BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000778
         (1288 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana GN=MSH6 PE=1
            SV=2
          Length = 1324

 Score = 1674 bits (4335), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 866/1345 (64%), Positives = 1025/1345 (76%), Gaps = 78/1345 (5%)

Query: 1    MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
            MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S      +   P           
Sbjct: 1    MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60

Query: 50   ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
                        NPNP+SN     SPSP P TPSP+QS  KK  LVIGQTPSPP S    
Sbjct: 61   PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116

Query: 98   AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
              +YG++V+ K++RVYWPLDK WY+G V  +DK   KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117  VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176

Query: 158  --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
              ++S     RL+R   + +KVV +  DD EM NVE++ SD    S +D W KNVGKE  
Sbjct: 177  VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDDSSDED-WGKNVGKEVC 235

Query: 212  -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
             SE+++V+LVDE E                 N+V +   RKRK+S      G KKSK+D 
Sbjct: 236  ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295

Query: 246  NAVNADFKSPIIKPVKIFG-SDKLSNGF-DNPVMGDVSERFSAREADKFHFLGPDRRDAK 303
              +   FK+ +++P K  G +D++  G  DN + GD   RF AR+++KF FLG DRRDAK
Sbjct: 296  GTILKGFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFLGVDRRDAK 355

Query: 304  RRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHV 363
            RRRP D  YDPRTLYLPPDF++ L+ GQ+QWWEFK+KHMDKV+FFKMGKFYELFEMDAHV
Sbjct: 356  RRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHV 415

Query: 364  GAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
            GAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE GSK
Sbjct: 416  GAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSK 475

Query: 424  DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
            DKVVKRE+CAVVTKGTLT+GE+L  NPDASYLMALTE  +S  + + +  FG+C+VDVAT
Sbjct: 476  DKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAEHNFGVCLVDVAT 535

Query: 484  SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
             +IILGQ  DD DCS L CLLSE+RPVEIIKPA +LS  TER I+R TRNPLVN+LVPLS
Sbjct: 536  QKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS 595

Query: 544  EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
            EFWD+E T+ E+  IY RI  +    + +  +  +  GDG + LP +LSEL +   +GS 
Sbjct: 596  EFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKMLSELATEDKNGSL 652

Query: 604  VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
             LSALGG ++YL+++FLDE+LLRFAKFE LP   F ++ +K +MVLDA ALENLE+FENS
Sbjct: 653  ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 712

Query: 664  RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
            R+G  SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA LRG N P++LEF
Sbjct: 713  RNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLEF 772

Query: 724  RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
            RK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS L GCE M +ACS
Sbjct: 773  RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACS 832

Query: 784  SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
            SL AIL++  SR+L H+LTPG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD
Sbjct: 833  SLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYD 892

Query: 844  SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
             ACK V+E E+SL KHLKEQRKLLGD SI YVT+GKD YLLEVPESL GSVP DYEL SS
Sbjct: 893  CACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSS 952

Query: 904  KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
            KKG  RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH  KWRQ+V+ATAELD 
Sbjct: 953  KKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDV 1012

Query: 964  LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
            LISLA ASD YEG  CRPVI  S S+  P++SA  LGHPVLR DSLG+G FVPN++ IGG
Sbjct: 1013 LISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGG 1072

Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
               ASFILLTGPNMGGKSTLLRQVCLAVILAQ+GADVPAE FE+SPVD+I VRMGAKDHI
Sbjct: 1073 AEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHI 1132

Query: 1084 MAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRG 1143
            MAGQSTFLTELSETA+ML+SATRNSLVVLDELGRGT+TSDGQAIAESVLEHF+ KVQCRG
Sbjct: 1133 MAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRG 1192

Query: 1144 LFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARL 1203
             FSTHYHRL+VDY+ +P+VSLCHMACQ+G G+GGVEEVTFLYRL+PGACPKSYGVNVARL
Sbjct: 1193 FFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARL 1252

Query: 1204 AGIPDKVLQKAVAKSTEFEAIYGKHKKESEENLPADHCVDHMVVLIQSLLNFTANLSCQK 1263
            AG+PD VLQ+AV KS EFEA+YGK+ +++      DH +  M+  I S +   ++ S  K
Sbjct: 1253 AGLPDYVLQRAVIKSQEFEALYGKNHRKT------DHKLAAMIKQIISSVASDSDYSASK 1306

Query: 1264 SSEGDGVTCLTELQRQAGLFFAQQN 1288
             S       L EL   A  F    N
Sbjct: 1307 DS-------LCELHSMANTFLRLTN 1324


>sp|P54276|MSH6_MOUSE DNA mismatch repair protein Msh6 OS=Mus musculus GN=Msh6 PE=1 SV=3
          Length = 1358

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/1133 (38%), Positives = 619/1133 (54%), Gaps = 94/1133 (8%)

Query: 152  EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
            E  E  Q SV   +R  R   K+ V+ D E ++   + E   D + + S DD +  VG  
Sbjct: 226  ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 285

Query: 210  DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
            D    E++    +   K  R    +    +KS  K  G+A  A   +PI+   K      
Sbjct: 286  D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 334

Query: 268  LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
              + F  P   +     S    D       +H    +L P+ RRD  RRRP    ++P T
Sbjct: 335  TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 394

Query: 317  LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
            LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G  EL L +MKG 
Sbjct: 395  LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 454

Query: 377  QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
              H GFPE  F    + L +KGY+V  VEQTETPE +E R ++    SK D+VV+REIC 
Sbjct: 455  WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 514

Query: 434  VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
            ++TKGT T   +L  +P    + YL++L E  +  +  +  R +G+C VD +  +  +GQ
Sbjct: 515  IITKGTQTYS-VLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 571

Query: 491  VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
              DD  CS    L++   PV+I+     LS ET+  +     + L   L+P S+FWDA  
Sbjct: 572  FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 631

Query: 551  TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
            T+             +L +      N    GD  T LP +L  + S  DS          
Sbjct: 632  TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 675

Query: 603  QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
              LSALGG +FYLKK  +D+ LL  A FE            + P + F   +++  MVLD
Sbjct: 676  LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 733

Query: 651  APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
            A  L NLE+F N  +G + GTL  +L+ C T FGKRLL+ WL  PL +   I +R DAV 
Sbjct: 734  AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 793

Query: 711  GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQL 765
             L  V      E    L +LPD+ERLL+++    S    +N   ++ ++YE+   +KK++
Sbjct: 794  DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 852

Query: 766  QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
             +F+SAL G ++M +    L  +     S+ L  ++T     P    P + + L+ +  A
Sbjct: 853  IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 912

Query: 821  FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
            FD  +A  +G I P  G D DYD A   ++E E SL ++L +QR  LG  SI Y  IG++
Sbjct: 913  FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 972

Query: 881  LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
             Y LE+PE+    ++P +YEL+S+KKG  RYWT  I+K L  L  AE  ++++LK  ++R
Sbjct: 973  RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1032

Query: 940  LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSL 999
            L   F ++H  W+  V   A LD L+ LA  S   +GP CRP I+    +  P++  K  
Sbjct: 1033 LFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPFLEFKGS 1092

Query: 1000 GHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
             HP +     G  +F+PNDI IG       HG A  +L+TGPNMGGKSTL+RQ  L  ++
Sbjct: 1093 RHPCITKTFFGD-DFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVM 1151

Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLD 1113
            AQ+G  VPAE   ++PVDR+F R+GA D IM+G+STF  ELSETA +L  AT +SLV++D
Sbjct: 1152 AQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVD 1211

Query: 1114 ELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDYKKDPRVSLCHMACQVGN 1173
            ELGRGT+T DG AIA +V++     ++CR LFSTHYH L  DY K   V L HMAC V N
Sbjct: 1212 ELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKSVCVRLGHMACMVEN 1271

Query: 1174 GVG--GVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKSTEFEAI 1224
                   E +TFLY+   GACPKSYG N ARLA +P++V+QK   K+ EFE +
Sbjct: 1272 ECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERM 1324


>sp|P52701|MSH6_HUMAN DNA mismatch repair protein Msh6 OS=Homo sapiens GN=MSH6 PE=1 SV=2
          Length = 1360

 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/1091 (38%), Positives = 609/1091 (55%), Gaps = 71/1091 (6%)

Query: 190  ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
            ISD  SD    D   K   KE+ S DE    V + E+       KV R RKR  +G   +
Sbjct: 251  ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310

Query: 239  KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
            K+  S     +A  ++  I       ++ F + + S    +   G D S R +    +  
Sbjct: 311  KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370

Query: 293  HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
             +L  + RRD  RRRP    +D  TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371  EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430

Query: 352  KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
            KFYEL+ MDA +G  EL L +MKG   H GFPE  F    + L +KGY+V  VEQTETPE
Sbjct: 431  KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490

Query: 412  QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
             +E R ++       D+VV+REIC ++TKGT T   +L  +P    + YL++L E  +  
Sbjct: 491  MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549

Query: 466  ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
            +  +  R +G+C VD +  +  +GQ  DD  CS    L++   PV+++     LS ET+ 
Sbjct: 550  SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607

Query: 526  AILRHTRNPLVNDLVPLSEFWDAETTV---LEIKNIYNRITAESLNKADSNVANSQAEGD 582
             +       L   L+P S+FWDA  T+   LE +    +++          +    +E D
Sbjct: 608  ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667

Query: 583  GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
             +   PG  SEL          LSALGG +FYLKK  +D+ LL  A FE         + 
Sbjct: 668  SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718

Query: 635  CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
             +  G +  K Y  MVLDA  L NLE+F N  +G + GTL  +++ C T FGKRLL+ WL
Sbjct: 719  TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778

Query: 693  ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
              PL N   I +R DA+  L  V    + E  + L +LPD+ERLL+++    S    +N 
Sbjct: 779  CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837

Query: 751  -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
              ++ ++YE+   +KK++ +F+SAL G ++M +    +  + +  +S+ L  +++     
Sbjct: 838  PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897

Query: 803  PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
            P    P +   L  +  AFD  +A  +G I P  G D DYD A   ++E E SL ++L++
Sbjct: 898  PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957

Query: 863  QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
            QR  +G  +I Y  IG++ Y LE+PE+    ++P +YEL+S+KKG  RYWT  I+K L  
Sbjct: 958  QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017

Query: 922  LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
            L  AE  ++ +LK  ++RL   F +++  W+  V   A LD L+ LA  S   +GP CRP
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1077

Query: 982  VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
            VIL    +  P++  K   HP +     G  +F+PNDI IG       +G A  +L+TGP
Sbjct: 1078 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1135

Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
            NMGGKSTL+RQ  L  ++AQ+G  VPAE+  ++P+DR+F R+GA D IM+G+STF  ELS
Sbjct: 1136 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1195

Query: 1096 ETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVD 1155
            ETA +L  AT +SLV++DELGRGT+T DG AIA +V++     ++CR LFSTHYH L  D
Sbjct: 1196 ETASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVED 1255

Query: 1156 YKKDPRVSLCHMACQVGNGVG--GVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQK 1213
            Y ++  V L HMAC V N       E +TFLY+   GACPKSYG N ARLA +P++V+QK
Sbjct: 1256 YSQNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQK 1315

Query: 1214 AVAKSTEFEAI 1224
               K+ EFE +
Sbjct: 1316 GHRKAREFEKM 1326


>sp|Q9VUM0|MSH6_DROME Probable DNA mismatch repair protein Msh6 OS=Drosophila melanogaster
            GN=Msh6 PE=1 SV=2
          Length = 1190

 Score =  569 bits (1466), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 364/969 (37%), Positives = 528/969 (54%), Gaps = 77/969 (7%)

Query: 291  KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
            K  FL PD+ +D + RRP    YD  TL++P  FL  LS G +QWW  KS + D V+FFK
Sbjct: 224  KLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 283

Query: 350  MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
            +GKFYEL+ MDA VG  EL   YM+GE  H GFPE +F      L  +G++V  VEQTET
Sbjct: 284  VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVDRGFKVARVEQTET 343

Query: 410  PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSP 465
            P+ +  R K  K +K DKVV REIC +  +GT   G      P+   +Y++A+ E ++  
Sbjct: 344  PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEKDEGT 403

Query: 466  ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
             S+     +G+C +D +     LG+  DD +CS L  L+S   PV  +   + LS  T++
Sbjct: 404  CSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQ 458

Query: 526  AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
             I+R     ++ + VP +      AE T   +K +  R  A     +D N    +   Q+
Sbjct: 459  -IVRTVLGGILKEPVPGNGKHACSAEKT---LKLLAERYYAGP--GSDDNWPLVLRTMQS 512

Query: 580  EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
            + D L   P          D+    L ALG  +F++ K  L+  +L  A+++L +P    
Sbjct: 513  DMDHLGLTPN---------DNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 563

Query: 639  GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
             D         ++ +MVLDA  L NL +     S      L + L+HC T FGKRLL  W
Sbjct: 564  ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 617

Query: 692  LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
            L  P  +  +I+ERQDA+  L  +  P  L E R  L+ +PD ER LA+  LF + +   
Sbjct: 618  LCAPSCDVSVIKERQDAIGEL--IRMPTELQEVRALLAPMPDFERNLAQIHLFGNKQIKQ 675

Query: 749  RN--SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
             +   ++ +L+E+    K++LQ F++ L G   + +   ++    + T  +++  +   G
Sbjct: 676  MDHPDSRAILFEEKLYNKQKLQGFMAVLKGFNDLTK-LPTMFHQCKTTLLKRITQLPESG 734

Query: 805  KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
               P +   L++F  AFD   A  +G I P  G+D +YD+A   + E+E  L  +L EQ 
Sbjct: 735  GSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLKTYLVEQE 794

Query: 865  KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLGE 921
            +  G   ITY    K  Y L+VPES      + Y L    KG     RY T   + LL +
Sbjct: 795  RHFG-CRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKPSRRYTTAETRALLKD 853

Query: 922  LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP---T 978
            +  AE  +   LK + +RL  +F  H+++W+Q +   A LD L SLA     Y G     
Sbjct: 854  MQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVLGSLAE----YAGQQMVI 909

Query: 979  CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
            C P ++     ++P+I  +   HP   + +     ++PN + +G    A   LLTGPNMG
Sbjct: 910  CVPELVSDA--DQPFIQLEEGYHPCANAST-----YIPNGLELGTASEAPLSLLTGPNMG 962

Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
            GKSTL+R+V L VI+AQ+GA +PA    +S VDRIF R+GA+D I+AG STFL EL+ET+
Sbjct: 963  GKSTLMREVGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETS 1022

Query: 1099 LMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDYKK 1158
            L+L  AT +SLV+LDELGRGT+T DG AIA SV+ +F+  ++CR LFSTHYH L   +  
Sbjct: 1023 LILKHATCHSLVLLDELGRGTATYDGTAIAASVV-NFLANLKCRTLFSTHYHNLIDFFHN 1081

Query: 1159 DPRVSLCHMACQVGNGVGG---VEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAV 1215
            D R++L HMAC V N        E VTFLY+ + GACPKSYG N A+LAG+P  ++++A 
Sbjct: 1082 DKRITLGHMACMVENEDNADPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAY 1141

Query: 1216 AKSTEFEAI 1224
              S + EAI
Sbjct: 1142 ELSKKVEAI 1150


>sp|O74502|MSH6_SCHPO DNA mismatch repair protein msh6 OS=Schizosaccharomyces pombe (strain
            972 / ATCC 24843) GN=msh6 PE=1 SV=1
          Length = 1254

 Score =  527 bits (1357), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 362/1067 (33%), Positives = 559/1067 (52%), Gaps = 87/1067 (8%)

Query: 169  RDSFKKVVVEDDEEMENVE-DEISDDRSDSSDDDWNKNVGKEDV-SEDEEVDLVDEQENK 226
            + S  K +V DDE  + VE D IS+  S++S       +  ++V S DE+VD   +    
Sbjct: 217  KGSRHKRIVSDDESDDYVEPDHISEASSEAS-------LPIDEVESMDEDVDGYSDHSVS 269

Query: 227  VLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPV-KIFGSDKLSNGFDNPVMGDVSERFS 285
            V     +K S  +K  S+    +    S I  P   + GS   +    N V+    +R  
Sbjct: 270  VAAPIPKKES--RKESSNSLYESYRLGSQIASPSPSVSGSASPTKSNKNGVLNREEKRRQ 327

Query: 286  AREA------DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
              EA      +++ +L  D RDA + R GD  YDPRTLY+PP         +KQ+W+ K 
Sbjct: 328  RMEAFKKENNERYEWL-LDVRDADQNRVGDPNYDPRTLYIPPSAWATFKPFEKQFWKIKK 386

Query: 340  KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
              MD V+FF+ GKFYEL+E DA +G +   L+   +      G PE +F     +   KG
Sbjct: 387  DLMDTVVFFQKGKFYELYENDAAIGHQVFSLKLTDRVNMKMVGIPEASFDYWASQFIAKG 446

Query: 399  YRVLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
            YR+  V+Q ET    E++ +++  K+ KVV+R +  V+T GTL +  +L+++  ++Y MA
Sbjct: 447  YRIARVDQLETALGKEIKDRQRTQKEEKVVQRGLTQVLTSGTLVDEAMLTSDL-STYCMA 505

Query: 458  LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
            + ES QS   + +   FGIC +D +T    + +  DD+  + L  LL+++RP E+I   +
Sbjct: 506  IKESLQSDNEEPS---FGICFIDTSTGGFHMCEFTDDIHRTKLDTLLTQVRPKELILEKS 562

Query: 518  MLSPETERAILRH-TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
             +S ++ RAI    + + + N + P +EFWD E    EI      I  +           
Sbjct: 563  KISQKSIRAIKYCVSSSSIWNFIKPYTEFWDNERVEREI------IAGDYFK-------- 608

Query: 577  SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
                 +GL   P IL   +S        +SA G   +YL++  LD+ +     F+    S
Sbjct: 609  -----NGLEGAPKILKSYLS---EKPLAISAFGALFWYLRQLKLDKDMCSMGNFDEYDAS 660

Query: 637  GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
                  +   ++++   L+NLE+F NS  G S GTL+  L  CVT FGKRL  TWL  PL
Sbjct: 661  -----QQSTSLLMNGQTLKNLEIFSNSFDGGSEGTLFHLLCRCVTPFGKRLFHTWLCHPL 715

Query: 697  YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
             +   I  R D V  L   N          L +LPD+ERL++R+ A     GR+      
Sbjct: 716  RSGTAINARLDVVE-LIADNPVIRDTIWGFLHKLPDLERLISRVHA-----GRS------ 763

Query: 757  YEDAAKKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILTPGKGLPAIVSILK 815
                   +  +F+  L G + ++ A   L    +E  E   L  I+   +  P +   L+
Sbjct: 764  -------KPADFVRVLEGFQRINSAFDQLREEFMEVAEGTLLGEII---QSAPNMKEELE 813

Query: 816  HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
             +  AF+W +A+  G   P  G + +YD++ K   E++  L   L++ +K L  +S+ + 
Sbjct: 814  AWTRAFNWQKASEEGVFEPEIGFEAEYDTSQKYQSELKNELYALLEQYKKQLRCSSLNFK 873

Query: 876  TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
             IGK++Y +EVP  ++  VP ++   S  K   RY+   ++K + +L +AE    + +  
Sbjct: 874  NIGKEVYQVEVPSDVK--VPVNWCKMSGTKKTNRYYNDELRKKIKKLLEAEELHLAIMSR 931

Query: 936  ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
            + ++   +F  ++ +W  ++  TA +D   SL+ A+     P CRP I++    ++ ++ 
Sbjct: 932  MQEKFYIRFDSNYEQWLALIKYTASIDCFFSLSQAAAALGEPYCRPEIIE---QKDGHLY 988

Query: 996  AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
             + L HP + + +     FVPND+ +GG  + + I+LTGPNM GKSTLLRQVC+AVI+AQ
Sbjct: 989  FEELRHPCINASAAST--FVPNDVVLGGE-SPNMIVLTGPNMAGKSTLLRQVCIAVIMAQ 1045

Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDEL 1115
            +G  VPA+   I+P+  I+ R+GA D IM+ +STF+ ELSET  +L      SLV+LDEL
Sbjct: 1046 LGCWVPAKRASITPMTSIYTRLGANDDIMSARSTFMVELSETKKILDECGPKSLVILDEL 1105

Query: 1116 GRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGV 1175
            GRGTST DG AIA +VL H V  + C G FSTHY  L VD+    +V L  MA  V    
Sbjct: 1106 GRGTSTYDGHAIAYAVLHHLVSNIGCLGFFSTHYQSLCVDFMHHRQVRLMQMAAAVDE-- 1163

Query: 1176 GGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKSTEFE 1222
              +  VTFLY+L  G CPKSYG+NVA +AG+P+KV+  A  K++E E
Sbjct: 1164 -KIRRVTFLYKLEDGICPKSYGMNVASMAGLPEKVIDAAEEKASELE 1209


>sp|Q55GU9|MSH6_DICDI DNA mismatch repair protein Msh6 OS=Dictyostelium discoideum GN=msh6
            PE=3 SV=1
          Length = 1260

 Score =  508 bits (1308), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 314/926 (33%), Positives = 501/926 (54%), Gaps = 73/926 (7%)

Query: 312  YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
            YD RTL++P   L   S  ++Q+W+ KSK+ D V+FFK GKFYEL+E DA +G ++L L+
Sbjct: 345  YDKRTLHIPASCLSKFSPFERQFWDIKSKNYDTVVFFKKGKFYELYESDADIGHQQLHLK 404

Query: 372  YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVV 427
               +      G PE +F+    KL   G++V  V+Q ET   +  R+ EKG    KD ++
Sbjct: 405  LTDRVNMRMVGVPEMSFNHWASKLIHLGHKVAKVDQMETSIGMAKRQNEKGGRNKKDSII 464

Query: 428  KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
            +RE+ +++T GTL + ++++ +  ++YLMA+ E+         D+ +G+C VDV+     
Sbjct: 465  QRELTSILTAGTLLDEQMIT-DQTSTYLMAIKENEY-------DKQYGVCFVDVSIGEFY 516

Query: 488  LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR--HTRNPLVNDLVPLSEF 545
            L  + DD +      LL ++ P EI+      SP+T   + R   T  P++N  + L E+
Sbjct: 517  LCTIQDDDNRMQFETLLLQMMPKEIVYEKGATSPKTISIMKRVLSTVKPVMNARLSL-EY 575

Query: 546  WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
            WD   T+  I  +    T E+L +  +                               ++
Sbjct: 576  WDPTDTMERITQLCGGKTPETLCQMKNE----------------------------EYLM 607

Query: 606  SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
             ALGG + YL    +  +++  A+F+       G+      M+LD   L NLE+F NS  
Sbjct: 608  GALGGCISYLMDIKIGNSVVEQARFKRFNPLDIGNS-----MILDGQCLVNLEIFNNSTD 662

Query: 666  GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
            G + GTL+  ++ C TAFGKR+ R W+ RPL N   I +RQ A+  LR  + P  L+   
Sbjct: 663  GSTEGTLFKLMDRCTTAFGKRMFRQWICRPLANKNAIVDRQKAIEFLR--DSPETLQKVT 720

Query: 726  A-LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ-----EFISALH--GCEL 777
            A L++LPD+ER++AR+ A +       + +  +++   K L+     E I ++H   C  
Sbjct: 721  AILNKLPDLERMIARIRAQTSKISDLISVLNHFDNIHSKLLELLDEAEQIESIHLRSCLF 780

Query: 778  MDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
            MD    +      + +    ++      G P +   ++  + +F  +E +   R++P  G
Sbjct: 781  MDNQQDNDDI---DEQENSNNNNNIRYSGYPNLKPYIERVRKSFT-IEQD---RVVPSKG 833

Query: 838  VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
            + +++D     ++ +E S  KHL+EQ+       I Y  +GK++Y +E+P +    +P  
Sbjct: 834  LFLEFDQCLGNIQSLEQSFAKHLEEQKAHFKCNKIEYKHMGKEIYQIEIPVAFTKKLPAG 893

Query: 898  YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
            + L+SS     RY +P + K L  L +     E   K +L++++  F  + N ++  +  
Sbjct: 894  FSLKSSSSKVNRYHSPFVTKNLTSLLEERDTYEVLSKEVLKKILSNFAIYFNHFQIAITK 953

Query: 958  TAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPN 1017
             ++LD L+SL   S       CRP+ + S  ++  +I  K + HP + S S    +F+PN
Sbjct: 954  LSQLDCLLSLYKVSFQSSIQMCRPLFVSS--DQRGFIDVKDMRHPCIYSKS--GDDFIPN 1009

Query: 1018 DITIGGHGNA-SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
            DI++    N  S ++LTGPNMGGKSTLLRQ C+ VI+AQ+G  V A   E+S VDRIF R
Sbjct: 1010 DISLNTENNPPSLMVLTGPNMGGKSTLLRQSCILVIMAQMGCYVSASSCEMSIVDRIFTR 1069

