997531 11112334445555555432 2334566789999999999999999
Q ss_pred CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEe-CCEEEEecChh
Q 000777 1199 KDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVK-NGVIVEKGKHE 1265 (1288)
Q Consensus 1199 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~-~G~Ive~Gt~~ 1265 (1288)
++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999998753 789999999999998899999995 67778899985
No 357
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=375.83 Aligned_cols=214 Identities=27% Similarity=0.423 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+++.+
T Consensus 7 ~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 7 RLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 5999999999973 3699999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEccCCCCch-hhHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+|+||++.+|. .|++||+.++... +..+++++++++..++.++ .......||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHHHH
Confidence 99999998874 6999999864211 0122356667776666544 2345678999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
+||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999998865 9999999999999999999987
Q ss_pred c
Q 000777 1269 N 1269 (1288)
Q Consensus 1269 ~ 1269 (1288)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 358
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-40 Score=364.85 Aligned_cols=210 Identities=28% Similarity=0.463 Sum_probs=187.1
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH----HHHhc
Q 000777 1044 ELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL----KWLRQ 1119 (1288)
Q Consensus 1044 ~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~----~~lR~ 1119 (1288)
.+.|+.|+|+.. .++++|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998876542 34577
Q ss_pred ceEEEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcC
Q 000777 1120 QMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVK 1199 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr 1199 (1288)
.++|++|+|.+|+.|++||+.+.. ..++++.+++++..++.+++..+|.|+++.++....+||||||||++||||+++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~ 157 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGS--PFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQ 157 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcC--cCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhh
Confidence 899999999999999999998752 245667788889999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHH--HHHHHc-CCceEEEEecCchhhhhcCEEEEEeCCE
Q 000777 1200 DPKILLLDEATSALDAESERVVQD--ALDRVM-KNRTTVVVAHRLSTIKNADMIAVVKNGV 1257 (1288)
Q Consensus 1200 ~p~ILlLDEaTSaLD~~te~~I~~--~L~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1257 (1288)
+|++|||||||++||+.+...+.+ .++... .++|+|++||+.+.+..||++++|++|.
T Consensus 158 ~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 158 NTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999999998887 444433 3689999999999998899999999884
No 359
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=372.01 Aligned_cols=228 Identities=28% Similarity=0.450 Sum_probs=192.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECC------eeccCCCHH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDG------VEIQKLQLK 1115 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG------~di~~i~~~ 1115 (1288)
.|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 4999999999963 3699999999999999999999999999999999999999997666665 677777777
Q ss_pred HHhcceEEEccCCCCchh-hHHHHHhcCCC--CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1116 WLRQQMGLVSQEPVLFND-TIRANIAYGKG--GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~g-TIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
.+|++++|+||+|.+|.+ |++||+.++.. ....++ .+.++++..++.+++. ...+..+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999975 99999986421 111222 3455666666654331 123455678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++||||++++|++|||||||++||..++..+.+.|++..+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877799999999999995 5999999999999999999999
Q ss_pred hcCCCcHHHHHH
Q 000777 1268 INIPDGFYASLI 1279 (1288)
Q Consensus 1268 l~~~~g~y~~L~ 1279 (1288)
.+.+...|.+.+
T Consensus 240 ~~~~~~~~~~~~ 251 (257)
T PRK14246 240 FTSPKNELTEKY 251 (257)
T ss_pred HhCCCcHHHHHH
Confidence 987665566554
No 360
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=374.17 Aligned_cols=223 Identities=31% Similarity=0.491 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCCC--H
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEFQ--L 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~--~ 455 (1288)
.|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++...+ .
T Consensus 12 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 599999999996 24699999999999999999999999999999999999985 8999999999986432 3
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCC--CCCHHH----HHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKD--DATTEE----IRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 529 (1288)
..+++.++|++|++.+|..|++||+.++.. ....++ +.++++..++.+ .........+.+|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWD-------ETSDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCChhhCCHHHHH
Confidence 456788999999999999999999987532 122221 222222222211 1123455677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988777899999999999866 9999999999999999999997
Q ss_pred cCCCchH
Q 000777 609 EDPEGAY 615 (1288)
Q Consensus 609 ~~~~~~~ 615 (1288)
+++...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 6644444
No 361
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.8e-41 Score=366.28 Aligned_cols=203 Identities=32% Similarity=0.502 Sum_probs=173.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1119 (1288)
|+++||+++|++. +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4689999999642 369999999999999999999999999999999999999999999999999987653 35788
Q ss_pred ceEEEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1120 QMGLVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
+++||||++.+|. .|++||+.++.. ...+ ++++.++++..++.+.. .....+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-----------RALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHH
Confidence 9999999999987 599999986421 0112 23455666666665433 23345899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVI 1258 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1258 (1288)
||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 57899999999999976 999999999974
No 362
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=373.22 Aligned_cols=225 Identities=29% Similarity=0.458 Sum_probs=186.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CceEEECCeeccC--CCHH
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD-----AGHITLDGVEIQK--LQLK 1115 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~~~ 1115 (1288)
++++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 5 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 5 LSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 789999999963 46999999999999999999999999999999999999874 8999999999865 3455
Q ss_pred HHhcceEEEccCCCCch-hhHHHHHhcCCC-CCC-CHHHHH----HHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1116 WLRQQMGLVSQEPVLFN-DTIRANIAYGKG-GDA-TEAEIQ----AASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~~-~~~-sd~ei~----~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
.+|+.++|+||++.+|. .|++||+.++.. ... .+++.. +.++..++.+.+ +..++ ....+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~----~~~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLK----TPATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhc----CCcccCCHHHH
Confidence 77899999999999887 599999975421 111 233332 233334443322 22233 44568999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999986 999999999999999999999
Q ss_pred hcCCCcHHHH
Q 000777 1268 INIPDGFYAS 1277 (1288)
Q Consensus 1268 l~~~~g~y~~ 1277 (1288)
+.++...|..
T Consensus 235 ~~~~~~~~~~ 244 (252)
T PRK14272 235 FTNPRDERTE 244 (252)
T ss_pred HhCcCcHHHH
Confidence 8765554433
No 363
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.8e-40 Score=374.10 Aligned_cols=230 Identities=26% Similarity=0.440 Sum_probs=190.8
Q ss_pred cEEEEEEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH
Q 000777 1042 EIELHHVSFKYPSR------PDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK 1115 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~ 1115 (1288)
-|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999631 124699999999999999999999999999999999999999999999999999765666
Q ss_pred HHhcceEEEccCCC--Cch-hhHHHHHhcCC--CCC----CCHHHHHHHHHHhchh-HHHHhhhccccccccCCCCCCCh
Q 000777 1116 WLRQQMGLVSQEPV--LFN-DTIRANIAYGK--GGD----ATEAEIQAASEMANAH-KFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1116 ~lR~~i~~V~Qd~~--Lf~-gTIreNl~~g~--~~~----~sd~ei~~al~~a~l~-~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
..|++++|+||++. ++. -|+.+|+.+.. ... ..++++.++++..++. +.. + ....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-------S----YYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-------h----cCchhcCH
Confidence 66788999999985 443 48889886421 001 1234567777777773 221 2 23457999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999986 9999999999999999
Q ss_pred ChhhhhcCC-CcHHHHHHHHh
Q 000777 1263 KHENLINIP-DGFYASLIALH 1282 (1288)
Q Consensus 1263 t~~eLl~~~-~g~y~~L~~~~ 1282 (1288)
+++++.+.+ ...+++++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998764 34566777644
No 364
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.2e-40 Score=373.93 Aligned_cols=213 Identities=28% Similarity=0.434 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
++++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEccCCC-CchhhHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHH
Q 000777 1123 LVSQEPV-LFNDTIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVA 1192 (1288)
Q Consensus 1123 ~V~Qd~~-Lf~gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrla 1192 (1288)
|+||++. .+..|++||+.++... ...++++.++++..++.+. .......||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHL-----------ADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCHHHHHHHH
Confidence 9999985 4568999999875210 0112345666666665433 33445689999999999
Q ss_pred HHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhc
Q 000777 1193 IARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1193 iARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~ 1269 (1288)
||||++.+|+++||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 3689999999999995 599999999999999999999875
No 365
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.4e-40 Score=368.75 Aligned_cols=212 Identities=36% Similarity=0.557 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++ +++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999973 369999999999999999999999999999999999999999999999999976553 478899
Q ss_pred EEccCCCCchh-hHHHHHhcCCCC-CC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKGG-DA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~~-~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||+|.+|.+ |++||+.++... .. .++++.++++..++.++. .....+|||||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLG-----------DRYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999865210 11 133455556655554432 23446899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
++++|+++||||||++||++++..+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998754 6899999999999865 999999999999999999999865
No 366
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-40 Score=370.99 Aligned_cols=217 Identities=31% Similarity=0.550 Sum_probs=185.5
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC--HHHHhcc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ--LQWIRKK 461 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~--~~~~r~~ 461 (1288)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...++++
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 68999999996 246999999999999999999999999999999999999999999999999987643 3566788
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
++|++|++.++. .|++||+.++.. ..+..+..+ .+.+.++.+ |++......+.+||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998885 699999987531 112221111 123445555 666666777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+.+|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999988754 6899999999999976 999999999999999999988765
No 367
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-40 Score=375.43 Aligned_cols=220 Identities=31% Similarity=0.474 Sum_probs=184.1
Q ss_pred EEEEeEEEECCCC------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH
Q 000777 384 IELRDVYFSYPAR------PNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW 457 (1288)
Q Consensus 384 i~~~~v~~~y~~~------~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~ 457 (1288)
|+++||+|+|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1357999999999999999999999999999999999999999999999999998776543
Q ss_pred ---HhcceEEEcCCCC--CC-chhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHH
Q 000777 458 ---IRKKIGLVSQEPV--LF-TGSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQ 527 (1288)
Q Consensus 458 ---~r~~i~~v~Q~~~--l~-~~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq 527 (1288)
+++.|+|++|+|. ++ ..|++||+.++.. .....+. ...+.+.++.+ |++ ...+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 5678999999983 44 4699999975421 1111111 11123445555 664 34567788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecCh
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 604 (1288)
|||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998864 6899999999999975 999999999999999999
Q ss_pred hHHhcC
Q 000777 605 SKLVED 610 (1288)
Q Consensus 605 ~~l~~~ 610 (1288)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 999875
No 368
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=373.05 Aligned_cols=224 Identities=30% Similarity=0.457 Sum_probs=189.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD--P---DAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 1114 (1288)
-|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 3899999999973 369999999999999999999999999999999999975 4 58999999999864 345
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKG-GDA-----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQK 1188 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQr 1188 (1288)
..+|++++|+||++.+|..|+++|+.++.. ... .++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 567889999999999999999999986411 111 123455566666654333 2234455678999999
Q ss_pred HHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhh
Q 000777 1189 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENL 1267 (1288)
Q Consensus 1189 QrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1267 (1288)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999999999
Q ss_pred hcCCCcHH
Q 000777 1268 INIPDGFY 1275 (1288)
Q Consensus 1268 l~~~~g~y 1275 (1288)
..++...+
T Consensus 235 ~~~~~~~~ 242 (252)
T PRK14255 235 FLNPKEKE 242 (252)
T ss_pred hcCCCChH
Confidence 87655443
No 369
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-41 Score=364.31 Aligned_cols=203 Identities=27% Similarity=0.509 Sum_probs=173.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++|+|++ +++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 478999999963 46999999999999 99999999999999999999999999999999999987766 66788999
Q ss_pred EEcCCCCCCch-hHHHHHhcCCC--CCCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 464 LVSQEPVLFTG-SIKDNIAYGKD--DATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 464 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
|++|++.+|.. |++||+.+... .... +++.++++..++ +........+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNL-----------GDRAKKKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC-----------HHHHhCchhhCCHHHHHHHHHHHH
Confidence 99999998875 99999986421 1111 223333443333 333344567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
++++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777899999999999975 9999999999998765
No 370
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-40 Score=359.80 Aligned_cols=200 Identities=34% Similarity=0.553 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 384 IELRDVYFSYPARPN--EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~--~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
++++||+++|+...+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999964211 3699999999999999999999999999999999999999999999998 6
Q ss_pred eEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 462 IGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 462 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
|+|++|+|.+|+.|++||+.++.. ...++..++.+.+++.+++..+|.|+++.+++.+.+||||||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 3445667778888888999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH-HHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCE
Q 000777 542 RILLLDEATSALDAESEKVVQE-ALDRIM-VNRTTVIVAHRLSTVRNADMIAVIHRGK 597 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~-~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~ 597 (1288)
+++||||||++||+++.+.+.+ .++.+. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 456554 3689999999999998899999999985
No 371
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.2e-40 Score=373.39 Aligned_cols=222 Identities=32% Similarity=0.536 Sum_probs=186.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC---------
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ--------- 454 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~--------- 454 (1288)
|+++||+++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 478999999963 46999999999999999999999999999999999999999999999999986543
Q ss_pred ----HHHHhcceEEEcCCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 455 ----LQWIRKKIGLVSQEPVLFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 455 ----~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
...+++.++|++|++.+|. .|++||+.++.. ....++..+ .+.+.++.+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2356789999999999885 799999987521 112211111 223445555 6666667778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecC
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 603 (1288)
||||++|||||+.+|+++||||||++||+.++..+.+.|+++.+ +.|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998754 6899999999999865 99999999999999999
Q ss_pred hhHHhcCCCchH
Q 000777 604 HSKLVEDPEGAY 615 (1288)
Q Consensus 604 ~~~l~~~~~~~~ 615 (1288)
++++.+.+...+
T Consensus 231 ~~~~~~~~~~~~ 242 (252)
T TIGR03005 231 PDEIFRQPKEER 242 (252)
T ss_pred HHHHhcCCCcHH
Confidence 999976644333
No 372
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.4e-40 Score=380.84 Aligned_cols=213 Identities=23% Similarity=0.466 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999976 4457889999
Q ss_pred EEccCCCCchh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|.+ |++||+.+... ...+ .+++.++++..++.+ .......+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRP-----------EQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCch-----------HhcCchhhCCHHHHHHHHHHHH
Confidence 99999999975 99999975311 0112 234555555555443 3345567899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|+++|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999999876 999999999999999999999764
No 373
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-40 Score=365.35 Aligned_cols=213 Identities=25% Similarity=0.436 Sum_probs=176.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999988653 345677899
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|++|++.++. .|++||+.++.. .....+..+ .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 499999987421 111111111 112333333 444444555679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999988753 6799999999999876 999999999999999987764
No 374
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.6e-41 Score=366.41 Aligned_cols=199 Identities=29% Similarity=0.505 Sum_probs=169.8
Q ss_pred EEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEE
Q 000777 1044 ELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGL 1123 (1288)
Q Consensus 1044 ~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1123 (1288)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 36999999999999999999999999999999999999999999999998874 46889999
Q ss_pred EccCCCC---chhhHHHHHhcCCCC---------CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1124 VSQEPVL---FNDTIRANIAYGKGG---------DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1124 V~Qd~~L---f~gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+||++.+ |+.|++||+.++... ...++++.++++..++.++.. ....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHH
Confidence 9999976 668999999864211 012345666777776655432 33468999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
+|||||+++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 57899999999999966 9999999986 66654
No 375
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.6e-40 Score=366.83 Aligned_cols=209 Identities=29% Similarity=0.417 Sum_probs=177.4
Q ss_pred cEEEEEEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH---H
Q 000777 1042 EIELHHVSFKYPSRPD-VQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW---L 1117 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 1117 (1288)
-|+++||+++|++... .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974211 35999999999999999999999999999999999999999999999999998877543 2
Q ss_pred -hcceEEEccCCCCchh-hHHHHHhcCCC-CCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHH
Q 000777 1118 -RQQMGLVSQEPVLFND-TIRANIAYGKG-GDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQR 1190 (1288)
Q Consensus 1118 -R~~i~~V~Qd~~Lf~g-TIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQr 1190 (1288)
+++++|+||++.+|.. |++||+.++.. ... ..+++.++++..++.++.. .....||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHH
Confidence 3689999999998874 99999975310 011 2345666677776655433 2345799999999
Q ss_pred HHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000777 1191 VAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVIVEK 1261 (1288)
Q Consensus 1191 laiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~ 1261 (1288)
++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998743 7899999999999988999999999999874
No 376
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=337.78 Aligned_cols=219 Identities=27% Similarity=0.487 Sum_probs=185.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
+++.+++++|++ ...+++|+||+++.||++||.|||||||||++++|..++.|++|.|++||.|... ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 688999999974 3458999999999999999999999999999999999999999999999999865 4556788999
Q ss_pred EEcCCCCCC-chhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000777 464 LVSQEPVLF-TGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPR 542 (1288)
Q Consensus 464 ~v~Q~~~l~-~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~ 542 (1288)
+++-+..|+ ..|++|||.|...-....+.+..++ +.+..+.| |++..+..+..++|-|+||||+|||||++||+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kar---i~~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~ 153 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKAR---IAELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPS 153 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHH---HHHHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCC
Confidence 999777777 5699999998533111111111222 22333444 56666677778999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 543 ILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 543 illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+++||||||+||..+.+.+.+.+..++. ++++|+.||.++.++. ||+|+++.+|+++..|+.+++.+.
T Consensus 154 i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 154 ILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred eEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999876 7999999999999986 999999999999999999988654
No 377
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=8.5e-41 Score=366.51 Aligned_cols=211 Identities=27% Similarity=0.530 Sum_probs=177.1
Q ss_pred EEEEeEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 384 IELRDVYFSYPARPN-EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~-~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
++++|++++|+.... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ...++++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999964211 269999999999999999999999999999999999999999999999999875 345667899
Q ss_pred EEEcCCCCCCch-hHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLFTG-SIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+|++|++.+|.. |++||+.+.... ...++... .+.+.++.+ |++......+.+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999874 999999864221 11211111 123344554 66666677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999999875 46899999999999876 9999999999998754
No 378
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=375.87 Aligned_cols=215 Identities=28% Similarity=0.505 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccC--CCHHHHhcc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQK--LQLKWLRQQ 1120 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 1120 (1288)
|+++||+++|+. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2369999999999999999999999999999999999999999999999999852 234568899
Q ss_pred eEEEccCC--CCchhhHHHHHhcCCCC-CCCH----HHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1121 MGLVSQEP--VLFNDTIRANIAYGKGG-DATE----AEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1121 i~~V~Qd~--~Lf~gTIreNl~~g~~~-~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
|+|+||+| .+|..|++||+.++... ..+. +++.++++..++.++. ......||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-----------NKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-----------cCChhhCCHHHHHHHHH
Confidence 99999998 57889999999864211 1222 3455666666664332 23356899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|||++++|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999875 999999999999999999998764
No 379
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=374.01 Aligned_cols=222 Identities=32% Similarity=0.457 Sum_probs=190.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCceEEECCeeccC--CCH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP-----DAGHITLDGVEIQK--LQL 1114 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1114 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 5999999999963 3699999999999999999999999999999999999864 58999999999864 344
Q ss_pred HHHhcceEEEccCCCCchhhHHHHHhcCCCC-C---CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHH
Q 000777 1115 KWLRQQMGLVSQEPVLFNDTIRANIAYGKGG-D---ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQR 1190 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~-~---~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQr 1190 (1288)
..+|++|+|+||++.+|+.|++||+.++... . ..++++.++++.+++.+.+.. .....+..||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 5678999999999999989999999875210 0 123455667777777654432 2345567899999999
Q ss_pred HHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEEEEEe---------CCEEEE
Q 000777 1191 VAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMIAVVK---------NGVIVE 1260 (1288)
Q Consensus 1191 laiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~---------~G~Ive 1260 (1288)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998778899999999999965 99999997 899999
Q ss_pred ecChhhhhcCCCc
Q 000777 1261 KGKHENLINIPDG 1273 (1288)
Q Consensus 1261 ~Gt~~eLl~~~~g 1273 (1288)
.|+++++...+.-
T Consensus 250 ~g~~~~~~~~~~~ 262 (274)
T PRK14265 250 FSPTEQMFGSPQT 262 (274)
T ss_pred eCCHHHHHhCCCC
Confidence 9999999876443
No 380
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=374.41 Aligned_cols=221 Identities=33% Similarity=0.514 Sum_probs=186.2
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCC--C
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKE--F 453 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~ 453 (1288)
.+.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 356999999999963 4699999999999999999999999999999999999884 89999999999864 3
Q ss_pred CHHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 454 QLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 454 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
+...+|+.++|++|++.+|..|++||+.++... . .. +++.++++..++.+ .+.+..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWD-------EVKDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCh-------hHHHHhhCCcccCCHH
Confidence 455678899999999999988999999875321 1 11 12333333333322 1223456778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChh
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 605 (1288)
||||++|||||+++|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcCC
Q 000777 606 KLVEDP 611 (1288)
Q Consensus 606 ~l~~~~ 611 (1288)
++...+
T Consensus 253 ~~~~~~ 258 (272)
T PRK14236 253 TLFTSP 258 (272)
T ss_pred HHhcCC
Confidence 987653
No 381
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=374.87 Aligned_cols=219 Identities=31% Similarity=0.529 Sum_probs=184.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 3789999999963 24599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEcCCC--CCCchhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 463 GLVSQEP--VLFTGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 463 ~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
+||+|+| .+|..|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+..||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 3678899999987532 122221111 112233333 3433445566799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
.+|++|||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999998764 6899999999999865 999999999999999999999764
No 382
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=369.07 Aligned_cols=219 Identities=22% Similarity=0.385 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 461 (1288)
.++++|++++|+. +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999962 46999999999999999999999999999999999999999999999999998877543 6778
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
++|++|++.+|. .|++||+.++......++.... +.+.++.++ +++........+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 999999999987 4999999876432222222111 112222222 122223456779999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999999999998754 7899999999998765 999999999999999999998643
No 383
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.3e-40 Score=384.03 Aligned_cols=214 Identities=29% Similarity=0.476 Sum_probs=182.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+|++|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 36999999999999999999999999999999999999999999999999997654 5688999
Q ss_pred EEEccCCCCc-hhhHHHHHhcCC-CCCCCHHH----HHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLF-NDTIRANIAYGK-GGDATEAE----IQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf-~gTIreNl~~g~-~~~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
+|+||++.+| ..|++||+.+.. ....+.++ +.++++..++ ++..++. ..+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~~~~~----~~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKADAR----VSDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------chhhCCC----hhhCCHHHHHHHHHHH
Confidence 9999999886 579999997421 11122222 3334444443 2233444 4579999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||+.+|++|||||||++||+.+...+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 47899999999999976 999999999999999999999764
No 384
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=372.82 Aligned_cols=224 Identities=33% Similarity=0.502 Sum_probs=184.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 455 (1288)
.|+++|++|+|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 469999999999999999999999999999999999997 479999999999864 334
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..+++.++|++|++.+|..|++||+.++... . ..+ ++..+++..++++ +.....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHH
Confidence 5677889999999999999999999875321 1 111 1222222222210 011234567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++||||++++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999998
Q ss_pred hcCCCchHH
Q 000777 608 VEDPEGAYS 616 (1288)
Q Consensus 608 ~~~~~~~~~ 616 (1288)
...+...|.
T Consensus 234 ~~~~~~~~~ 242 (251)
T PRK14251 234 FIAPKKQIT 242 (251)
T ss_pred HhCCCCHHH
Confidence 765444343
No 385
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.1e-40 Score=384.18 Aligned_cols=231 Identities=23% Similarity=0.410 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC---CcEEEECCeeCCCCCHHHH
Q 000777 383 DIELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ---AGEVLIDGINLKEFQLQWI 458 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~ 458 (1288)
.++++|++++|+.+. ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996322 246999999999999999999999999999999999999996 9999999999998876654
Q ss_pred ---h-cceEEEcCCC--CCCc-hhHHHHHhcCC---CCCCHHHHHHHHHHcCHHHHHH--hCCCCccccccCCCCCCChH
Q 000777 459 ---R-KKIGLVSQEP--VLFT-GSIKDNIAYGK---DDATTEEIRVATELANAAKFID--KLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 459 ---r-~~i~~v~Q~~--~l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~--~l~~g~~t~~~~~g~~LSgG 526 (1288)
| +.|+||||+| .++. .|+.+|+.... ...+.++..+. +.+.++ .+|++. ..++..+.+||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~-----~~~~L~~vgL~~~~-~~~~~~p~~LSgG 165 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE-----SVRMLDAVKMPEAR-KRMKMYPHEFSGG 165 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCCChH-HHhcCCcccCCHH
Confidence 3 4899999998 3543 47777775321 11222222111 111222 234322 3367788999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecC
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 603 (1288)
||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|++.|+
T Consensus 166 ~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~ 245 (330)
T PRK09473 166 MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGN 245 (330)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999998865 6899999999999975 99999999999999999
Q ss_pred hhHHhcCCCchHHHHH
Q 000777 604 HSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 604 ~~~l~~~~~~~~~~~~ 619 (1288)
++++.+++...|.+..
T Consensus 246 ~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 246 ARDVFYQPSHPYSIGL 261 (330)
T ss_pred HHHHHhCCCCHHHHHH
Confidence 9999988777887643
No 386
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-40 Score=362.35 Aligned_cols=202 Identities=30% Similarity=0.494 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5789999999632 2 39999999999999999999999999999999999999999999999977654 467899
Q ss_pred EEccCCCCchh-hHHHHHhcCCCCC-----CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKGGD-----ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|.+ |++||+.++.... .+++++.++++..++.++.... ...||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHHH
Confidence 99999999975 9999998652211 1345677788877776554332 35799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
++++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999966 9999999999998865
No 387
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=373.19 Aligned_cols=221 Identities=26% Similarity=0.441 Sum_probs=183.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHH-hcc
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWL-RQQ 1120 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~ 1120 (1288)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988776554 456
Q ss_pred eEEEccCCCCchh-hHHHHHhcCCCCC--------------CCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCCh
Q 000777 1121 MGLVSQEPVLFND-TIRANIAYGKGGD--------------ATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSG 1185 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~g-TIreNl~~g~~~~--------------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1185 (1288)
++|+||++.+|.+ |++||+.++.... ..++ ..+. ...+.++++.+ |++........+|||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~ 156 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRA-ESEA--LDRAATWLERV--GLLEHANRQAGNLAY 156 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccc-hhHH--HHHHHHHHHhC--ChhhhhhCChhhCCH
Confidence 9999999999975 9999998752100 0000 0000 01122333332 455555667789999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
|||||++||||++.+|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 157 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 236 (255)
T PRK11300 157 GQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANG 236 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecC
Confidence 999999999999999999999999999999999999999998753 6899999999999866 9999999999999999
Q ss_pred ChhhhhcC
Q 000777 1263 KHENLINI 1270 (1288)
Q Consensus 1263 t~~eLl~~ 1270 (1288)
+++++...
T Consensus 237 ~~~~~~~~ 244 (255)
T PRK11300 237 TPEEIRNN 244 (255)
T ss_pred CHHHHhhC
Confidence 99998764
No 388
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=379.11 Aligned_cols=221 Identities=30% Similarity=0.523 Sum_probs=189.8
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCceEEECCeeccC--CC
Q 000777 1041 GEIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-----PDAGHITLDGVEIQK--LQ 1113 (1288)
Q Consensus 1041 g~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1113 (1288)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35999999999964 369999999999999999999999999999999999986 689999999999865 34
Q ss_pred HHHHhcceEEEccCCCCchhhHHHHHhcCCCC------------------CCCHHHHHHHHHHhchhHHHHhhhcccccc
Q 000777 1114 LKWLRQQMGLVSQEPVLFNDTIRANIAYGKGG------------------DATEAEIQAASEMANAHKFICSLQQGYDTM 1175 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~gTIreNl~~g~~~------------------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ 1175 (1288)
...+|++++|+||++.+|++|++||+.++... ...++++.++++.+++.+. +++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDE-------VNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchh-------hhHH
Confidence 66788999999999999999999999864210 0113345666666665433 3344
Q ss_pred ccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhh-cCEE-EEE
Q 000777 1176 VGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKN-ADMI-AVV 1253 (1288)
Q Consensus 1176 vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~DrI-~vl 1253 (1288)
++..+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56778899999999999999999999999999999999999999999999998777899999999999865 9997 567
Q ss_pred eCCEEEEecChhhhhcCC
Q 000777 1254 KNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1254 ~~G~Ive~Gt~~eLl~~~ 1271 (1288)
++|++++.|+++++++.+
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999998653
No 389
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=376.53 Aligned_cols=220 Identities=33% Similarity=0.576 Sum_probs=184.7
Q ss_pred EEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCC----CHHH
Q 000777 384 IELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEF----QLQW 457 (1288)
Q Consensus 384 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 457 (1288)
|+++||+++|++.. .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996421 14699999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhcceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000777 458 IRKKIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 458 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 532 (1288)
+|+.|+|++|++ .+|+.|++||+.++... .+.++..+. +.+.++.+ |++ ......+.+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 57888999999875321 222222211 12334444 554 3456777899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999998754 6899999999999865 999999999999999999988654
No 390
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=383.43 Aligned_cols=230 Identities=27% Similarity=0.393 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC----CCCcEEEECCeeCCCCCHHH
Q 000777 383 DIELRDVYFSYPARPN-EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD----PQAGEVLIDGINLKEFQLQW 457 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 457 (1288)
-++++|++++|+.+.. ..+|+||||+|++||+++|||+||||||||+++|+|+++ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999964322 469999999999999999999999999999999999997 48999999999998887665
Q ss_pred Hh----cceEEEcCCCC--CCc-hhHHHHHhcCC---CCCCHHHHHHHHHHcCHHHHHHhCCCCcc---ccccCCCCCCC
Q 000777 458 IR----KKIGLVSQEPV--LFT-GSIKDNIAYGK---DDATTEEIRVATELANAAKFIDKLPQGID---TLVGEHGTQLS 524 (1288)
Q Consensus 458 ~r----~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~g~~LS 524 (1288)
++ +.|+||||+|. ++. .|+.+++.... .....++..+ .+.+.++.+ |++ ...+..+.+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~-----~~~~~L~~~--gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQ-----RAIDLLNQV--GIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChHHHHhCCchhCC
Confidence 43 37999999995 342 36665554211 0112111111 122334443 443 34567788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEe
Q 000777 525 GGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEK 601 (1288)
Q Consensus 525 gGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 601 (1288)
|||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999864 6899999999999965 999999999999999
Q ss_pred cChhHHhcCCCchHHHHH
Q 000777 602 GTHSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 602 g~~~~l~~~~~~~~~~~~ 619 (1288)
|+++++.+++...|.+.+
T Consensus 236 g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CCHHHHhhCCCChHHHHH
Confidence 999999988777776543
No 391
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=372.16 Aligned_cols=223 Identities=35% Similarity=0.515 Sum_probs=184.0
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcC---CCC--CCcEEEECCeeCCCC--CH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERF---YDP--QAGEVLIDGINLKEF--QL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~---~~~--~~G~i~~~g~~~~~~--~~ 455 (1288)
.++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 4699999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CHHHHHHHHHHcCHHHHHHhC--CCCccccccCCCCCCChHHHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TTEEIRVATELANAAKFIDKL--PQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
..+++.++|+||++.+|..|++||+.++... . ..++.... +.+.++.+ ++.+.+.....+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQR-----VEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 5677899999999999988999999875321 1 11111111 11223322 1122344567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999999998777899999999999865 99999999999999999999987
Q ss_pred CCCc
Q 000777 610 DPEG 613 (1288)
Q Consensus 610 ~~~~ 613 (1288)
++..
T Consensus 235 ~~~~ 238 (250)
T PRK14245 235 NPEK 238 (250)
T ss_pred CCCC
Confidence 6443
No 392
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=373.31 Aligned_cols=221 Identities=30% Similarity=0.481 Sum_probs=183.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 455 (1288)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 21 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 599999999996 3469999999999999999999999999999999999864 799999999999864 334
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCCC---CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA---TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..++++++|++|++.+|..|++||+.++.... .. +.+.++++..++. .++....+..+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALW-------DEVKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCC-------cchHHHHhcCcccCCHHHH
Confidence 46778999999999999899999998753211 11 1122222222211 1112345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998865 999999999999999999998
Q ss_pred hcCCCc
Q 000777 608 VEDPEG 613 (1288)
Q Consensus 608 ~~~~~~ 613 (1288)
..++..
T Consensus 251 ~~~~~~ 256 (268)
T PRK14248 251 FTSPKQ 256 (268)
T ss_pred HhCCCC
Confidence 765443
No 393
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=370.48 Aligned_cols=224 Identities=29% Similarity=0.472 Sum_probs=185.5
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC--C---CCcEEEECCeeCCCC--C
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD--P---QAGEVLIDGINLKEF--Q 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~--~---~~G~i~~~g~~~~~~--~ 454 (1288)
+.|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++... +
T Consensus 3 ~~l~~~nl~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFG---KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 5699999999996 2469999999999999999999999999999999999986 4 689999999998643 3
Q ss_pred HHHHhcceEEEcCCCCCCc-hhHHHHHhcCCCC---CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 455 LQWIRKKIGLVSQEPVLFT-GSIKDNIAYGKDD---ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
...+++.++|+||++.+|. .|++||+.++... .+. +++.++++..++.+. +....+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDE-------VKDRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcCcCCHH
Confidence 4567889999999999887 6999999875221 111 122233333332221 122345677899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChh
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 605 (1288)
||||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcCCCchH
Q 000777 606 KLVEDPEGAY 615 (1288)
Q Consensus 606 ~l~~~~~~~~ 615 (1288)
++...+...|
T Consensus 233 ~~~~~~~~~~ 242 (252)
T PRK14256 233 KIFTTPEKKQ 242 (252)
T ss_pred HHHhCCCcHH
Confidence 9977654443
No 394
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=372.88 Aligned_cols=222 Identities=30% Similarity=0.481 Sum_probs=186.6
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--C
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--F 453 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~ 453 (1288)
...|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 18 ~~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 34699999999995 3569999999999999999999999999999999999996 589999999999864 3
Q ss_pred CHHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChH
Q 000777 454 QLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGG 526 (1288)
Q Consensus 454 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 526 (1288)
+...+++.|+|+||++.+|..|++||+.++... . .. +++.++++..++.+ ++++..+..+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWD-------QVKDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCc-------hhhhhhcCCcccCCHH
Confidence 455678899999999999989999999875321 1 11 12222333333221 2234567788899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChh
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 605 (1288)
||||++||||++++|++|||||||++||+.+.+.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcCCC
Q 000777 606 KLVEDPE 612 (1288)
Q Consensus 606 ~l~~~~~ 612 (1288)
++...+.
T Consensus 248 ~~~~~~~ 254 (267)
T PRK14237 248 NIFTNPK 254 (267)
T ss_pred HHhcCCC
Confidence 9876533
No 395
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=373.66 Aligned_cols=220 Identities=30% Similarity=0.596 Sum_probs=186.5
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++++|++ .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 5899999999963 235799999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 463 GLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 463 ~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
+|++|+| .++..|++||+.++... .+.++... .+.+.++.+ |++........+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 35577999999875321 22222211 122334444 5555556677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+.+++.+.