Query: 1077 MGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFV 1136
            +GA D+I+AGQSTF+ EL+ET+ +L  AT+ SLV+LDELGRGTST DG +IA SVL +  
Sbjct: 1070 LGANDNILAGQSTFMVELAETSAVLKYATKRSLVILDELGRGTSTFDGYSIAYSVLNYLA 1129

Query: 1137 HKVQCRGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSY 1196
             KVQ   +F+THY  LA +      +S  +M C V       ++V FLY+L+ G CP SY
Sbjct: 1130 TKVQSMCIFATHYQSLAYEPTVRDLISTAYMTCHVDE---EAKKVIFLYKLASGVCPNSY 1186

Query: 1197 GVNVARLAGIPDKVLQKAVAKSTEFE 1222
            G++VA +AG+P +++ KA  KST+ E
Sbjct: 1187 GLHVASMAGLPREIITKAEEKSTQME 1212


>sp|Q03834|MSH6_YEAST DNA mismatch repair protein MSH6 OS=Saccharomyces cerevisiae (strain
            ATCC 204508 / S288c) GN=MSH6 PE=1 SV=1
          Length = 1242

 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 314/965 (32%), Positives = 499/965 (51%), Gaps = 90/965 (9%)

Query: 275  PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
            P     S +F+ +  +++ +L  D RDA+RR   D  YDPRTLY+P       +  +KQ+
Sbjct: 260  PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318

Query: 335  WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
            WE KSK  D ++FFK GKF+EL+E DA +     DL+   G + +    G PE +F    
Sbjct: 319  WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378

Query: 392  EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
             +  + GY+V  V+Q E+    E+R   KG    +VKRE+  ++T GTLT+G++L ++  
Sbjct: 379  AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433

Query: 452  ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
            A++ +A+ E      N++    ST       + FG   +D AT  + + +  DD +C+ L
Sbjct: 434  ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493

Query: 501  CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
              L+S++RP+E++   N LS    + +      N + N++    EF+D + T  EI    
Sbjct: 494  DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549

Query: 560  NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
              I++E  +  +                P +L    S  D+G +V  SA GG L+YLK  
Sbjct: 550  --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590

Query: 619  FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
             LD+ L+     +        D  K  + MVLD   L+NLE+F NS  G   GTL+   N
Sbjct: 591  KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644

Query: 678  HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
              +T  GKR+++ WL  PL     I  R D+V  L    Q   L  +     S+LPD+ER
Sbjct: 645  RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701

Query: 736  LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
            +LAR+  S     ++  KV+     A + + E   +L   +L       + +  E     
Sbjct: 702  MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751

Query: 796  QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
                          +V  +K + +AF+  +A N   I+P  G D+++D +  +++E+E  
Sbjct: 752  -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798

Query: 856  LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
            L + L   RK    ++I Y   GK++Y +E+P S   +VP ++   ++ K + RY++  +
Sbjct: 799  LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858

Query: 916  KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFY 974
            + L   +++A+   ++  + +  RL  +F  H+N  W   + A + +D L+++   S++ 
Sbjct: 859  RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYL 918

Query: 975  EGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
              P+CRP I+D   ++       ++  KSL HP     +    +F+PNDI +G       
Sbjct: 919  GAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKE-QPRL 977

Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
             LLTG N  GKST+LR  C+AVI+AQ+G  VP E   ++P+DRI  R+GA D+IM G+ST
Sbjct: 978  GLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1037

Query: 1090 FLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHY 1149
            F  EL+ET  +L  AT  SL+V+DELGRG S+SDG AIAESVL H    +Q  G F+THY
Sbjct: 1038 FFVELAETKKILDMATNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHY 1097

Query: 1150 HRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDK 1209
              LA  +K  P+V    M+  V         VTFLY++  G    S+G++VA + GI  +
Sbjct: 1098 GTLASSFKHHPQVRPLKMSILVDE---ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKE 1154

Query: 1210 VLQKA 1214
            ++  A
Sbjct: 1155 IIDNA 1159


>sp|P20585|MSH3_HUMAN DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4
          Length = 1137

 Score =  336 bits (861), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 264/927 (28%), Positives = 443/927 (47%), Gaps = 88/927 (9%)

Query: 333  QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
            Q+ E K +H D V+  + G  Y  F  DA + A+EL++  ++         P     ++V
Sbjct: 235  QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294

Query: 392  EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
             +L  KGY+V VV+QTET       +    ++  +  R++ A+ TK TL   ++      
Sbjct: 295  RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350

Query: 446  --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
                    +  +   SYL+ ++E+ ++   +     F GI  V  AT  ++     D   
Sbjct: 351  DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410

Query: 497  CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
             S L   +S L+PVE++ P+  LS +TE  I R T   + +D +           V  + 
Sbjct: 411  RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 459

Query: 557  NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
            NIY   +  +        A    +  G   + GI+       +    V+ +L   + YLK
Sbjct: 460  NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 511

Query: 617  KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
            +  L++ L +   F+ L        +K  +M ++   L NLE+ +N     + G+L   L
Sbjct: 512  EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564

Query: 677  NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
            +H  T+FG+R L+ W+ +PL     I  R DAV+ +         +    L +LPD+ER 
Sbjct: 565  DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624

Query: 737  LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
            L  ++               ++  + ++    +  L+  +   QA   + A+  + +S  
Sbjct: 625  LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667

Query: 797  LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
            L  ++     +P ++S ++H+    +   A    +      +  D+    K+  EI+  +
Sbjct: 668  LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723

Query: 857  TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
             +   HL+E RK+L + S  YVT+    +++E+  S    +P D+    S K   R+ +P
Sbjct: 724  DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783

Query: 914  NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
             I +    L+Q   +      +     + +F EH++   + V   A +D + SLA  +  
Sbjct: 784  FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 842

Query: 974  YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
             +G  CRP +      EE  I  K+  HPV+      + ++VPN+  +    +   +++T
Sbjct: 843  -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 895

Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
            GPNMGGKS+ ++QV L  I+AQ+G+ VPAE   I  VD IF RMGA D+I  GQSTF+ E
Sbjct: 896  GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEE 955

Query: 1094 LSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLA 1153
            L++TA ++  AT  SLV+LDELGRGTST DG AIA + LE+F+  V+   LF THY  + 
Sbjct: 956  LTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVC 1015

Query: 1154 -VDYKKDPRVSLCHMACQVGNGV-----GGVEE----VTFLYRLSPGACPKSYGVNVARL 1203
             ++     +V   HM   V         G  E+    VTFLY+++ G   +SYG+NVA+L
Sbjct: 1016 ELEKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKL 1075

Query: 1204 AGIPDKVLQKAVAKSTEFEAIYGKHKK 1230
            A +P ++L+KA  KS E E +    +K
Sbjct: 1076 ADVPGEILKKAAHKSKELEGLINTKRK 1102


>sp|Q0UXL8|MSH3_PHANO DNA mismatch repair protein MSH3 OS=Phaeosphaeria nodorum (strain
            SN15 / ATCC MYA-4574 / FGSC 10173) GN=MSH3 PE=3 SV=3
          Length = 1119

 Score =  322 bits (825), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 266/920 (28%), Positives = 433/920 (47%), Gaps = 83/920 (9%)

Query: 333  QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
            Q+ + K KHMD VI  ++G  ++ F  DA   +KEL +  + G     E P         
Sbjct: 224  QYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKELGIVCIPGKFRYDEHPSEAHYDRFA 283

Query: 380  -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
               FP     ++V++L +  ++V VV Q ET       +    +++    R++  + TKG
Sbjct: 284  SASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL----KAAGNNRNTPFVRKLTNLYTKG 339

Query: 439  TLT---EG-ELLSANPDAS-YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
            T     EG E  +A   A+ YL+ +TE+N            G+  V  AT  II     D
Sbjct: 340  TYVDDIEGLETPTAGAQATGYLLCVTETNAKGWGTDEKVQVGLVAVQPATGDIIYDDFED 399

Query: 494  DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
                S +   L  + P E +   + LS  T++ ++ H      N     S     E    
Sbjct: 400  GFMRSEIETRLLHIAPAEFLIVGD-LSKATDK-LIHHLSASKTNVFGDRSRVERVEKPKT 457

Query: 554  EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
                 Y+ I+    +K  S+      +G        IL ++    +  +  LSA+   + 
Sbjct: 458  MAAQAYSHISNFYADKMKSSQEGGSEQG-------AILDKVHQLSEHVTICLSAM---IT 507

Query: 614  YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
            YL    L E +    K+       F   + + YM+L+   L +LE+++N     S G+L+
Sbjct: 508  YLSDYAL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDYTSKGSLF 559

Query: 674  AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SRLP 731
              ++   T FG+RLLR W+ RPL +   + ER  AV  L+      A++  K L      
Sbjct: 560  WTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEELKEGEHTIAVDKVKFLLGKIKT 619

Query: 732  DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAIL 789
            D+E++L R++    +       + + +D A + L        G    L+ +A S++  I 
Sbjct: 620  DLEKVLIRIYYKKCSRPELLAALQILQDIASQYLSAKTPEQSGFSSILLSEAVSNVPKIY 679

Query: 790  ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
            E+  S            L  I +      D + +                 D +     +
Sbjct: 680  EDVNS-----------FLEKINAKAAKDDDKYGFFREEFEAE---------DINDLKLSI 719

Query: 850  KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGF 907
              +E  L  H K+    LG T + YVT+    YL+EV         VP  ++  S+ K  
Sbjct: 720  ASVEDDLNTHRKDAAAKLGKTKVDYVTVAGIEYLIEVKRKSVEEKKVPASWQQISATKTT 779

Query: 908  FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
             R+ TP +K++L E  Q +    +A  +  +RL+      +   R  V++ A LDAL+SL
Sbjct: 780  LRFHTPEVKRMLQERDQYKESLAAACDTAFKRLLDDIAAKYQSLRDCVSSLATLDALLSL 839

Query: 968  AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
            A  ++  +    +P  +++   E   +  +   HP++  + L    +VPND+ + G    
Sbjct: 840  ATLAN--QPGYVKPTFVETT--ELDIVGGR---HPMV--EQLLLDAYVPNDVHLSGDATR 890

Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
            + +L+TGPNMGGKS+ +R   L  I+ Q+G+ VPAE  ++  +D +F RMGA D+++ G+
Sbjct: 891  A-LLVTGPNMGGKSSYVRSAALIAIMGQIGSYVPAESAKLGMLDAVFTRMGALDNMLKGE 949

Query: 1088 STFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFST 1147
            STF+ EL+ETA +L SAT  SL++LDELGRGTST DG AIAE+VL++ +  V    LF T
Sbjct: 950  STFMVELNETADILRSATSRSLIILDELGRGTSTFDGVAIAEAVLDYVIRDVGALTLFIT 1009

Query: 1148 HYHRLA-VDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGI 1206
            HY  LA +  + +  +   HM+ +  +   G +EV FLY ++ G   +SYG+NVARLA +
Sbjct: 1010 HYQHLARLQDRFNGELKNVHMSFEERD---GGKEVVFLYEVAEGTSHRSYGLNVARLAKV 1066

Query: 1207 PDKVLQKAVAKSTEFEAIYG 1226
            P+KV++ A  KS+E E   G
Sbjct: 1067 PEKVIETAEVKSSELEESMG 1086


>sp|P13705|MSH3_MOUSE DNA mismatch repair protein Msh3 OS=Mus musculus GN=Msh3 PE=2 SV=3
          Length = 1091

 Score =  320 bits (821), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 269/932 (28%), Positives = 439/932 (47%), Gaps = 96/932 (10%)

Query: 333  QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
            Q+ + K +H D V+  + G  Y  F  DA + A+EL++  ++         P     ++V
Sbjct: 193  QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252

Query: 392  EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
             +L  KGY+V VV+QTET     +      +K  V  R++ A+ TK TL  GE +     
Sbjct: 253  RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307

Query: 447  ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
               S N D        +YL+ + E  ++   +   +   G+  V  AT  ++     D  
Sbjct: 308  LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367

Query: 496  DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
                L   +S L+PVE++ P+++  P TE  I R T   + +D + +        T  E 
Sbjct: 368  SRLELETRISSLQPVELLLPSDLSEP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423

Query: 556  KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
             + +  +T           A    +  G   L G++       +    V+ AL   + YL
Sbjct: 424  SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468

Query: 616  KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
            K+  L++ L +   F+ L  SG        +M ++   L NLE+ +N     + G+L   
Sbjct: 469  KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEMVQNQTDMKTKGSLLWV 521

Query: 676  LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
            L+H  T+FG+R L+ W+ +PL     I  R DAV+ +         +    L +LPD+ER
Sbjct: 522  LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581

Query: 736  LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
             L  ++                    K   QEF   +   C+L  +  + + A+  + +S
Sbjct: 582  GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623

Query: 795  RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
              L  ++        ++S ++H+    +   A    +      +  D+    K+   ++E
Sbjct: 624  DLLRALIV------ELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 676

Query: 852  IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
            +  S+   L+E RK+L   S+ YVT+    +++E+  S    +P D+    S K   R+ 
Sbjct: 677  VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 736

Query: 912  TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
             P I +    L+Q   +      +     +  F EH++   + V   A +D + SLA  +
Sbjct: 737  PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIFSLAKVA 796

Query: 972  DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
               +G  CRP +      EE  I  K+  HP++      + +FVPN  ++    +   ++
Sbjct: 797  K--QGNYCRPTL-----QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLSD--SERVMI 847

Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
            +TGPNMGGKS+ ++QV L  I+AQ+G+ VPAE   I  VD IF RMGA D+I  G+STF+
Sbjct: 848  ITGPNMGGKSSYIKQVTLVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFM 907

Query: 1092 TELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHR 1151
             +L++TA ++  A+  SLV+LDELGRGTST DG AIA + LE+F+  V+   LF THY  
Sbjct: 908  EQLTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPP 967

Query: 1152 LAVDYKKDP-RVSLCHMACQVG-----NGVGGVEE----VTFLYRLSPGACPKSYGVNVA 1201
            +    K  P +V   HM   V         G +E+    VTFLY+++ G   +SYG+NVA
Sbjct: 968  VCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVA 1027

Query: 1202 RLAGIPDKVLQKAVAKSTEFEAIYGKHKKESE 1233
            +LA +P +VLQKA  KS E E +    +K  E
Sbjct: 1028 KLADVPREVLQKAAHKSKELEGLVSLRRKRLE 1059


>sp|Q8RA71|MUTS_THETN DNA mismatch repair protein MutS OS=Thermoanaerobacter tengcongensis
            (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
            GN=mutS PE=3 SV=1
          Length = 869

 Score =  317 bits (811), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 272/903 (30%), Positives = 427/903 (47%), Gaps = 139/903 (15%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
            +Q+ + K K+ D ++FF++G FYE+F  DA + AKEL++         +   P  G P  
Sbjct: 11   EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 70

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 ++KL +KGY+V + EQ E P       K KG    +VKR++  + T GT+   E 
Sbjct: 71   AADFYIDKLVKKGYKVAICEQLEDPS------KAKG----LVKRDVVRIYTPGTIINPES 120

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            +    + +YL+++     +         +GIC VDV T  +   ++ +  +   +   ++
Sbjct: 121  MDEKSN-NYLVSVYREKDN---------YGICAVDVTTGELYATEIKNCKNGKRIYDEIA 170

Query: 506  ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
            +  P EII     L       + ++  N  VN   PL+  ++A + ++E           
Sbjct: 171  KYSPSEIISNEEFLKNNKYIKVFKNN-NCAVNAYKPLN--YEASSELIE----------- 216

Query: 566  SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
               + D  V   + E                       V+ +LG  L YLK+  L +T L
Sbjct: 217  --KQFDKKVEELELEDKKF-------------------VIHSLGALLSYLKE--LQKTSL 253

Query: 626  RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
            +     +   + + D     YM LD+ A+ NLE+ E++R+    G+L   L+  VT  G 
Sbjct: 254  K----HINKLTLYQD---NSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGG 306

Query: 686  RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
            RLL+ WL  PL +   I +R DAV  L   N    +E ++ L+++ D+ERL ++      
Sbjct: 307  RLLKKWLEEPLIDKDEIEKRLDAVEELFN-NYRERIELKELLNKVYDLERLASK------ 359

Query: 746  ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
                     ++Y+    K   +FIS     +L  Q    +  IL    SR L  I     
Sbjct: 360  ---------IVYQSVTPK---DFIS----IKLSLQNLPKIKNILSKFSSRLLKEIYEKLD 403

Query: 806  GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDM--DYDSACKKVKEIEASLTKHLKE 862
             L  +  ++ K  KD  D       G II  G  +M      A  + K   A+L    +E
Sbjct: 404  VLQDVYELIDKSIKD--DPSNQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEADERE 461

Query: 863  QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
            +      T I  + IG +    Y +EV +S    VP  Y  + +     RY TP +K++ 
Sbjct: 462  K------TGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEIE 515

Query: 920  GELSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
              +  AE    E E  L   I +++  Q     N  + +    A +D LIS A  ++   
Sbjct: 516  ETILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYI----AIIDVLISFAEVAE--T 569

Query: 976  GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
                +P++     + E  I  K   HPV+  +++    FV NDI IG       +++TGP
Sbjct: 570  NKYVKPIV-----DYEDRIVIKEGRHPVV--ETISDEGFVANDIDIGPEN--PIMIITGP 620

Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
            NM GKST +RQV L V++AQVG  VPA    I  VD+IF R+GA D I AGQSTF+ E+S
Sbjct: 621  NMAGKSTYMRQVALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMS 680

Query: 1096 ETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVD 1155
            E A +L SAT  SL++LDE+GRGTST DG +IA++V+E+   K++ + LF+THYH L   
Sbjct: 681  EVANILHSATSKSLIILDEVGRGTSTYDGMSIAQAVIEYIHEKIKAKTLFATHYHELT-- 738

Query: 1156 YKKDPRVSLCHMACQVGNGVGGVEE----VTFLYRLSPGACPKSYGVNVARLAGIPDKVL 1211
                    L      V N    VEE    + FL+++ PG   +SYG+ V++LAG+P  ++
Sbjct: 739  -------KLEGKLRGVRNFNVSVEEREDDIIFLHKIVPGGSDRSYGIQVSKLAGLPYSII 791

Query: 1212 QKA 1214
            ++A
Sbjct: 792  ERA 794


>sp|A4J5Q6|MUTS_DESRM DNA mismatch repair protein MutS OS=Desulfotomaculum reducens (strain
            MI-1) GN=mutS PE=3 SV=1
          Length = 868

 Score =  316 bits (810), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 286/931 (30%), Positives = 437/931 (46%), Gaps = 145/931 (15%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---QPHC 380
            L+   +Q+ + K +H + ++FF++G FYE+F  DA + ++EL++       GE    P C
Sbjct: 3    LTPMMQQYLDIKKQHPNTILFFRLGDFYEMFFEDAKLASQELEITLTGRDAGEPERVPMC 62

Query: 381  GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
            G P       + KL  KGY+V + EQ E P      +  KG    +VKRE+  V+T GTL
Sbjct: 63   GVPFHAADSYISKLIEKGYKVAICEQVEDP------KVTKG----IVKREVIRVITPGTL 112

Query: 441  TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
             +G +LS   D +YL+A++++       S++ C G+ V D++T    + ++        L
Sbjct: 113  MDGSMLS-EKDNNYLVAISQT-------SSNNC-GMAVADLSTGLFQVTEMEGHWSLESL 163

Query: 501  CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
               +  L P E+     +L+P+ ++    H +     + +P + F    TT+ E + + +
Sbjct: 164  LDEILRLTPREV-----LLTPDLKK----HEKTVQAFNFLPSTVF----TTLEETQQVSD 210

Query: 561  RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
             I  E LN       ++  +     C+                   A G  L YL  +  
Sbjct: 211  YI--ELLNNQFGQKVSAVYKDRPAVCM-------------------AAGILLQYLINT-- 247

Query: 621  DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
                    K +L   +     + + YM+LD  A  NLE+ ++ R GD  GTL   L+   
Sbjct: 248  -------QKRQLNHITEITAYSPRAYMMLDGIARRNLEISKSLRDGDKRGTLLWVLDATK 300

Query: 681  TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLAR 739
            TA G R+L+ WL +PL ++  I+ER DAV  L  VN     E    AL ++ D+ERL AR
Sbjct: 301  TAMGGRMLKNWLEQPLIDTLKIQERLDAVEEL--VNSILLREEISGALKQIYDLERLAAR 358

Query: 740  LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTESRQLH 798
              A   ANGR+                  + AL G  E +     +L A+     S +L 
Sbjct: 359  A-AYGSANGRD------------------MIALRGSLEKLPFIHDALAAV----SSTRLK 395

Query: 799  HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-----DMDYD---SACKKVK 850
             I T         + L   +   D   A N    +  GG+     D + D   +A +  K
Sbjct: 396  RIYTE-------FNTLSDLRKVLDLALAENPPVSLRDGGLIKDGFDQEVDQLRNAARDGK 448

Query: 851  EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
               A L    KE      +T I  + +G +    Y LEV  +    VP  Y+ R +    
Sbjct: 449  TWLAGLEAREKE------NTGIKNLKVGFNKVFGYYLEVTRANLSMVPEYYQRRQTLANA 502

Query: 908  FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
             R+ TP +K+    +  AE        ++   +  +     +  ++  A  +E+DAL+SL
Sbjct: 503  ERFITPELKEYESMILGAEDRLVELEYNLFVAIRAKVAAEVSSIQKTAALLSEIDALVSL 562

Query: 968  AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
            A  +        RP + D+       I  K   HPV+  ++ G G FVPND T       
Sbjct: 563  AEVA--VRNGFVRPEVTDNG-----IIEIKDGRHPVV-ENTQGLGGFVPND-TYLDIKEE 613

Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
               L+TGPNMGGKST  RQV L V++AQVG+ VPA+   I  VDRIF R+GA D + +GQ
Sbjct: 614  RLCLITGPNMGGKSTYQRQVALIVLMAQVGSFVPAQRARIGIVDRIFARVGASDDLTSGQ 673

Query: 1088 STFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFST 1147
            STF+ E+ ET  ++  AT  SLV++DELGRGTS  +G AIA+SV+E    +V CR LFST
Sbjct: 674  STFMVEMYETKQIIDHATAKSLVIIDELGRGTSNLEGMAIAQSVIEFLHDEVGCRTLFST 733

Query: 1148 HYHRLAVDYKKDPRVSLCHMACQVGNGVGGV----EEVTFLYRLSPGACPKSYGVNVARL 1203
            HYH LA          L  +   + N    V    +EV FL ++      KSYGV+ ARL
Sbjct: 734  HYHELA---------ELEGLLRGLKNYATAVKEQGDEVVFLRKVVRSKASKSYGVHCARL 784

Query: 1204 AGIPDKVLQKAVAKSTEFEAIYGKHKKESEE 1234
            AG+P  ++++A     + E     H++ ++E
Sbjct: 785  AGLPTSIIRRASELVMQLEF----HQRAAQE 811


>sp|A6RPB6|MSH3_BOTFB DNA mismatch repair protein msh3 OS=Botryotinia fuckeliana (strain
            B05.10) GN=msh3 PE=3 SV=2
          Length = 1133

 Score =  313 bits (801), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 275/958 (28%), Positives = 423/958 (44%), Gaps = 132/958 (13%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQP--- 378
            L+  + Q  + K KHMD ++  ++G  ++ F  DA   AK L +  + G     E P   
Sbjct: 210  LTPMELQVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSES 269

Query: 379  HCGF------PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
            H  +      P     ++ ++L   GY++ +V QTET       +K   +++    R++ 
Sbjct: 270  HLNYFASASIPVHRLPVHAKRLVAAGYKIGIVRQTETAAL----KKAGDNRNAPFVRKLT 325

Query: 433  AVVTKGTL--------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
             V TKGT         T        P   YL+ +TE+             GI  V  AT 
Sbjct: 326  NVYTKGTYIDDIDGLDTTDAPSGGAPATGYLLCITETKAKGWGTDEKVEVGILAVQPATG 385

Query: 485  RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
             +I     D      L   L  + P E++     L+  T++ +  L  +   +  D + +
Sbjct: 386  DVIYDNFEDGFMRGELETRLLHIAPCELL-IVGELTKATDKLVQHLSGSSTNVFGDRIRV 444

Query: 543  SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
                 ++T   E    Y+R+     +K  ++ +++ A    L      L +++   +  +
Sbjct: 445  ERVGKSKTMAAES---YSRVAQFYADKLKAHQSSNNAREQEL------LEKVLKLTEPVT 495

Query: 603  QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
              LSA+   + ++ +  L E +    K+       F   + + +M+L+   L +LE++ N
Sbjct: 496  ICLSAM---ITHMTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTSLEIYTN 544

Query: 663  SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFAL 721
                   G+L+  L+   T FG+RLLR W+ RPL +   + ER  AV  L+   N P   
Sbjct: 545  QTDYTQKGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKVD 604