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998764 4799999999999878999999999999999999888654
No 396
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=365.86 Aligned_cols=210 Identities=32% Similarity=0.505 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|+. . ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 2 249999999999999999999999999999999999999999999999977654 357899
Q ss_pred EEccCCCCchh-hHHHHHhcCCCC-----CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKGG-----DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|.+ |++||+.++... ...++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 999999864211 112456777888888766654433 4799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999865 999999999999999999999875
No 397
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=371.44 Aligned_cols=222 Identities=31% Similarity=0.456 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 455 (1288)
.|+++||+++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999963 469999999999999999999999999999999999986 489999999999853 345
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCCC--C---HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA--T---TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
..++++|+|++|++.+|+.|++||+.++.... . .+++.++++.+++.+.+ +...+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 66788999999999999889999998764311 1 12233334444443322 223466778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe---------CCEEeE
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIH---------RGKIVE 600 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~---------~G~i~~ 600 (1288)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999876 99999998 899999
Q ss_pred ecChhHHhcCCCch
Q 000777 601 KGTHSKLVEDPEGA 614 (1288)
Q Consensus 601 ~g~~~~l~~~~~~~ 614 (1288)
.|+++++.+.+...
T Consensus 240 ~~~~~~~~~~~~~~ 253 (264)
T PRK14243 240 FDRTEKIFNSPQQQ 253 (264)
T ss_pred eCCHHHHHhCCCcH
Confidence 99999998764433
No 398
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.5e-40 Score=365.38 Aligned_cols=205 Identities=30% Similarity=0.461 Sum_probs=174.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH---HHhc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK---WLRQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 1119 (1288)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999877644 3788
Q ss_pred ceEEEccCCCC-chhhHHHHHhcCCC-CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1120 QMGLVSQEPVL-FNDTIRANIAYGKG-GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1120 ~i~~V~Qd~~L-f~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
.++|+||+|.+ +..|++||+.++.. ...+++ ++.++++..++.++. ......||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKA-----------KNFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCchhCCHHHHHHHHH
Confidence 99999999986 46799999986421 112332 345556665554432 33456899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEE
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVE 1260 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive 1260 (1288)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 46899999999999976 89999999999853
No 399
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=374.88 Aligned_cols=218 Identities=33% Similarity=0.588 Sum_probs=185.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC-HHHHhcce
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ-LQWIRKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~r~~i 462 (1288)
++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999952 346999999999999999999999999999999999999999999999999998765 35677899
Q ss_pred EEEcCCCC--CCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 463 GLVSQEPV--LFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 463 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
+|++|+|. ++..|++|||.++... .+..+..+. +.+.++.+ |++......+.+||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5678999999876322 222222111 12334444 5555566777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
.+|+||||||||++||+.++..+.+.++++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999988754 7899999999999977999999999999999999988654
No 400
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.3e-40 Score=369.07 Aligned_cols=221 Identities=24% Similarity=0.448 Sum_probs=187.1
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcce
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 462 (1288)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 46999999999999999999999999999999999999999999999999998776654 35679
Q ss_pred EEEcCCCCCCch-hHHHHHhcCCCCCCH--HH---HHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 463 GLVSQEPVLFTG-SIKDNIAYGKDDATT--EE---IRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 463 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~--~~---~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
+|++|++.+|.+ |++||+.++...... .. .........+.+.++.+ |++........+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999976 999999875321000 00 00001111234455555 66666778888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
++.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998777899999999999976 99999999999999999988864
No 401
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.3e-40 Score=361.99 Aligned_cols=203 Identities=26% Similarity=0.458 Sum_probs=173.9
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ..+++.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 47899999995 34699999999999999999999999999999999999999999999999988654 45677899
Q ss_pred EEcCCCCCC-chhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLF-TGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
||+|++.++ +.|++||+.++.. ..+.+++.++++..++. ......+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLK-----------DSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH-----------HHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 999999887 5799999987532 12334444454544443 334455678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999988764 6899999999999876 9999999999998765
No 402
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=371.37 Aligned_cols=221 Identities=29% Similarity=0.456 Sum_probs=183.5
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC--CC---CCcEEEECCeeCCCC--CH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFY--DP---QAGEVLIDGINLKEF--QL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~--~~---~~G~i~~~g~~~~~~--~~ 455 (1288)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|++ +| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 46999999999999999999999999999999999995 36 599999999998643 34
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..+++.++||||++.+|+.|++||+.++... . .. +++.++++..++.+ ++.+..+..+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWD-------EVKDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCch-------hHHHHHhcCcccCCHHHH
Confidence 5677889999999999999999999875211 1 11 11222233322211 123445677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999998865 999999999999999999999
Q ss_pred hcCCCc
Q 000777 608 VEDPEG 613 (1288)
Q Consensus 608 ~~~~~~ 613 (1288)
.+.+..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14239 235 FMNPKH 240 (252)
T ss_pred HhCCCC
Confidence 766443
No 403
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.4e-40 Score=349.99 Aligned_cols=172 Identities=40% Similarity=0.712 Sum_probs=162.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++. ..++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 246999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEccCCCCchhhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCC
Q 000777 1123 LVSQEPVLFNDTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPK 1202 (1288)
Q Consensus 1123 ~V~Qd~~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ 1202 (1288)
|++|++.+|++|++||+ ||||||||++||||++++|+
T Consensus 80 ~~~q~~~~~~~tv~~~l-------------------------------------------LS~G~~qrv~la~al~~~p~ 116 (173)
T cd03246 80 YLPQDDELFSGSIAENI-------------------------------------------LSGGQRQRLGLARALYGNPR 116 (173)
T ss_pred EECCCCccccCcHHHHC-------------------------------------------cCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999997 99999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 1203 ILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKNADMIAVVKNGVI 1258 (1288)
Q Consensus 1203 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1258 (1288)
+|||||||++||+.+...+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 117 ~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 117 ILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999999875 47899999999999988999999999974
No 404
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=372.52 Aligned_cols=220 Identities=31% Similarity=0.554 Sum_probs=184.9
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCC--------
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEF-------- 453 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~-------- 453 (1288)
+.++++|+++.|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999963 4699999999999999999999999999999999999999999999999988542
Q ss_pred -----CHHHHhcceEEEcCCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccc-cCCCCCC
Q 000777 454 -----QLQWIRKKIGLVSQEPVLFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLV-GEHGTQL 523 (1288)
Q Consensus 454 -----~~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~L 523 (1288)
....++++++|+||++.+|. .|++||+.++.. .....+... .+.+.++.+ |+.... ...+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARE-----RAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccC
Confidence 13456789999999999986 599999986421 111111111 122344554 555543 6677899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEe
Q 000777 524 SGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEK 601 (1288)
Q Consensus 524 SgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 601 (1288)
|||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999998864 7899999999999986 999999999999999
Q ss_pred cChhHHhcCC
Q 000777 602 GTHSKLVEDP 611 (1288)
Q Consensus 602 g~~~~l~~~~ 611 (1288)
|+++++...+
T Consensus 234 ~~~~~~~~~~ 243 (257)
T PRK10619 234 GAPEQLFGNP 243 (257)
T ss_pred CCHHHhhhCc
Confidence 9999987653
No 405
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=377.18 Aligned_cols=221 Identities=29% Similarity=0.552 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCC----CHH
Q 000777 383 DIELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEF----QLQ 456 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~ 456 (1288)
.|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 24699999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhcceEEEcCCC--CCCchhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHHHH
Q 000777 457 WIRKKIGLVSQEP--VLFTGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri 531 (1288)
..++.|+|++|+| .+|..|++|||.++.. ....++..+ .+.+.++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 5677899999998 5778899999987532 122222211 123344554 665 345677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++. ++.|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999885 46899999999999865 99999999999999999998865
Q ss_pred C
Q 000777 610 D 610 (1288)
Q Consensus 610 ~ 610 (1288)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 3
No 406
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=369.44 Aligned_cols=221 Identities=31% Similarity=0.510 Sum_probs=185.7
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeeCCCC--C
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ-----AGEVLIDGINLKEF--Q 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~~--~ 454 (1288)
+.++++|++|+|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 3 ~~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 79 (251)
T PRK14249 3 PKIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLD 79 (251)
T ss_pred ceEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccC
Confidence 35899999999963 46999999999999999999999999999999999999997 69999999998643 3
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--CC-HHH----HHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--AT-TEE----IRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
...+|+.++||+|++.+|+.|++||+.++... .. .++ +.++.+..++. +++....+..+.+|||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~Gq 152 (251)
T PRK14249 80 VVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALW-------DEVKDNLHKSGLALSGGQ 152 (251)
T ss_pred hHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCc-------hhhhhHhhCCcccCCHHH
Confidence 45678899999999999989999999876321 11 111 22222222222 123344667888999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhH
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 153 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 153 QQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999988667899999999999876 89999999999999999999
Q ss_pred HhcCCC
Q 000777 607 LVEDPE 612 (1288)
Q Consensus 607 l~~~~~ 612 (1288)
+...+.
T Consensus 233 ~~~~~~ 238 (251)
T PRK14249 233 IFSRPR 238 (251)
T ss_pred HHhCCC
Confidence 876543
No 407
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=373.11 Aligned_cols=223 Identities=26% Similarity=0.467 Sum_probs=185.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 455 (1288)
.++++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 469999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCC--CCCHH-HHHHHHHHcCHHHHHHhC--CCCccccccCCCCCCChHHHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKD--DATTE-EIRVATELANAAKFIDKL--PQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~-~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
..+++.++|++|++.+|..|++||+.++.. ...++ ..... +.+.++.+ .+++....+..+.+||||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qr 175 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEI-----VEKSLRGAAIWDELKDRLHDNAYGLSGGQQQR 175 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCcchHHHHHhcCcccCCHHHHHH
Confidence 567889999999999998899999987532 11111 11111 11112221 1233445567888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 176 v~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 255 (271)
T PRK14238 176 LCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFS 255 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998777899999999999876 99999999999999999999976
Q ss_pred CCCc
Q 000777 610 DPEG 613 (1288)
Q Consensus 610 ~~~~ 613 (1288)
++..
T Consensus 256 ~~~~ 259 (271)
T PRK14238 256 NPSD 259 (271)
T ss_pred CCCC
Confidence 6443
No 408
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=373.64 Aligned_cols=213 Identities=28% Similarity=0.473 Sum_probs=182.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 4699999999999999999999999999999999999999999999999999887777888899
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCCC-------C---HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDDA-------T---TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 531 (1288)
+|++|++.++. .|++||+.++.... . .+++..+++..++ +........+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGL-----------KPLAHRLVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCC-----------HHHhcCCcccCCHHHHHHH
Confidence 99999987665 59999999753210 1 1223334444433 3334455578999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
+|||||+.+|+||||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999999998853 6899999999999865 9999999999999999998876
Q ss_pred c
Q 000777 609 E 609 (1288)
Q Consensus 609 ~ 609 (1288)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 409
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=378.15 Aligned_cols=222 Identities=28% Similarity=0.502 Sum_probs=183.7
Q ss_pred ccEEEEeEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC----C-C
Q 000777 382 GDIELRDVYFSYPARP--NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE----F-Q 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~----~-~ 454 (1288)
+.|+++|++++|+.+. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 5799999999996432 1359999999999999999999999999999999999999999999999999852 2 3
Q ss_pred HHHHhcceEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHH
Q 000777 455 LQWIRKKIGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkq 529 (1288)
...+|+.|+|++|+| .+|..|++||+.++... ...++..+. +.+.++.+ |+. ...+..+.+|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLV--QLPEDYVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCChhhCCHHHHH
Confidence 456788999999998 46778999999876321 222222111 12233333 442 3456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhH
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998753 6899999999999865 99999999999999999998
Q ss_pred HhcC
Q 000777 607 LVED 610 (1288)
Q Consensus 607 l~~~ 610 (1288)
+.+.
T Consensus 238 ~~~~ 241 (289)
T PRK13645 238 IFSN 241 (289)
T ss_pred HhcC
Confidence 8654
No 410
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=4.2e-40 Score=369.96 Aligned_cols=228 Identities=28% Similarity=0.458 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCee-----ccCCCHHH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVE-----IQKLQLKW 1116 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~~~~ 1116 (1288)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 369999999999999999999999999999999999999999999999998 87766544
Q ss_pred ----HhcceEEEccCCC--Cc-hhhHHHHHhcCC--CCCCCHHHHHHHHHHhchhHHHHhhhcccc-ccccCCCCCCChh
Q 000777 1117 ----LRQQMGLVSQEPV--LF-NDTIRANIAYGK--GGDATEAEIQAASEMANAHKFICSLQQGYD-TMVGERGLQLSGG 1186 (1288)
Q Consensus 1117 ----lR~~i~~V~Qd~~--Lf-~gTIreNl~~g~--~~~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgG 1186 (1288)
+|+.++||||++. ++ ..|+.+|+.+.. .......++.+ .+.+++..+ |++ +..+..+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3667999999984 33 357888885321 00111122211 123444444 232 3456778899999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGK 1263 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt 1263 (1288)
||||++|||||+++|+||||||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998754 7899999999999975 99999999999999999
Q ss_pred hhhhhcCCCcHHHHHH
Q 000777 1264 HENLINIPDGFYASLI 1279 (1288)
Q Consensus 1264 ~~eLl~~~~g~y~~L~ 1279 (1288)
++++..++...|.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~ 251 (258)
T PRK11701 236 TDQVLDDPQHPYTQLL 251 (258)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 9999876555565443
No 411
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.5e-40 Score=365.71 Aligned_cols=213 Identities=35% Similarity=0.540 Sum_probs=173.6
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH---HHHh
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL---KWLR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR 1118 (1288)
|+++||+++|++.. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996421 1269999999999999999999999999999999999999999999999999987763 5788
Q ss_pred cceEEEccCC--CCc-hhhHHHHHhcCCC---CCCCHHHHHHHHHHhchhHHHHhhhcccc-ccccCCCCCCChhHHHHH
Q 000777 1119 QQMGLVSQEP--VLF-NDTIRANIAYGKG---GDATEAEIQAASEMANAHKFICSLQQGYD-TMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1119 ~~i~~V~Qd~--~Lf-~gTIreNl~~g~~---~~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgGQrQrl 1191 (1288)
++++|+||++ .++ ..|+++|+.++.. ....+++...+. .+.+..+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 5799999975311 111112111110 1222222 232 234556678999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1262 (1288)
+|||||+.+|++|||||||++||+++...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998764 789999999999997 59999999999998865
No 412
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=368.55 Aligned_cols=218 Identities=23% Similarity=0.455 Sum_probs=186.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 461 (1288)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3789999999963 46999999999999999999999999999999999999999999999999998776544 5678
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCC---CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDD---ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
++|++|++.+|. .|++||+.++... .+.++. ...+.+.++.+ |++........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 999999998887 5999999875321 111111 11233456666 666667778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+.+|++|||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 999999999999999999999999999988754 7899999999988865 999999999999999999988653
No 413
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=375.26 Aligned_cols=217 Identities=26% Similarity=0.488 Sum_probs=184.3
Q ss_pred cEEEEeEEEECCCCC---CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCC-HHHH
Q 000777 383 DIELRDVYFSYPARP---NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQ-LQWI 458 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~---~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~ 458 (1288)
-++++|++++|++.. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999996421 246999999999999999999999999999999999999999999999999987643 3456
Q ss_pred hcceEEEcCCCC--CCchhHHHHHhcCCCC--CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000777 459 RKKIGLVSQEPV--LFTGSIKDNIAYGKDD--ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 459 r~~i~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
++.++|+||+|. ++..|+.+|+.|+... .+. +++.++++.. |+.........+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKV-----------GMYEYRRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHH
Confidence 789999999984 6777999999986321 122 2233333333 44444555667999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHh
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999998853 68999999999998779999999999999999999987
Q ss_pred cC
Q 000777 609 ED 610 (1288)
Q Consensus 609 ~~ 610 (1288)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 414
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-40 Score=373.95 Aligned_cols=221 Identities=30% Similarity=0.547 Sum_probs=186.4
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC---cEEEECCeeCCCCCHHHH
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQA---GEVLIDGINLKEFQLQWI 458 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~---G~i~~~g~~~~~~~~~~~ 458 (1288)
+.|+++|++|+|+.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999632 3469999999999999999999999999999999999999998 899999999987777777
Q ss_pred hcceEEEcCCCC--CCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 459 RKKIGLVSQEPV--LFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 459 r~~i~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
+++|+||+|+|. +++.|++|||.++.+. .+.++..+ .+.+.++.+ |+....+....+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5678999999876332 22222111 112223333 444455666689999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998754 6899999999999877999999999999999999988764
No 415
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=365.51 Aligned_cols=209 Identities=35% Similarity=0.517 Sum_probs=173.7
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
|+++|++++|+... .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996311 1469999999999999999999999999999999999999999999999998863 35689
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+||+|++.+|. .|++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999887 6999999875321 1111111 1122344444 55555566678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEe--CCEEeEecCh
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRN-ADMIAVIH--RGKIVEKGTH 604 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~--~G~i~~~g~~ 604 (1288)
+|+++||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999874 36899999999998865 99999999 7999988764
No 416
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-40 Score=366.68 Aligned_cols=214 Identities=26% Similarity=0.494 Sum_probs=179.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhcce
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 462 (1288)
|+++||++.|+. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999963 46999999999999999999999999999999999999999999999999998776544 46789
Q ss_pred EEEcCCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 463 GLVSQEPVLFTG-SIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 463 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
+|++|++.+|.. |++||+.++.......+ .+. ..+.++.+ ++++........+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~~-----~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRS-RKI-----PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcch-HHH-----HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999875 99999987643221110 000 11122222 12334456677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999998764 6899999999999986 999999999999999999887
No 417
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-40 Score=382.87 Aligned_cols=217 Identities=27% Similarity=0.506 Sum_probs=182.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|+ ++.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|+++...+ ...++.|
T Consensus 41 ~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 599999999996 346999999999999999999999999999999999999999999999999987644 4577899
Q ss_pred EEEcCCCCCC-chhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLF-TGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
||+||++.++ ..|++||+.+... .....+..+.+ .+.++.+ |++........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999887 5699999985321 11222221111 1233333 44444555667999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999998854 6899999999999976 999999999999999999998754
No 418
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=361.96 Aligned_cols=202 Identities=23% Similarity=0.458 Sum_probs=171.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
++++|++++|++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEccCCCCchh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFND-TIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|.+ |++||+.+... ...+ ++++.++++..++.+ .......+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSE-----------YANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChH-----------HHhCcHhhCCHHHHHHHHHHHH
Confidence 99999999874 99999975311 0111 233444555544433 3344567899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1262 (1288)
++.+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999875 46899999999999865 9999999999998865
No 419
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-40 Score=370.37 Aligned_cols=213 Identities=28% Similarity=0.446 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC--------CceEEECCeeccCCCH
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD--------AGHITLDGVEIQKLQL 1114 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~--------~G~I~idG~di~~i~~ 1114 (1288)
|+++|++++|.+ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 36999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEccCCC-CchhhHHHHHhcCCCCC------C---CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCC
Q 000777 1115 KWLRQQMGLVSQEPV-LFNDTIRANIAYGKGGD------A---TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLS 1184 (1288)
Q Consensus 1115 ~~lR~~i~~V~Qd~~-Lf~gTIreNl~~g~~~~------~---sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1184 (1288)
..+|+.++|+||++. +|..|++||+.++.... . .++.++++++..++ ++.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGA-----------TALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCc-----------HhhhcCCcccCC
Confidence 888889999999986 67899999998752111 1 12234555555544 444556677899
Q ss_pred hhHHHHHHHHHHHc---------CCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEE
Q 000777 1185 GGQKQRVAIARAIV---------KDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAV 1252 (1288)
Q Consensus 1185 gGQrQrlaiARALl---------r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~v 1252 (1288)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998754 689999999999996 4999999
Q ss_pred EeCCEEEEecChhhhhc
Q 000777 1253 VKNGVIVEKGKHENLIN 1269 (1288)
Q Consensus 1253 l~~G~Ive~Gt~~eLl~ 1269 (1288)
|++|+|++.|++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999975
No 420
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=369.85 Aligned_cols=225 Identities=28% Similarity=0.479 Sum_probs=187.1
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCC--CH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEF--QL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 455 (1288)
.|+++|++|+|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYG---EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEEC---CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 489999999996 34699999999999999999999999999999999999763 489999999999765 44
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCCC---CHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA---TTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
...++.++|++|++.+|+.|++||+.++.... ... ++.++++..++ .+++.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAAL-------WDEVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcC-------chhhHHHhhcChhhCCHHHH
Confidence 56778899999999999899999999863211 111 12222222222 22333456778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999975 999999999999999999998
Q ss_pred hcCCCchHHH
Q 000777 608 VEDPEGAYSQ 617 (1288)
Q Consensus 608 ~~~~~~~~~~ 617 (1288)
.+.+...+.+
T Consensus 236 ~~~~~~~~~~ 245 (253)
T PRK14261 236 FENPHEELTE 245 (253)
T ss_pred HhCCCcHHHH
Confidence 7654433443
No 421
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=368.79 Aligned_cols=220 Identities=32% Similarity=0.489 Sum_probs=184.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCC--CH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEF--QL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 455 (1288)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 589999999996 24699999999999999999999999999999999999875 799999999998643 34
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCCC---CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA---TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
...++.++|+||++.+|..|++||+.++.... .. +++.++++.+++.+ ++.......+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWD-------EVKDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHHH
Confidence 46678899999999999999999998753211 11 12223333333221 222345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999998
Q ss_pred hcCCC
Q 000777 608 VEDPE 612 (1288)
Q Consensus 608 ~~~~~ 612 (1288)
...+.
T Consensus 234 ~~~~~ 238 (251)
T PRK14270 234 FLEPQ 238 (251)
T ss_pred hcCCC
Confidence 76543
No 422
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.1e-40 Score=364.23 Aligned_cols=209 Identities=29% Similarity=0.523 Sum_probs=175.1
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW---IR 459 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~r 459 (1288)
++++||+++|+... .+++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996321 246999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -cceEEEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 460 -KKIGLVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 460 -~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
+.++|++|++.+|. .|++||+.++.. .....+..+ .+.++++.+ |++......+.+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 68999999999885 699999987421 111111111 122345555 6666667777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEe
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIV 599 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 599 (1288)
||+++|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999998853 68999999999998889999999999985
No 423
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.1e-40 Score=379.97 Aligned_cols=217 Identities=25% Similarity=0.454 Sum_probs=182.0
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999962 4699999999999999999999999999999999999999999999999998653 34567899
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
+|+||++.++. .|++||+.+... ..+..+....+ .+.++.+ |+.........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999998884 699999975321 12222222111 1233333 44444556667999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 46899999999999976 999999999999999999998654
No 424
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=367.49 Aligned_cols=205 Identities=32% Similarity=0.457 Sum_probs=175.7
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
..|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EARED 82 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCc
Confidence 35999999999963 46999999999999999999999999999999999999999999999998763 45678
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
++|++|++.+|. .|++||+.++.....++++.++ ++.+ |+.......+.+||||||||++|||||+++
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~---------l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~ 151 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQA---------LAAV--GLADRANEWPAALSGGQKQRVALARALIHR 151 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhcccchHHHHHHHH---------HHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999999886 6999999986432112233333 3333 454455667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChh
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 605 (1288)
|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 152 PGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999998874 36899999999999865 9999999999999988765
No 425
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-40 Score=364.47 Aligned_cols=212 Identities=33% Similarity=0.558 Sum_probs=183.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++|++++|++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 478999999962 37999999999999999999999999999999999999999999999999987654 378999
Q ss_pred EEccCCCCch-hhHHHHHhcCCC-CCC----CHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKG-GDA----TEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|. .|++||+.++.. ... .++++.++++..++.+++. .....||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLN-----------RKPETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHh-----------cCcccCCHHHHHHHHHHHH
Confidence 9999999885 799999986421 111 2334566677777665543 3345799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1271 (1288)
++++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|++||++..+.. ||+|++|++|++++.|+++++.+.+
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999999998753 7899999999999875 9999999999999999999998754
No 426
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.3e-40 Score=378.94 Aligned_cols=216 Identities=22% Similarity=0.440 Sum_probs=186.4
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+++++|
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999996 3569999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EEcCCCCCCch-hHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLFTG-SIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|+||++.++.. |++||+.+.... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999865 999999863211 11121111 123445555 666667778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|++|||||||++||+.+.+.+++.++++.+++|+|++||+++.+.. ||||++|++|++++.|+++++...
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998778999999999999876 999999999999999999998653
No 427
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=384.45 Aligned_cols=212 Identities=28% Similarity=0.460 Sum_probs=184.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCC----CHHHHh
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKL----QLKWLR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~lR 1118 (1288)
|++ ||+++|.+ . .+ |+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999963 2 23 99999999999999999999999999999999999999999999998653 245578
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAI 1197 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1197 (1288)
++++||||++.+|. .|++||+.++.. ...++++.++++..++.++.. ....+||||||||++|||||
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~-~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qRvalaraL 143 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMA-KSMVAQFDKIVALLGIEPLLD-----------RYPGSLSGGEKQRVAIGRAL 143 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhh-hhhHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHHHHH
Confidence 89999999999996 699999998632 334567777888777755443 34468999999999999999
Q ss_pred cCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCC
Q 000777 1198 VKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPD 1272 (1288)
Q Consensus 1198 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1272 (1288)
+++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 999999999999999999999999999998764 6899999999998865 99999999999999999999998765
No 428
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=370.82 Aligned_cols=222 Identities=32% Similarity=0.541 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCCCC--HH
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKEFQ--LQ 456 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~~--~~ 456 (1288)
-+++|++|+|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 47899999995 3469999999999999999999999999999999999986 47999999999886543 33
Q ss_pred HHhcceEEEcCCCCCCchhHHHHHhcCCC--CC--CHHHHHHHHHHcCHHHHHHhCCCCcc----ccccCCCCCCChHHH
Q 000777 457 WIRKKIGLVSQEPVLFTGSIKDNIAYGKD--DA--TTEEIRVATELANAAKFIDKLPQGID----TLVGEHGTQLSGGQK 528 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~--~~~~~~~~~~~~~~~~~i~~l~~g~~----t~~~~~g~~LSgGqk 528 (1288)
.+|+.++|+||++.+|..|++||+.++.. .. ...+... .+.+.++.+ |+. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDE-----IVEKSLTSV--GLWEELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHH-----HHHHHHHHc--CCCchhhhHhhcChhhCCHHHH
Confidence 56789999999999998899999987521 11 1111111 112223333 332 345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999999
Q ss_pred hcCCCchH
Q 000777 608 VEDPEGAY 615 (1288)
Q Consensus 608 ~~~~~~~~ 615 (1288)
.+.+...+
T Consensus 236 ~~~~~~~~ 243 (251)
T PRK14244 236 FKNPQSSK 243 (251)
T ss_pred hcCCCChH
Confidence 87654433
No 429
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=368.82 Aligned_cols=224 Identities=32% Similarity=0.518 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCC--CH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEF--QL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 455 (1288)
.|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYG---EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeC---CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 489999999996 24699999999999999999999999999999999999984 899999999998653 23
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCC---CCHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD---ATTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..+++.++|++|++.+|..|++||+.++... ...+ ++.++++..++.+. ++...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDE-------VKSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCch-------hHHHHhCChhhcCHHHH
Confidence 4567889999999999999999999875311 1111 12233333332211 12345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++||||++.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998765 999999999999999999998
Q ss_pred hcCCCchHH
Q 000777 608 VEDPEGAYS 616 (1288)
Q Consensus 608 ~~~~~~~~~ 616 (1288)
.+.+...+.
T Consensus 233 ~~~~~~~~~ 241 (250)
T PRK14262 233 VERPKNKLT 241 (250)
T ss_pred HhCCCChHH
Confidence 765433333
No 430
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.6e-40 Score=349.85 Aligned_cols=178 Identities=34% Similarity=0.670 Sum_probs=164.6
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 4789999999642 24699999999999999999999999999999999999999999999999988765 556788999
Q ss_pred EEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000777 464 LVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRI 543 (1288)
Q Consensus 464 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~i 543 (1288)
|++|++++|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 468999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCEEeEec
Q 000777 544 LLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 544 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 602 (1288)
|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887788999999999999889999999999998754
No 431
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-41 Score=338.01 Aligned_cols=224 Identities=23% Similarity=0.451 Sum_probs=192.0
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH-Hhc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW-IRK 460 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~ 460 (1288)
+.+..+|+.++|. .++|++|+||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.|++.++... -|.
T Consensus 3 ~~L~a~~l~K~y~---kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYK---KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhC---CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 3578899999996 467999999999999999999999999999999999999999999999999999999765 467
Q ss_pred ceEEEcCCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000777 461 KIGLVSQEPVLFTG-SIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILK 539 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~ 539 (1288)
.|||.||+|.+|.. ||+|||..-.+... .......+...+++.++.+ ++.......+..||||||+|+.|||||..
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~~-~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIRE-KDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhhh-cchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhc
Confidence 99999999999965 99999986544221 1122233333344555666 67777888999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchh-hhhcCEEEEEeCCEEeEecChhHHhcCC
Q 000777 540 DPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLST-VRNADMIAVIHRGKIVEKGTHSKLVEDP 611 (1288)
Q Consensus 540 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~-~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 611 (1288)
+|+.++||||+|++||.+...|++.++.++. +--|++.-|+..+ +.-|||.+++.+|++...|+++|+.+++
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 9999999999999999999999999998864 5577777799875 5669999999999999999999999873
No 432
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.3e-40 Score=361.72 Aligned_cols=207 Identities=31% Similarity=0.545 Sum_probs=173.9
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999998765432 46899
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|++|++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999885 6999999875321 12222111 112334444 555556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999998753 6899999999999876 9999999999999875
No 433
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-40 Score=369.70 Aligned_cols=212 Identities=26% Similarity=0.497 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 78999999996 346999999999999999999999999999999999999999999999999998877777788899
Q ss_pred EEcCCCCCCch-hHHHHHhcCCCC-------CCH---HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000777 464 LVSQEPVLFTG-SIKDNIAYGKDD-------ATT---EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 464 ~v~Q~~~l~~~-ti~~ni~~~~~~-------~~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~ 532 (1288)
|++|++.++.. |++||+.++... ... +++.++++.. |++......+..||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT-----------RINHLADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc-----------CCHHHHcCCcccCCHHHHHHHH
Confidence 99999988865 999999986321 011 1222333333 4444455667899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
||||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 99999999999999999999999999999999988754 6899999999999875 99999999999999999988764
No 434
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.8e-40 Score=365.32 Aligned_cols=213 Identities=34% Similarity=0.534 Sum_probs=175.8
Q ss_pred EEEEeEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH---HHHh
Q 000777 384 IELRDVYFSYPARP-NEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL---QWIR 459 (1288)
Q Consensus 384 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r 459 (1288)
|+++||+++|+... ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996321 1269999999999999999999999999999999999999999999999999987663 5677
Q ss_pred cceEEEcCCCC--CC-chhHHHHHhcCCCCC---CHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000777 460 KKIGLVSQEPV--LF-TGSIKDNIAYGKDDA---TTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQRIA 532 (1288)
Q Consensus 460 ~~i~~v~Q~~~--l~-~~ti~~ni~~~~~~~---~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~ 532 (1288)
++++|++|++. ++ ..|++||+.++.... ..++..+.. ..+.++.+ |+. ......+.+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 89999999993 44 579999998642111 111111100 12344444 553 4567778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 533 IARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 533 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998864 6899999999999875 9999999999998754
No 435
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-40 Score=367.70 Aligned_cols=217 Identities=27% Similarity=0.479 Sum_probs=183.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|++++|+. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 3789999999963 4699999999999999999999999999999999999999999999999999887777777899
Q ss_pred EEEcCCCCC-CchhHHHHHhcCCCCC--CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc-
Q 000777 463 GLVSQEPVL-FTGSIKDNIAYGKDDA--TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL- 538 (1288)
Q Consensus 463 ~~v~Q~~~l-~~~ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~- 538 (1288)
+|++|++.+ +..|++||+.++.... ..++... .+.+.++.+ |++........+||||||||++|||||+
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~ 151 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA-----LVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQ 151 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH-----HHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999999987 5779999998763211 1111111 112233333 4544556667899999999999999999
Q ss_pred -----cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 539 -----KDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 539 -----~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 152 LWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred ccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999999875 36899999999999875 99999999999999999988865
No 436
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-41 Score=327.56 Aligned_cols=220 Identities=32% Similarity=0.551 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC----------
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE---------- 452 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~---------- 452 (1288)
.++++|++++|+ ...+|++|||+.++|+.+.|+|.|||||||+++||.=+..|+.|.|.++|..++-
T Consensus 6 ~l~v~dlHK~~G---~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhcc---cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 589999999996 3569999999999999999999999999999999999999999999999988731
Q ss_pred CC---HHHHhcceEEEcCCCCCC-chhHHHHHhcCCC---CCCH-HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCC
Q 000777 453 FQ---LQWIRKKIGLVSQEPVLF-TGSIKDNIAYGKD---DATT-EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLS 524 (1288)
Q Consensus 453 ~~---~~~~r~~i~~v~Q~~~l~-~~ti~~ni~~~~~---~~~~-~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 524 (1288)
.+ .+.+|.+.++|+|+..|+ ..||.||+.-+.- ..+. +.++. +..++.+. |+.......+..||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~------Ae~~L~kV--Gi~ek~~~YP~~LS 154 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIER------AEKYLAKV--GIAEKADAYPAHLS 154 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHH------HHHHHHHh--CchhhhhcCccccC
Confidence 12 345788999999999999 4699999874321 1122 22222 22344444 66666667778999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 525 GGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 525 gGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
|||+||+||||||..+|+++++|||||+|||+-.-++.+.++.+.+ +||.++|||.+.+.++ +.++++|.+|+|-|+|
T Consensus 155 GGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G 234 (256)
T COG4598 155 GGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEG 234 (256)
T ss_pred chHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccC
Confidence 9999999999999999999999999999999999999999999875 7999999999999988 9999999999999999
Q ss_pred ChhHHhcCCCc
Q 000777 603 THSKLVEDPEG 613 (1288)
Q Consensus 603 ~~~~l~~~~~~ 613 (1288)
+|+++..+|..