Query: 722  EFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
            +    L  +  D+ER L R++               Y    + +L   +  +        
Sbjct: 605  KLNATLREVRSDLERSLLRIY---------------YGKCTRPELLTVLQTMQRI----- 644

Query: 781  ACSSLGAILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEAN 827
                         + +  H+ TP                LPAI  I+  F D  +   A 
Sbjct: 645  -------------ANEFAHVKTPSDAGFESIALNEAVASLPAIGEIVISFLDKINAQAAR 691

Query: 828  NSGR---IIPHGGVDMDYDSACKKVKEIEASLTKH-LKEQRKLLGDTSITYVTIGKDLYL 883
            N  +    + H   +   D  C  +  +E  L  H +    KL   T +TYVTI    YL
Sbjct: 692  NDDKYAFFLEHYETEAIGDHKCG-IGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYL 750

Query: 884  LEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
            +EVP +   +VP  +   S  K   R+ TP + K L E  Q +    SA  +     + +
Sbjct: 751  IEVPNTDLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSE 810

Query: 944  FCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPV 1003
               H+   R  ++  A LD L+SLA  +       C+P    S       IS     HP+
Sbjct: 811  ISTHYALIRDTISHLATLDCLLSLATVASL--PGYCKPTFTSSTE-----ISVIGGRHPM 863

Query: 1004 LRSDSLGKGEFVPNDITIGG---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADV 1060
            +  + L    ++PND ++     H  A  +LLTGPNMGGKS+ +RQV L  ILAQ+G+ V
Sbjct: 864  V--EQLLPSAYIPNDTSLSTSPDHTRA--LLLTGPNMGGKSSYVRQVALISILAQIGSYV 919

Query: 1061 PAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTS 1120
            PAE   +  +D I+ RMGA D +   QSTF+ ELSETA +L SA   SLV+LDELGRGTS
Sbjct: 920  PAESARLGLLDGIYTRMGAYDSLFTAQSTFMVELSETASILKSAGPRSLVILDELGRGTS 979

Query: 1121 TSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAV---DYKKDPRVSLCHM---ACQVGNG 1174
            T DG AIAE+VL+  V + +C  LF THY  LA     ++K   +   HM   A + G  
Sbjct: 980  THDGVAIAEAVLDWVVRETKCLCLFITHYQTLASVARGFEKGKELRNVHMKFTAERNGRR 1039

Query: 1175 VGGV----------EEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKSTEFE 1222
            V             EE+TFLY +  G   +SYG+NVARLA +P  VL  A +KS E E
Sbjct: 1040 VSNADADKDNEDFDEEITFLYEVGEGVAHRSYGLNVARLARVPKSVLDTAASKSRELE 1097


>sp|Q4P6I8|MSH3_USTMA DNA mismatch repair protein MSH3 OS=Ustilago maydis (strain 521 /
            FGSC 9021) GN=MSH3 PE=3 SV=1
          Length = 1154

 Score =  311 bits (797), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 269/941 (28%), Positives = 444/941 (47%), Gaps = 94/941 (9%)

Query: 331  QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
            +KQ  E K++H   ++  ++G   + +  DA + +KEL +         C FPERN    
Sbjct: 238  EKQILELKAEHPGVLLIIEVGYKLKFYGEDARIASKELSIM--------C-FPERNLLTA 288

Query: 388  -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT- 439
                    ++V++L + G++V VV Q ET     L+   K +    V R++ A+ T  T 
Sbjct: 289  MIPVHRLHIHVKRLIQAGHKVGVVRQIETRA---LKAASKNAYTPFV-RKLTALYTASTW 344

Query: 440  ---LTEGELLSANPDASY------LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
               L+  + L+AN   +Y      LMA+ E ++   +Q+     GI  V+V T  +   Q
Sbjct: 345  VDDLSSLDDLAANMGDAYTNQPKSLMAIVEQSERGNAQADRVSIGIVSVEVNTGHLTYDQ 404

Query: 491  VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL-----VNDLVPLSEF 545
              D    S L   ++ L P E++ P  +  P TE+ I     N       +  L  + ++
Sbjct: 405  FSDGHARSELETRIAHLAPAEVLIPPQLTKP-TEKVISYLLGNGADGGVRIERLAAMPDY 463

Query: 546  WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
              A  +V      Y     ES    +       +E D       + + L    D  S  L
Sbjct: 464  NQAFQSV---TRFYRDRGLESPEVPEVPEVPGSSEADTTR----LATTLADGADKRSSPL 516

Query: 606  SALGGTLFYLKKSFLDETLLRFAKFEL----LPCSGFGDMAKKPYMVLDAPALENLEVFE 661
             +L  +L  L    L + +     F+L       + F   + +  M+L++  L NLE+F 
Sbjct: 517  ISLIVSLPQLSLIALAQIIQHLQAFQLESICTLSTNFRSFSSRTTMLLNSNTLANLEIFR 576

Query: 662  NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
             +      G+L   L+ C +A G+RLLR W++RPL +   ++ER DAV  LR        
Sbjct: 577  TANEQTERGSLIWLLDKCKSAMGRRLLRKWVSRPLTDIDKLQERLDAVEALRDGKSYVLR 636

Query: 722  EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQA 781
                 L  LPD+ER LAR+       GR +               E  + L     + Q 
Sbjct: 637  RLDSVLHGLPDLERGLARM-----TYGRATPT-------------ELATVLLSLNRVTQE 678

Query: 782  CSSLGAILENTESRQLH-HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
              +  A    T+S  +  H+L+   G   + + L     +     ANN   +     +D 
Sbjct: 679  FKADEAATWKTQSSLIDTHLLSLASGKQVVQTYLNQI--SIKEARANNKADLY----LDA 732

Query: 841  DYDSACKKVKE----IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPR 896
            D   A +  K+    I+  L +HL+E RKLL   S+ YV++    YL+EV  +    VP 
Sbjct: 733  DVFPAIQASKDNMAIIDGELREHLREIRKLLHRPSLDYVSVAGVDYLVEVRVADAKKVPV 792

Query: 897  DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE-HHNKWRQMV 955
            ++   S+ K   R+ TP + +L     Q +   ++A +    R + + C+  +   R +V
Sbjct: 793  EWLRVSATKSMVRFHTPEVMRLSKIRDQHKETLDAAAQEAFARFVRELCKSEYVVLRNVV 852

Query: 956  AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLG--HPVLRSDSLGKGE 1013
            A+ A LD L+SLA  +        RPV L    + E  +  + +G  H +L  + +    
Sbjct: 853  ASLAVLDVLLSLAHVAR--AAGYTRPVFLRQPQDAEASVPVEIIGMRHAIL--EVVSAMP 908

Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
            ++PND+++    + + ILL+G NMGGKS+++R + L +I+AQ+G+ V A++  I   D +
Sbjct: 909  YIPNDVSLSTGDSGAAILLSGCNMGGKSSVVRALGLVIIMAQIGSFVAADVARIGVHDAV 968

Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLE 1133
            +VRMGA+D + +G+ST++ E+SETA +L S T  S+V+LDELGRGTS+ DG  +A  VLE
Sbjct: 969  YVRMGARDRMFSGRSTYMVEVSETADILGSLTSRSMVILDELGRGTSSRDGYCLAAGVLE 1028

Query: 1134 HFVHKVQC--RGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGA 1191
            + +  + C    +F THY +LA   ++ P +   HMA    N    ++ +  +Y+L PG 
Sbjct: 1029 YLL-TLGCPPNTVFITHYLQLASMQRRYPHLRNMHMAF-TSNSRNLLDPIHLVYKLRPGI 1086

Query: 1192 CPKSYGVNVARLAGIPDKVLQKAVAKSTEFEAIYGKHKKES 1232
               S+G++ A LA +P +++  A   ST   A+Y KH   S
Sbjct: 1087 A-HSFGIHAAHLARLPLQIIHSA---STISSALYAKHTNRS 1123


>sp|Q46CE2|MUTS_METBF DNA mismatch repair protein MutS OS=Methanosarcina barkeri (strain
            Fusaro / DSM 804) GN=mutS PE=3 SV=1
          Length = 900

 Score =  309 bits (791), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 281/909 (30%), Positives = 431/909 (47%), Gaps = 132/909 (14%)

Query: 333  QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGFPER 385
            Q++E K  + D +IFF+MG FYE F  DA   AKEL++          GE+ P  G P  
Sbjct: 11   QYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDKSGERMPLAGIPYH 70

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + +L  KGY+V + EQ E P      +K KG    +VKR +  VVT GT  +  +
Sbjct: 71   AIDTYLPRLINKGYKVAICEQLEDP------KKAKG----IVKRGVVRVVTPGTAIDSSM 120

Query: 446  LSANPDAS--YLMALTESNQSPASQSTDRCF--GICVVDVATSRIILGQVMDDLDCSVLC 501
             S   DAS  YLMA+         ++ +  F  G+  +D++T   +  Q  D  +   L 
Sbjct: 121  FS---DASNNYLMAVAGREIGKPGKNAENEFEIGVSFLDISTGEFLTTQFRDSENFEKLL 177

Query: 502  CLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
              L+ +RP E I P+++              NP       L+E   A+T V E       
Sbjct: 178  SELARMRPSECILPSSLYE------------NP------ALAERLRAQTIVQEFA----- 214

Query: 562  ITAESLNKADSNVANSQAEGDGL------TCLPGILSELISTGDSGSQVLSALGGTLFYL 615
                       +++ ++  G+ L        L G+  E +        V SA        
Sbjct: 215  ----------PDISGAKEAGERLKNHFRVATLEGMGCENLDFA-----VYSAWAAL---- 255

Query: 616  KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
               +   T +R    EL   +     +   +M+LD+  L NLE+ +N R      +LY  
Sbjct: 256  --EYAQTTQMR----ELTHINTLRTYSNSEFMILDSVTLRNLEIVKNVRDEGDENSLYRI 309

Query: 676  LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDME 734
            LNH  T  G R L+ WL +PL +   I  R DAV  L    +P    + R  LS + D+E
Sbjct: 310  LNHTKTPMGSRALKKWLLKPLLSVEKINYRLDAVEELTA--KPLLRYDLRNWLSDVRDIE 367

Query: 735  RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
            RL+ R+         NSN             ++ ++     E +     SL   LEN ES
Sbjct: 368  RLVGRVVYG------NSNA------------RDLVALKKSLEALPPVRDSL---LENIES 406

Query: 795  RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIE 853
              L+ I     GL A  S L++  +  D    +     +  GG +   Y++   ++K+I 
Sbjct: 407  TILNDIAV---GL-ASFSELENLAEMIDRAIVDEPPISVREGGMIKSGYNAELDELKDIA 462

Query: 854  ASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
            ++  + +   Q+K    + I  + +G +    Y +EV  +    VP DY  + +     R
Sbjct: 463  SNSRQWIANFQQKERERSGIKSLKVGYNKIFGYYIEVTNANSSQVPEDYIRKQTMANAER 522

Query: 910  YWTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
            ++TP +K+    +  A +EK  AL+  I   ++     H  + ++       LD L  LA
Sbjct: 523  FFTPELKEKESLILTA-NEKAIALEYEIFTEILQTLSAHSRELQETAERIGTLDVLTDLA 581

Query: 969  IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
              ++       RP + D C      I  +   HPV+  ++   G FVPND  +    N  
Sbjct: 582  EVAE--NNNYIRPQLTDDCK-----ILIRDGRHPVV--ENTVHGGFVPNDTEMDCKEN-Q 631

Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
            F+L+TGPNM GKST +RQ  L  I+AQVG+ VPA    I  +D++F R+GA D + +GQS
Sbjct: 632  FLLVTGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDDLASGQS 691

Query: 1089 TFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVH---KVQCRGLF 1145
            TF+ E+ E A +L++A+  SLV+LDE+GRGTST DG +IA++V+E F+H   KV  R LF
Sbjct: 692  TFMVEMVELANILNNASPRSLVLLDEIGRGTSTYDGYSIAKAVVE-FLHNRGKVGVRALF 750

Query: 1146 STHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAG 1205
            +THYH+L    +K  RV   H+A +         E+ FL ++ PGA  +SYG+ VARLAG
Sbjct: 751  ATHYHQLTALEEKLKRVKNYHVAVKEEG-----HELVFLRKIVPGATDRSYGIQVARLAG 805

Query: 1206 IPDKVLQKA 1214
            +P+KV+++A
Sbjct: 806  VPEKVIERA 814


>sp|Q67NK1|MUTS_SYMTH DNA mismatch repair protein MutS OS=Symbiobacterium thermophilum
            (strain T / IAM 14863) GN=mutS PE=3 SV=1
          Length = 875

 Score =  309 bits (791), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 283/923 (30%), Positives = 415/923 (44%), Gaps = 137/923 (14%)

Query: 333  QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-------KGEQPHCGFPER 385
            Q+ + K ++ D ++F+++G FYE F  DA + A+EL+L           G  P  G P  
Sbjct: 12   QYLQIKEQYPDCILFYRLGDFYETFMDDAELVARELELVLTGRDAGKDMGRVPMAGIPYH 71

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + +L  KGY+V + +Q E P      +K KG    +VKR++  VVT GTL E  L
Sbjct: 72   AAEAYIARLIEKGYKVAICDQLEDP------KKAKG----LVKRDVTRVVTPGTLVEPRL 121

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    + ++L A+  S            FG+ VVD++T      Q+       +L   + 
Sbjct: 122  LPEKAN-NFLAAIAWSRTG---------FGLAVVDLSTGEFAAAQMNGADSLRLLLEEIG 171

Query: 506  ELRPVEII-KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
             L P E+I +P     P            PL    + +S F   E       N Y ++T 
Sbjct: 172  RLEPREVILEPGLAAEPSVT--------GPLKASGIAVSVF---EGRHFNHANAYRKLT- 219

Query: 565  ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
                           E  G   L G   E +            L  +      ++L+E  
Sbjct: 220  ---------------EHFGTANLSGFGCEDLE-----------LATSAAGAALAYLEE-- 251

Query: 625  LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
                K  L   SG        YMVLD     NLE+  + R G   GTL   ++  VTA G
Sbjct: 252  --MHKASLGHVSGLAVYYPGDYMVLDPATRRNLELTRSLRDGGRRGTLLWVMDRTVTAMG 309

Query: 685  KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFAS 743
             RLL++WL RPL +   I  R +AV  L  V++P    + R  L  + D+ERL  R+ A 
Sbjct: 310  ARLLKSWLERPLLDLRQIHARHEAVGEL--VHRPVLRADLRALLQEVHDLERLAGRV-AV 366

Query: 744  SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
              AN R+         A K+ L               A  S+   LE+  + +L  +   
Sbjct: 367  GSANARDLV-------ALKQSLV--------------ALPSIRVALEDVRAERLVELRDQ 405

Query: 804  GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-----YDSACKKVKEIEASLTK 858
                   + +L   +D  +   A+     +  GG+  D      D   +  ++ +A + +
Sbjct: 406  -------LDMLDDVRDLIEHAIADEPPVALTEGGILKDGFHPEVDELRRIARDGKAWIAQ 458

Query: 859  HLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
                +R+    T I  + IG +    Y L V +     VP DY  + +     R+ TP +
Sbjct: 459  VEARERE---RTGIKSLKIGYNKVFGYYLAVTKPNLPLVPPDYIRKQTLANEERFITPEL 515

Query: 916  KKLLGELSQAESEKESALK-----SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
            K+L  ++  A +E+   L+      I QR+  +        R    A AELDAL S A  
Sbjct: 516  KELEEKVLHA-AERVMDLEYELFVEIRQRVAAEVTRIQRSAR----AVAELDALASFAEV 570

Query: 971  SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
            +  Y    CRP++  S       +  K   HPVL    + +G FVPND+ +   G    +
Sbjct: 571  ASLY--GYCRPLVDGST-----VLELKGSRHPVLER-VMEEGAFVPNDLLVDT-GENRVL 621

Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
            L+TGPNMGGKST++RQ  LAVILAQ G+ VPAE   I  VDR+F R+GA D +  G+STF
Sbjct: 622  LITGPNMGGKSTVMRQAALAVILAQAGSFVPAESAHIGLVDRVFTRVGASDDLATGRSTF 681

Query: 1091 LTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYH 1150
            + E++E A +L SAT  SLVVLDE+GRGT+T DG +IA ++ EH    + CR LF+THYH
Sbjct: 682  MVEMTEVANILHSATERSLVVLDEVGRGTATFDGLSIAWAITEHIHQAIGCRTLFATHYH 741

Query: 1151 RLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKV 1210
             L       P V    +A          E++ FL +L  G   +SYG+ V RLAG+P  V
Sbjct: 742  ELCELEGILPGVKNYSVAVMEKG-----EDIIFLRKLVRGGADRSYGIQVGRLAGLPASV 796

Query: 1211 LQKAVAKSTEFEAIYGKHKKESE 1233
            +++A       E   G+ K   E
Sbjct: 797  VERAREILATLEEQEGERKSRRE 819


>sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3 PE=1
            SV=2
          Length = 1081

 Score =  306 bits (785), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 268/975 (27%), Positives = 443/975 (45%), Gaps = 108/975 (11%)

Query: 325  RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFP 383
            R  +  ++Q  E KSK+ D V+  ++G  Y  F  DA + A+ L +  +M         P
Sbjct: 102  RKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVP 161

Query: 384  ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
                + +V +L   GY++ VV+QTET       +    ++     R + A+ TK TL   
Sbjct: 162  TFRLNFHVRRLVNAGYKIGVVKQTETAAI----KSHGANRTGPFFRGLSALYTKATLEAA 217

Query: 444  ELLSAN--------PDASYLMAL------TESNQSPASQSTDRCFGICVVDVATSRIILG 489
            E +S            +++L+ +      +E+       S D   G+  V+++T  ++  
Sbjct: 218  EDISGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYE 277

Query: 490  QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF--WD 547
            +  D+   S L  ++  L P E++     LS +TE+ ++ H   P  N  V  +    + 
Sbjct: 278  EFNDNFMRSGLEAVILSLSPAELLL-GQPLSQQTEKFLVAHA-GPTSNVRVERASLDCFS 335

Query: 548  AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
                V E+ ++  +I+A +L   D      +A   G++CL      + +  +     + A
Sbjct: 336  NGNAVDEVISLCEKISAGNLE--DDKEMKLEAAEKGMSCL-----TVHTIMNMPHLTVQA 388

Query: 608  LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
            L  T  +LK+   +  L + A F          ++    M L A  L+ LEV +N+  G 
Sbjct: 389  LALTFCHLKQFGFERILYQGASFR--------SLSSNTEMTLSANTLQQLEVVKNNSDGS 440

Query: 668  SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------------- 712
             SG+L+  +NH +T +G RLLR W+  PL +  LI  R DAV+ +               
Sbjct: 441  ESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSE 500

Query: 713  -------RGVNQP-FALEFRK---ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
                   R +  P F L       A+SR  D++R + R+F  +                 
Sbjct: 501  LVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRT----------------- 543

Query: 762  KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH---FK 818
              +  EFI+ +    L  +    LG I +++E R +         L  ++S++       
Sbjct: 544  -AKATEFIAVMEAILLAGKQIQRLG-IKQDSEMRSMQSATVRSTLLRKLISVISSPVVVD 601

Query: 819  DAFDWVEANNSGRIIPHGGVDMDYDS---------ACKKVKEIEASLTKHLKEQRKLLGD 869
            +A   + A N    +    +D+   S         A + V  I   L   +   RK L  
Sbjct: 602  NAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAI 661

Query: 870  TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
             ++ ++ +    +L+E+P  +   VP ++   +S K   RY  P I   L EL+ A    
Sbjct: 662  RNLEFLQVSGITHLIELP--VDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHL 719

Query: 930  ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
                ++     +  F  ++  ++  V A A LD L SL+  S        RP  +D C  
Sbjct: 720  AIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSR--NKNYVRPEFVDDCEP 777

Query: 990  EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCL 1049
             E  I+ +S  HPVL  +++ +  FVPND  +   G    I+ TGPNMGGKS  +RQV L
Sbjct: 778  VE--INIQSGRHPVL--ETILQDNFVPNDTILHAEGEYCQII-TGPNMGGKSCYIRQVAL 832

Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSL 1109
              I+AQVG+ VPA   ++  +D +F RMGA D I  G+STFL ELSE + ++ + +  SL
Sbjct: 833  ISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSL 892

Query: 1110 VVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDYKKDP----RVSLC 1165
            V+LDELGRGTST DG AIA + L+H + + +C  LF THY  +A      P       + 
Sbjct: 893  VILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVS 952

Query: 1166 HMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKSTEFEAIY 1225
            ++  Q   G    ++VT+LY+L  G C +S+G  VA+LA IP   +++A++ + + EA  
Sbjct: 953  YLTLQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEV 1012

Query: 1226 GKHKKESEENLPADH 1240
               ++ +    P  H
Sbjct: 1013 RARERNTRMGEPEGH 1027


>sp|B9LB04|MUTS_CHLSY DNA mismatch repair protein MutS OS=Chloroflexus aurantiacus (strain
            ATCC 29364 / DSM 637 / Y-400-fl) GN=mutS PE=3 SV=1
          Length = 966

 Score =  306 bits (784), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 280/955 (29%), Positives = 429/955 (44%), Gaps = 135/955 (14%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------------- 376
            +Q+ + K +  D ++ F+ G FYE F+ DA + A+ LD+   + E               
Sbjct: 11   RQYRKLKEEAADAILLFRFGDFYETFDDDAKLIAELLDITLTRKEYAVDKRLPKDQQKLY 70

Query: 377  QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG----------SKDKV 426
             P  G P       V +L  +GYRV + EQ    E +    + +           S  K+
Sbjct: 71   APMAGMPYHAVDRYVSELIARGYRVAIAEQLSETEAMRNDTRPRSVYAAGLTPVESSGKM 130

Query: 427  VKREICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATS 484
            V+R I  V+T GT+ +  +L   PD +  YL A+                G+   D++T 
Sbjct: 131  VQRAIVRVITPGTVIDPAML---PDRTNNYLAAVIVEQGK---------VGLAYADLSTG 178

Query: 485  RIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN--MLSPETERAILRHTRNPLVNDLVPL 542
                 +  D      L   L+ L P E++ P +  +  P  E    R     L  DL PL
Sbjct: 179  EFAAAEFTDARALMQLQAELARLSPAEVLVPDDEALRLPNLEPVQAR-----LSQDLAPL 233

Query: 543  SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ-------AEGDGLTCLPGILSELI 595
            ++  +    +L  + +  R+   S                   A    + C    L  L 
Sbjct: 234  TK--EEREALLPHERVARRLEGASAASWTQGYVTEWPLWRWELATTTEVLCEHLALPSLA 291

Query: 596  STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALE 655
              G  G  + +   G L    +    +   R ++   L     G      YM+LD     
Sbjct: 292  VCGLDGRPLATRAAGALLQYAQVTQRQ---RVSQLRALRVYHTG-----AYMLLDPQTRR 343

Query: 656  NLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV 715
            NLE+ E+     +  +L A L+   TA G RLLR W+ +PL     ++ RQ AVA L  V
Sbjct: 344  NLELLESGGRQGAKASLIAVLDRTCTAMGARLLRRWITQPLIVIEPLQVRQHAVARL--V 401

Query: 716  NQPFA-LEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG 774
             +  A LE R AL+ LPDMER L R+     A G           A  + + +  +AL  
Sbjct: 402  AETMARLEVRSALADLPDMERALNRI-----AQGITV--------ATPRDMTQLRAALRK 448

Query: 775  CELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV-----SILKHFKDAFD------- 822
               + QA  +L   L   E         PG+  P +V      +L   + A D       
Sbjct: 449  LPAVAQAVQALLPDLLAAE--------MPGE--PPLVFDVCADVLDLLERALDDDPPALL 498

Query: 823  ----WVEANNSG----RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
                ++ A   G    R +   G D   D+  +  +  +  + +   ++R+    T I  
Sbjct: 499  GSSNYLRAAEEGGERPRRVIRPGFDQRLDALIRASRHAQEFIDRLESKERE---RTGIRS 555

Query: 875  VTIGKDL---YLLEVPESLRGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
            + +G +    Y +E+  ++    +P  YE + +     RY T  +K   G LS A  +  
Sbjct: 556  LKVGYNQVFGYYIEISRAVDAKLIPAHYERKQTLVNAERYVTEELKYYEGLLSDARLKLV 615

Query: 931  SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
               + I QRL  +   H ++ R  +AA A +DA    A+A     G   +P +       
Sbjct: 616  DLERDIFQRLCDELQPHLDRLRATIAAVARIDA--LAALAEVAVRGRYVQPRL-----RT 668

Query: 991  EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
            +  +  K   HPV+   +L +  F+ NDI + G   A  +++TGPNM GKST LRQV L 
Sbjct: 669  DRVLRIKQGRHPVVER-TLSE-PFIGNDIDLDGE-QAQILIITGPNMAGKSTFLRQVALI 725

Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLV 1110
             ++AQ+G+ VPA+  EI  VDRIF R+GA+D I  GQSTF+ E++ETA +L  +T  SL+
Sbjct: 726  TLMAQIGSFVPADEAEIGLVDRIFTRIGAQDDIATGQSTFMVEMTETAALLMQSTPRSLI 785

Query: 1111 VLDELGRGTSTSDGQAIAESVLEHFVH---KVQCRGLFSTHYHRLAVDYKKDPRVSLCHM 1167
            +LDE+GRGTST DG AIA +V+E ++H   ++ CR LF+THYH L    ++ PRV   HM
Sbjct: 786  ILDEVGRGTSTYDGMAIARAVVE-YIHDHPRLGCRTLFATHYHELIALERELPRVRNYHM 844

Query: 1168 ACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKSTEFE 1222
            A    +G      V FL+ L PG   +SYG++VA LAGIP +V+++A A   + E
Sbjct: 845  AAVERDG-----RVVFLHELRPGGADRSYGIHVAELAGIPPEVIRRASALLADLE 894


>sp|A9WFZ9|MUTS_CHLAA DNA mismatch repair protein MutS OS=Chloroflexus aurantiacus (strain
            ATCC 29366 / DSM 635 / J-10-fl) GN=mutS PE=3 SV=1
          Length = 966

 Score =  306 bits (784), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 280/955 (29%), Positives = 429/955 (44%), Gaps = 135/955 (14%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------------- 376
            +Q+ + K +  D ++ F+ G FYE F+ DA + A+ LD+   + E               
Sbjct: 11   RQYRKLKEEAADAILLFRFGDFYETFDDDAKLIAELLDITLTRKEYAVDKRLPKDQQKLY 70

Query: 377  QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG----------SKDKV 426
             P  G P       V +L  +GYRV + EQ    E +    + +           S  K+
Sbjct: 71   APMAGMPYHAVDRYVSELIARGYRVAIAEQLSETEAMRNDTRPRSVYAAGLTPVESSGKM 130

Query: 427  VKREICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATS 484
            V+R I  V+T GT+ +  +L   PD +  YL A+                G+   D++T 
Sbjct: 131  VQRAIVRVITPGTVIDPAML---PDRTNNYLAAVIVEQGK---------VGLAYADLSTG 178

Query: 485  RIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN--MLSPETERAILRHTRNPLVNDLVPL 542
                 +  D      L   L+ L P E++ P +  +  P  E    R     L  DL PL
Sbjct: 179  EFAAAEFTDARALMQLQAELARLSPAEVLVPDDEALRLPNLEPVQAR-----LSQDLAPL 233

Query: 543  SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ-------AEGDGLTCLPGILSELI 595
            ++  +    +L  + +  R+   S                   A    + C    L  L 
Sbjct: 234  TK--EEREALLPHERVARRLEGASAASWTQGYVTEWPLWRWELATTTEVLCEHLALPSLA 291

Query: 596  STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALE 655
              G  G  + +   G L    +    +   R ++   L     G      YM+LD     
Sbjct: 292  VCGLDGRPLATRAAGALLQYAQVTQRQ---RVSQLRALRVYHTG-----AYMLLDPQTRR 343

Query: 656  NLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV 715
            NLE+ E+     +  +L A L+   TA G RLLR W+ +PL     ++ RQ AVA L  V
Sbjct: 344  NLELLESGGRQGAKASLIAVLDRTCTAMGARLLRRWITQPLIVIEPLQVRQHAVARL--V 401

Query: 716  NQPFA-LEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG 774
             +  A LE R AL+ LPDMER L R+     A G           A  + + +  +AL  
Sbjct: 402  AETMARLEVRSALADLPDMERALNRI-----AQGITV--------ATPRDMTQLRAALRK 448

Query: 775  CELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV-----SILKHFKDAFD------- 822
               + QA  +L   L   E         PG+  P +V      +L   + A D       
Sbjct: 449  LPAVAQAVQALLPDLLAAE--------MPGE--PPLVFDVCADVLDLLERALDDDPPALL 498

Query: 823  ----WVEANNSG----RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
                ++ A   G    R +   G D   D+  +  +  +  + +   ++R+    T I  
Sbjct: 499  GSSNYLRAAEEGGERPRRVIRPGFDQRLDALIRASRHAQEFIDRLESKERE---RTGIRS 555

Query: 875  VTIGKDL---YLLEVPESLRGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
            + +G +    Y +E+  ++    +P  YE + +     RY T  +K   G LS A  +  
Sbjct: 556  LKVGYNQVFGYYIEISRAVDAKLIPAHYERKQTLVNAERYVTEELKYYEGLLSDARLKLV 615

Query: 931  SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
               + I QRL  +   H ++ R  +AA A +DA    A+A     G   +P +       
Sbjct: 616  DLERDIFQRLCDELQPHLDRLRATIAAVARIDA--LAALAEVAVRGRYVQPRL-----RT 668

Query: 991  EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
            +  +  K   HPV+   +L +  F+ NDI + G   A  +++TGPNM GKST LRQV L 
Sbjct: 669  DRVLRIKQGRHPVVER-TLSE-PFIGNDIDLDGE-QAQILIITGPNMAGKSTFLRQVALI 725

Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLV 1110
             ++AQ+G+ VPA+  EI  VDRIF R+GA+D I  GQSTF+ E++ETA +L  +T  SL+
Sbjct: 726  TLMAQIGSFVPADEAEIGLVDRIFTRIGAQDDIATGQSTFMVEMTETAALLMQSTPRSLI 785

Query: 1111 VLDELGRGTSTSDGQAIAESVLEHFVH---KVQCRGLFSTHYHRLAVDYKKDPRVSLCHM 1167
            +LDE+GRGTST DG AIA +V+E ++H   ++ CR LF+THYH L    ++ PRV   HM
Sbjct: 786  ILDEVGRGTSTYDGMAIARAVVE-YIHDHPRLGCRTLFATHYHELIALERELPRVRNYHM 844

Query: 1168 ACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKSTEFE 1222
            A    +G      V FL+ L PG   +SYG++VA LAGIP +V+++A A   + E
Sbjct: 845  AAVERDG-----RVVFLHELRPGGADRSYGIHVAELAGIPPEVIRRASALLADLE 894


>sp|C0MAS5|MUTS_STRE4 DNA mismatch repair protein MutS OS=Streptococcus equi subsp. equi
            (strain 4047) GN=mutS PE=3 SV=1
          Length = 851

 Score =  305 bits (781), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 267/910 (29%), Positives = 422/910 (46%), Gaps = 140/910 (15%)

Query: 326  NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
            N+S G +Q+ + K  + D  + F+MG FYELF  DA   A+ L++      +      P 
Sbjct: 5    NVSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPM 64

Query: 380  CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
             G P  +    ++ L   G++V + EQ E P+Q             VVKRE+  V+T GT
Sbjct: 65   AGVPYHSVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGT 114

Query: 440  LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
              +    S+ PD+        +N   A     + +G+  +DV+T         D  D + 
Sbjct: 115  AVD----SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFAS 160

Query: 500  LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
            +   +  L+  E++    +   E E+AIL    N L++           E T LE     
Sbjct: 161  VKSEIQNLKAKEVLLGFEL--SEEEQAILVKQLNLLLS----------FEMTALE----- 203

Query: 560  NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
                       DS + + Q     LT +                 LSA G  L Y+    
Sbjct: 204  -----------DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH--- 228

Query: 620  LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
              +T LR    EL           K Y+ +      +L++ EN+R+G   G+LY  L+  
Sbjct: 229  --QTQLR----ELSHLQALVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDET 282

Query: 680  VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDM 733
             TA G RLLR W+ RPL  S  I ERQ+ +       Q F   F +      +L  + D+
Sbjct: 283  KTAMGMRLLRAWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDI 335

Query: 734  ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
            ERL +R+     + G+ + K +L       QL   ++              + AILE   
Sbjct: 336  ERLSSRV-----SFGKANPKDLL-------QLGHTLA----------KVPYIKAILEAFN 373

Query: 794  SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
            S  L  ++     LP +  +++   D  D     N G II   G D   D   K ++E  
Sbjct: 374  SPYLDKLVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGT 431

Query: 854  ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
              +     ++R+  G +++      KD Y   V  S  G VP  +  +++ K   RY T 
Sbjct: 432  GWIADIETKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTA 491

Query: 914  NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
             + K+ G++ +A  E  S    I  R+  Q   + ++ +Q+  A A +D L SLA+ ++ 
Sbjct: 492  ELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVLQSLAVVAE- 550

Query: 974  YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
             +    RP+      N+E  I+  +  H V+    LG  E++PN I+ G     S  L+T
Sbjct: 551  -KNHYVRPLF-----NQESKIAIDNGRHAVVEK-VLGVQEYIPNSISFGPQ--TSIQLIT 601

Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
            GPNM GKST +RQ+ L VI+AQ+G+ V AE   +   D IF R+GA D +++GQSTF+ E
Sbjct: 602  GPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAADDLISGQSTFMVE 661

Query: 1094 LSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLA 1153
            + E    +  AT +SL++ DELGRGT+T DG A+A+S++E+   +V  + +F+THYH L 
Sbjct: 662  MMEANHAIKRATPHSLILFDELGRGTATYDGMALAQSIIEYIHDRVGAKTMFATHYHELT 721

Query: 1154 VDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQK 1213
                K  ++   H+A    +G      VTFL++++ G   KSYG++VAR+AG+P+ +L +
Sbjct: 722  ELSTKLTKLVNVHVATLEKDG-----NVTFLHKIAEGPADKSYGIHVARIAGLPEDLLAR 776

Query: 1214 AVAKSTEFEA 1223
            A    T+ EA
Sbjct: 777  ADTVLTKLEA 786


>sp|Q2UT70|MSH3_ASPOR DNA mismatch repair protein msh3 OS=Aspergillus oryzae (strain ATCC
            42149 / RIB 40) GN=msh3 PE=3 SV=1
          Length = 1111

 Score =  304 bits (778), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 260/935 (27%), Positives = 431/935 (46%), Gaps = 96/935 (10%)

Query: 325  RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
            R L+  +KQ  + K KHMD V+  ++G  +  F  DA   AKEL++  + G     E P 
Sbjct: 196  RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255

Query: 380  ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
                        P     ++V++L   G++V VV Q ET       +    +++    R+
Sbjct: 256  EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311

Query: 431  ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
            +  + TKGT        EG   S +   +     Y++ +TE+N            GI  V
Sbjct: 312  LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371

Query: 480  DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
              AT  I+  +  D    S +   L  L P E++   + LS  TE+ +  L   +     
Sbjct: 372  QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430

Query: 538  DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
            D + +     A+T   E  +  +   AE + K +   A +  +   L      L ++++ 
Sbjct: 431  DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVN---ATNDVQASSL------LQKVLNL 481

Query: 598  GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
             +  +  LS++   + ++ +  L E + +  K+       F   + + +M+L+A  L +L
Sbjct: 482  SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530

Query: 658  EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
            E++ N     + G+L+  L+   T FG+R+LR W+ RPL N   + ER DAV  L+ + +
Sbjct: 531  EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590

Query: 718  PFALEFRKAL-SRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
               +E  K L  R+  D+E+ L R++       E         ++ ++ A   +Q     
Sbjct: 591  VALVEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648

Query: 772  LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
                 L+ +A +SL  ILE+             + L  I        D +++  E+  + 
Sbjct: 649  GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697

Query: 831  RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
             I  H             +  +E  L +H     ++LG   + YVT+    YL+ V    
Sbjct: 698  EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747

Query: 889  -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
             S++  VP  +   S  K   R+ TP + +LL +  Q +    +         + +    
Sbjct: 748  PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806

Query: 948  HNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
            +  +R  V + A LD LISLA  ++       +P  +         I      HP++  +
Sbjct: 807  YQSFRDSVQSLATLDCLISLATIAN-------QPGYVKPEYTNHTCIQVDQGRHPMV--E 857

Query: 1008 SLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
             L    +VPNDI +      + +L+TGPNMGGKS+ +RQV L  I+ Q+G+ VPA   ++
Sbjct: 858  QLLLDSYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSAKL 916

Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAI 1127
              +D +F RMGA D+++AG+STF+ ELSETA +L  AT  SLV+LDELGRGTST DG AI
Sbjct: 917  GMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAI 976

Query: 1128 AESVLEHFVHKVQCRGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRL 1187
            A++VL++ +  ++   LF THY  L+      P   L ++  +        EE+TFLY +
Sbjct: 977  AQAVLDYMIRSIRSLTLFITHYQHLSSMVHSFPDHELRNVHMRFTESGPTEEEITFLYEV 1036

Query: 1188 SPGACPKSYGVNVARLAGIPDKVLQKAVAKSTEFE 1222
              G   +SYG+NVARLA +P  +++ A  KS E E
Sbjct: 1037 REGVAHRSYGLNVARLANLPAPLIELAKQKSAELE 1071


>sp|Q0CPP9|MSH3_ASPTN DNA mismatch repair protein msh3 OS=Aspergillus terreus (strain NIH
            2624 / FGSC A1156) GN=msh3 PE=3 SV=1
          Length = 1117

 Score =  302 bits (774), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 259/929 (27%), Positives = 438/929 (47%), Gaps = 90/929 (9%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
            L+  ++Q  + K KHMDK++  ++G  +  F  DA V AKEL +  + G     E P   
Sbjct: 206  LTPMERQIIDMKRKHMDKILAVQVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEA 265

Query: 380  -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
                      P     ++V++L   G++V +V Q ET       +    +++    R++ 
Sbjct: 266  HLDRFASASIPVHKLHVHVKRLITAGHKVGIVRQIETAAL----KAAGDNRNAPFVRKLT 321

Query: 433  AVVTKGTLT---EG-----ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
             V TKGT     EG               Y++ +TE+N            GI  V  AT 
Sbjct: 322  NVYTKGTYIDDMEGLEGPTAGAGTTAATGYMLCITETNAKGWGNDEKVHVGIVAVQPATG 381

Query: 485  RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
             I+     D    S +   L  L P E++   + LS  +++ +  L  ++  +  D V +
Sbjct: 382  DIVFDDFEDGFMRSEIETRLLHLAPCELLIVGD-LSKASDKLVQHLAGSKMNVFGDKVRV 440

Query: 543  SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
                 ++T   E  +  +   A+ +  A+++  ++QA          +L ++++  +  S
Sbjct: 441  ERTTKSKTAAAEAHSHVSSFYADKVKSANAS-DDTQASN--------LLQKVLNLPEQVS 491

Query: 603  QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
              LS++   + ++ +  L E +    K+       F   + + +M+L+   L +LE+++N
Sbjct: 492  ICLSSM---IKHMTEYGL-EHVFDLTKY-------FQHFSSRSHMLLNGNTLMSLEIYQN 540

Query: 663  SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
                 S G+L+  L+   T FG+RLLR W+ RPL +   + ER +A+  L+ + +   +E
Sbjct: 541  QTDHSSRGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSKLEERVNAIEELKSMEKVAMVE 600

Query: 723  -FRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
              +  L +   D+E++L R++               Y    + +L      L G + +  
Sbjct: 601  RLKGVLGKAKCDLEKILIRIY---------------YGRCTRPEL------LTGLQTLQM 639

Query: 781  ACSSLGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
                 G +    +S     IL      LP I+  +  F +  +   A N  +       +
Sbjct: 640  IAQEFGDVKSPEDSGFTTPILNEAIASLPTILEDVLSFLNKINLHAARNDDKYEFFREAE 699

Query: 840  MDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE--SLRGSVP 895
               D +  K  +  +E  L ++     K+LG + I YVT+    YL+EV    S    VP
Sbjct: 700  ETEDISEHKLGIASVEHELREYQSVAGKILGRSKIQYVTVAGIDYLIEVENNSSYLKRVP 759

Query: 896  RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
              +   S  K   R+ +P + KLL +  Q +    +A       L+ +   ++  +R  V
Sbjct: 760  ASWVKISGTKKLSRFHSPEVIKLLRQRDQHKEALAAACDHAYASLLAEIAANYQPFRDCV 819

Query: 956  AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFV 1015
             + A +D L+SL+  ++  +    +P   D+       I  +   HP++  + L    +V
Sbjct: 820  QSLATIDCLLSLSSIAN--QPGYVKPEYADNTC-----IHVEQGRHPMV--EQLLLDSYV 870

Query: 1016 PNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
            PNDI +      + +L+TGPNMGGKS+ +RQ+ L  I+ QVG+ VPA+  ++  +D +F 
Sbjct: 871  PNDINLDSEETRA-LLVTGPNMGGKSSYVRQIALIAIMGQVGSYVPAQSAKLGMLDAVFT 929

Query: 1076 RMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHF 1135
            RMGA D+++AG+STF+ ELSETA +L  AT  SLV+LDELGRGTST DG AIA++VL++ 
Sbjct: 930  RMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYM 989

Query: 1136 VHKVQCRGLFSTHYHRLAVDYKKDPRVSL--CHMACQVGNGVGGVEEVTFLYRLSPGACP 1193
            V  ++   LF THY  L+      P   L   HM     +G G  EE+TFLY +  G   
Sbjct: 990  VRSLRSLTLFITHYQHLSSMVHSFPNHELRNVHMRF-TESGSGQDEEITFLYEVGEGVAH 1048

Query: 1194 KSYGVNVARLAGIPDKVLQKAVAKSTEFE 1222
            +SYG+NVARLA +P  +++ A  KS E E
Sbjct: 1049 RSYGLNVARLANLPVPLIEVAKQKSAELE 1077


>sp|A2R1F6|MSH3_ASPNC DNA mismatch repair protein msh3 OS=Aspergillus niger (strain CBS
            513.88 / FGSC A1513) GN=msh3 PE=3 SV=2
          Length = 1119

 Score =  301 bits (771), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 263/933 (28%), Positives = 431/933 (46%), Gaps = 95/933 (10%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
            L+  +KQ  + K KHMD V+  ++G  +  F  DA V AKEL +  + G     E P   
Sbjct: 207  LTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSEA 266

Query: 380  --------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREI 431
                       P     ++V++L   G++V VV Q ET       +    +++    R++
Sbjct: 267  SHLDRFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAA----LKAAGDNRNAPFVRKL 322

Query: 432  CAVVTKGT-LTEGELLS---------ANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
              + TKGT + + E L          A+P   YL+ +TE+N            GI  V  
Sbjct: 323  TNLYTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQP 382

Query: 482  ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDL 539
            AT  I+     D    S +   L  + P E++     LS  TE+ +  L  ++  +  D 
Sbjct: 383  ATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGE-LSKATEKLVQHLSGSKLNVFGDK 441

Query: 540  VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
              +     ++T   E  +  +   A  +  A +      +          +L ++++  +
Sbjct: 442  TRVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASS---------LLQKVLNLPE 492

Query: 600  SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
               QV   L   + ++K+  L E +    K+       F   + + +M+L+   L +LE+
Sbjct: 493  ---QVTICLSSMIEHMKEYGL-EYVFELTKY-------FQHFSSRSHMLLNGNTLMSLEI 541

Query: 660  FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
            ++N     + G+L+  L+   T FG+R+LR W+ RPL +   + ER +AV  L+   +  
Sbjct: 542  YQNQTDHTTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKNPEKTV 601

Query: 720  ALEFRKAL--SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCEL 777
             +E  K L      D+E+ L R++                    K    E ++ L   ++
Sbjct: 602  MVERLKGLLGKVKSDLEKSLIRIYY------------------GKCTRPELLTVLQTMQM 643

Query: 778  MDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
            + Q  S + +  +    S  ++  +T    LP I+  +  F D  +   A +  +     
Sbjct: 644  IAQEFSDVKSPADTGFASTAINEAIT---CLPTILEDVVAFLDKINMHAAKSDDKYAFFR 700

Query: 837  GVDMDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-- 892
              +   D + +K  +  +E  L +H     + LG  ++ Y ++    YL+EV  S     
Sbjct: 701  EAEETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENSSASIK 760

Query: 893  SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
             VP  +   S  K   R+ TP + +L+ +  Q +    +A       L+      +  +R
Sbjct: 761  RVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATKYQPFR 820

Query: 953  QMVAATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGK 1011
              V A A LD LI+LA IAS        +P  +     +   I      HP++  + L  
Sbjct: 821  DSVQALATLDCLIALATIAS--------QPGYVKPEYTDHTCIQVDQGRHPMV--EQLLL 870

Query: 1012 GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
              +VPNDI +      + +L+TGPNMGGKS+ +RQV L  I+ Q+G+ VPA+  ++  +D
Sbjct: 871  DSYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLD 929

Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESV 1131
             +F RMGA D+++AG+STF+ ELSETA +L  AT  SLV+LDELGRGTST DG AIA++V
Sbjct: 930  AVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAV 989

Query: 1132 LEHFVHKVQCRGLFSTHYHRLA--VDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSP 1189
            L++ V  ++   LF THY  L+  V    D  +   HM     +G G  EE+TFLY +  
Sbjct: 990  LDYMVRSIRSLTLFITHYQHLSSMVHSFADQELRNVHMRF-TESGTGTDEEITFLYEVGE 1048

Query: 1190 GACPKSYGVNVARLAGIPDKVLQKAVAKSTEFE 1222
            G   +SYG+NVARLA +P  +L +A  KS E E
Sbjct: 1049 GVAHRSYGLNVARLANLPGALLDQARQKSKELE 1081


>sp|Q30ZX3|MUTS_DESDG DNA mismatch repair protein MutS OS=Desulfovibrio desulfuricans
            (strain G20) GN=mutS PE=3 SV=1
          Length = 904

 Score =  293 bits (751), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 277/908 (30%), Positives = 421/908 (46%), Gaps = 130/908 (14%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
            +Q+   K+++ D ++F++MG FYELF  DA V A+EL +         + + P CG P  
Sbjct: 13   EQYMNIKAEYPDALLFYRMGDFYELFFEDAEVAARELQIALTCRNPNAENKVPMCGVPHH 72

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
            +    + +L  KGY+V + EQ E P      R+ KG    +VKR +  V+T GT  E E 
Sbjct: 73   SARSYISQLVDKGYKVAICEQMEDP------REAKG----LVKRGVIRVLTSGTALEDEN 122

Query: 446  LSANPDA-SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
            LS  P A +YL AL       A        G   VD +T      Q   + +   L   +
Sbjct: 123  LS--PKAHTYLGALCWDKSEGAG-------GFAWVDFSTGEWSGLQSRKEQE---LWQWV 170

Query: 505  SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
             ++ P E++  A+ L+P    A L  T        VP   ++D           Y R +A
Sbjct: 171  QKMAPRELLL-ADTLTPP---ASLELTETQFSK--VPERAYFD-----------YKR-SA 212

Query: 565  ESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFLDET 623
            E +  A                    ++EL + G ++  +++ A G  L YL ++     
Sbjct: 213  EKIMSAQQ------------------VAELGALGLENRKELVRACGALLTYLSQT----- 249

Query: 624  LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
                 K +L     F  +    +++LD     NLE+F         GTL+  L+H VT  
Sbjct: 250  ----QKQDLNHLCQFKPLNLNRHLLLDEITERNLELFRRLDGRKGKGTLWHVLDHTVTPM 305

Query: 684  GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
            G RLL+  L  P      I E Q+AV+     N     + R+AL  + D+ERL  R+F  
Sbjct: 306  GGRLLQERLKHPWREQAPIDETQEAVSHFFAHNT-LRRQLREALDTVYDIERLSTRIFL- 363

Query: 744  SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
                    N+    +  A +Q  + + A+   EL++   +  G     T   QL      
Sbjct: 364  --------NRATPRDYVALRQSLKALPAVR--ELLEAPQTGDGRY--ATPEEQL------ 405

Query: 804  GKGLPAIVS-ILKHFKDAFDWVE------ANNSGRIIPHGGV-DMDYDSACKKVKEIEAS 855
            G  LP  +  +LK + D  D+ +       +N   +I  GG+    +  A  ++ ++   
Sbjct: 406  GAALPPFLHRMLKSWDDLADYHDLLEKALVDNPPHVITEGGLFRQGFHPALDELMDLSEH 465

Query: 856  LTKHLKEQRKLLGD----TSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
                L +   LL +    T I+ + +G +    Y  EVP+S+   +P  +  R +     
Sbjct: 466  GASKLHD---LLAEVQQTTGISKIKLGNNRVFGYYFEVPKSVSEELPDTFVRRQTLANAE 522

Query: 909  RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
            RY +  +K+L  +L  A  ++++    + Q+L     +   +   M    A LD    LA
Sbjct: 523  RYTSERLKELEEKLFSAADKRKTMELKLFQQLREHVAQARPRVLFMADLLATLDHWQGLA 582

Query: 969  IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
             A+  +     RPV+ D        I  +   HPV+ +   G   F+PND+ I       
Sbjct: 583  EAARHWNW--VRPVLHDGQD-----IVIREGRHPVVEAVQ-GPAGFIPNDLRIDDQRR-- 632

Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
             +L+TGPNM GKST+LRQ  +  ILAQ+G+ VPA    I   DRIF R+GA D++  GQS
Sbjct: 633  LLLITGPNMAGKSTVLRQAAIICILAQIGSFVPAREARIGLCDRIFSRVGASDNLAQGQS 692

Query: 1089 TFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQC--RGLFS 1146
            TF+ E+ ETA +L  ATR SLV+LDE+GRGTST DG A+A +V+E  + K Q   R LF+
Sbjct: 693  TFMVEMMETARILRQATRRSLVILDEIGRGTSTFDGLALAWAVVEELMKKQQAGIRTLFA 752

Query: 1147 THYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGI 1206
            THYH L       P V   ++A +   G     E+ FL RL PG   +SYGV VA+LAG+
Sbjct: 753  THYHELTSLEGTIPGVHNMNIAIKEWGG-----EIVFLRRLVPGPSDRSYGVEVAKLAGV 807

Query: 1207 PDKVLQKA 1214
            P  V+Q+A
Sbjct: 808  PQNVVQRA 815


>sp|Q87XW6|MUTS_PSESM DNA mismatch repair protein MutS OS=Pseudomonas syringae pv. tomato
            (strain DC3000) GN=mutS PE=3 SV=1
          Length = 855

 Score =  293 bits (750), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 261/921 (28%), Positives = 418/921 (45%), Gaps = 151/921 (16%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W+ K++H+D+++F++MG FYE+F  DA   AK LD+      Q      P CG P  
Sbjct: 12   QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL + G  V++ EQ   P         KG  D    R++  ++T GT+++  L
Sbjct: 72   AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 121

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ V+D+ +       V++      L   L 
Sbjct: 122  LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 168

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             + PVE++ P +    L  E  R   R  R P           WD E      K++  + 
Sbjct: 169  RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 214

Query: 563  TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
            + + L               G  CL G   E   T              L  L+   LD+
Sbjct: 215  STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 262

Query: 623  TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
            T                       ++LDA +  NLE+ + + SG    TL + ++ C TA
Sbjct: 263  T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 298

Query: 683  FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
             G RLL  WL RPL +  +++ RQ ++       + +  E  +  L  + D+ER+LAR  
Sbjct: 299  MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 353

Query: 742  ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
                         +   +A  + L     AL     + QA + L A         L  + 
Sbjct: 354  -------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQLA 393

Query: 802  TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
                  P +  +L+   +       +N   +I  GGV    YD+   +++ +  +  + L
Sbjct: 394  QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 446

Query: 861  KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
             + + +    T ++++ +G +    Y +E+P       P DY  R + KG  R+ TP +K
Sbjct: 447  IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 506

Query: 917  ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
                K L   S+A + ++   +++L+ LIG    H    +   AA AELD L +LA    
Sbjct: 507  EFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 558

Query: 973  FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
                   R + LD +C     EP +  +   HPV+  + +    FV ND+ +    +   
Sbjct: 559  ------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLALDD--STRM 608

Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
            +++TGPNMGGKST +RQ  L V+LA +G+ VPA   E+S VDRIF R+G+ D +  G+ST
Sbjct: 609  LIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 668

Query: 1090 FLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHY 1149
            F+ E+SETA +L +AT  SLV++DE+GRGTST DG ++A +  E    +++   LF+THY
Sbjct: 669  FMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLA-QLRAYTLFATHY 727

Query: 1150 HRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDK 1209
              L V  + +P V+  H+     N     E + FL+R+ PG   +SYG+ VA+LAG+P K
Sbjct: 728  FELTVLPESEPLVNNVHL-----NATEHNERIVFLHRVLPGPASQSYGLAVAQLAGVPGK 782

Query: 1210 VLQKAVAKSTEFEAIYGKHKK 1230
            V+ +A       E     H++
Sbjct: 783  VITRAKEHLQRLETTSLPHEQ 803


>sp|A8AZU4|MUTS_STRGC DNA mismatch repair protein MutS OS=Streptococcus gordonii (strain
            Challis / ATCC 35105 / CH1 / DL1 / V288) GN=mutS PE=3
            SV=1
          Length = 847

 Score =  292 bits (748), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 250/923 (27%), Positives = 424/923 (45%), Gaps = 143/923 (15%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
            +S G +Q+ + K  + D  + F+MG FYELF  DA   A+ L++      +      P  
Sbjct: 6    ISPGMQQYLDIKKDYQDAFLLFRMGDFYELFYEDAVNAAQILEIALTSRNKNSENPIPMA 65

Query: 381  GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
            G P  +    ++ L   GY+V + EQ E P+Q             VVKRE+  V+T GT+
Sbjct: 66   GVPYHSAQQYIDVLIESGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115

Query: 441  TEGELLSANP--DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
             +    S+ P  + ++L+AL    Q          +G+  +D+AT      QV    D  
Sbjct: 116  VD----SSKPVGENNFLVALDRQEQ---------AYGLAYMDLATGEF---QVTSLADFD 159

Query: 499  VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
              C  +  LR  E++        E E+ IL    N L                       
Sbjct: 160  QACGEIRNLRAREVV--VGYCLSEDEQQILSKQMNLL----------------------- 194

Query: 559  YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
                    L++ +  + + Q  GD L+ L     E  + G   + V       L +LKK 
Sbjct: 195  --------LSEVEEAMEDVQLLGDELSSL-----EKQTAGKLLAYVFQTQMRELSHLKK- 240

Query: 619  FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
                       +E+           K ++ +D     +L++ EN+R+G   G+L+  ++ 
Sbjct: 241  --------VHHYEI-----------KDFLQMDYATKTSLDLTENARTGKKHGSLFWLMDE 281

Query: 679  CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDMER 735
              TA G RLLR+W+  PL + G I +RQD V     V   +  E      +L  + D+ER
Sbjct: 282  TKTAMGGRLLRSWIQHPLIDKGRIIKRQDVVQ----VFLDYFFERSDLADSLKGVYDIER 337

Query: 736  LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
            L++R+     + G+ + K +L       QL   +S              + +ILE  ES 
Sbjct: 338  LVSRV-----SFGKTNPKDLL-------QLASTLSH----------VPQIRSILETIESP 375

Query: 796  QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
             L  ++     +P + +++    D  D  +    G II   G D   D     ++E  + 
Sbjct: 376  ALESLVARLDAIPELENLISSAIDP-DAPQVITEGNII-RTGFDETLDQYRLVMREGTSW 433

Query: 856  LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
            +     ++R+  G T++      KD Y   V  S  G+VP  +  +++ K   R+ T  +
Sbjct: 434  IADIEAKEREASGITNLKIDYNKKDGYYFHVTNSQLGNVPSHFFRKATLKNSERFGTEEL 493

Query: 916  KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
             ++ GE+ +A  +  +    I  R+  +  ++  + + +    A +D L S A+ ++   
Sbjct: 494  ARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQTLATVDVLQSFAVVAE--S 551

Query: 976  GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
                RP    S S     +  K   H V+    +G   ++PN I +    +    L+TGP
Sbjct: 552  QHLVRPSFTSSRS-----LQIKKGRHAVVEK-VMGAQSYIPNSIELDQETDIQ--LITGP 603

Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
            NM GKST +RQ+ + VI+AQ+G+ VPAE+  +   D IF R+GA D +++GQSTF+ E+ 
Sbjct: 604  NMSGKSTYMRQLAMIVIMAQMGSYVPAEVASLPIFDAIFTRIGAADDLVSGQSTFMVEMM 663

Query: 1096 ETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVD 1155
            E    +  A+  SL++ DELGRGT+T DG A+A++++E+   + + + LF+THYH L   
Sbjct: 664  EANRAIRQASERSLILFDELGRGTATYDGMALAQAIIEYIHDRTKAKTLFATHYHELTDL 723

Query: 1156 YKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAV 1215
                 R+   H+A    +G     +VTFL+++  G   KSYG++VA++AG+P  +L++A 
Sbjct: 724  SSSLTRLENVHVATLEKDG-----QVTFLHKIEAGPADKSYGIHVAKIAGLPTDLLRRAD 778

Query: 1216 AKSTEFEAIYGKHKKESEENLPA 1238
            A  T+ E     ++++ E +LPA
Sbjct: 779  AILTDLE-----NQEKREASLPA 796


>sp|Q3JCL5|MUTS_NITOC DNA mismatch repair protein MutS OS=Nitrosococcus oceani (strain ATCC
            19707 / NCIMB 11848) GN=mutS PE=3 SV=1
          Length = 863

 Score =  291 bits (746), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 270/906 (29%), Positives = 420/906 (46%), Gaps = 132/906 (14%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
            +Q+   K+++ + ++ ++MG FYELF  DA   ++ LD+         GE  P  G P  
Sbjct: 15   QQYLRIKAEYPNTLLLYRMGDFYELFYDDAQRASELLDIALTSRGRSAGEPIPMAGIPYH 74

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + +L R+G  V + EQ   P         KG     V+R++  ++T GT+TE  L
Sbjct: 75   ALDSYLARLVRQGESVAICEQIGNPA------ASKGP----VERQVVRIITPGTVTEEAL 124

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L A  D          N   A Q     FG  V+D+ + R  + +V  +   +      S
Sbjct: 125  LEARRD----------NLLAALQKEGDVFGFAVLDLCSGRFNILEVASESAAT------S 168

Query: 506  ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
            EL     I+PA +L  E    IL  ++   V   +P   ++D E+   ++   +      
Sbjct: 169  EL---ARIRPAELLVSEDLALILVDSKTEAVVRPLP-PWYFDRESAQRQLCRQF------ 218

Query: 566  SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
                             G   L G   E + T       ++A G  L Y++    D    
Sbjct: 219  -----------------GTQDLAGFGCEEMKTA------IAAAGCLLHYVQ----DTQRT 251

Query: 626  RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS-GTLYAQLNHCVTAFG 684
            +F     L         ++  ++LD     NLE+ E S SGDS   TL A L+H  TA G
Sbjct: 252  QFPHIHALQVE-----RQETSIILDPSTRRNLEL-EESLSGDSGRNTLIAVLDHTATAMG 305

Query: 685  KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
             RLLR +L RPL +  L+++RQ A+A L  +    +   +  L  + D+ER+L+R     
Sbjct: 306  SRLLRRYLHRPLRDQTLLKQRQQALATL--LEGGLSDVLQTLLRGIGDIERILSR----- 358

Query: 745  EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
                      V    A  + L +F  AL     + ++   L     N +S  L  +    
Sbjct: 359  ----------VALRSARPRDLVQFRQALGLLPKIQESLLQL-----NRDSLLLQSLQEDL 403

Query: 805  KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL-KE 862
               P +  +L+            N   +I  GGV  + +DS   +++ +  +  + L K 
Sbjct: 404  GPFPNLHELLQR-------AICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVKL 456

Query: 863  QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
            +++    T I  + +G +    Y LE+  +     P DY  R + KG  RY TP +K   
Sbjct: 457  EQRERERTKIPTLKVGYNKVHGYYLEITRAQAHQAPPDYIRRQTLKGAERYITPELK--- 513

Query: 920  GELSQAESEKESAL---KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
            G   Q  S +E AL   K++ + L+ QF E     R    A AELD L +LA  +   E 
Sbjct: 514  GFEDQVLSARERALAREKALYEELLEQFMEPLPALRACANALAELDVLHNLAERAKTLE- 572

Query: 977  PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
                P++ D     +P I  +   HPV+  +   +  FVPND+T+  H     +++TGPN
Sbjct: 573  -YVAPLLSD-----QPGIFIERGRHPVV--EQTLEDPFVPNDLTL--HEARRMLIITGPN 622

Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
            MGGKST +RQ  L V+LA +G+ VPA    I P+DRIF R+GA D +  G+STF+ E++E
Sbjct: 623  MGGKSTYMRQTALIVLLAHIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTE 682

Query: 1097 TALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDY 1156
            TA +L +AT +SLV+LDE+GRGTST DG ++A +V+ H  +KV+   LF+THY  L    
Sbjct: 683  TANILHNATEHSLVLLDEVGRGTSTFDGLSLAWAVVSHLANKVRSLTLFATHYFELTTLP 742

Query: 1157 KKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVA 1216
            +  P V   H+           E + FL+ +  G   +SYG+ VA LAG+P +++ +A  
Sbjct: 743  ECLPGVVNLHLTATEHK-----EHIVFLHAVKEGPASQSYGLQVAALAGVPQEIIAQARQ 797

Query: 1217 KSTEFE 1222
            +  E E
Sbjct: 798  QLMELE 803


>sp|C1DSR1|MUTS_AZOVD DNA mismatch repair protein MutS OS=Azotobacter vinelandii (strain DJ
            / ATCC BAA-1303) GN=mutS PE=3 SV=1
          Length = 855

 Score =  291 bits (746), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 271/927 (29%), Positives = 419/927 (45%), Gaps = 165/927 (17%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W+ K +H D+++F++MG FYELF  DA   AK LD+      Q      P  G P  
Sbjct: 12   QQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFH 71

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
            +    + KL + G  V + EQ   P           +    V+R++  ++T GT+++  L
Sbjct: 72   SVEGYLAKLVKLGESVAICEQIGDP----------ATTKGPVERQVVRIITPGTVSDEAL 121

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ ++D+ + R  + ++        L   L 
Sbjct: 122  LDERRD----------NLLAAVVGDERLFGLAILDITSGRFNVQEIQG---WENLLAELE 168

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             L P E++ P +    L  E  R    H R P           WD      +  + Y  +
Sbjct: 169  RLNPAELLYPDDWPAGLPLEKRRGA--HRRAP-----------WD-----FDFDSAYKSL 210

Query: 563  TAESLNKADSNVANSQAEG---DGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKS 618
              +         A    +G   DGL    G    L++   ++    L  L G    L+  
Sbjct: 211  CQQ--------FATQDLKGFGCDGLGLAIGAAGCLLAYARETQRTALPHLRG----LRHE 258

Query: 619  FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
             LD+T                       ++LD  +  NLE+  N  SG    TL + ++ 
Sbjct: 259  RLDDT-----------------------VILDGASRRNLELDVNL-SGGRDNTLQSVIDR 294

Query: 679  CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLL 737
            C TA G RLL  WL RPL +  ++  RQD VA L    Q +  E  +  L  + D+ER+L
Sbjct: 295  CQTAMGSRLLGRWLNRPLRDRAVLEARQDTVACLL---QDYRFESLQPQLKEIGDVERIL 351

Query: 738  ARLFASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
            AR+      N R  +   L +  AA  QLQ  +S L    L  QA +  G I        
Sbjct: 352  ARI---GLRNARPRDLARLRDALAALPQLQTALSPLEAPHL--QALA--GNI-------- 396

Query: 797  LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEAS 855
                    +  P +  +L+           +N   +I  GGV    YD+   ++  +  +
Sbjct: 397  --------RTYPELAELLRR-------AIIDNPPAVIRDGGVLKQGYDAELDELLSLSEN 441

Query: 856  LTKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
              + L      ++ R  L +  + Y  I    Y +E+P       P DY  R + KG  R
Sbjct: 442  AGQFLMDLEAREKARTGLPNLKVGYNRIHG--YYIELPRVQAEQAPADYIRRQTLKGAER 499

Query: 910  YWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
            + TP +K    K L   S+A + +++  + +L+ LI Q        ++   A AELD L 
Sbjct: 500  FITPELKAFEDKALSAKSRALAREKALYEELLEILIAQLA----PLQETATALAELDVLA 555

Query: 966  SLA---IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
            +LA   +  DF      RP  +     EEP +  +   HPV+  + +    FV ND+ + 
Sbjct: 556  NLAERALNLDF-----NRPRFV-----EEPCLRIRQGRHPVV--EQVLDTPFVANDLEL- 602

Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
               N   +++TGPNMGGKST +RQ  L V+LA +G+ VPA+  E+S VDRIF R+G+ D 
Sbjct: 603  -DDNTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAQSCELSLVDRIFTRIGSSDD 661

Query: 1083 IMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCR 1142
            +  G+STF+ E+SETA +L +A+  SLV++DE+GRGTST DG ++A +  EH    ++  
Sbjct: 662  LAGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWAAAEHLA-GLRAW 720

Query: 1143 GLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVAR 1202
             LF+THY  L V  +  P V+  H++    N     E + FL+ + PG   +SYG+ VA+
Sbjct: 721  TLFATHYFELTVLAESQPVVANVHLSATEHN-----ERIVFLHHVLPGPASQSYGLAVAQ 775

Query: 1203 LAGIPDKVLQKAVAKSTEFEAIYGKHK 1229
            LAG+P  V+ +A       EA    H+
Sbjct: 776  LAGVPGPVISRAREHLARLEATSLPHE 802


>sp|Q2JT35|MUTS_SYNJA DNA mismatch repair protein MutS OS=Synechococcus sp. (strain
            JA-3-3Ab) GN=mutS PE=3 SV=1
          Length = 882

 Score =  291 bits (746), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 273/914 (29%), Positives = 419/914 (45%), Gaps = 129/914 (14%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
            L+   + + E K ++   ++ +++G FYE+F  DA + ++EL+L          G  P C
Sbjct: 6    LTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQLVSRELELVLTGREAGAIGRVPMC 65

Query: 381  GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
            G P   F     +L  KGY + V +Q E  +Q       KG    +V+RE+  V+T GT+
Sbjct: 66   GIPYHAFDRYAAQLVAKGYALAVCDQMEPADQ------AKG----LVRREVTRVITPGTV 115

Query: 441  TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR--IILGQVMDDLDCS 498
             E ELL A  + +YL A+     S  +      +G+   D++T    +  G+  + L+  
Sbjct: 116  IEEELLQARQN-NYLAAIVRLRGSKQT-----VWGLAYADISTGEFWVCQGEGQEQLEQE 169

Query: 499  VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
                 L+ L+P EI+ P       TE  +      P  +   PL          L  +  
Sbjct: 170  -----LARLQPAEILLP-------TEEGLGLGLMRP-GDPQAPLG---------LPGQYT 207

Query: 559  YNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
            Y    AE   L  A  N+  +     GL  L G+  E +         + A GG L YL+
Sbjct: 208  YTLRPAEPFELATARENLLQTY----GLRSLEGLGCEGLPLA------IRAAGGLLHYLE 257

Query: 617  KSFLDETLLRFAKFELLPCSGFGDMAKKP--------YMVLDAPALENLEVFENSRSGDS 668
            ++          K  + P    G    +P        Y++LD     NLE+ +  R G  
Sbjct: 258  ET---------QKNLVQPSPQGGHPLLRPPRTYQLTDYLILDTQTRRNLELTQTIREGAF 308

Query: 669  SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKAL 727
             G+L   L+   TA G R LR WL +PL +   IR RQD +  L  +  P         L
Sbjct: 309  VGSLLWVLDRSRTAMGGRTLRRWLLQPLRDPEQIRLRQDTIQEL--LESPSLRTRLGSLL 366

Query: 728  SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFISA-----LHGCELMDQA 781
              L D+ERL  R+ AS  AN R    V L     K  QL E ++      L   + +D A
Sbjct: 367  DSLYDLERLANRV-ASGTANPREL--VALGSSLGKLPQLAELVAEAQTPLLQSLQQVDPA 423

Query: 782  CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
               LG  +E        H L P    P +++                 G I P  GVD +
Sbjct: 424  LVDLGHRIE--------HTLLPSP--PPVLT---------------EGGLIRP--GVDAE 456

Query: 842  YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYEL 900
             D   ++V++    + +  K +R+  G  ++  V   K   Y L +  +    VP++Y  
Sbjct: 457  LDRLRQQVEQDRHWIAQLEKTERERTGIPTLK-VGFNKAFGYYLSISRAKAQQVPKEYIR 515

Query: 901  RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
            + +     R+ TP +K+    +  A++E       +  +L  +        RQ+    A 
Sbjct: 516  KQTLTNEERFITPELKEKEARILTAQTEINQREYELFVQLRQEAGSQAAAIRQVAQTLAA 575

Query: 961  LDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDIT 1020
            +DAL  LA  +   +G T RPVI    ++    I      HPV+   SL +G FVPN + 
Sbjct: 576  VDALFGLAEVA-VQQGYT-RPVI---TADRRLIIEEGR--HPVV-EKSLPQGLFVPNSVR 627

Query: 1021 IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
            +G       I+LTGPNM GKST LRQ+ L  ILAQ+G+ VPA   E+   DR+F R+GA 
Sbjct: 628  LGSPHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIGAV 687

Query: 1081 DHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQ 1140
            D +  GQSTF+ E++ETA +L+ A   SLV+LDE+GRGT+T DG +IA +V E+   +V+
Sbjct: 688  DDLATGQSTFMVEMNETANILNHAGERSLVLLDEIGRGTATFDGLSIAWAVAEYLATQVR 747

Query: 1141 CRGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNV 1200
             R +F+THYH L       P V+   +  +        + + FL+++ PG   +SYG+ V
Sbjct: 748  ARTIFATHYHELNQLETLLPNVANFQVVVKELR-----DRIIFLHQVQPGGADRSYGIEV 802

Query: 1201 ARLAGIPDKVLQKA 1214
             R+AG+P  V+++A
Sbjct: 803  GRMAGLPQPVIERA 816


>sp|Q48F92|MUTS_PSE14 DNA mismatch repair protein MutS OS=Pseudomonas syringae pv.
            phaseolicola (strain 1448A / Race 6) GN=mutS PE=3 SV=1
          Length = 859

 Score =  291 bits (746), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 263/924 (28%), Positives = 420/924 (45%), Gaps = 157/924 (16%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W+ K++H+D+++F++MG FYE+F  DA   AK LD+      Q      P CG P  
Sbjct: 16   QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL + G  V++ EQ   P         KG  D    R++  ++T GT+++  L
Sbjct: 76   AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ V+D+ +       V++      L   L 
Sbjct: 126  LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             + PVE++ P +    L  E  R   R  R P           WD E      K++  + 
Sbjct: 173  RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218

Query: 563  TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
            + + L               G  C            ++ +  + A G  L Y K++    
Sbjct: 219  STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252

Query: 623  T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
               LR  + E L  +          ++LDA +  NLE+ + + SG    TL + ++ C T
Sbjct: 253  LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301

Query: 682  AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
            A G RLL  WL RPL +  +++ RQ ++       + +  E  +  L  + D+ER+LAR 
Sbjct: 302  AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357

Query: 741  FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
                          +   +A  + L     AL     + QA + L       E+  L  +
Sbjct: 358  --------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQL 396

Query: 801  LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
                   P +  +L+           +N   +I  GGV    YD+    ++ +  +  + 
Sbjct: 397  AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449

Query: 860  L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
            L      ++ R  L +  + Y  +    Y +E+P       P DY  R + KG  R+ TP
Sbjct: 450  LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507

Query: 914  NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
             +K    K L   S+A + ++   +++L+ LIG    H    +   AA AELD L +LA 
Sbjct: 508  ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562

Query: 970  ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
                      R + LD +C     EP +  +   HPV+  + +    FV ND+ +    +
Sbjct: 563  ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609

Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
               +++TGPNMGGKST +RQ  L V+LA +G+ VPA   E+S VDRIF R+G+ D +  G
Sbjct: 610  TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669

Query: 1087 QSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFS 1146
            +STF+ E+SETA +L +AT  SLV++DE+GRGTST DG ++A +  E    +++   LF+
Sbjct: 670  RSTFMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLA-QLRAYTLFA 728

Query: 1147 THYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGI 1206
            THY  L V  + +P VS  H+     N     E + FL+R+ PG   +SYG+ VA+LAG+
Sbjct: 729  THYFELTVLPESEPLVSNVHL-----NATEHNERIVFLHRVLPGPASQSYGLAVAQLAGV 783

Query: 1207 PDKVLQKAVAKSTEFEAIYGKHKK 1230
            P KV+ +A       E     H++
Sbjct: 784  PGKVISRAKEHLQRLETTSLPHEQ 807


>sp|Q2JIA6|MUTS_SYNJB DNA mismatch repair protein MutS OS=Synechococcus sp. (strain
            JA-2-3B'a(2-13)) GN=mutS PE=3 SV=1
          Length = 884

 Score =  291 bits (745), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 280/932 (30%), Positives = 426/932 (45%), Gaps = 127/932 (13%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
            L+   + + E K ++   ++ +++G FYE+F  DA   ++EL+L          G  P C
Sbjct: 6    LTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQRVSRELELVLTGREAGAIGRVPMC 65

Query: 381  GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
            G P   F     +L  KGY + V +Q E  +Q       KG    +V+RE+  V+T GT+
Sbjct: 66   GIPYHAFDRYAAQLVAKGYALAVCDQMEPADQ------AKG----LVRREVTRVITPGTV 115

Query: 441  TEGELLSANPDASYLMA---LTESNQSPASQSTDRCFGICVVDVATSRIILGQV--MDDL 495
             E ELL A  + +YL A   L  S Q+P        +G+   D++T    + Q    + L
Sbjct: 116  LEEELLQARQN-NYLAAVVRLKGSKQAPCR------WGLAYADISTGEFWVCQSEGQEQL 168