T Consensus 235 ~P~qvf~nP~S 245 (256)
T COG4598 235 PPEQVFGNPQS 245 (256)
T ss_pred ChHHHhcCCCC
Confidence 99999988654
No 437
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-40 Score=365.12 Aligned_cols=216 Identities=29% Similarity=0.490 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC------CCHHH
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE------FQLQW 457 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~------~~~~~ 457 (1288)
++++|++++|+. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 469999999999999999999999999999999999999999999999998731 23456
Q ss_pred HhcceEEEcCCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 458 IRKKIGLVSQEPVLFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 458 ~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
++++|+|++|++.+|. .|++||+.++.. ....++.. ..+.+.++.+ |++..+.....+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 6789999999999886 499999975311 11122111 1233455555 66666777788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
|||++.+|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999998764 6899999999999975 99999999999999999888754
No 438
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.4e-40 Score=361.74 Aligned_cols=202 Identities=34% Similarity=0.527 Sum_probs=171.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccC--CCHHHHhcc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQK--LQLKWLRQQ 1120 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 1120 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 369999999999999999999999999999999999999999999999999853 455678899
Q ss_pred eEEEccCCCCch-hhHHHHHhcCCC--CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1121 MGLVSQEPVLFN-DTIRANIAYGKG--GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1121 i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
++|+||++.+|. .|++||+.++.. ...+.+ ++.++++..++ +..+.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGL-----------ADKADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCC-----------HhHhhhCccccCHHHHHHHHH
Confidence 999999999886 699999976421 122222 33444444444 333444557899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVI 1258 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1258 (1288)
|||++++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999975 999999999975
No 439
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=371.32 Aligned_cols=220 Identities=27% Similarity=0.490 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999642 24699999999999999999999999999999999999999999999999999888877888899
Q ss_pred EEEcCCCC--CCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 463 GLVSQEPV--LFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 463 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
+|++|+|. ++..|+++|+.++... ...++..+. +.+.++.+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRR-----VSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 4466899999886432 122221111 12223333 4444455667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEecChhHHhcC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 6899999999999877999999999999999999998664
No 440
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.5e-40 Score=358.92 Aligned_cols=203 Identities=33% Similarity=0.504 Sum_probs=175.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
++++||+++|+. .++|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987644 4678899
Q ss_pred EEccCCCCch-hhHHHHHhcCCCC-----CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKGG-----DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
||||+|.+|. .|++||+.++... ...++++.++++..++.+...+. ..+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRL-----------PEQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCC-----------cccCCHHHHHHHHHHHH
Confidence 9999999987 5999999753111 11344667777777776554433 34799999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGK 1263 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt 1263 (1288)
++++|+++||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999865 99999999999999885
No 441
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=371.38 Aligned_cols=223 Identities=26% Similarity=0.493 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCCC-HH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEFQ-LQ 456 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~-~~ 456 (1288)
.++++||+++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFA---GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEEC---CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 589999999996 35699999999999999999999999999999999999986 6999999999987653 34
Q ss_pred HHhcceEEEcCCCCCCchhHHHHHhcCCCC---CCHHHHHHHHHHcCHHHHHHhC--CCCccccccCCCCCCChHHHHHH
Q 000777 457 WIRKKIGLVSQEPVLFTGSIKDNIAYGKDD---ATTEEIRVATELANAAKFIDKL--PQGIDTLVGEHGTQLSGGQKQRI 531 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkqri 531 (1288)
.++++++|++|++.+|+.|++||+.++... .+.++..... .+.++.+ +..+.+.+...+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 678899999999999999999999876321 2232222111 1222332 22223456677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 532 AIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 532 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988767899999999999876 999999999999999999999876
Q ss_pred CCc
Q 000777 611 PEG 613 (1288)
Q Consensus 611 ~~~ 613 (1288)
+..
T Consensus 253 ~~~ 255 (276)
T PRK14271 253 PKH 255 (276)
T ss_pred cCc
Confidence 433
No 442
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-40 Score=369.62 Aligned_cols=223 Identities=22% Similarity=0.433 Sum_probs=187.1
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH-hcc
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI-RKK 461 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-r~~ 461 (1288)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 489999999996 3569999999999999999999999999999999999999999999999999987775544 457
Q ss_pred eEEEcCCCCCCch-hHHHHHhcCCCCCCH----------HHH--HHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 462 IGLVSQEPVLFTG-SIKDNIAYGKDDATT----------EEI--RVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 462 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
++|++|++.+|.. |++||+.++...... ... ........+.+.++.+ |++......+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999875 999999975321000 000 0000111233455565 777777888899999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChh
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHS 605 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 605 (1288)
||++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999998754 6899999999999866 9999999999999999998
Q ss_pred HHhcC
Q 000777 606 KLVED 610 (1288)
Q Consensus 606 ~l~~~ 610 (1288)
++.+.
T Consensus 240 ~~~~~ 244 (255)
T PRK11300 240 EIRNN 244 (255)
T ss_pred HHhhC
Confidence 87653
No 443
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-40 Score=361.80 Aligned_cols=205 Identities=37% Similarity=0.654 Sum_probs=172.7
Q ss_pred EEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEE
Q 000777 385 ELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGL 464 (1288)
Q Consensus 385 ~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 464 (1288)
+++|++++|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999632 2569999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EcCCCC--CCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 465 VSQEPV--LFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 465 v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
++|++. ++..|++||+.++... ....+... .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999983 5678999999875321 12211111 122334444 555556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCE
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGK 597 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~ 597 (1288)
|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999998864 6899999999999987 99999999985
No 444
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.7e-40 Score=361.43 Aligned_cols=201 Identities=30% Similarity=0.498 Sum_probs=169.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r~ 460 (1288)
++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 35699999999999999999999999999999999999999999999999999876543 4677
Q ss_pred ceEEEcCCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 461 KIGLVSQEPVLFT-GSIKDNIAYGKDD--ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
.++|++|++.+|. .|++||+.++... ... +++.++++..+ +.........+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVG-----------LEHKADAFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHHHH
Confidence 8999999999885 6999999875211 111 22333333333 3333444557899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCE
Q 000777 534 ARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGK 597 (1288)
Q Consensus 534 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~ 597 (1288)
||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999999998754 7899999999999986 99999999985
No 445
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-40 Score=367.27 Aligned_cols=220 Identities=30% Similarity=0.499 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCC-CCCHH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLK-EFQLQ 456 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~-~~~~~ 456 (1288)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 488999999996 35699999999999999999999999999999999999986 5999999999985 34566
Q ss_pred HHhcceEEEcCCCCCCchhHHHHHhcCCCC--CC-HH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000777 457 WIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--AT-TE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 529 (1288)
.+|+.++|++|++.+|..|++||+.++... .. .+ ++.++++..++.+ ++.+.....+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWD-------EVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCch-------hhhHHhhcCcccCCHHHHH
Confidence 778899999999999999999999876321 11 11 1222333333222 2234456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 9999999999999999998886
Q ss_pred cCCC
Q 000777 609 EDPE 612 (1288)
Q Consensus 609 ~~~~ 612 (1288)
..+.
T Consensus 233 ~~~~ 236 (249)
T PRK14253 233 SNPK 236 (249)
T ss_pred cCCC
Confidence 5433
No 446
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-40 Score=372.00 Aligned_cols=217 Identities=28% Similarity=0.465 Sum_probs=180.3
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCC--CCCHHHHhcc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLK--EFQLQWIRKK 461 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~r~~ 461 (1288)
|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999962 46999999999999999999999999999999999999999999999999985 3344567789
Q ss_pred eEEEcCCCC--CCchhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 462 IGLVSQEPV--LFTGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 462 i~~v~Q~~~--l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
|+||+|++. ++..|+.+|+.++.. ....++..+. +.+.++.+ |++........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 567789999987421 1222221111 12233333 343334556789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+.+|++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999875 46899999999999865 999999999999999999988654
No 447
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=369.03 Aligned_cols=221 Identities=32% Similarity=0.489 Sum_probs=185.4
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 454 (1288)
+.++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 46999999999962 4699999999999999999999999999999999999985 48999999999854 34
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCC---CCH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD---ATT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
...++++|+|++|++.+|+.|++||+.++... ..+ +.+.++++..++.+++ ....+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 45678899999999999999999999875321 111 2233444444433222 223456778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe-----CCEEeEe
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIH-----RGKIVEK 601 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~-----~G~i~~~ 601 (1288)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998777899999999999876 99999998 5999999
Q ss_pred cChhHHhcCCC
Q 000777 602 GTHSKLVEDPE 612 (1288)
Q Consensus 602 g~~~~l~~~~~ 612 (1288)
|+++++.+.+.
T Consensus 236 ~~~~~~~~~~~ 246 (259)
T PRK14260 236 GVTTQIFSNPL 246 (259)
T ss_pred CCHHHHhcCCC
Confidence 99999876543
No 448
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-40 Score=370.84 Aligned_cols=220 Identities=34% Similarity=0.530 Sum_probs=183.3
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 454 (1288)
..|+++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 45999999999963 469999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--CC---HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--AT---TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 529 (1288)
...++++++|++|++.+|..|++||+.++... .. .+++.++++..++.. .+...++.++.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWD-------EVKDQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCc-------hhHHHHhCCcccCCHHHHH
Confidence 55678899999999999988999999875221 11 122333333332211 1122456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEE-EEeCCEEeEecChhHH
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIA-VIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~-~l~~G~i~~~g~~~~l 607 (1288)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5799999999999988
Q ss_pred hcCC
Q 000777 608 VEDP 611 (1288)
Q Consensus 608 ~~~~ 611 (1288)
..++
T Consensus 268 ~~~~ 271 (285)
T PRK14254 268 FENP 271 (285)
T ss_pred HhCc
Confidence 7653
No 449
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.9e-40 Score=378.65 Aligned_cols=201 Identities=24% Similarity=0.444 Sum_probs=173.5
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceEEEccCCCCchh-hHH
Q 000777 1058 VQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMGLVSQEPVLFND-TIR 1136 (1288)
Q Consensus 1058 ~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd~~Lf~g-TIr 1136 (1288)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999976 345678999999999999875 999
Q ss_pred HHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeccCC
Q 000777 1137 ANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKDPKILLLDEATS 1211 (1288)
Q Consensus 1137 eNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~p~ILlLDEaTS 1211 (1288)
||+.+... ...+ ++++.++++..++.+. ......+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEA-----------ADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976311 1112 2345566666665433 233456899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1212 ALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1212 aLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
+||+.+.+.+++.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 46899999999999975 999999999999999999999764
No 450
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=8e-40 Score=366.58 Aligned_cols=226 Identities=28% Similarity=0.442 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCC----CCceEEECCeeccCCCHHHH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDP----DAGHITLDGVEIQKLQLKWL 1117 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p----~~G~I~idG~di~~i~~~~l 1117 (1288)
.|+++||+++| + +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 48999999999 2 2599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcceEEEccCCC-Cch--hhHHHHHhcC---CCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1118 RQQMGLVSQEPV-LFN--DTIRANIAYG---KGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1118 R~~i~~V~Qd~~-Lf~--gTIreNl~~g---~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
++.++||||++. .|. .|+.+|+.+. ......+++++++++..++.++ ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 568999999985 343 5787776431 0112345677888887777542 1234566778999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhh
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLI 1268 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1268 (1288)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 6899999999999865 9999999999999999999998
Q ss_pred cCCCc-HHHHHHHH
Q 000777 1269 NIPDG-FYASLIAL 1281 (1288)
Q Consensus 1269 ~~~~g-~y~~L~~~ 1281 (1288)
+.+.. .++.++..
T Consensus 230 ~~~~~~~~~~~~~~ 243 (254)
T PRK10418 230 NAPKHAVTRSLVSA 243 (254)
T ss_pred hCCCCHHHHHHHHh
Confidence 76544 34445543
No 451
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=3.2e-39 Score=408.51 Aligned_cols=110 Identities=33% Similarity=0.533 Sum_probs=97.9
Q ss_pred cccc-cccCCCCCCChhHHHHHHHHHHHcCCC---CEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh
Q 000777 1171 GYDT-MVGERGLQLSGGQKQRVAIARAIVKDP---KILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIK 1245 (1288)
Q Consensus 1171 Gldt-~vge~G~~LSgGQrQrlaiARALlr~p---~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~ 1245 (1288)
|++. .++.....||||||||++|||+|+++| +++||||||++||+++...+.+.|+++. ++.|+|+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5543 367788899999999999999999999 9999999999999999999999999875 5789999999999999
Q ss_pred hcCEEEEE------eCCEEEEecChhhhhcCCCcHHHHHHH
Q 000777 1246 NADMIAVV------KNGVIVEKGKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1246 ~~DrI~vl------~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
.||+|++| ++|+|++.|+++++.+++.+.-.+.+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~t~~~l~ 938 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASYTGRYLK 938 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccHHHHHHH
Confidence 99999999 699999999999999876665555544
No 452
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-40 Score=367.33 Aligned_cols=225 Identities=30% Similarity=0.485 Sum_probs=183.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ-----AGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~--~~~ 455 (1288)
-++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYG---DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEEC---CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 378999999996 346999999999999999999999999999999999999874 8999999999864 334
Q ss_pred HHHhcceEEEcCCCCCCc-hhHHHHHhcCCCC--C-CHHHHHHHHHHcCHHHHHHhC--CCCccccccCCCCCCChHHHH
Q 000777 456 QWIRKKIGLVSQEPVLFT-GSIKDNIAYGKDD--A-TTEEIRVATELANAAKFIDKL--PQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqkq 529 (1288)
..+++.++|++|++.+|. .|++||+.++... . ..++..+.+. +.+..+ ..++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 567788999999999887 5999999865321 1 2222222111 111111 111222334567899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLV 608 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 608 (1288)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999986 9999999999999999999998
Q ss_pred cCCCchH
Q 000777 609 EDPEGAY 615 (1288)
Q Consensus 609 ~~~~~~~ 615 (1288)
..+...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14272 236 TNPRDER 242 (252)
T ss_pred hCcCcHH
Confidence 7654444
No 453
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=371.44 Aligned_cols=218 Identities=33% Similarity=0.558 Sum_probs=182.6
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC--CCHHHHhcc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE--FQLQWIRKK 461 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 461 (1288)
++++|++++|+. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999962 3469999999999999999999999999999999999999999999999999852 234457789
Q ss_pred eEEEcCCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 462 IGLVSQEP--VLFTGSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 462 i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
|+|++|+| .+|..|++||+.++... .+.++..+ .+.+.++.+ |+.......+.+||||||||++||||+
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999998 57888999999875321 22222111 112333443 444445566789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
+.+|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999998864 6899999999999875 999999999999999999998764
No 454
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.8e-40 Score=367.87 Aligned_cols=223 Identities=30% Similarity=0.443 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCC---CceEEECCeeccCC-----C
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPD---AGHITLDGVEIQKL-----Q 1113 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~---~G~I~idG~di~~i-----~ 1113 (1288)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 3899999999963 46999999999999999999999999999999999999986 49999999998653 3
Q ss_pred HHHHhcceEEEccCCCCch-hhHHHHHhcCCCC-------------CCCHHHHHHHHHHhchhHHHHhhhccccccccCC
Q 000777 1114 LKWLRQQMGLVSQEPVLFN-DTIRANIAYGKGG-------------DATEAEIQAASEMANAHKFICSLQQGYDTMVGER 1179 (1288)
Q Consensus 1114 ~~~lR~~i~~V~Qd~~Lf~-gTIreNl~~g~~~-------------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~ 1179 (1288)
...+|++++|+||++.+|. .|++||+.++... ...++++.++++..++.++ ....
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHF-----------AHQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHH-----------HhCC
Confidence 4567889999999999887 5999999865210 0112345556666655443 2344
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCC
Q 000777 1180 GLQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNG 1256 (1288)
Q Consensus 1180 G~~LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G 1256 (1288)
...||||||||++||||++.+|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 568999999999999999999999999999999999999999999998753 789999999999875 59999999999
Q ss_pred EEEEecChhhhhcCCCcHHHHHHHH
Q 000777 1257 VIVEKGKHENLINIPDGFYASLIAL 1281 (1288)
Q Consensus 1257 ~Ive~Gt~~eLl~~~~g~y~~L~~~ 1281 (1288)
++++.|+++++ . .....+++..
T Consensus 230 ~i~~~g~~~~~-~--~~~~~~~~~~ 251 (262)
T PRK09984 230 HVFYDGSSQQF-D--NERFDHLYRS 251 (262)
T ss_pred EEEEeCCHHHh-c--cHHHHHHHhh
Confidence 99999999997 2 3355665543
No 455
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=345.74 Aligned_cols=221 Identities=28% Similarity=0.502 Sum_probs=192.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHH-hcce
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWI-RKKI 462 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 462 (1288)
++++|++++|+ +-.+++|+||++++||+++|+|||||||||++++|.|+|+|++|+|.++|+||..++++.+ |..|
T Consensus 5 L~v~~l~k~FG---Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 5 LEVRGLSKRFG---GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeccceeecC---CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 67899999996 4569999999999999999999999999999999999999999999999999999998764 5789
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCCC-----------CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDDA-----------TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
+--||.+.+|+ .||.||+..+.... ...+..++. ..+.+.++.+ |++...++...+||+|||+|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~--e~A~~~Le~v--gL~~~a~~~A~~LsyG~qR~ 157 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREAR--ERARELLEFV--GLGELADRPAGNLSYGQQRR 157 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHH--HHHHHHHHHc--CCchhhcchhhcCChhHhHH
Confidence 99999999995 59999999863211 001112222 2233455655 88888889999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
+.|||||+.+|++|+||||.++|.+.....+.+.|+++.+ +.|+++|.||++.+.. ||||+||+.|+++.+|+|+|.