Query: 496  DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
            +       L+ L+P E++ P       TE  +      P  +   PL          L  
Sbjct: 169  EQE-----LARLQPAEVLLP-------TEEGLGLGLIRP-GDPQKPLG---------LPN 206

Query: 556  KNIYNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
            +  Y    AE   L  A  N+  +     GL  L G+  E +         + A GG L 
Sbjct: 207  QYAYTLRPAEPFELAVARENLMQTY----GLRSLEGLGCEGLPLA------VRAAGGLLH 256

Query: 614  YLKKSFLDETLLRFAKFELLPCSGFGDMAKKP--------YMVLDAPALENLEVFENSRS 665
            YL+++   +  +   K  L P    G     P        Y++LDA    NLE+ +  R 
Sbjct: 257  YLEETHSPQRCV-APKTLLQPSPQGGHPLLPPPRTYQLTDYLILDAQTRRNLELTQTIRE 315

Query: 666  GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
            G   G+L   L+H  TA G R LR WL +PL +S  IR RQD +  L   N         
Sbjct: 316  GAFVGSLLWVLDHSRTAMGGRTLRRWLLQPLRDSEQIRLRQDTIQELLE-NPSLRARLGS 374

Query: 726  ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFISA-----LHGCELMD 779
             L  L D+ERL  R+  S  AN R    V L     K  QL E +       L   + +D
Sbjct: 375  LLDSLYDLERLANRV-GSGTANPREL--VALGSSLGKLPQLAELVGEAKTPLLQSLQQVD 431

Query: 780  QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
             A   LG        R++ H L P    P I++                 G I P  GVD
Sbjct: 432  PALVDLG--------RRIEHTLLPSP--PPILT---------------EGGLIRP--GVD 464

Query: 840  MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDY 898
             + D   ++V++    + +  K +R   G  ++  V   K   Y L +  +    VP++Y
Sbjct: 465  PELDRLRQQVEQDRQWVAQLEKSERDRTGIPTLK-VGFNKAFGYYLSISRAKAHQVPKEY 523

Query: 899  ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
              + +     R+ TP +K+    +  A+++       +  +L  +        RQ+    
Sbjct: 524  IRKQTLTNEERFITPELKEKEARILTAQTDINQREYELFVQLRQEAGSRAEAIRQVAQTL 583

Query: 959  AELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
            A +DAL  LA  +   +G T RP++    ++    I      HPV+   SL +G FVPN 
Sbjct: 584  AAVDALFGLAEVA-VQQGYT-RPLL---TTDRRLIIEEGR--HPVV-EKSLPQGLFVPNS 635

Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
            + +G       I+LTGPNM GKST LRQ+ L  ILAQ+G+ VPA   E+   DR+F R+G
Sbjct: 636  VQLGSPHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIG 695

Query: 1079 AKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHK 1138
            A D +  GQSTF+ E++ETA +L+ A   SLV+LDE+GRGT+T DG +IA +V E+   +
Sbjct: 696  AVDDLATGQSTFMVEMNETANILNHAGERSLVLLDEIGRGTATFDGLSIAWAVAEYLATQ 755

Query: 1139 VQCRGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGV 1198
            V+ R +F+THYH L       P V+   +  +        + + FL+++ PG   +SYG+
Sbjct: 756  VRARTVFATHYHELNQLETLLPNVANFQVVVKELQ-----DRIIFLHQVQPGGADRSYGI 810

Query: 1199 NVARLAGIPDKVLQKAVAKSTEFEAIYGKHKK 1230
             V R+AG+P  V+Q+A     +  A+  KH +
Sbjct: 811  EVGRMAGLPQPVIQRA----EQVLALVEKHSR 838


>sp|P0CO92|MSH3_CRYNJ DNA mismatch repair protein MSH3 OS=Cryptococcus neoformans var.
            neoformans serotype D (strain JEC21 / ATCC MYA-565)
            GN=MSH3 PE=3 SV=1
          Length = 1191

 Score =  291 bits (744), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 278/964 (28%), Positives = 437/964 (45%), Gaps = 137/964 (14%)

Query: 331  QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
            +KQ+ E K ++ D ++  ++G  Y+    DA   ++EL +           FP RNF   
Sbjct: 243  EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293

Query: 388  -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
                    ++V+KL   GY+V V+ QTET       +K   +++    R++  + T  T 
Sbjct: 294  SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349

Query: 441  TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
             E   L                   +A P  + L+A+ E     AS    +   +CVV  
Sbjct: 350  VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408

Query: 482  ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL------RHT-RNP 534
             T  I   +  D    + L   L+ L P E++ P   LS  TE+ +       +H  RN 
Sbjct: 409  GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNA 468

Query: 535  LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
            +  + +     +DA    L   N Y+ +    +++K D N   +   EG+    L   LS
Sbjct: 469  VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526

Query: 593  E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
            +            +++G S S           QV+ ++   + Y+K+  L+         
Sbjct: 527  QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582

Query: 631  ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
                 S F   A + +M+L +  L NLE+++N   G   G+L   L+HC T  GKRLLR 
Sbjct: 583  ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638

Query: 691  WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
            W+ RPL +   ++ R DA+  +   N     + R  L  +PD+ R L R           
Sbjct: 639  WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687

Query: 751  SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
                V Y  A   +L   +  L    L  +   ++G +     S  L++I      LP I
Sbjct: 688  ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVFR---SCLLNNI---PNTLPTI 735

Query: 811  VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
            +   + F +A +  +A  N+   +   P    D+     C  V E+E  L +HL E RK+
Sbjct: 736  LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793

Query: 867  LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
            L   ++ Y+T+    YL+EVP      VP  +   S+ +   RY TP I  +  E +Q  
Sbjct: 794  LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQHL 853

Query: 927  SEKESALKSILQRLIGQFCEHHNKWRQMVAAT---AELDALISLA--IASDFYEGPTCRP 981
             +     +        +  E+H    ++V  +   A +D L+SLA   A+  Y    C+P
Sbjct: 854  EKLSIVAREAFIAFQSEVAEYH----ELVVVSKQIAVIDCLMSLAQTAAASGY----CKP 905

Query: 982  VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
              +      EP +   +  HP++  + L +  +VP DI        + I+ TGPNM GKS
Sbjct: 906  KFV-----AEPELKILAGRHPMV--EMLREESYVPFDIHFSKEEGTTKII-TGPNMAGKS 957

Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
            + +R + L V +AQ+G+ VPA    +S  D +  RMGA D I  G+STF+ ELSET+ +L
Sbjct: 958  STVRAMALIVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDIL 1017

Query: 1102 SSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDY--KKD 1159
             + T  SLVVLDELGRGTST DG AIA + L H + ++ C  LF THY  +A D   +K 
Sbjct: 1018 QTITPRSLVVLDELGRGTSTYDGIAIAYATLSH-IAEIGCNTLFVTHYPTVAQDLAREKP 1076

Query: 1160 PRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKST 1219
             ++S  HM+        G  E+TFLY+L+ G    S+GV  ARLAG+P  +L  A  +S+
Sbjct: 1077 DKISNWHMSFDEIQMPDGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSS 1136

Query: 1220 EFEA 1223
              +A
Sbjct: 1137 SLKA 1140


>sp|P0CO93|MSH3_CRYNB DNA mismatch repair protein MSH3 OS=Cryptococcus neoformans var.
            neoformans serotype D (strain B-3501A) GN=MSH3 PE=3 SV=1
          Length = 1191

 Score =  290 bits (741), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 277/964 (28%), Positives = 437/964 (45%), Gaps = 137/964 (14%)

Query: 331  QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
            +KQ+ E K ++ D ++  ++G  Y+    DA   ++EL +           FP RNF   
Sbjct: 243  EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293

Query: 388  -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
                    ++V+KL   GY+V V+ QTET       +K   +++    R++  + T  T 
Sbjct: 294  SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349

Query: 441  TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
             E   L                   +A P  + L+A+ E     AS    +   +CVV  
Sbjct: 350  VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408

Query: 482  ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL------RHT-RNP 534
             T  I   +  D    + L   L+ L P E++ P   L+  TE+ +       +H  RN 
Sbjct: 409  GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLTKATEKVLTYFAGEPKHRGRNA 468

Query: 535  LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
            +  + +     +DA    L   N Y+ +    +++K D N   +   EG+    L   LS
Sbjct: 469  VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526

Query: 593  E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
            +            +++G S S           QV+ ++   + Y+K+  L+         
Sbjct: 527  QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582

Query: 631  ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
                 S F   A + +M+L +  L NLE+++N   G   G+L   L+HC T  GKRLLR 
Sbjct: 583  ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638

Query: 691  WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
            W+ RPL +   ++ R DA+  +   N     + R  L  +PD+ R L R           
Sbjct: 639  WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687

Query: 751  SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
                V Y  A   +L   +  L    L  +   ++G +     S  L++I      LP I
Sbjct: 688  ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVFR---SCLLNNI---PNTLPTI 735

Query: 811  VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
            +   + F +A +  +A  N+   +   P    D+     C  V E+E  L +HL E RK+
Sbjct: 736  LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793

Query: 867  LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
            L   ++ Y+T+    YL+EVP      VP  +   S+ +   RY TP I  +  E +Q  
Sbjct: 794  LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQHL 853

Query: 927  SEKESALKSILQRLIGQFCEHHNKWRQMVAAT---AELDALISLA--IASDFYEGPTCRP 981
             +     +        +  E+H    ++V  +   A +D L+SLA   A+  Y    C+P
Sbjct: 854  EKLSIVAREAFIAFQSEVAEYH----ELVVVSKQIAVIDCLMSLAQTAAASGY----CKP 905

Query: 982  VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
              +      EP +   +  HP++  + L +  +VP DI        + I+ TGPNM GKS
Sbjct: 906  KFV-----AEPELKILAGRHPMV--EMLREESYVPFDIHFSKEEGTTKII-TGPNMAGKS 957

Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
            + +R + L V +AQ+G+ VPA    +S  D +  RMGA D I  G+STF+ ELSET+ +L
Sbjct: 958  STVRAMALIVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDIL 1017

Query: 1102 SSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDY--KKD 1159
             + T  SLVVLDELGRGTST DG AIA + L H + ++ C  LF THY  +A D   +K 
Sbjct: 1018 QTITPRSLVVLDELGRGTSTYDGIAIAYATLSH-IAEIGCNTLFVTHYPTVAQDLAREKP 1076

Query: 1160 PRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKST 1219
             ++S  HM+        G  E+TFLY+L+ G    S+GV  ARLAG+P  +L  A  +S+
Sbjct: 1077 DKISNWHMSFDEIQMPDGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSS 1136

Query: 1220 EFEA 1223
              +A
Sbjct: 1137 SLKA 1140


>sp|Q8PWA7|MUTS_METMA DNA mismatch repair protein MutS OS=Methanosarcina mazei (strain ATCC
            BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
            GN=mutS PE=3 SV=1
          Length = 900

 Score =  290 bits (741), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 271/907 (29%), Positives = 417/907 (45%), Gaps = 116/907 (12%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PH 379
            ++   +Q++E K  + D +IFF+MG FYE F  DA   AKEL++          GE+ P 
Sbjct: 5    MTPAMRQYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDRSGERMPL 64

Query: 380  CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
             G P       + +L  KGY+V + EQ E P+Q             VVKR +  VVT GT
Sbjct: 65   AGIPYHAIDTYLPRLINKGYKVAICEQLEDPKQ----------AKGVVKRGVVRVVTPGT 114

Query: 440  LTEGELLSANPDAS--YLMALT--ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
              +  +    PDAS  YLMA+   E  ++  S   +  FG+  +D++T   +  Q  D  
Sbjct: 115  AIDSSMF---PDASNNYLMAVAGKEVGKTGKSGEKEMEFGLSFLDISTGEFLTTQFTDSG 171

Query: 496  DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
                L   L+ ++P E I P  +        + R     +V +  P            EI
Sbjct: 172  SFDKLLSELARMKPAECILPPTLYGNSV--LVDRLREQTIVQEFAP------------EI 217

Query: 556  KNIYNRITAESLNKADSNVANSQAEGDGLTCLP-GILSELISTGDSGSQVLSALGGTLFY 614
              I      E+  K   +   S  EG G   L  G+ S             SAL      
Sbjct: 218  SGI-----EEAGEKLKIHFRVSTLEGMGCEKLEFGVYS-----------AWSAL------ 255

Query: 615  LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
                +   T +R    +L   +     +   +MVLD+  L NLE+ +N R      +LY 
Sbjct: 256  ---EYAKTTQMR----DLAHINTLRTYSNTEFMVLDSVTLRNLEIVKNVRDEGDHNSLYR 308

Query: 675  QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
             L+   T  G R+L+ WL +PL +   I  R DAV  L G N     + R  LS + D+E
Sbjct: 309  TLSFTKTPMGSRILKKWLLKPLLSVEQINHRLDAVEELAG-NPLLRYDIRDWLSEVRDIE 367

Query: 735  RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
            RL+ R+   + AN R+          A K+  + + ++  C L       L  I E    
Sbjct: 368  RLVGRIVYGN-ANARDL--------VALKKSLDAVPSIRDCLLEKAGAEMLKGIAE---- 414

Query: 795  RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
                       GL +   I +  K   + +       +   G +   +     ++++I +
Sbjct: 415  -----------GLASFSEIEELAKMIGNAIVEEPPVSVREGGMIKSGFSEELDELRDISS 463

Query: 855  SLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRY 910
            +  + +   Q+K    T I  + IG +    Y +EV  +    VP DY  + +     R+
Sbjct: 464  NSKQWIAAFQQKEKDRTGIKSLKIGYNKVFGYYIEVTNANSSQVPDDYIRKQTMANAERF 523

Query: 911  WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
            +TP +K+    +  A  +  +    I   +      H  + ++       LD L  LA  
Sbjct: 524  FTPELKEKESLILTANDKAVALEYEIFTEITETLSAHSKELQETAERIGVLDVLADLAEV 583

Query: 971  SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
            ++       RP + + C      I  +   HPV+  +S   G FVPND  +    N  F+
Sbjct: 584  AE--NNNYTRPQLTEDCK-----ILIRDGRHPVV--ESTVSGGFVPNDTEMDCKEN-QFL 633

Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
            L+TGPNM GKST +RQ  L  I+AQ G+ VPA    I  +D++F R+GA D + +GQSTF
Sbjct: 634  LVTGPNMAGKSTYMRQTALIAIMAQAGSFVPASYASIGVIDQVFTRIGAFDDLASGQSTF 693

Query: 1091 LTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVH---KVQCRGLFST 1147
            + E+ E A +L++A+  SLV+LDE+GRGTST DG +IA++V+E F+H   KV  R LF+T
Sbjct: 694  MVEMVELANILNNASPKSLVLLDEIGRGTSTYDGYSIAKAVVE-FLHNRGKVGIRALFAT 752

Query: 1148 HYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIP 1207
            HYH+L    +K  RV   H+A +         E+ FL ++ PGA  +SYG++VARLAG+P
Sbjct: 753  HYHQLTSLEEKLKRVKNYHIAVKEEG-----HELVFLRKIVPGATDRSYGIHVARLAGVP 807

Query: 1208 DKVLQKA 1214
            +KV+++A
Sbjct: 808  EKVIERA 814


>sp|A0LG76|MUTS_SYNFM DNA mismatch repair protein MutS OS=Syntrophobacter fumaroxidans
            (strain DSM 10017 / MPOB) GN=mutS PE=3 SV=1
          Length = 889

 Score =  290 bits (741), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 261/902 (28%), Positives = 413/902 (45%), Gaps = 132/902 (14%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+ E K K+ D ++ ++MG FYE+F  DA   +  L++     ++      P CG P  
Sbjct: 9    QQYLEIKEKYPDALLLYRMGDFYEMFMDDAVTASGLLEIALTSRDRQSEVRIPMCGVPYH 68

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + +L   G +V + +Q E P      RK KG    +V+RE+  V+T G + + + 
Sbjct: 69   AAEGYIARLVSAGKKVAICDQVEDP------RKAKG----LVRREVTRVITPGLVLDAQN 118

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L+A    +YL A++ S       +    FG+  +DV+T+                     
Sbjct: 119  LAAK-QPNYLAAVSNS-------TAGERFGLAFLDVSTA--------------------- 149

Query: 506  ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN-RITA 564
            E + VEI     +L    E  I    R  L++D        D      E+  +Y   +T 
Sbjct: 150  EFKMVEIESREALL----EELIRVSPRELLLSD-------DDEHPWAEELPKLYGIALTP 198

Query: 565  ESLNKADSNVANSQAEGD-GLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLD- 621
               ++ D   A     G   +  L G        G SG  + + A G  L Y++ + L  
Sbjct: 199  LGADRFDGKRAEEALVGHFRVHSLEGF-------GISGMDLGIRAAGAILAYMQANLLGS 251

Query: 622  -ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
             + + R     LLP S      +  +M++D   + NLE+F +       G+L   L+   
Sbjct: 252  CDHITR-----LLPYS------RGDFMIVDEAGVRNLEIFHSQSFQGRKGSLIDILDETK 300

Query: 681  TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
            TA G R L+ WL  PL +   I  R++A+A L   N P   E    LSR+ D+ERL    
Sbjct: 301  TAMGGRKLQQWLRYPLLDLARINNRREAIAEL-AANAPMRGETLGLLSRISDVERL---- 355

Query: 741  FASSEANGRNSNKVVLYED--AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
                  NGRNS       D  A KK LQ                 +LGA L    S +L 
Sbjct: 356  ------NGRNSTGTSTPRDLVALKKSLQNL--------------PALGAALAELTSPRLS 395

Query: 799  HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
             +      L  +  I++  +   D      +   +   GV  + D   +  ++ +  +  
Sbjct: 396  ELRARWDDLADVADIIE--RTLLDPPPPGLAAGGVISAGVSEELDHFVRLSRDAKGWMAD 453

Query: 859  HLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
            +  +QR+   DT I+ + +  +    Y +E+  +   SVP  Y  + +     R+ T  +
Sbjct: 454  YEVQQRR---DTGISSLKVRYNKVFGYYIEISNANLNSVPEHYFRKQTLVNAERFITEEL 510

Query: 916  KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
            K    ++ QAE ++    + I   L  +      + +      A+LD + +LA  +  Y+
Sbjct: 511  KTFETQVLQAEEKRLELEQQIFADLRARIAREAGRIQAAADRIADLDCVSALAEVACRYD 570

Query: 976  GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
               CRPV+     +E   I  +   HPV+    L  G FVPND+ +    +   +++TGP
Sbjct: 571  --YCRPVM-----DESDAIRIRDGRHPVI-EHYLKDGTFVPNDLDMD-QRDQQVLVITGP 621

Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
            NM GKST+LRQ  L V++  +G+ VPA    I  VDRIF R+GA D +  G+STF+ E+ 
Sbjct: 622  NMAGKSTILRQAALIVLMGHIGSFVPASEAHIGLVDRIFTRVGASDDLARGRSTFMVEMQ 681

Query: 1096 ETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRG---LFSTHYHRL 1152
            ETA +L  AT  SL++LDE+GRGTST DG +IA +V EH +H  Q +G   LF+THYH L
Sbjct: 682  ETANILHHATPRSLIILDEIGRGTSTYDGLSIAWAVAEH-LHDFQEKGIKTLFATHYHEL 740

Query: 1153 AVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQ 1212
                +  PRV   ++A +        +E+ F ++L  G   +SYG+ VARLAG+P++V  
Sbjct: 741  TELARSRPRVRNFNVAIREWQ-----QEILFFHKLVQGGASRSYGIQVARLAGLPEEVTG 795

Query: 1213 KA 1214
            +A
Sbjct: 796  RA 797


>sp|C3KCT2|MUTS_PSEFS DNA mismatch repair protein MutS OS=Pseudomonas fluorescens (strain
            SBW25) GN=mutS PE=3 SV=1
          Length = 863

 Score =  289 bits (740), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 262/921 (28%), Positives = 416/921 (45%), Gaps = 153/921 (16%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W  K++H D+++F++MG FYE+F  DA   AK LD+      Q      P CG P  
Sbjct: 16   QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
            +    + KL + G  V++ EQ   P         KG     V+R++  ++T GT+++  L
Sbjct: 76   SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ V+D+ +       V++      L   L 
Sbjct: 126  LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             + PVE++ P +    L  E  R   R  R P           WD E     +K++  + 
Sbjct: 173  RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218

Query: 563  TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
            + + L               G  CL G   E   T              L  L+   LD+
Sbjct: 219  SVQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 266

Query: 623  TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
            T                       +VLD  +  NLE  + + +G    TL + ++ C TA
Sbjct: 267  T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 302

Query: 683  FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
             G RLL  WL RPL +  +++ RQ ++  L  ++     + +  L  + D+ER+LAR   
Sbjct: 303  MGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILAR--- 357

Query: 743  SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
                        +   +A  + L     AL     +  A + L       ++  L  +  
Sbjct: 358  ------------IGLRNARPRDLARLRDALGALPQLQVAMTEL-------DTPHLQQLAV 398

Query: 803  PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
                 P + ++L+  K   D     N   II  GGV    YDS   +++ +  +  + L 
Sbjct: 399  TAGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFLI 451

Query: 861  -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
                 ++ R  L +  + Y  +    Y +E+P     S P DY+ R + KG  R+ TP +
Sbjct: 452  DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPEL 509

Query: 916  K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
            K    K L   S+A + ++   +++L+ LI Q     +      AA AELD L +LA   
Sbjct: 510  KAFEDKALSAKSRALAREKMLYEALLEDLISQLAPLQDT----AAALAELDVLSNLA--- 562

Query: 972  DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
                    R + LD +C     EP +      HPV+  + +    FV ND+++    +  
Sbjct: 563  -------ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSL--DDDTR 611

Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
             +++TGPNMGGKST +RQ  L V+LA +G+ VPA   E+S VDRIF R+G+ D +  G+S
Sbjct: 612  MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671

Query: 1089 TFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTH 1148
            TF+ E+SETA +L +AT  SLV++DE+GRGTST DG ++A +  E   H ++   LF+TH
Sbjct: 672  TFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH-LRAYTLFATH 730

Query: 1149 YHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPD 1208
            Y  L V  + +P V+  H+     N     E + FL+ + PG   +SYG+ VA+LAG+P+
Sbjct: 731  YFELTVLPESEPLVTNVHL-----NATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPN 785

Query: 1209 KVLQKAVAKSTEFEAIYGKHK 1229
             V+ +A    +  E     H+
Sbjct: 786  DVITRAREHLSRLETTALPHE 806


>sp|A9KL10|MUTS_CLOPH DNA mismatch repair protein MutS OS=Clostridium phytofermentans
            (strain ATCC 700394 / DSM 18823 / ISDg) GN=mutS PE=3 SV=1
          Length = 932

 Score =  288 bits (737), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 264/913 (28%), Positives = 413/913 (45%), Gaps = 138/913 (15%)

Query: 324  LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
            +  L+   +Q+ E K ++ D ++F+++G FYE+F  DA V +KEL++  + G+       
Sbjct: 1    MAQLTPMMQQYVETKEQYKDCILFYRLGDFYEMFFEDALVASKELEIT-LTGKNCGQEER 59

Query: 378  -PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
             P CG P       + KL  KGY+V + EQ E P      +  KG    +VKRE+  +VT
Sbjct: 60   APMCGIPYHAAEGYISKLIGKGYKVAICEQVEDP------KLAKG----IVKREVIRIVT 109

Query: 437  KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
             GT    + L    + +YLM +           TD   GI  VD+ T    + +V     
Sbjct: 110  PGTNLNTQTLDETRN-NYLMGII---------FTDEHCGISTVDITTGDYYVTEV----- 154

Query: 497  CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
                                     E  R IL        +++V   EF+     V ++K
Sbjct: 155  -------------------------ENNRKILDEIYKYTPSEIVCNPEFFHCGLDVEDLK 189

Query: 557  NIYNRI--TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
            N Y     T E           +  E   +  L G+  +  S G      ++A G  L Y
Sbjct: 190  NRYQIAVSTFEDWYYDSEQSVKTLKEHFKVGSLDGLGLKDYSVG------VNAAGAILKY 243

Query: 615  LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
            L  +          K  L   +         YMV+D+ +  NLE+ E  R     G+L  
Sbjct: 244  LYNT---------QKNSLSHLTHITPYVTSRYMVIDSSSRRNLELTETLREKQKRGSLLW 294

Query: 675  QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
             L+   TA G R+LR+++ +PL     I  R DA++ L   N     E R+ L+ + D+E
Sbjct: 295  VLDKTKTAMGARMLRSFVEQPLITMDEISARYDAISELND-NVITREEIREYLNYIYDLE 353

Query: 735  RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAI--LE 790
            RL+ ++   S AN R+    ++   ++   L      L  CE  L+ Q    + A+  L+
Sbjct: 354  RLMGKISYKS-ANPRD----LIAFASSLSMLPHIKYLLSTCESALLKQIHEEMDALDDLQ 408

Query: 791  NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSGRIIPHGGVDMDYDSACKKV 849
            N   R +     P  G+     I + F    D + +A   G++            A  + 
Sbjct: 409  NLIDRSIAE--EPPIGIKEGGIIKEGFHTEVDTLRKAKTEGKVWL----------AELEA 456

Query: 850  KEIEASLTKHLK-EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
            KE E +  K+LK +  ++ G             Y LEV  S    VP ++  + +     
Sbjct: 457  KEKEQTGIKNLKVKYNRVFG-------------YYLEVTNSYANLVPENWIRKQTLSNAE 503

Query: 909  RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
            RY TP +K+L  ++  AE    S    +   +  Q  E   + ++   A A +DA  SLA
Sbjct: 504  RYTTPELKELEDKILNAEDRLFSLEYDLFAEIRDQIAEEVKRIQKTAKAVANIDAFASLA 563

Query: 969  IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG----- 1023
              ++       RP +     N    I  K   HPV+        + +PND+ +       
Sbjct: 564  YVAE--RNQFIRPEL-----NTNGTIDIKEGRHPVVE-------QMIPNDMFVSNDTYLD 609

Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
            +      ++TGPNM GKST +RQ  L V++AQVG+ VPA    I  VDRIF R+GA D +
Sbjct: 610  NAEKRISIITGPNMAGKSTYMRQTALIVLMAQVGSFVPASYANIGIVDRIFTRVGASDDL 669

Query: 1084 MAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHK--VQC 1141
             +GQSTF+ E++E A +L +AT+NSL++LDE+GRGTST DG +IA +V+EH  +   +  
Sbjct: 670  ASGQSTFMVEMTEVANILRNATKNSLLILDEIGRGTSTFDGLSIAWAVIEHISNTSMLGA 729

Query: 1142 RGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVA 1201
            + LF+THYH L    + + ++S  +  C      G  E++ FL ++  G   KSYG+ VA
Sbjct: 730  KTLFATHYHELT---ELEGKISGVNNYCIAVKEQG--EDIVFLRKIIGGGADKSYGIQVA 784

Query: 1202 RLAGIPDKVLQKA 1214
            +LAG+P+ VL +A
Sbjct: 785  KLAGVPNSVLVRA 797


>sp|P27345|MUTS_AZOVI DNA mismatch repair protein MutS OS=Azotobacter vinelandii GN=mutS
            PE=3 SV=1
          Length = 855

 Score =  288 bits (737), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 270/927 (29%), Positives = 418/927 (45%), Gaps = 165/927 (17%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W+ K +H D+++F++MG FYELF  DA   AK LD+      Q      P  G P  
Sbjct: 12   QQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFH 71

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
            +    + KL + G  V + EQ   P           +    V+R++  ++T GT+++  L
Sbjct: 72   SVEGYLAKLVKLGESVAICEQIGDP----------ATTKGPVERQVVRIITPGTVSDEAL 121

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ ++D+ + R  + ++        L   L 
Sbjct: 122  LDERRD----------NLLAAVVGDERLFGLAILDITSGRFNVQEIQG---WENLLAELE 168

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             L P E++ P +    L  E  R    H R P           WD      +  + Y  +
Sbjct: 169  RLNPAELLYPDDWPAGLPLEKRRGA--HRRAP-----------WD-----FDFDSAYKSL 210

Query: 563  TAESLNKADSNVANSQAEG---DGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKS 618
              +         A    +G   DGL    G    L++   ++    L  L G    L+  
Sbjct: 211  CQQ--------FATQDLKGFGCDGLGLAIGAAGCLLAYARETQRTALPHLRG----LRHE 258

Query: 619  FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
             LD+T                       ++L   +  NLE+  N  SG    TL + ++ 
Sbjct: 259  RLDDT-----------------------VILAGASRRNLELDVNL-SGGRDNTLQSVIDR 294

Query: 679  CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLL 737
            C TA G RLL  WL RPL +  ++  RQD VA L    Q +  E  +  L  + D+ER+L
Sbjct: 295  CQTAMGSRLLGRWLNRPLRDRAVLEARQDTVACLL---QDYRFESLQPQLKEIGDVERIL 351

Query: 738  ARLFASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
            AR+      N R  +   L +  AA  QLQ  +S L    L  QA +  G I        
Sbjct: 352  ARI---GLRNARPRDLARLRDALAALPQLQTALSPLEAPHL--QALA--GNI-------- 396

Query: 797  LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEAS 855
                    +  P +  +L+           +N   +I  GGV    YD+   ++  +  +
Sbjct: 397  --------RTYPELAELLRR-------AIIDNPPAVIRDGGVLKQGYDAELDELLSLSEN 441

Query: 856  LTKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
              + L      ++ R  L +  + Y  I    Y +E+P       P DY  R + KG  R
Sbjct: 442  AGQFLMDLEAREKARTGLPNLKVGYNRIHG--YYIELPRVQAEQAPADYIRRQTLKGAER 499

Query: 910  YWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
            + TP +K    K L   S+A + +++  + +L+ LI Q        ++   A AELD L 
Sbjct: 500  FITPELKAFEDKALSAKSRALAREKALYEELLEILIAQLA----PLQETATALAELDVLA 555

Query: 966  SLA---IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
            +LA   +  DF      RP  +     EEP +  +   HPV+  + +    FV ND+ + 
Sbjct: 556  NLAERALNLDF-----NRPRFV-----EEPCLRIRQGRHPVV--EQVLDTPFVANDLEL- 602

Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
               N   +++TGPNMGGKST +RQ  L V+LA +G+ VPA+  E+S VDRIF R+G+ D 
Sbjct: 603  -DDNTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAQSCELSLVDRIFTRIGSSDD 661

Query: 1083 IMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCR 1142
            +  G+STF+ E+SETA +L +A+  SLV++DE+GRGTST DG ++A +  EH    ++  
Sbjct: 662  LAGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWAAAEHLA-GLRAW 720

Query: 1143 GLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVAR 1202
             LF+THY  L V  +  P V+  H++    N     E + FL+ + PG   +SYG+ VA+
Sbjct: 721  TLFATHYFELTVLAESQPVVANVHLSATEHN-----ERIVFLHHVLPGPASQSYGLAVAQ 775

Query: 1203 LAGIPDKVLQKAVAKSTEFEAIYGKHK 1229
            LAG+P  V+ +A       EA    H+
Sbjct: 776  LAGVPGPVISRAREHLARLEATSLPHE 802


>sp|Q8KCC0|MUTS_CHLTE DNA mismatch repair protein MutS OS=Chlorobium tepidum (strain ATCC
            49652 / DSM 12025 / TLS) GN=mutS PE=3 SV=1
          Length = 878

 Score =  288 bits (736), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 269/914 (29%), Positives = 417/914 (45%), Gaps = 124/914 (13%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
            +Q+ E K ++   ++ F++G FYE F  DA   +  L++   +      GE P  GFP  
Sbjct: 17   RQYLEVKERYPGYLLLFRVGDFYETFLDDAVTVSSALNIVLTRRSNGGAGEIPLAGFPHH 76

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL  KG++V V +Q E P         KG    +VKREI  +VT G     ++
Sbjct: 77   ASEGYIAKLVTKGFKVAVCDQVEDPAL------AKG----IVKREITDIVTPGITYSDKI 126

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    + +YL A+     +P  +  +   G+  VDV T+       M +L    L   L 
Sbjct: 127  LDDRHN-NYLCAV-----APVKRGREHMAGVAFVDVTTAEF----RMTELPLGELKDFLQ 176

Query: 506  ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
             LRP EI               L  +R+  + + +  S F  A  T L+         A 
Sbjct: 177  SLRPSEI---------------LISSRDKELRESLAKSLFSGALFTTLDEWMFTEEQAAR 221

Query: 566  SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
             L   +++      +G G+    G  +  I+ G     +  A  G+L YL +        
Sbjct: 222  VL---ENHFKTHSLKGFGI---EGYEAGRIAAGVILQYLEEAKQGSLKYLVR-------- 267

Query: 626  RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
                         G +     M LD     NLE+  + + G  +G+L   ++      G 
Sbjct: 268  ------------IGLVESGETMTLDIQTCRNLEIISSMQDGSLNGSLLEVIDRTKNPMGA 315

Query: 686  RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
            RLLR WL  PL     +  R DAV  L  ++ P   E  R  L  + D+ER LAR+  S 
Sbjct: 316  RLLRRWLLHPLRKLEPVVRRHDAVGEL--LDAPEMREGIRGMLGGIIDLERALARIATSR 373

Query: 745  EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
                           A  +++++  S+L            L ++LE ++S +L  +    
Sbjct: 374  ---------------AMPREVRQLGSSL-------AMIPQLKSLLEGSKSLRLRELALRL 411

Query: 805  KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-Q 863
              LP +   ++   DA        SG +   G +   Y +   +++ I +     L E Q
Sbjct: 412  DPLPELAETIEKALDA------EASGTLRDGGYIRAGYHAELDELRAISSGARDRLLEIQ 465

Query: 864  RKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
            ++    TSI+ + +  +    Y +EV  +    VP  YE + +     RY  P +K+   
Sbjct: 466  QQERQRTSISTLKVQYNKVFGYYIEVSRANSDKVPEYYEKKQTLVNAERYTIPALKEYEE 525

Query: 921  ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
            ++  AE + +     + Q L     E     +   AA AELD L   A  +D  E   CR
Sbjct: 526  KILTAEEKSQLLEHQLFQELCAMIAEQAASIQTTAAALAELDCLACFASCAD--EFGYCR 583

Query: 981  PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNASFILLTGPNMGG 1039
            PV+     NE   +S ++  HPVL    LG  E +V ND  +G       +++TGPNM G
Sbjct: 584  PVM-----NEGTELSIRAGRHPVLER-ILGADEPYVANDCQVGSE--QQLLIITGPNMAG 635

Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
            KS+ LRQV L V+LAQVG  VPAE  EI  VDRIF R+GA D++ +G+STFL E++E A 
Sbjct: 636  KSSYLRQVGLVVLLAQVGCFVPAESAEIGLVDRIFTRVGASDNLTSGESTFLVEMNEAAS 695

Query: 1100 MLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDYKKD 1159
            +L++AT  SL++LDE+GRGTST DG +IA S+ E+   +++ R LF+THYH LA    + 
Sbjct: 696  ILNNATERSLLLLDEIGRGTSTFDGMSIAWSMCEYIHDQLRSRTLFATHYHELAELESRF 755

Query: 1160 PRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVAKST 1219
             R+   +        V   + V FL ++  GA   SYG+ VA++AG+P +V+++A     
Sbjct: 756  ERIVNFNATV-----VETADTVIFLRKIVRGASDNSYGIEVAKMAGMPPEVIERA----- 805

Query: 1220 EFEAIYGKHKKESE 1233
              E + G  ++E E
Sbjct: 806  -REILAGMERREVE 818


>sp|A7TTQ1|MSH3_VANPO DNA mismatch repair protein MSH3 OS=Vanderwaltozyma polyspora (strain
            ATCC 22028 / DSM 70294) GN=MSH3 PE=3 SV=1
          Length = 1023

 Score =  287 bits (735), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 269/948 (28%), Positives = 437/948 (46%), Gaps = 137/948 (14%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---------------E 376
            +Q  + K  HMDK++  ++G  Y+ F  DA + +K L +  + G               +
Sbjct: 140  QQVKDLKLLHMDKILVIRVGYKYKCFAQDAEIVSKILHIMLIPGKLTIDESNPQDSNYRQ 199

Query: 377  QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
              +C FP+    +++E L     +V VVEQ+ET      +     SK+ V +R+I  V T
Sbjct: 200  FAYCSFPDIRLKVHLETLVHNNLKVAVVEQSETSAIK--KNSNASSKNSVFERKISGVYT 257

Query: 437  KGTLTEGELLSANP-------DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
            K T       S+N        ++ +++  +E ++  +S      F +  V++ +  II  
Sbjct: 258  KATFGINSAFSSNRKNVLGQYNSIWIINFSEIDKINSS------FFMISVNLNSGEII-- 309

Query: 490  QVMDDLDCSV-----LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
               D  +CS      L   +  L P+E++  + +  PE  +  L  +     N  + L E
Sbjct: 310  --YDTFECSTTSIENLETRIKYLNPIEVLTVSAL--PEKVKLRLHGS-----NSTILLKE 360

Query: 545  FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
              D +  ++E            +NK+                         + G + S  
Sbjct: 361  KEDIDKEIME-----------EINKS-------------------------TKGLNLSAE 384

Query: 605  LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
            L  L   L+     + +E LL       L    +   A K +MVL+A A+E+L +F    
Sbjct: 385  LFELVPVLYKYLTEYNNEELL-------LISENYKPFASKKHMVLNAAAIESLGIF--GE 435

Query: 665  SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV-AGLRGVNQPFALEF 723
             G   G+L+  L+H  T+FG R LR W+  PL +   I +R DAV   +  V+  F    
Sbjct: 436  EG-GKGSLFWLLDHTRTSFGSRKLREWILHPLLDKKEIEDRLDAVDCIIHEVSNIFFESL 494

Query: 724  RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS--ALHGCELMDQA 781
             K L+ +PD+ R + R+     A G  S K + Y     KQ++ F     LH   L  Q 
Sbjct: 495  NKMLTNVPDLLRTINRI-----AYGTTSRKEIYY---FLKQMKSFSDHFQLHSNYLNSQV 546

Query: 782  CSSLGAILENTESRQLHHILTP-GKGLPAI-VSILKHFKDAFDWVEANNSGRIIPHGGVD 839
             S+ G I  +  S  L ++LT    GL  I +  +    +    +E +   ++     ++
Sbjct: 547  VSNDGRI--HKSSALLTNLLTEITSGLKEINIENILSMINVSSVMEKDTYKQVSEFFNLN 604

Query: 840  MDYDSACKKVK------EIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLLEVPESLR 891
              YD A + +K      E++  L + L   RK+L    + Y    KD   YL+EV  +  
Sbjct: 605  Y-YDHAEEIIKIQGNINEVKNELAEELSSIRKILKRPHLNY----KDEMDYLIEVRNTQT 659

Query: 892  GSVPRDYELRSSKKGFFRYWTPNIKKLLGELS-QAESEKESALKSILQRLIGQFCEHHNK 950
              +P D+ + +  K   RY TP  +KL+ +L  Q +   +   K   Q  + +    +  
Sbjct: 660  KGLPSDWIVVNRTKMISRYHTPTSRKLIEKLQYQKDILYQETQKEYFQ-FVKRIKNDYFA 718

Query: 951  WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
              +++   A  D +  LA+AS        RPV+ D    E  +I AK+  +P++ S  + 
Sbjct: 719  LNKIINHIATYDCI--LALASTSQNMNYVRPVLTD----ESQFIDAKNARNPIIESLDIN 772

Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
               +VPND+ +  H    F+++TGPNMGGKS+ +RQV L VILAQVG+ VPA+  + S  
Sbjct: 773  ---YVPNDVNLS-HSAGKFLIITGPNMGGKSSYIRQVALLVILAQVGSYVPADFMKTSIF 828

Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAES 1130
            D+I  R+GA D+++ GQSTF  EL E   ++ + T NSL++LDE+GRGTST DG+AI+ S
Sbjct: 829  DKILTRIGAYDNLLKGQSTFKVELLEIQNIIKNKTENSLLLLDEVGRGTSTEDGKAISYS 888

Query: 1131 VLEHFVHKVQC-RGLFSTHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSP 1189
            ++++F++   C   LF+THY  L     K  +        Q   G      + FLY+L  
Sbjct: 889  IVDYFINLPVCPLVLFTTHYPFLGSINSKILKSYYMDFVEQKKEGEDW-PSIVFLYKLRS 947

Query: 1190 GACPKSYGVNVARLAGIPDKVLQKAVAKSTEFEAIYGKHKKESEENLP 1237
            G    S+G+NVARLA I   ++  A + S   E I  + +  +  NLP
Sbjct: 948  GITDSSFGLNVARLAQIDKDIINHAFSIS---EKIRQETETANTMNLP 992


>sp|Q4ZWP5|MUTS_PSEU2 DNA mismatch repair protein MutS OS=Pseudomonas syringae pv. syringae
            (strain B728a) GN=mutS PE=3 SV=1
          Length = 859

 Score =  287 bits (735), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 263/924 (28%), Positives = 416/924 (45%), Gaps = 157/924 (16%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W+ K++H+D+++F++MG FYE+F  DA   AK LD+      Q      P CG P  
Sbjct: 16   QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL + G  V++ EQ   P         KG  D    R++  ++T GT+++  L
Sbjct: 76   AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ V+D+ +       V++      L   L 
Sbjct: 126  LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             + PVE++ P +    L  E  R   R  R P           WD E      K++  + 
Sbjct: 173  RINPVELLIPDDWPPGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218

Query: 563  TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
              + L               G  C            ++ +  + A G  L Y K++    
Sbjct: 219  ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252

Query: 623  T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
               LR  + E L  +   D A +           NLE+ + + SG    TL + ++ C T
Sbjct: 253  LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301

Query: 682  AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
            A G RLL  WL RPL +  +++ RQ ++       + +  E  +  L  + D+ER+LAR 
Sbjct: 302  AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357

Query: 741  FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
                          +   +A  + L     AL     + QA S L A         L  +
Sbjct: 358  --------------IGLRNARPRDLARLRDALSALPELQQAMSDLDA-------PHLQQL 396

Query: 801  LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
                   P +  +L+           +N   +I  GGV    YD+    ++ +  +  + 
Sbjct: 397  AQTAGTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449

Query: 860  L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
            L      ++ R  LG+  + Y  +    Y +E+P       P DY  R + KG  R+ TP
Sbjct: 450  LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507

Query: 914  NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
             +K    K L   S+A + ++   +++L+ LIG    H    +   AA AELD L +LA 
Sbjct: 508  ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562

Query: 970  ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
                      R + LD +C     EP +  +   HPV+  + +    FV ND+ +    +
Sbjct: 563  ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609

Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
               +++TGPNMGGKST +RQ  L V+LA +G+ VPA   E+S VDRIF R+G+ D +  G
Sbjct: 610  TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669

Query: 1087 QSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFS 1146
            +STF+ E+SETA +L +AT  SLV++DE+GRGTST DG ++A +  E    +++   LF+
Sbjct: 670  RSTFMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLA-QLRAYTLFA 728

Query: 1147 THYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGI 1206
            THY  L V  + +P V+  H+     N     E + FL+R+ PG   +SYG+ VA+LAG+
Sbjct: 729  THYFELTVLPESEPLVTNVHL-----NATEHNERIVFLHRVLPGPASQSYGLAVAQLAGV 783

Query: 1207 PDKVLQKAVAKSTEFEAIYGKHKK 1230
            P KV+ +A       E     H++
Sbjct: 784  PGKVISRAKEHLQRLETTSLPHEQ 807


>sp|Q3KH79|MUTS_PSEPF DNA mismatch repair protein MutS OS=Pseudomonas fluorescens (strain
            Pf0-1) GN=mutS PE=3 SV=1
          Length = 860

 Score =  287 bits (734), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 263/907 (28%), Positives = 422/907 (46%), Gaps = 155/907 (17%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W  K++H D+++F++MG FYE+F  DA   AK LD+      Q      P CG P  
Sbjct: 16   QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL + G  V++ EQ   P         KG     V+R++  ++T GT+++  L
Sbjct: 76   AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ V+D+ +       V++      L   L 
Sbjct: 126  LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             + PVE++ P +    L  E  R + R  R P           WD E     +K++  + 
Sbjct: 173  RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218

Query: 563  TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
            + + L               G  C            ++ +  + A G  L Y K++    
Sbjct: 219  STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252

Query: 623  T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
               LR  + E L  +          +VLD  +  NLE+ + + +G    TL + ++ C T
Sbjct: 253  LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301

Query: 682  AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
            A G RLL  WL RPL +  ++  RQ ++  L  +++      +  L  + D+ER+LAR+ 
Sbjct: 302  AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFENLQPQLKEIGDIERILARI- 358

Query: 742  ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
                   RN+       D A+  L++ + AL            L   + + E+  L  + 
Sbjct: 359  -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQRLA 397

Query: 802  TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
            T     P + ++L+  K   D     N   +I  GGV    YDS   +++ +  +  + L
Sbjct: 398  TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450

Query: 861  ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
                  ++ R  L +  + Y  I    Y +E+P     S P DY  R + KG  R+ TP 
Sbjct: 451  IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508

Query: 915  IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
            +K    K L   S+A + ++   +++L+ LI Q        +    A AELD L +LA  
Sbjct: 509  LKEFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562

Query: 971  SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
                     R + LD +C     EP +      HPV+  + +    FV ND+++    N 
Sbjct: 563  --------ERALNLDLNCPTFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNT 610

Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
              +++TGPNMGGKST +RQ  L V+LA +G+ VPA   E+S VDRIF R+G+ D +  G+
Sbjct: 611  RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670

Query: 1088 STFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFST 1147
            STF+ E+SETA +L +AT  SLV++DE+GRGTST DG ++A +  E    +++   LF+T
Sbjct: 671  STFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLA-QLRAYTLFAT 729

Query: 1148 HYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIP 1207
            HY  L V  + +P V+  H+     N     E + FL+ + PG   +SYG+ VA+LAG+P
Sbjct: 730  HYFELTVLPEAEPLVANVHL-----NATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP 784

Query: 1208 DKVLQKA 1214
             +V+ +A
Sbjct: 785  SEVIVRA 791


>sp|Q4KHE3|MUTS_PSEF5 DNA mismatch repair protein MutS OS=Pseudomonas fluorescens (strain
            Pf-5 / ATCC BAA-477) GN=mutS PE=3 SV=1
          Length = 859

 Score =  287 bits (734), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 262/920 (28%), Positives = 415/920 (45%), Gaps = 151/920 (16%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+W  K++H D+++F++MG FYE+F  DA   AK LD+      Q      P CG P  
Sbjct: 16   QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL + G  V++ EQ   P         KG     V+R++  ++T GT+++  L
Sbjct: 76   AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    D          N   A    +R FG+ V+D+ +       V++      L   L 
Sbjct: 126  LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172

Query: 506  ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
             + PVE++ P +    L  E  R + R  R P           WD E      K++  + 
Sbjct: 173  RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 218

Query: 563  TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
            + + L               G  C            ++ +  + A G  L Y K++    
Sbjct: 219  STQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252

Query: 623  T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
               LR  + E L  +          +VLD  +  NLE+ + + +G    TL + ++ C T
Sbjct: 253  LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301

Query: 682  AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
            A G RLL  WL RPL +  ++  RQ ++  L      +  E  +  L  + D+ER+LAR+
Sbjct: 302  AMGSRLLTRWLNRPLRDLKVLEARQSSITCLL---DGYRFERLQPQLKEIGDIERILARI 358

Query: 741  FASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
                  N R  +   L +  AA  +LQE ++ L                    E+  L+ 
Sbjct: 359  ---GLRNARPRDLARLRDALAALPELQEAMTEL--------------------EATHLNQ 395

Query: 800  ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTK 858
            +       P + ++L   K   D     N   +I  GGV    YD+   +++ +  +  +
Sbjct: 396  LAATTSTYPELAALLA--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQ 448

Query: 859  HL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
             L      ++ R  L +  + Y  I    Y +E+P       P DY  R + KG  R+ T
Sbjct: 449  FLIDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFIT 506

Query: 913  PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
            P +K+   +   A+S   +  K +   L+     H    +    A AELD L +LA    
Sbjct: 507  PELKEFEDKALSAKSRALAREKMLYDALLETLISHLPPLQDTAGALAELDVLSNLA---- 562

Query: 973  FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
                   R + LD +C     EP +      HPV+  + +    FV ND+++    N   
Sbjct: 563  ------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSLDD--NTRM 612

Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
            +++TGPNMGGKST +RQ  L V+LA +G+ VPA   E+S VDRIF R+G+ D +  G+ST
Sbjct: 613  LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672

Query: 1090 FLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHY 1149
            F+ E+SETA +L +AT  SLV++DE+GRGTST DG ++A +  E   H ++   LF+THY
Sbjct: 673  FMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH-LRAYTLFATHY 731

Query: 1150 HRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDK 1209
              L V  + +P V+  H+     N     E + FL+ + PG   +SYG+ VA+LAG+P  
Sbjct: 732  FELTVLPESEPLVANVHL-----NATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSA 786

Query: 1210 VLQKAVAKSTEFEAIYGKHK 1229
            V+ +A    +  E     H+
Sbjct: 787  VITRAREHLSRLETTSLPHE 806


>sp|Q83CQ2|MUTS_COXBU DNA mismatch repair protein MutS OS=Coxiella burnetii (strain RSA 493
            / Nine Mile phase I) GN=mutS PE=3 SV=1
          Length = 859

 Score =  286 bits (731), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 255/930 (27%), Positives = 424/930 (45%), Gaps = 142/930 (15%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
            +Q+   K+++ D ++F++MG FYELF  DA   AK L++      Q      P  G P  
Sbjct: 22   RQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARGQSAGHAIPMAGVPYH 81

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL R G  V++ EQ   P         KG     V RE+  ++T GT+++  L
Sbjct: 82   AVENYLTKLVRLGESVVICEQIGDPA------TSKGP----VAREVTRIITPGTVSDEAL 131

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L  + D + ++           Q  DR FGI  +D+ + R ++ +++ +        L +
Sbjct: 132  LDEHRDNTLMVI---------HQEKDR-FGIATLDITSGRFLIQEIISE------NALFA 175

Query: 506  ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
            E   +E I+PA +L  E       ++ +PL  D +     W+ +              A 
Sbjct: 176  E---IERIRPAELLISE------ENSVHPLKADSIKRRPPWEFDH-------------AT 213

Query: 566  SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
            +L            +G G+T LP                ++A G  L Y+  +       
Sbjct: 214  ALTLLCQQFQTKSLDGFGITHLP--------------LAITAAGCLLQYVNYT------- 252

Query: 626  RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
               K  L           +  + +DA    NLE+  N + G+   +L   L+H  T  G 
Sbjct: 253  --QKSALPHIHSIQAEQNEEALFIDANTRRNLELITNLQ-GEEVHSLAWLLDHTATPMGS 309

Query: 686  RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
            RLLR W+ RPL +  L+++RQ+AV+ L  + +    E  + L  + D+ER++AR+   S 
Sbjct: 310  RLLRRWINRPLRDQILLQQRQNAVSTL--LEKRNYSEIYENLRHIGDLERIVARIALRS- 366

Query: 746  ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
                          A  + L +   AL     + Q  ++L        ++QL  I     
Sbjct: 367  --------------ARPRDLMQLRQALGVLPTLHQQLTNLPL------NKQLQEI---KN 403

Query: 806  GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL---- 860
             L     + +  K A       N   +I  GGV  D YD+   +++ +  +  + L    
Sbjct: 404  NLGLFDELFRLLKKAI----IENPPIVIRDGGVIADGYDAPLDELRNMSTNSHQFLIDLE 459

Query: 861  KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
            +++R+    T I  V +G +    Y +E+  +     P +Y  R + K   RY TP +K 
Sbjct: 460  QQERE---RTKINTVKVGYNRIHGYYIEISRAQAKQAPTEYIRRQTLKNVERYITPELKI 516

Query: 918  LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YE 975
               ++  + S   +  K + ++L+    E     +Q  +A A LD L +LA  +D   + 
Sbjct: 517  FEDKVLSSRSRALAREKELYEQLLDTLIEKLIPLQQCASAIANLDVLNTLAERADTLNFN 576

Query: 976  GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
             P         C  + P I  ++  HP++  +++    F+PND  +        +++TGP
Sbjct: 577  APQF-------C--DYPIIKIEAGRHPIV--ENVMTDPFMPNDTHLDE--KRRMLIITGP 623

Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
            NMGGKST +RQ  L  +LA +G+ VPA+  ++ P+DRIF R+GA D + +G+STF+ E++
Sbjct: 624  NMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMT 683

Query: 1096 ETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVD 1155
            ETA +L +AT  SLV++DE+GRGTST DG ++A +   +   K++   LF+THY  L   
Sbjct: 684  ETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATKLKAFALFATHYFELTAL 743

Query: 1156 YKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAV 1215
                  V   H+     + V   E++ FL+ L  G   KSYG+ VA+LAGIP  V+Q A 
Sbjct: 744  ASTLQAVKNVHL-----DAVEHEEKIIFLHALREGPANKSYGLQVAQLAGIPRSVIQHAR 798

Query: 1216 AKSTEFEAIYGKHKKESEEN---LPADHCV 1242
             K  E E       ++ ++N   LP ++ V
Sbjct: 799  QKLEELENPVISETQQPQQNELFLPIENPV 828


>sp|B0JFY0|MUTS_MICAN DNA mismatch repair protein MutS OS=Microcystis aeruginosa (strain
            NIES-843) GN=mutS PE=3 SV=1
          Length = 882

 Score =  285 bits (730), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 265/920 (28%), Positives = 415/920 (45%), Gaps = 116/920 (12%)

Query: 327  LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPH 379
            L+   + + E K  + + ++ +++G F+E F  DA + ++EL+L           G    
Sbjct: 30   LTPMYQHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAM 89

Query: 380  CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
             G P          L  KGY V + +Q E          E  ++ ++V+R I  ++T GT
Sbjct: 90   TGVPHHALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGT 142

Query: 440  LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
            LT+  +L+A  + ++L A+  + ++         +G+   D++T      Q  D    + 
Sbjct: 143  LTDEGMLNAKKN-NFLAAVVITGEN---------WGLAYSDISTGEFYTTQASD---LTA 189

Query: 500  LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
            L   LS L+P EI+ P N  +P+  R +    ++  +   +P     D+    L  + I+
Sbjct: 190  LSLELSRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIF 242

Query: 560  NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
                 E+ N+          EG G   LP                + A GG L Y++ + 
Sbjct: 243  T--LTEAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT- 285

Query: 620  LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
                     K   +P       +   +++LD     NLE+ +  R G   G+L   ++  
Sbjct: 286  --------QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRT 337

Query: 680  VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
             TA G R LR WL +PL +S  IR RQD +  L+  N     + R+ L  + D+ERL  R
Sbjct: 338  CTAMGSRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLREIYDIERLSGR 396

Query: 740  LFASSEANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLH 798
            + A + AN R+    +L   A+  +L +  + +  G     +A   + A LE    + + 
Sbjct: 397  VGAGT-ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIA 451

Query: 799  HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
            H++      P +     H K+          G +I   G+D   D+  +  +E+     K
Sbjct: 452  HLVES----PPL-----HLKE----------GGVI-REGIDAQLDALRRDYQEV-IDWFK 490

Query: 859  HLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
            +L+   K     S   V+  K   Y + +P S     P+DY  + +     RY T  +K+
Sbjct: 491  NLETTEKERTGISNLKVSYNKTFGYYISLPRSKADFAPKDYVRKQTLVNEERYITTELKE 550

Query: 918  LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
                +  A  E       I   L  Q  E   + R+ VA       +++       Y+G 
Sbjct: 551  KENIILTAVDELNKLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG- 608

Query: 978  TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTG 1034
             CRP I D        I  K   HPV+   SLG G FVPN I +G      +   I+LTG
Sbjct: 609  YCRPEIADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTG 662

Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
            PN  GKS  LRQV L  +LAQ G+ VPA+  +IS  DRIF R+GA D +  GQSTF+ E+
Sbjct: 663  PNASGKSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEM 722

Query: 1095 SETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAV 1154
            +ETA +L+ AT  SLV+LDE+GRGT+T DG +IA SV E+    +Q R +F+THYH L  
Sbjct: 723  NETANILNHATDRSLVLLDEIGRGTATFDGLSIAWSVAEYLATVLQSRTIFATHYHELN- 781

Query: 1155 DYKKDPRVSLCHMACQVGNGVGGVE----EVTFLYRLSPGACPKSYGVNVARLAGIPDKV 1210
                     L  +   V N    V+    E+ FL+++ PG   KSYG+   RLAG+P  V
Sbjct: 782  --------ELASILENVANYQVTVKELPHEIVFLHQVRPGGADKSYGIEAGRLAGLPTSV 833

Query: 1211 LQKAVAKSTEFEAIYGKHKK 1230
            + +A+    + E    KH K
Sbjct: 834  IDRAMQVMGQIE----KHSK 849


>sp|C0R5H4|MUTS_WOLWR DNA mismatch repair protein MutS OS=Wolbachia sp. subsp. Drosophila
            simulans (strain wRi) GN=mutS PE=3 SV=1
          Length = 854

 Score =  284 bits (726), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 268/918 (29%), Positives = 425/918 (46%), Gaps = 120/918 (13%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
            +Q+   K+++ D ++F+++G FYELF  DA   AK L++   K       + P CG P  
Sbjct: 31   EQYLNLKAQYKDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNSCGQDIPMCGVPAH 90

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
            +    + KL   G++V + +Q ET ++     K++G K  +VKR++  VVT GT+ E  L
Sbjct: 91   SSESYLHKLIDLGFKVAICDQLETADE----AKKRGYKS-IVKRDVVRVVTPGTIIEDSL 145

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLL 504
            L    + +YL ++ E N           + I  ++++T +       +  LD  +L    
Sbjct: 146  LEDKSN-NYLASIVEQNDE---------YAISWLELSTGKFFHTLTSLKALDSDLL---- 191

Query: 505  SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
              + P E++        E  R++L++ +  +        E+  +  T+ E   I      
Sbjct: 192  -RISPRELLISEKFTEDEKIRSVLKNYKISITQHAQSFFEYSKSHRTLCEFYKI------ 244

Query: 565  ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
                                        EL S G+     + A G  L Y+         
Sbjct: 245  ---------------------------RELGSIGNFSKVEIMACGALLEYV--------- 268

Query: 625  LRFAKFELLPCSGFGDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
             R  +   +P   F    K+  +M++DA A  NLE+F +++ G+  G+L + ++H VTA 
Sbjct: 269  -RVTQRGSIPRLEFPKTYKQQNFMLIDASARRNLELF-STQFGEKKGSLISVIDHTVTAS 326

Query: 684  GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
            G RLL+  LA PL  S  I  R          ++P   + R+ LS +PD+ER L+RL   
Sbjct: 327  GGRLLKQMLASPLACSKAINLRLSTAQFFVNNHEP-RRKIREILSNIPDIERSLSRLIL- 384

Query: 744  SEANGRNSNK-VVLYEDAAKK--QLQEFISALHGCELMDQA----CSSLGAILENTESRQ 796
                GR S K + L +    K  +L EF+S LH   L +++      S   + +  E   
Sbjct: 385  ----GRGSPKDMNLLKIGLGKTLELSEFLSTLHNYCLSEKSEINSQMSFQCLTKEKEPVS 440

Query: 797  LHHILTPGKG-LPAIVSILKHFKDAFDWVEA----NNSGRIIPHGGVDMDYDSACKKVKE 851
               +++  +  L  I   L + KD F+ + +    NN   +   G +   Y+S   ++  
Sbjct: 441  TTQVISSDESELSTIHKSLGNHKDLFELLNSAILDNNLSSVKEGGFIHSKYNSELSELSY 500

Query: 852  I----EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL-RSSKKG 906
            I       +TK  +  R L G  ++  +      Y +EV  S    +  D  + R S   
Sbjct: 501  ILNNSNKLVTKLRESYRDLTGIAALKILHNNILGYYVEV--SANHKITSDIFIHRQSLAN 558

Query: 907  FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
              RY T  +K+L  ++  A          I   L  +  +   K      A A+LD  I 
Sbjct: 559  SMRYTTNELKELENKILTARDAAIGLEMKIFSELCSEVAKESEKIALAANALAKLD--IR 616

Query: 967  LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
             A A    +    +P+I DS   E    S +   HPV+  ++    +F+ N I + G   
Sbjct: 617  TAFAELAVQNNYVKPIIDDS--KEFNICSGR---HPVVEVNN----KFIANSINLAG--- 664

Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
                L+TGPNM GKST LRQ  L  +LA +G+ VPAE   I  +D+IF R+GA D+I AG
Sbjct: 665  --IHLITGPNMAGKSTFLRQNALIAVLAHMGSFVPAESAHIGVIDKIFSRVGATDNITAG 722

Query: 1087 QSTFLTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKV-QCRGLF 1145
             STF+ E+ ETA +++ AT  SLV+LDE+GRGT   DG +IA++V+EH +H V +CR +F
Sbjct: 723  YSTFMVEMIETATIVNQATDRSLVILDEIGRGTGVYDGLSIAQAVIEH-IHNVNKCRAIF 781

Query: 1146 STHYHRLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAG 1205
            +THYH L    K    V    +  +  NG     EV FL+ +  G   +SYG++VA+LAG
Sbjct: 782  ATHYHELTKVSKYLKNVKCFCVKIREWNG-----EVIFLHEVIEGIADESYGIHVAKLAG 836

Query: 1206 IPDKVLQKAVAKSTEFEA 1223
             PD VL +A     E +A
Sbjct: 837  FPDSVLNRASEVFEELKA 854


>sp|P0DC61|MUTS_STRPQ DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
            M3 (strain SSI-1) GN=mutS PE=3 SV=1
          Length = 851

 Score =  284 bits (726), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 250/904 (27%), Positives = 415/904 (45%), Gaps = 146/904 (16%)

Query: 326  NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
            N+S G +Q+ + K  + D  + F+MG FYELF  DA   A+ L++      +      P 
Sbjct: 5    NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64

Query: 380  CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
             G P  +    ++ L   GY+V V EQ E P+Q             VVKRE+  V+T GT
Sbjct: 65   AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114

Query: 440  LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
            + +    SA PD++        N    +   D C +G+  +DV+T       V D  D +
Sbjct: 115  VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159

Query: 499  VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
             +   +  L+  E++   ++   E E+ IL    N L++           E TV E K++
Sbjct: 160  SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207

Query: 559  YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
             +                                     G   +  L+A G  L Y+ K+
Sbjct: 208  ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230

Query: 619  FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
             + E   L     +E+           K Y+ +      +L++ EN+R+    G+LY  L
Sbjct: 231  QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279

Query: 677  NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
            +   TA G RLLR+W+ RPL +   I ERQ+ +       Q F   F        +L  +
Sbjct: 280  DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332

Query: 731  PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
             D+ERL +R+     + G+ + K +L       QL   ++              + AILE
Sbjct: 333  YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQ----------VPYIKAILE 370

Query: 791  NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
            + +S  +  ++     LP +  +++   D  D     + G II   G D   D   K ++
Sbjct: 371  SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428

Query: 851  EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
            E    +     ++R+  G  ++      KD Y   V  S    VP  +  +++ K   RY
Sbjct: 429  EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488

Query: 911  WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
             T  + K+ G++ +A  E  S    I   +  Q   + N+ +++    A +D L SLA+ 
Sbjct: 489  GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548

Query: 971  SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
            ++       RP       N+   I+ +   H V+    +G  E++PN I+       S  
Sbjct: 549  AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598

Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
            L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+  ++   D IF R+GA D +++GQSTF
Sbjct: 599  LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658

Query: 1091 LTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYH 1150
            + E+ E    +  A+ NSL++ DELGRGT+T DG A+A++++E+   +V  + +F+THYH
Sbjct: 659  MVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYH 718

Query: 1151 RLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKV 1210
             L     K   +   H+A    +G     +VTFL++++ G   KSYG++VA++AG+P  +
Sbjct: 719  ELTDLSTKLTSLVNVHVATLEKDG-----DVTFLHKIAEGPADKSYGIHVAKIAGLPKSL 773

Query: 1211 LQKA 1214
            L++A
Sbjct: 774  LKRA 777


>sp|P0DC60|MUTS_STRP3 DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
            M3 (strain ATCC BAA-595 / MGAS315) GN=mutS PE=3 SV=1
          Length = 851

 Score =  284 bits (726), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 250/904 (27%), Positives = 415/904 (45%), Gaps = 146/904 (16%)

Query: 326  NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
            N+S G +Q+ + K  + D  + F+MG FYELF  DA   A+ L++      +      P 
Sbjct: 5    NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64

Query: 380  CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
             G P  +    ++ L   GY+V V EQ E P+Q             VVKRE+  V+T GT
Sbjct: 65   AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114

Query: 440  LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
            + +    SA PD++        N    +   D C +G+  +DV+T       V D  D +
Sbjct: 115  VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159

Query: 499  VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
             +   +  L+  E++   ++   E E+ IL    N L++           E TV E K++
Sbjct: 160  SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207

Query: 559  YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
             +                                     G   +  L+A G  L Y+ K+
Sbjct: 208  ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230

Query: 619  FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
             + E   L     +E+           K Y+ +      +L++ EN+R+    G+LY  L
Sbjct: 231  QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279

Query: 677  NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
            +   TA G RLLR+W+ RPL +   I ERQ+ +       Q F   F        +L  +
Sbjct: 280  DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332

Query: 731  PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
             D+ERL +R+     + G+ + K +L       QL   ++              + AILE
Sbjct: 333  YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQ----------VPYIKAILE 370

Query: 791  NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
            + +S  +  ++     LP +  +++   D  D     + G II   G D   D   K ++
Sbjct: 371  SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428

Query: 851  EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
            E    +     ++R+  G  ++      KD Y   V  S    VP  +  +++ K   RY
Sbjct: 429  EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488

Query: 911  WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
             T  + K+ G++ +A  E  S    I   +  Q   + N+ +++    A +D L SLA+ 
Sbjct: 489  GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548

Query: 971  SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
            ++       RP       N+   I+ +   H V+    +G  E++PN I+       S  
Sbjct: 549  AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598

Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
            L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+  ++   D IF R+GA D +++GQSTF
Sbjct: 599  LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658

Query: 1091 LTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYH 1150
            + E+ E    +  A+ NSL++ DELGRGT+T DG A+A++++E+   +V  + +F+THYH
Sbjct: 659  MVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYH 718

Query: 1151 RLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKV 1210
             L     K   +   H+A    +G     +VTFL++++ G   KSYG++VA++AG+P  +
Sbjct: 719  ELTDLSTKLTSLVNVHVATLEKDG-----DVTFLHKIAEGPADKSYGIHVAKIAGLPKSL 773

Query: 1211 LQKA 1214
            L++A
Sbjct: 774  LKRA 777


>sp|B3QPY5|MUTS_CHLP8 DNA mismatch repair protein MutS OS=Chlorobaculum parvum (strain NCIB
            8327) GN=mutS PE=3 SV=1
          Length = 876

 Score =  283 bits (725), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 271/917 (29%), Positives = 413/917 (45%), Gaps = 132/917 (14%)

Query: 332  KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
            +Q+ E K ++ + V+ F++G FYE F  DA   +  L++   K      GE P  GFP  
Sbjct: 17   RQYLEVKERYPEYVLLFRVGDFYETFLDDAVTVSAALNIVLTKRSNGSAGEIPLAGFPHH 76

Query: 386  NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
                 + KL  KG++V V +Q E P         KG    +VKREI  +VT G     ++
Sbjct: 77   ASEGYIAKLVTKGFKVAVCDQVEDPAL------AKG----IVKREITDIVTPGITYSDKI 126

Query: 446  LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
            L    + +YL A+     +   +  +   G+  VDV T+       M +L  + L   L 
Sbjct: 127  LDDRHN-NYLCAV-----ALFKRGREHLAGVAFVDVTTAEF----RMTELPVAELKDFLQ 176

Query: 506  ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW----DAETTVLEIKNIYNR 561
             L P EI+    + S + E   LR +    +N L  + + W    +  + VLE     N 
Sbjct: 177  SLHPSEIL----ISSRDKE---LRDSLAKSMNTLFTVLDEWMFSAEQASQVLE-----NH 224

Query: 562  ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
                SL            +G G+    G+    I+ G     +  A  G+L YL +    
Sbjct: 225  FKTHSL------------KGFGI---DGVEGGRIAAGAILQYLEEAKQGSLKYLVR---- 265

Query: 622  ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
                             G +     M LD     NLE+  + + G  +G+L   ++    
Sbjct: 266  ----------------IGLVESAETMTLDIQTRRNLEIISSMQDGSLNGSLLEVIDRTKN 309

Query: 682  AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
              G RLLR WL  PL     + +R DAV  L   +     E R+ L  + D+ER LAR+ 
Sbjct: 310  PMGARLLRRWLLHPLRKLEAVVQRHDAVEELLE-SDSMREESRQLLGGIIDLERALARI- 367

Query: 742  ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
            A+S A  R                      L G          L A+L + E+++L H+ 
Sbjct: 368  ATSRAMPREVR-------------------LLGSSF--ALIPQLKAMLASCEAQRLRHLA 406

Query: 802  TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
                 LP +   ++   D         SG +   G +   Y     +++ I +     L 
Sbjct: 407  DRLDSLPELAETIERALD------PEASGTLRDGGYIRAGYHEELDELRAISSGARDRLL 460

Query: 862  E-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
            E Q+     TSI+ + +  +    Y +EV  +    VP  YE + +     RY  P +K+
Sbjct: 461  EIQQAERSKTSISTLKVQYNKVFGYYIEVSRANSDKVPEYYEKKQTLVNAERYTIPALKE 520

Query: 918  LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
               ++  AE + +     + Q L           ++  AA AELD L   A  +D Y   
Sbjct: 521  YEEKILTAEEKSQFLEHRLFQELCAAVAAEAASIQKTAAALAELDCLACFASCADEYR-- 578

Query: 978  TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNASFILLTGPN 1036
             CRP +     NE   +S     HPVL    LG  E +V ND  +G   +   +++TGPN
Sbjct: 579  YCRPAM-----NEGTELSITGGRHPVLER-ILGADEPYVANDCRVG--SDQQLLIITGPN 630

Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
            M GKS+ LRQ  L V+LAQVG+ VPAE  EI  VDRIF R+GA D++ +G+STFL E++E
Sbjct: 631  MAGKSSYLRQAGLVVLLAQVGSFVPAESAEIGLVDRIFTRVGASDNLTSGESTFLVEMNE 690

Query: 1097 TALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYHRLAVDY 1156
             A +L++AT  SL++LDE+GRGTST DG +IA S+ E    +++ R LF+THYH LA   
Sbjct: 691  AASILNNATERSLLLLDEIGRGTSTFDGMSIAWSMCEFIHDRLRARTLFATHYHELAELE 750

Query: 1157 KKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKVLQKAVA 1216
             +  R+   +        V   + V FL ++  GA   SYG+ VA++AG+P +V+++A  
Sbjct: 751  SRFERIVNFNATV-----VETADTVIFLRKIVRGASDNSYGIEVAKMAGMPPEVIERA-- 803

Query: 1217 KSTEFEAIYGKHKKESE 1233
                 E + G  ++E E
Sbjct: 804  ----REILAGMERREVE 816


>sp|Q1JEH0|MUTS_STRPD DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
            M2 (strain MGAS10270) GN=mutS PE=3 SV=1
          Length = 851

 Score =  283 bits (725), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 250/904 (27%), Positives = 410/904 (45%), Gaps = 146/904 (16%)

Query: 326  NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
            N+S G +Q+ + K  + D  + F+MG FYELF  DA   A+ L++      +      P 
Sbjct: 5    NISPGMQQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64

Query: 380  CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
             G P  +    ++ L   GY+V V EQ E P+Q             VVKRE+  V+T GT
Sbjct: 65   AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114

Query: 440  LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
            + +    SA PD++        N    +   D C +G+  +DV+T       V D  D +
Sbjct: 115  VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159

Query: 499  VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
             +   +  L+  E++   ++   E E+ IL    N L++           E TV E K++
Sbjct: 160  SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207

Query: 559  YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
             +                                     G   +  L+A G  L Y+ K+
Sbjct: 208  ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230

Query: 619  FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
             + E   L     +E+           K Y+ +      +L++ EN+R+    G+LY  L
Sbjct: 231  QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279

Query: 677  NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
            +   TA G RLLR+W+ RPL +   I ERQ+ +       Q F   F        +L  +
Sbjct: 280  DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332

Query: 731  PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
             D+ERL +R               V +  A  K L +    L            + AILE
Sbjct: 333  YDIERLSSR---------------VSFGKANPKDLLQLGHTL-------AQVPYIKAILE 370

Query: 791  NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
            + +S  +  ++     LP +  +++   D  D     + G II   G D   D   K ++
Sbjct: 371  SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428

Query: 851  EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
            E    +     ++R+  G  ++      KD Y   V  S    VP  +  +++ K   RY
Sbjct: 429  EGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488

Query: 911  WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
             T  + K+ G++ +A  E  S    I   +  Q   + N+ +++    A +D L SLA+ 
Sbjct: 489  GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVV 548

Query: 971  SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
            ++       RP       N+   I+ +   H V+    +G  E++PN I+       S  
Sbjct: 549  AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598

Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
            L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+  ++   D IF R+GA D +++GQSTF
Sbjct: 599  LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658

Query: 1091 LTELSETALMLSSATRNSLVVLDELGRGTSTSDGQAIAESVLEHFVHKVQCRGLFSTHYH 1150
            + E+ E    +  A+ NSL++ DELGRGT+T DG A+A++++E+   +V  + +F+THYH
Sbjct: 659  MVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYH 718

Query: 1151 RLAVDYKKDPRVSLCHMACQVGNGVGGVEEVTFLYRLSPGACPKSYGVNVARLAGIPDKV 1210
             L     K   +   H+A    +G     +VTFL++++ G   KSYG++VA++AG+P  +
Sbjct: 719  ELTDLSTKLTSLVNVHVATLEKDG-----DVTFLHKIAEGPADKSYGIHVAKIAGLPKSL 773

Query: 1211 LQKA 1214
            L++A
Sbjct: 774  LKRA 777


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.133    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,614,336
Number of Sequences: 539616
Number of extensions: 22277177
Number of successful extensions: 167648
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 1156
Number of HSP's that attempted gapping in prelim test: 132770
Number of HSP's gapped (non-prelim): 23679
length of query: 1288
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1159
effective length of database: 121,958,995
effective search space: 141350475205
effective search space used: 141350475205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)