T Consensus 158 LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV 237 (250)
T COG0411 158 LEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEV 237 (250)
T ss_pred HHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHH
Confidence 9999999999999999999999999999999999999985 3899999999999987 999999999999999999999
Q ss_pred hcCC
Q 000777 608 VEDP 611 (1288)
Q Consensus 608 ~~~~ 611 (1288)
.++|
T Consensus 238 ~~dp 241 (250)
T COG0411 238 RNNP 241 (250)
T ss_pred hcCH
Confidence 8874
No 456
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.5e-40 Score=361.21 Aligned_cols=202 Identities=30% Similarity=0.519 Sum_probs=166.0
Q ss_pred EEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEE
Q 000777 385 ELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGL 464 (1288)
Q Consensus 385 ~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 464 (1288)
+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 46999999999999999999999999999999999999999999999998764 45778999
Q ss_pred EcCCCCC---CchhHHHHHhcCCCCC------CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 465 VSQEPVL---FTGSIKDNIAYGKDDA------TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 465 v~Q~~~l---~~~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
++|++.+ ++.|++||+.++.... ..++.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADK-----AKVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHH-----HHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999976 5689999998764311 001110 0122233333 4444445566799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999876 56899999999999876 9999999886 55544
No 457
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-39 Score=357.57 Aligned_cols=210 Identities=31% Similarity=0.483 Sum_probs=184.5
Q ss_pred EEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH----HHHhc
Q 000777 385 ELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL----QWIRK 460 (1288)
Q Consensus 385 ~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~----~~~r~ 460 (1288)
.+.|++|+|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 57899999973 3579999999999999999999999999999999999999999999999998876542 23567
Q ss_pred ceEEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 461 KIGLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
.++|++|+|.+|+.|++||+.++.+ ...++..++++..++.+.+..+|.|+++.++....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998653 334555677777788888888999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHH--HHHHhcC-CceEEEEecCchhhhhcCEEEEEeCCE
Q 000777 541 PRILLLDEATSALDAESEKVVQE--ALDRIMV-NRTTVIVAHRLSTVRNADMIAVIHRGK 597 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~--~l~~~~~-~~t~i~itH~l~~~~~~d~i~~l~~G~ 597 (1288)
|++|||||||++||+.+...+.+ .++.+.+ ++|+|++||+++.+..||++++|++|.
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 4555543 589999999999987899999999884
No 458
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=364.86 Aligned_cols=223 Identities=30% Similarity=0.510 Sum_probs=187.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCCC--CH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKEF--QL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~--~~ 455 (1288)
.++++||+++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFD---DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 378999999996 2469999999999999999999999999999999999864 4899999999998653 45
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..++++++|+||++.+|..|++||+.++... . +. +++.++++.+++.+++. ..++..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHH
Confidence 5678899999999999999999999875321 1 11 22334445544433332 224567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999876 999999999999999999999
Q ss_pred hcCCCchH
Q 000777 608 VEDPEGAY 615 (1288)
Q Consensus 608 ~~~~~~~~ 615 (1288)
...+...+
T Consensus 233 ~~~~~~~~ 240 (250)
T PRK14266 233 FINPKDKR 240 (250)
T ss_pred HhCCCChH
Confidence 76654443
No 459
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.8e-40 Score=361.44 Aligned_cols=213 Identities=25% Similarity=0.451 Sum_probs=180.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 589999999996 34699999999999999999999999999999999999999999999999999888877788899
Q ss_pred EEEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 463 GLVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 463 ~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
+|++|++.+|+.|++||+.++.......... ..+.+.++.+ |+. +.....+.+||||||||++|||||+++|
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-----AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFMP 156 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH-----HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999899999998642100000000 1122445555 553 4567788999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEe-CCEEeEecChh
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIH-RGKIVEKGTHS 605 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~-~G~i~~~g~~~ 605 (1288)
+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|+ ++..+++|+|+
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 157 KVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999998753 689999999999998899999995 66677788875
No 460
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-40 Score=357.16 Aligned_cols=230 Identities=28% Similarity=0.482 Sum_probs=189.7
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC-C----CCceEEECCeeccCCCHHH
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD-P----DAGHITLDGVEIQKLQLKW 1116 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-p----~~G~I~idG~di~~i~~~~ 1116 (1288)
++++|++..|+... ...+++||||+|++||++||||.|||||||+.++++|+.+ | .+|+|.++|.|+-.++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999997532 2469999999999999999999999999999999999998 4 5799999999999999875
Q ss_pred Hh----cceEEEccCCC-Cch--hhHHHH----HhcCCCC---CCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCC
Q 000777 1117 LR----QQMGLVSQEPV-LFN--DTIRAN----IAYGKGG---DATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQ 1182 (1288)
Q Consensus 1117 lR----~~i~~V~Qd~~-Lf~--gTIreN----l~~g~~~---~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~ 1182 (1288)
+| +.|++|||||. =|+ -||.+- +...... ....++..+.++.+++.+- +..+..-..+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~--------~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDP--------ERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCH--------HHHHhhCCcc
Confidence 43 37999999984 122 234333 3321110 0113467777888887643 2234456788
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEE
Q 000777 1183 LSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIV 1259 (1288)
Q Consensus 1183 LSgGQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv 1259 (1288)
||||||||+.||-||+.+|++||.||||+|||..++++|.+.|+++.+ +.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 999999999999999999999999999999999999999999998874 7899999999999866 9999999999999
Q ss_pred EecChhhhhcCCCcHHHHHHH
Q 000777 1260 EKGKHENLINIPDGFYASLIA 1280 (1288)
Q Consensus 1260 e~Gt~~eLl~~~~g~y~~L~~ 1280 (1288)
|.|+.+++++++...|.+.+-
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll 254 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLL 254 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHH
Confidence 999999999999888877553
No 461
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.3e-39 Score=357.90 Aligned_cols=208 Identities=27% Similarity=0.478 Sum_probs=173.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH---HHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ---WIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r~ 460 (1288)
|+++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999942 35699999999999999999999999999999999999999999999999999876543 3678
Q ss_pred ceEEEcCCCCCC-chhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 461 KIGLVSQEPVLF-TGSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 461 ~i~~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
.++|++|+|.++ ..|++||+.++.. ..+.++..+. +.+.++.+ |+.........+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 999999999874 6799999987531 1222222111 11233333 444445566789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeE
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVE 600 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~ 600 (1288)
+.+|++|||||||++||+.+.+.+.+.|+++.+ +.|+|++||+++.+.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999998754 6899999999999976 99999999999863
No 462
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=367.63 Aligned_cols=214 Identities=27% Similarity=0.439 Sum_probs=184.2
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKK 461 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 461 (1288)
..|+++|++++|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999963 469999999999999999999999999999999999999999999999999988877777889
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCC-CC------CCH---HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGK-DD------ATT---EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~-~~------~~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
++|+||++.+|. .|++||+.++. +. ... +++.++++ .+ |++......+.+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~--~l~~~~~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQ---------AT--GITHLADQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHH---------Hc--CCHHHhcCCcccCChHHHHH
Confidence 999999998874 69999998752 11 011 12233333 33 44444556778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998854 6799999999998866 999999999999999999887
Q ss_pred hc
Q 000777 608 VE 609 (1288)
Q Consensus 608 ~~ 609 (1288)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 64
No 463
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.9e-40 Score=368.34 Aligned_cols=221 Identities=25% Similarity=0.442 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998888777788899
Q ss_pred EEcCCCCC-CchhHHHHHhcCCCCCCHH-HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000777 464 LVSQEPVL-FTGSIKDNIAYGKDDATTE-EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDP 541 (1288)
Q Consensus 464 ~v~Q~~~l-~~~ti~~ni~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~ 541 (1288)
|++|++.+ +..|++||+.++....... ..........+.+.++.+ |+.......+.+||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999864 5679999998763211000 000000011223344444 4544556677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhc
Q 000777 542 RILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVE 609 (1288)
Q Consensus 542 ~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 609 (1288)
+++||||||++||+.+...+.+.|+++.+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999998864 6899999999999965 99999999999999999888754
No 464
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.2e-39 Score=366.43 Aligned_cols=225 Identities=29% Similarity=0.473 Sum_probs=186.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCee-----CCCCCHHH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGIN-----LKEFQLQW 457 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~-----~~~~~~~~ 457 (1288)
.++++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 469999999999999999999999999999999999999999999999998 77666543
Q ss_pred ----HhcceEEEcCCCC--CC-chhHHHHHhcCC---CCCCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChH
Q 000777 458 ----IRKKIGLVSQEPV--LF-TGSIKDNIAYGK---DDATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGG 526 (1288)
Q Consensus 458 ----~r~~i~~v~Q~~~--l~-~~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgG 526 (1288)
.++.++|++|++. ++ ..|+.+|+.+.. ......+... .+.++++.+ |++ +..+..+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 33 358888886421 1111111111 234566666 454 4677888999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecC
Q 000777 527 QKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 527 qkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 603 (1288)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988754 6899999999999975 99999999999999999
Q ss_pred hhHHhcCCCchHHH
Q 000777 604 HSKLVEDPEGAYSQ 617 (1288)
Q Consensus 604 ~~~l~~~~~~~~~~ 617 (1288)
++++..++...|.+
T Consensus 236 ~~~~~~~~~~~~~~ 249 (258)
T PRK11701 236 TDQVLDDPQHPYTQ 249 (258)
T ss_pred HHHHhcCCCCHHHH
Confidence 99997664444443
No 465
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-40 Score=338.10 Aligned_cols=220 Identities=29% Similarity=0.431 Sum_probs=186.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHH-Hhcce
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKW-LRQQM 1121 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1121 (1288)
++++||+..|.. .++|+||||++++||+|+++||||+|||||+++|+|+.+|.+|+|.++|.||+..+++. .|..|
T Consensus 4 L~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 4 LEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred eeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 789999999963 47999999999999999999999999999999999999999999999999999998766 57889
Q ss_pred EEEccCCCCch-hhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHHcCC
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAIVKD 1200 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARALlr~ 1200 (1288)
+||||...+|. -||.|||.+|... ..+++-++ ..+++.-+-+| -+.......+.+|||||+|.+||||||+.+
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~-~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYA-RRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhc-cccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 99999999995 6999999876321 11111110 00111112233 344556677889999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhcCC
Q 000777 1201 PKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLINIP 1271 (1288)
Q Consensus 1201 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~~~ 1271 (1288)
|++|+|||||.+|-|.--+.|.++|+++.+ +.||+.|-++..... -+||.+||++|+|+.+|+.+||.+++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 999999999999999999999999999874 459999999999875 49999999999999999999999863
No 466
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.4e-40 Score=359.18 Aligned_cols=206 Identities=33% Similarity=0.536 Sum_probs=171.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCH---HHHhc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQL---QWIRK 460 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r~ 460 (1288)
++++|++++|+.. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4689999999632 469999999999999999999999999999999999999999999999999987654 24677
Q ss_pred ceEEEcCCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 461 KIGLVSQEPVLFT-GSIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 461 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
.++|++|++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 8999999999887 5999999875321 12211111 112233333 444445556679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKI 598 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 598 (1288)
+.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 46899999999999976 999999999974
No 467
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-40 Score=377.94 Aligned_cols=230 Identities=23% Similarity=0.373 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCC-CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC----CCCcEEEECCeeCCCCCHHH
Q 000777 383 DIELRDVYFSYPAR-PNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD----PQAGEVLIDGINLKEFQLQW 457 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 457 (1288)
-|+++|++++|+.+ ....+|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++..++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37899999999632 22469999999999999999999999999999999999986 58999999999998877654
Q ss_pred H----hcceEEEcCCCCC--C-chhHHHHHhcCCC---CC-----CHHHHHHHHHHcCHHHHHHhCCCCcc---ccccCC
Q 000777 458 I----RKKIGLVSQEPVL--F-TGSIKDNIAYGKD---DA-----TTEEIRVATELANAAKFIDKLPQGID---TLVGEH 519 (1288)
Q Consensus 458 ~----r~~i~~v~Q~~~l--~-~~ti~~ni~~~~~---~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~ 519 (1288)
+ ++.|+||||+|.. + ..||.+|+..... .. ...+.. ..+.+.++.+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRK-----RRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHH-----HHHHHHHHHC--CCCChHHHHhCC
Confidence 4 3479999999963 3 3589999864211 00 001110 1122344444 443 234567
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCC
Q 000777 520 GTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRG 596 (1288)
Q Consensus 520 g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G 596 (1288)
+.+|||||||||+|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 789999999999999999999999999999999999999999999998864 6899999999999976 9999999999
Q ss_pred EEeEecChhHHhcCCCchHHHHH
Q 000777 597 KIVEKGTHSKLVEDPEGAYSQLI 619 (1288)
Q Consensus 597 ~i~~~g~~~~l~~~~~~~~~~~~ 619 (1288)
+|++.|+.+++.+++...|.+.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHHHH
Confidence 99999999999887777776643
No 468
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=367.33 Aligned_cols=225 Identities=31% Similarity=0.470 Sum_probs=187.6
Q ss_pred cccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCC----
Q 000777 381 RGDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLK---- 451 (1288)
Q Consensus 381 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~---- 451 (1288)
.+.|+++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 357999999999963 4699999999999999999999999999999999999875 7999999998874
Q ss_pred CCCHHHHhcceEEEcCCCCCCchhHHHHHhcCCC--CCC-----HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCC
Q 000777 452 EFQLQWIRKKIGLVSQEPVLFTGSIKDNIAYGKD--DAT-----TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLS 524 (1288)
Q Consensus 452 ~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 524 (1288)
..+...+++.|+|++|++.+|.+|++||+.++.. ... ++++..+++.+++.+ ++.+..+..+.+||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCC
Confidence 2344567889999999999998999999987531 111 122333333333221 33345667788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecC
Q 000777 525 GGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGT 603 (1288)
Q Consensus 525 gGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 603 (1288)
||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999975 99999999999999999
Q ss_pred hhHHhcCCCchH
Q 000777 604 HSKLVEDPEGAY 615 (1288)
Q Consensus 604 ~~~l~~~~~~~~ 615 (1288)
++++..++...|
T Consensus 244 ~~~~~~~~~~~~ 255 (265)
T PRK14252 244 TDTIFIKPKNKQ 255 (265)
T ss_pred HHHHHhCCCCHH
Confidence 999876533333
No 469
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.2e-40 Score=365.60 Aligned_cols=214 Identities=21% Similarity=0.363 Sum_probs=176.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc--CCCCCceEEECCeeccCCCHHHH-hc
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRF--YDPDAGHITLDGVEIQKLQLKWL-RQ 1119 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl--~~p~~G~I~idG~di~~i~~~~l-R~ 1119 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 3699999999999999999999999999999999999 47999999999999988876654 45
Q ss_pred ceEEEccCCCCchh-hHHHHHhcCCC--CC------CC----HHHHHHHHHHhchhHHHHhhhccccccccCCCC-CCCh
Q 000777 1120 QMGLVSQEPVLFND-TIRANIAYGKG--GD------AT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGL-QLSG 1185 (1288)
Q Consensus 1120 ~i~~V~Qd~~Lf~g-TIreNl~~g~~--~~------~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~-~LSg 1185 (1288)
.++|+||+|.+|.+ |++||+.+... .. .+ ++++.++++..++.+. ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEE----------FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchh----------hcccccccCcCH
Confidence 69999999998875 89999865311 00 11 1234445554444311 1122233 5999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhh--cCEEEEEeCCEEEEec
Q 000777 1186 GQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRLSTIKN--ADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1186 GQrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~--~DrI~vl~~G~Ive~G 1262 (1288)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 46899999999999976 7999999999999999
Q ss_pred Chhhhhc
Q 000777 1263 KHENLIN 1269 (1288)
Q Consensus 1263 t~~eLl~ 1269 (1288)
+++++..
T Consensus 228 ~~~~~~~ 234 (243)
T TIGR01978 228 DVELAKE 234 (243)
T ss_pred CHHHhcc
Confidence 9986543
No 470
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=370.92 Aligned_cols=224 Identities=30% Similarity=0.455 Sum_probs=184.7
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCCC--C
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKEF--Q 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~--~ 454 (1288)
..|+++|++++|+. .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 35899999999963 469999999999999999999999999999999999864 4999999999998643 3
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
...+|++++||+|++.+|..|++||+.++... . .. +++.++++..++.+ ++.......+.+|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHH
Confidence 34567899999999999988999999975321 1 11 12222333222211 12233456778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhH
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777899999999999876 99999999999999999999
Q ss_pred HhcCCCchH
Q 000777 607 LVEDPEGAY 615 (1288)
Q Consensus 607 l~~~~~~~~ 615 (1288)
+.+++...+
T Consensus 268 ~~~~~~~~~ 276 (286)
T PRK14275 268 LFTNPKDRM 276 (286)
T ss_pred HHhCCCcHH
Confidence 877644433
No 471
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.2e-40 Score=368.68 Aligned_cols=227 Identities=30% Similarity=0.468 Sum_probs=185.2
Q ss_pred EEEEEEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCH--
Q 000777 1043 IELHHVSFKYPSR------PDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQL-- 1114 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-- 1114 (1288)
|+++||+++|+.. .++++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8899999999731 03479999999999999999999999999999999999999999999999999987765
Q ss_pred -HHHhcceEEEccCCC--Cc-hhhHHHHHhcCCC--CCCCHHHHHHHHHHhchhHHHHhhhccccc-cccCCCCCCChhH
Q 000777 1115 -KWLRQQMGLVSQEPV--LF-NDTIRANIAYGKG--GDATEAEIQAASEMANAHKFICSLQQGYDT-MVGERGLQLSGGQ 1187 (1288)
Q Consensus 1115 -~~lR~~i~~V~Qd~~--Lf-~gTIreNl~~g~~--~~~sd~ei~~al~~a~l~~~i~~lp~Gldt-~vge~G~~LSgGQ 1187 (1288)
..+|+.++|+||++. ++ ..|+++|+.+... ...+.++ ....+.+.+..+ |+++ ..+..+..|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAE-----RLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHH-----HHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 357889999999983 43 4799999864210 0111111 111223333332 4542 3456678999999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecCh
Q 000777 1188 KQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKH 1264 (1288)
Q Consensus 1188 rQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~ 1264 (1288)
|||++|||||+.+|+||||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998753 7899999999999975 999999999999999999
Q ss_pred hhhhcCCCcHHHH
Q 000777 1265 ENLINIPDGFYAS 1277 (1288)
Q Consensus 1265 ~eLl~~~~g~y~~ 1277 (1288)
+++... ++.|..
T Consensus 237 ~~~~~~-~~~~~~ 248 (268)
T PRK10419 237 GDKLTF-SSPAGR 248 (268)
T ss_pred hhccCC-CCHHHH
Confidence 999875 555543
No 472
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-40 Score=359.35 Aligned_cols=205 Identities=26% Similarity=0.500 Sum_probs=173.6
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..+++++
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 47899999996 3469999999999999999999999999999999999999999999999988753 4567899
Q ss_pred EEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|++|++.++. .|++||+.++.. .....+.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 499999987421 11111111 1233455555 666666777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998875 46899999999999866 9999999999998754
No 473
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-40 Score=367.31 Aligned_cols=221 Identities=25% Similarity=0.382 Sum_probs=185.3
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC--------CcEEEECCeeCCCCCH
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ--------AGEVLIDGINLKEFQL 455 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~--------~G~i~~~g~~~~~~~~ 455 (1288)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARR---HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEEC---CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 78999999995 346999999999999999999999999999999999999998 9999999999988777
Q ss_pred HHHhcceEEEcCCCC-CCchhHHHHHhcCCCCC-CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000777 456 QWIRKKIGLVSQEPV-LFTGSIKDNIAYGKDDA-TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAI 533 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~-l~~~ti~~ni~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~l 533 (1288)
..+++.++|++|++. +|..|++||+.++.... .............+.+.++.+ |+++..+....+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 777888999999986 56789999998763211 000000000001123344555 67777788889999999999999
Q ss_pred HHHhc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEe
Q 000777 534 ARAIL---------KDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEK 601 (1288)
Q Consensus 534 ARal~---------~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 601 (1288)
||||+ .+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 59999999999999999999999999998764 6899999999999865 999999999999999
Q ss_pred cChhHHhc
Q 000777 602 GTHSKLVE 609 (1288)
Q Consensus 602 g~~~~l~~ 609 (1288)
|+++++..
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99988864
No 474
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=380.46 Aligned_cols=212 Identities=28% Similarity=0.480 Sum_probs=180.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCC----CHHHHh
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEF----QLQWIR 459 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~~~r 459 (1288)
|++ |++++|+. . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999953 2 23 89999999999999999999999999999999999999999999998653 234457
Q ss_pred cceEEEcCCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000777 460 KKIGLVSQEPVLFT-GSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAIL 538 (1288)
Q Consensus 460 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~ 538 (1288)
++++||+|++.+|. .|++||+.++......+++.+.++ .+ |++........+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~---------~~--gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVA---------LL--GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHH---------Hc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 79999999999985 699999998754322333333333 33 4555556667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000777 539 KDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVEDPE 612 (1288)
Q Consensus 539 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 612 (1288)
.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 99999999999999999999999999998764 6899999999998876 99999999999999999999988754
No 475
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.8e-40 Score=382.40 Aligned_cols=234 Identities=32% Similarity=0.506 Sum_probs=189.5
Q ss_pred ccEEEEeEEEECCCC--------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeC--C
Q 000777 382 GDIELRDVYFSYPAR--------PNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINL--K 451 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~--------~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~--~ 451 (1288)
.-++++|++++|..+ ....+++||||++.+||++||||+||||||||.++|+|+.+|++|+|.++|.|+ +
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 458899999999742 124689999999999999999999999999999999999999999999999882 2
Q ss_pred CCCHHHHhcceEEEcCCCCC--C-chhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccc-cccCCCCCCChHH
Q 000777 452 EFQLQWIRKKIGLVSQEPVL--F-TGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDT-LVGEHGTQLSGGQ 527 (1288)
Q Consensus 452 ~~~~~~~r~~i~~v~Q~~~l--~-~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGq 527 (1288)
.-+....|+++-+|+|||+- - ..||+++|.-......... .+.+.+.+.+.++.. |+.. .....+.+|||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~V--gL~~~~l~ryP~elSGGQ 434 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELV--GLPPEFLDRYPHELSGGQ 434 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHc--CCCHHHHhcCchhcCcch
Confidence 22344577899999999963 3 4699999975422111000 011111122222222 3333 4667788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecCh
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTH 604 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 604 (1288)
||||||||||..+|+++|+|||||+||+-+...+.+.|+++.+ +.|.|+||||++.++. ||||+||++|+|+|.|+.
T Consensus 435 rQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~ 514 (539)
T COG1123 435 RQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPT 514 (539)
T ss_pred hHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999998865 5799999999999988 999999999999999999
Q ss_pred hHHhcCCCchHHHHH
Q 000777 605 SKLVEDPEGAYSQLI 619 (1288)
Q Consensus 605 ~~l~~~~~~~~~~~~ 619 (1288)
+++.+++...|.+..
T Consensus 515 ~~v~~~p~h~Ytr~L 529 (539)
T COG1123 515 EKVFENPQHPYTRKL 529 (539)
T ss_pred HHHhcCCCChHHHHH
Confidence 999999888888754
No 476
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-39 Score=369.15 Aligned_cols=215 Identities=30% Similarity=0.520 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcce
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQM 1121 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1121 (1288)
.++++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 3788999999962 24699999999999999999999999999999999999999999999999998665 77899999
Q ss_pred EEEccCCCCch-hhHHHHHhcCC-----CCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHH
Q 000777 1122 GLVSQEPVLFN-DTIRANIAYGK-----GGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIAR 1195 (1288)
Q Consensus 1122 ~~V~Qd~~Lf~-gTIreNl~~g~-----~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1195 (1288)
|||||+|.++. -|++|||.|.. .....++++.+.++..++.+.- ......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 99999999775 69999998531 1112356788888888876521 2334579999999999999
Q ss_pred HHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC-C-ceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcC
Q 000777 1196 AIVKDPKILLLDEATSALDAESERVVQDALDRVMK-N-RTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1196 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~-~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
||+.+|++|||||||++||+.+...+++.|+++.+ + +||++.||.++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999875 4 699999999999987 999999999999999999998754
No 477
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=365.16 Aligned_cols=221 Identities=31% Similarity=0.448 Sum_probs=185.2
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 454 (1288)
..|+++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 4699999999999999999999999999999999999863 69999999999864 33
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCCC-----CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA-----TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 529 (1288)
...++++|+|++|++.+|+.|++||+.++.... .++.+.++++.+++.+.+ .......+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHH
Confidence 446778999999999999889999998753211 112233344444432222 22345677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe---------CCEEe
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIH---------RGKIV 599 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~---------~G~i~ 599 (1288)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998777899999999999976 99999997 89999
Q ss_pred EecChhHHhcCCC
Q 000777 600 EKGTHSKLVEDPE 612 (1288)
Q Consensus 600 ~~g~~~~l~~~~~ 612 (1288)
+.|+++++...+.
T Consensus 249 ~~g~~~~~~~~~~ 261 (274)
T PRK14265 249 EFSPTEQMFGSPQ 261 (274)
T ss_pred EeCCHHHHHhCCC
Confidence 9999999876544
No 478
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=366.22 Aligned_cols=218 Identities=32% Similarity=0.496 Sum_probs=181.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 455 (1288)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 4699999999999999999999999999999999999974 79999999999853 345
Q ss_pred HHHhcceEEEcCCCCCCc-hhHHHHHhcCCCC---CCHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 456 QWIRKKIGLVSQEPVLFT-GSIKDNIAYGKDD---ATTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
..+++.++|++|++.+|. .|++||+.++... ...+ .+.++++..++.+ +........+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWN-------EVKDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHH
Confidence 567889999999999886 5999999875321 1111 1222233332211 11234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe------CCEEeE
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIH------RGKIVE 600 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~------~G~i~~ 600 (1288)
|||++||||++.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999998767899999999999865 99999997 899999
Q ss_pred ecChhHHhcC
Q 000777 601 KGTHSKLVED 610 (1288)
Q Consensus 601 ~g~~~~l~~~ 610 (1288)
.|+++++...
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998765
No 479
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.7e-40 Score=371.40 Aligned_cols=214 Identities=31% Similarity=0.541 Sum_probs=183.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKI 462 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 462 (1288)
.++++|++++|+. ++.+|+||||+|++|+++|++||||||||||+++|+|+..|++|+|.++|.+...- ....+++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999962 35799999999999999999999999999999999999999999999999998765 66778899
Q ss_pred EEEcCCCCCCc-hhHHHHHhcCCCC------CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000777 463 GLVSQEPVLFT-GSIKDNIAYGKDD------ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIAR 535 (1288)
Q Consensus 463 ~~v~Q~~~l~~-~ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lAR 535 (1288)
||+||+|.++. .|++||+.|...- ...+++.+.++..++ +........+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L-----------~~~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGL-----------EDKANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCC-----------chhhCcchhhcCHHHHHHHHHHH
Confidence 99999999874 5999999974211 112344555554443 32224556789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-C-ceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 536 AILKDPRILLLDEATSALDAESEKVVQEALDRIMV-N-RTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 536 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
||+.+|++|||||||++|||.++..+.+.|+++.+ + +||+++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999876 4 699999999999987 999999999999999999887653
No 480
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-39 Score=359.67 Aligned_cols=212 Identities=27% Similarity=0.428 Sum_probs=174.1
Q ss_pred cEEEEeEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000777 383 DIELRDVYFSYPARPN-EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQW---I 458 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 458 (1288)
.|+++|++++|+.... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999964211 35999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hcceEEEcCCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000777 459 -RKKIGLVSQEPVLFT-GSIKDNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIA 534 (1288)
Q Consensus 459 -r~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lA 534 (1288)
++.++|++|++.++. .|++||+.++.. .....+.. ..+.+.++.+ |++........+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSR-----NGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 368999999999886 499999986421 11111111 1122333444 444444556679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCEEeEe
Q 000777 535 RAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRNADMIAVIHRGKIVEK 601 (1288)
Q Consensus 535 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 601 (1288)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999998753 6899999999998877999999999999764
No 481
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=9.2e-40 Score=343.83 Aligned_cols=172 Identities=39% Similarity=0.705 Sum_probs=161.1
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|+.. ..++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999632 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000777 464 LVSQEPVLFTGSIKDNIAYGKDDATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRI 543 (1288)
Q Consensus 464 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~i 543 (1288)
|++|++.+|+.|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 544 LLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRNADMIAVIHRGKI 598 (1288)
Q Consensus 544 lllDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~~d~i~~l~~G~i 598 (1288)
|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999988754 6899999999999877999999999974
No 482
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.1e-39 Score=356.59 Aligned_cols=205 Identities=32% Similarity=0.566 Sum_probs=173.5
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCC--CCHHHHhcc
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKE--FQLQWIRKK 461 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 461 (1288)
++++|++++|+. +++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999963 469999999999999999999999999999999999999999999999999853 344567789
Q ss_pred eEEEcCCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000777 462 IGLVSQEPVLFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAI 537 (1288)
Q Consensus 462 i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal 537 (1288)
++|++|++.+|. .|++||+.++.. ....++..+ .+.+.++.+ |++..+.....+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999886 699999987532 122221111 123345555 666666777789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCEE
Q 000777 538 LKDPRILLLDEATSALDAESEKVVQEALDRIMV-NRTTVIVAHRLSTVRN-ADMIAVIHRGKI 598 (1288)
Q Consensus 538 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i 598 (1288)
+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998864 6899999999999976 999999999974
No 483
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-40 Score=361.04 Aligned_cols=215 Identities=36% Similarity=0.557 Sum_probs=180.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++.+.+.. ++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~--~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPH--KRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChh--hcceE
Confidence 468999999963 4699999999999999999999999999999999999999999999999999765542 57899
Q ss_pred EEcCCCCCCch-hHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLFTG-SIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|++|++.+|.+ |++||+.++... .+...... .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKE-----RVAEALDLV--QLEGYANRKPSQLSGGQQQRVAIARALVNE 148 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999864 999999865321 11111111 112233333 455555566679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|+++||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 149 PKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999998864 7899999999999876 999999999999999999888764
No 484
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=363.43 Aligned_cols=220 Identities=30% Similarity=0.422 Sum_probs=186.0
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeeCCCC--CH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDP-----QAGEVLIDGINLKEF--QL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 455 (1288)
.+.+++++++|+ +.++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 8 ~~~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 588999999995 34699999999999999999999999999999999999986 799999999998643 33
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCCCC-----CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA-----TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQR 530 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 530 (1288)
..+++.++|++|++.+|..|++||+.++.... ..+++.++++..++.+.+ ....++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEV-------KDKLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHHHH
Confidence 45678899999999999999999999763211 112344445444443222 223456778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe--------CCEEeEe
Q 000777 531 IAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIH--------RGKIVEK 601 (1288)
Q Consensus 531 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~--------~G~i~~~ 601 (1288)
++|||||+++|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998777899999999999876 99999996 8999999
Q ss_pred cChhHHhcCCC
Q 000777 602 GTHSKLVEDPE 612 (1288)
Q Consensus 602 g~~~~l~~~~~ 612 (1288)
|+++++.+++.
T Consensus 238 g~~~~~~~~~~ 248 (261)
T PRK14263 238 GPTAQIFQNPR 248 (261)
T ss_pred CCHHHHHhCCC
Confidence 99999986543
No 485
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=365.35 Aligned_cols=222 Identities=31% Similarity=0.499 Sum_probs=185.0
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeeCCC--CC
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQ-----AGEVLIDGINLKE--FQ 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~--~~ 454 (1288)
+.|+++|++++|+. +.+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 36999999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHH
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDD--A-TT----EEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQ 527 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 527 (1288)
...+++.++|++|++.+|..|++||+.++... . +. +++.++++..++.++ ++...+..+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDE-------IKHKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcch-------hhhHhcCCcccCCHHH
Confidence 45678899999999999999999999865211 1 11 122333333333222 2234567778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeC-----CEEe
Q 000777 528 KQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIM--VNRTTVIVAHRLSTVRN-ADMIAVIHR-----GKIV 599 (1288)
Q Consensus 528 kqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~-----G~i~ 599 (1288)
|||++|||||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999864 37899999999999876 999999999 9999
Q ss_pred EecChhHHhcCCCc
Q 000777 600 EKGTHSKLVEDPEG 613 (1288)
Q Consensus 600 ~~g~~~~l~~~~~~ 613 (1288)
+.|+++++.+.+..
T Consensus 236 ~~~~~~~~~~~~~~ 249 (261)
T PRK14258 236 EFGLTKKIFNSPHD 249 (261)
T ss_pred EeCCHHHHHhCCCC
Confidence 99999999776443
No 486
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=364.51 Aligned_cols=203 Identities=28% Similarity=0.440 Sum_probs=172.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... ++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 3699999999999999999999999999999999999999999999999998642 34689
Q ss_pred EEccCCCCch-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKG-GDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
|+||++.+|. .|++||+.++.. .... ++++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGA-----------EKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hhCChhhCCHHHHHHHHHHHH
Confidence 9999999886 699999976421 0112 2345555665555433 334457899999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhh-cCEEEEEe--CCEEEEecCh
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVM--KNRTTVVVAHRLSTIKN-ADMIAVVK--NGVIVEKGKH 1264 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~Ive~Gt~ 1264 (1288)
|+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|+|++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999874 37899999999999865 99999998 5999998764
No 487
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.8e-39 Score=359.91 Aligned_cols=215 Identities=33% Similarity=0.542 Sum_probs=182.1
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++|++++|+. +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEcCCCCCCch-hHHHHHhcCCCC--CCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000777 464 LVSQEPVLFTG-SIKDNIAYGKDD--ATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKD 540 (1288)
Q Consensus 464 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~ 540 (1288)
|+||+|.+|.+ |++||+.++... .+..... ..+.+.++.+ |+.........+||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999965 999999876431 1111111 1223445555 444445566679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 541 PRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 541 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
|+++||||||++||+++++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999998764 6899999999999866 999999999999999999998764
No 488
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-39 Score=354.00 Aligned_cols=201 Identities=30% Similarity=0.532 Sum_probs=169.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
|+++|++++|++ +. .|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 478999999963 22 39999999999999999999999999999999999999999999999876654 357899
Q ss_pred EEcCCCCCCch-hHHHHHhcCCC-CC-----CHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 464 LVSQEPVLFTG-SIKDNIAYGKD-DA-----TTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 464 ~v~Q~~~l~~~-ti~~ni~~~~~-~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
|++|++.+|.. |++||+.++.. .. .++++.++++..++ +........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGL-----------AGLEKRLPGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCC-----------HHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999999865 99999987642 11 12233444444444 333444556899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEec
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKG 602 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 602 (1288)
++.+|++|||||||++||++++..+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998753 6899999999999976 9999999999998754
No 489
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.4e-40 Score=360.18 Aligned_cols=211 Identities=26% Similarity=0.446 Sum_probs=170.7
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC---CCCceEEECCeeccCCCHHHHh
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD---PDAGHITLDGVEIQKLQLKWLR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 1118 (1288)
+.|+||+|+|++.. .+++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999998532 2579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEccCCCCchh-hHHHHHhcCCC---CCCCHHHHHHHHHHhchhH-HHHhhhccccccccCCCCCCChhHHHHHHH
Q 000777 1119 QQMGLVSQEPVLFND-TIRANIAYGKG---GDATEAEIQAASEMANAHK-FICSLQQGYDTMVGERGLQLSGGQKQRVAI 1193 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~g-TIreNl~~g~~---~~~sd~ei~~al~~a~l~~-~i~~lp~Gldt~vge~G~~LSgGQrQrlai 1193 (1288)
++++|+||++.+|.+ |++||+.++.. .....++.. .....+ .+..+ +++.........||||||||++|
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~l 154 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIR----KKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSI 154 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHH----HHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHH
Confidence 999999999999987 99999986411 011111111 001111 11111 23333345567899999999999
Q ss_pred HHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCceEEEEecCc-hhh-hhcCEEEEEeCCEEEEec
Q 000777 1194 ARAIVKDPKILLLDEATSALDAESERVVQDALDRVM-KNRTTVVVAHRL-STI-KNADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1194 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl-~ti-~~~DrI~vl~~G~Ive~G 1262 (1288)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||++ ..+ ..||+|++|++|++++.|
T Consensus 155 aral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 155 AVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999999875 468999999998 455 559999999999999876
No 490
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=363.81 Aligned_cols=221 Identities=29% Similarity=0.462 Sum_probs=183.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC--C---CCcEEEECCeeCCC--CCH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD--P---QAGEVLIDGINLKE--FQL 455 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~--~---~~G~i~~~g~~~~~--~~~ 455 (1288)
.|+++||+++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 469999999999999999999999999999999999975 5 59999999999864 334
Q ss_pred HHHhcceEEEcCCCCCCchhHHHHHhcCCC--CC-CHH----HHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 456 QWIRKKIGLVSQEPVLFTGSIKDNIAYGKD--DA-TTE----EIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 456 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
..+++.++|++|++.+|..|+++|+.++.. .. ..+ ++.++++..++. .++.......+.+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIW-------DEVKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCc-------cchhhHHhcCcccCCHHHH
Confidence 456789999999999998999999987521 11 111 122222222221 1223345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++|||||+.+|++|||||||++||+.+++.+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|++.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999875 999999999999999999998
Q ss_pred hcCCCc
Q 000777 608 VEDPEG 613 (1288)
Q Consensus 608 ~~~~~~ 613 (1288)
..++..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14255 235 FLNPKE 240 (252)
T ss_pred hcCCCC
Confidence 776443
No 491
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=357.30 Aligned_cols=209 Identities=29% Similarity=0.502 Sum_probs=177.1
Q ss_pred EEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000777 384 IELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIG 463 (1288)
Q Consensus 384 i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 463 (1288)
++++||+++|+. . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 689999999962 2 2399999999999999999999999999999999999999999999998765442 46899
Q ss_pred EEcCCCCCCch-hHHHHHhcCCC-CC--C---HHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000777 464 LVSQEPVLFTG-SIKDNIAYGKD-DA--T---TEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARA 536 (1288)
Q Consensus 464 ~v~Q~~~l~~~-ti~~ni~~~~~-~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARa 536 (1288)
|++|++.+|.. |++||+.++.. .. . ++++.++++..+ ++..+......||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMG-----------IEDLLARLPGQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcC-----------cHHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999998875 99999987531 11 1 123344444444 4444455556999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 537 ILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 537 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
++++|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 6899999999999876 999999999999999999988764
No 492
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.7e-39 Score=364.53 Aligned_cols=222 Identities=24% Similarity=0.445 Sum_probs=180.5
Q ss_pred cEEEEeEEEECCCC------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHH
Q 000777 383 DIELRDVYFSYPAR------PNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQ 456 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~------~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~ 456 (1288)
.|+++||+++|+.. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765555
Q ss_pred HHhcceEEEcCCCC--CCc-hhHHHHHhcCCC---CCCHHHHHHHHHHcCHHHHHHhCCCCcc-ccccCCCCCCChHHHH
Q 000777 457 WIRKKIGLVSQEPV--LFT-GSIKDNIAYGKD---DATTEEIRVATELANAAKFIDKLPQGID-TLVGEHGTQLSGGQKQ 529 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkq 529 (1288)
..++.++|++|++. ++. .|+.+|+.++.. .....+..+ .+.+.++.+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 66678999999985 443 489999875321 111111111 112233333 332 2234455789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhH
Q 000777 530 RIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMV--NRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSK 606 (1288)
Q Consensus 530 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 606 (1288)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999998853 6899999999999986 99999999999999999999
Q ss_pred HhcCC
Q 000777 607 LVEDP 611 (1288)
Q Consensus 607 l~~~~ 611 (1288)
+...+
T Consensus 237 ~~~~~ 241 (267)
T PRK15112 237 VLASP 241 (267)
T ss_pred HhcCC
Confidence 98764
No 493
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-39 Score=379.66 Aligned_cols=213 Identities=30% Similarity=0.479 Sum_probs=180.5
Q ss_pred EEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCC----HHHHhcceE
Q 000777 1047 HVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQ----LKWLRQQMG 1122 (1288)
Q Consensus 1047 nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~----~~~lR~~i~ 1122 (1288)
||+++|++ .. + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999963 23 4 999999999999999999999999999999999999999999999986532 345788999
Q ss_pred EEccCCCCch-hhHHHHHhcCCCCCCC----HHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHH
Q 000777 1123 LVSQEPVLFN-DTIRANIAYGKGGDAT----EAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAI 1197 (1288)
Q Consensus 1123 ~V~Qd~~Lf~-gTIreNl~~g~~~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1197 (1288)
||||++.+|. .|++||+.++.. ... ++++.++++..++.+ ........||||||||++|||||
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LSgGqkqRvalAraL 146 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMK-RARPSERRISFERVIELLGIGH-----------LLGRLPGRLSGGEKQRVAIGRAL 146 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhh-ccChhHHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHH
Confidence 9999999997 499999987632 111 223555555555543 34455678999999999999999
Q ss_pred cCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecChhhhhcCCCcH
Q 000777 1198 VKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGKHENLINIPDGF 1274 (1288)
Q Consensus 1198 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~ 1274 (1288)
+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+...
T Consensus 147 ~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 226 (354)
T TIGR02142 147 LSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLP 226 (354)
T ss_pred HcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcc
Confidence 999999999999999999999999999998754 6899999999999865 9999999999999999999999876544
Q ss_pred HH
Q 000777 1275 YA 1276 (1288)
Q Consensus 1275 y~ 1276 (1288)
|.
T Consensus 227 ~~ 228 (354)
T TIGR02142 227 WL 228 (354)
T ss_pred cc
Confidence 43
No 494
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=369.92 Aligned_cols=219 Identities=30% Similarity=0.526 Sum_probs=184.9
Q ss_pred ccEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeeCCCC--C
Q 000777 382 GDIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYD-----PQAGEVLIDGINLKEF--Q 454 (1288)
Q Consensus 382 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~--~ 454 (1288)
..|+++|++++|+. +++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 36999999999963 469999999999999999999999999999999999986 6899999999998643 3
Q ss_pred HHHHhcceEEEcCCCCCCchhHHHHHhcCCCCC--------------C-----HHHHHHHHHHcCHHHHHHhCCCCcccc
Q 000777 455 LQWIRKKIGLVSQEPVLFTGSIKDNIAYGKDDA--------------T-----TEEIRVATELANAAKFIDKLPQGIDTL 515 (1288)
Q Consensus 455 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~--------------~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~ 515 (1288)
...+|+.++||+|++.+|+.||+||+.++.... . ++++.++++.. .+++++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQA-------ALWDEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHc-------CCchhhhHH
Confidence 556788999999999999999999999763210 0 11122222222 223344556
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEE-EEE
Q 000777 516 VGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMI-AVI 593 (1288)
Q Consensus 516 ~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i-~~l 593 (1288)
++..+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 67888999999999999999999999999999999999999999999999998777899999999999876 9997 578
Q ss_pred eCCEEeEecChhHHhcC
Q 000777 594 HRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 594 ~~G~i~~~g~~~~l~~~ 610 (1288)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999998765
No 495
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-40 Score=326.40 Aligned_cols=214 Identities=32% Similarity=0.534 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHHHHhcceE
Q 000777 1043 IELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLKWLRQQMG 1122 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1122 (1288)
+++++++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..|..|++|.|+|||.|+.+. +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 678999999974 33589999999999999999999999999999999999999999999999999774 577899999
Q ss_pred EEccCCCCc-hhhHHHHHhcCC-CCCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHH
Q 000777 1123 LVSQEPVLF-NDTIRANIAYGK-GGDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARA 1196 (1288)
Q Consensus 1123 ~V~Qd~~Lf-~gTIreNl~~g~-~~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1196 (1288)
+++-+.-|+ ..|.||||.|.. ..+.++. ++.+.-+..++.+. +|+.+| +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~-------~~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEY-------LDRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHH-------HHHHHh----hhchhhHHHHHHHHH
Confidence 999777777 569999998641 1123333 33333444444443 244444 699999999999999
Q ss_pred HcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhh-hcCEEEEEeCCEEEEecChhhhhcC
Q 000777 1197 IVKDPKILLLDEATSALDAESERVVQDALDRVMK-NRTTVVVAHRLSTIK-NADMIAVVKNGVIVEKGKHENLINI 1270 (1288)
Q Consensus 1197 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~~ 1270 (1288)
|+++|+|+|||||||+||..+.+.+++-+++... +++||+-||-++.++ -||+|+++.+|+++..|++++|.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999998864 899999999999998 5999999999999999999999865
No 496
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-39 Score=350.24 Aligned_cols=190 Identities=24% Similarity=0.373 Sum_probs=163.7
Q ss_pred EEEEEEEEECCCC-CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCC---CCCceEEECCeeccCCCHHHHh
Q 000777 1043 IELHHVSFKYPSR-PDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYD---PDAGHITLDGVEIQKLQLKWLR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~-~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 1118 (1288)
+.++||+|.|+.. .++++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...|
T Consensus 4 ~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~~ 82 (202)
T cd03233 4 LSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKYP 82 (202)
T ss_pred EEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhhc
Confidence 7899999999853 35579999999999999999999999999999999999999 89999999999998765 4578
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCCCCCCHHHHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHHHHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKGGDATEAEIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRVAIARAI 1197 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1197 (1288)
++++|+||++.+|. .|++||+.++.. .. ..+....||||||||++|||||
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~-------~~----------------------~~~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALR-------CK----------------------GNEFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhh-------hc----------------------cccchhhCCHHHHHHHHHHHHH
Confidence 89999999998886 599999976410 00 1234467999999999999999
Q ss_pred cCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEe-cCchhh-hhcCEEEEEeCCEEEEec
Q 000777 1198 VKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVA-HRLSTI-KNADMIAVVKNGVIVEKG 1262 (1288)
Q Consensus 1198 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~Ia-Hrl~ti-~~~DrI~vl~~G~Ive~G 1262 (1288)
+++|++|||||||++||+++++.+.+.|++..+ ++|+|+++ |+.+.+ +.||+|++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999999998754 46766665 555666 459999999999999865
No 497
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-39 Score=373.97 Aligned_cols=204 Identities=22% Similarity=0.439 Sum_probs=173.0
Q ss_pred CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcCCCCCCch-hHH
Q 000777 399 EQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLQWIRKKIGLVSQEPVLFTG-SIK 477 (1288)
Q Consensus 399 ~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~-ti~ 477 (1288)
+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++||+||++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999875 345567889999999998865 999
Q ss_pred HHHhcCCC--CCCHHHHHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000777 478 DNIAYGKD--DATTEEIRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDA 555 (1288)
Q Consensus 478 ~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illlDEpts~lD~ 555 (1288)
||+.+... ..+..+..+ .+.+.++.+ |+.........+||||||||++|||||+.+|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEE-----RAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99987422 112111111 122344444 555555667789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHHhcC
Q 000777 556 ESEKVVQEALDRIM-VNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKLVED 610 (1288)
Q Consensus 556 ~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 610 (1288)
.+++.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999885 46899999999999976 999999999999999999988654
No 498
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=362.20 Aligned_cols=226 Identities=28% Similarity=0.482 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECC------eeCCCCCHH
Q 000777 383 DIELRDVYFSYPARPNEQIFSGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDG------INLKEFQLQ 456 (1288)
Q Consensus 383 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g------~~~~~~~~~ 456 (1288)
.++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| +++...+..
T Consensus 10 ~i~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIN---DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecC---CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 589999999996 35699999999999999999999999999999999999999997666665 566666677
Q ss_pred HHhcceEEEcCCCCCCch-hHHHHHhcCCCC--C-CHHH----HHHHHHHcCHHHHHHhCCCCccccccCCCCCCChHHH
Q 000777 457 WIRKKIGLVSQEPVLFTG-SIKDNIAYGKDD--A-TTEE----IRVATELANAAKFIDKLPQGIDTLVGEHGTQLSGGQK 528 (1288)
Q Consensus 457 ~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~-~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 528 (1288)
.+|++++|++|+|.+|.+ |++||+.++... . ..++ +.++++..++.+++ ....+..+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHH
Confidence 788899999999999875 999999975321 1 1222 22222322221111 1234567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCEEeEecChhHH
Q 000777 529 QRIAIARAILKDPRILLLDEATSALDAESEKVVQEALDRIMVNRTTVIVAHRLSTVRN-ADMIAVIHRGKIVEKGTHSKL 607 (1288)
Q Consensus 529 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 607 (1288)
||++||||++.+|+++||||||++||+.+++.+.+.|.++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999965 999999999999999999999
Q ss_pred hcCCCchHHHH
Q 000777 608 VEDPEGAYSQL 618 (1288)
Q Consensus 608 ~~~~~~~~~~~ 618 (1288)
.+++...|.+.
T Consensus 240 ~~~~~~~~~~~ 250 (257)
T PRK14246 240 FTSPKNELTEK 250 (257)
T ss_pred HhCCCcHHHHH
Confidence 87655445443
No 499
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.2e-39 Score=355.35 Aligned_cols=205 Identities=33% Similarity=0.464 Sum_probs=173.9
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCeeccCCCHH---HHh
Q 000777 1043 IELHHVSFKYPSRP-DVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVEIQKLQLK---WLR 1118 (1288)
Q Consensus 1043 I~~~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1118 (1288)
++++||+++|++.. ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|++||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996421 14699999999999999999999999999999999999999999999999999876643 468
Q ss_pred cceEEEccCCCCch-hhHHHHHhcCCC--CCCCHH----HHHHHHHHhchhHHHHhhhccccccccCCCCCCChhHHHHH
Q 000777 1119 QQMGLVSQEPVLFN-DTIRANIAYGKG--GDATEA----EIQAASEMANAHKFICSLQQGYDTMVGERGLQLSGGQKQRV 1191 (1288)
Q Consensus 1119 ~~i~~V~Qd~~Lf~-gTIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQrQrl 1191 (1288)
+.++|+||++.+|. .|+.||+.++.. ...+.+ ++.++++..++.+++ .....+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHL-----------DYYPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHH
Confidence 89999999999987 799999986421 112222 344555555554443 344468999999999
Q ss_pred HHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhhcCEEEEEeCCEE
Q 000777 1192 AIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKNADMIAVVKNGVI 1258 (1288)
Q Consensus 1192 aiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1258 (1288)
+||||++++|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998763 7999999999997777999999999986
No 500
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.3e-39 Score=361.16 Aligned_cols=228 Identities=29% Similarity=0.453 Sum_probs=183.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCceEEECCee-----ccCCCHHH
Q 000777 1042 EIELHHVSFKYPSRPDVQVFRDLNLKIRAGKTVALVGESGSGKSTVVSLLQRFYDPDAGHITLDGVE-----IQKLQLKW 1116 (1288)
Q Consensus 1042 ~I~~~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~~~~ 1116 (1288)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYGG---GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeCC---ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 4899999999963 358999999999999999999999999999999999999999999999988 76666543
Q ss_pred ----HhcceEEEccCCC--C-chhhHHHHHhcCC--CCCCCHHHHHHHHHHhchhHHHHhhhcccc-ccccCCCCCCChh
Q 000777 1117 ----LRQQMGLVSQEPV--L-FNDTIRANIAYGK--GGDATEAEIQAASEMANAHKFICSLQQGYD-TMVGERGLQLSGG 1186 (1288)
Q Consensus 1117 ----lR~~i~~V~Qd~~--L-f~gTIreNl~~g~--~~~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgG 1186 (1288)
+++.++|++|++. + +..|+.+|+.+.. .......+. ...+.+++..+ |++ +........||||
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG 152 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGG 152 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHH
Confidence 3467999999984 2 3458888875310 000011111 11223444444 232 3456667899999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 000777 1187 QKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMK--NRTTVVVAHRLSTIKN-ADMIAVVKNGVIVEKGK 1263 (1288)
Q Consensus 1187 QrQrlaiARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~Gt 1263 (1288)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 153 ~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 153 MQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999988643 7899999999999975 99999999999999999
Q ss_pred hhhhhcCCCcHHHHHH
Q 000777 1264 HENLINIPDGFYASLI 1279 (1288)
Q Consensus 1264 ~~eLl~~~~g~y~~L~ 1279 (1288)
++++..++...|.+++
T Consensus 233 ~~~~~~~~~~~~~~~~ 248 (253)
T TIGR02323 233 TDQVLDDPQHPYTQLL 248 (253)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 9999876555565543
Done!