BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000781
(1288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y4E6|WDR7_HUMAN WD repeat-containing protein 7 OS=Homo sapiens GN=WDR7 PE=1 SV=2
Length = 1490
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 163/416 (39%), Gaps = 67/416 (16%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH V CL V + L+SG +D S+ IWD+ SG + + H + Q+
Sbjct: 462 GHRNKVTCLLYPHQVSARYDQRY---LISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQL 518
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVV-WDCPRGYIAC 686
++ P C SV D SV L SL + + H +P +V+ W Y+
Sbjct: 519 LVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRH-LFPIQVIKWRPSDDYLVV 577
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGI--SMNSISGSVLNGN 744
C D S +++W + TGA +R + G + + + + + +++S+S +N
Sbjct: 578 GCSDGS--------VYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDSLSHPAVNLK 629
Query: 745 TSVSSLLLPIHEDGTFRQSQIQNDERGVAFSTISEPSASHVRKGNSGKPSLNTRIGLQRK 804
+++ L ++ ++Q + S S+ KGN K S N+ +
Sbjct: 630 QAMTRRSLAALKN--MAHHKLQTLATNLLASEASD-------KGNLPKYSHNSLM----- 675
Query: 805 KQTIKCSCPYPGIATLSFDLASLMFPYQMHESAAKN---------------GDKQENFTT 849
Q IK + P I L FD+ +L+ E++ N DK +F T
Sbjct: 676 VQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGSSDKGGSFLT 735
Query: 850 MEHGTETAGPNAMTAADGSNGHSMST-------------DTIEEHTWIKSLEECILRFSL 896
+ T + H + ++ E+ KS +L ++L
Sbjct: 736 GKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEYRSSKSKPLTLLEYNL 795
Query: 897 SF---------LHLWNVDRELDKLLITEMKLKRPENFIVASGLQGEKGSLTLTFPG 943
+ LH W ++ LD++ + + + +P + V+ GL G ++L PG
Sbjct: 796 TMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKP-HCTVSFGLLSRGGHMSLMLPG 850
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 49/122 (40%), Gaps = 26/122 (21%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIAD 68
+W P+H ++A T+ TG DG I W S +I P A+L GH+A I
Sbjct: 12 LWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVE--LQINPRALLFGHTASITC 69
Query: 69 LSICYPAMVSRDGKAEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRR 128
LS KA SS D ++SA G +C+W S G C
Sbjct: 70 LS----------------KACASS--------DKQYIVSASESGEMCLWDVSDGRCIEFT 105
Query: 129 KL 130
KL
Sbjct: 106 KL 107
>sp|Q920I9|WDR7_MOUSE WD repeat-containing protein 7 OS=Mus musculus GN=Wdr7 PE=1 SV=3
Length = 1489
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 161/416 (38%), Gaps = 67/416 (16%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH V CL V + L+SG +D S+ IWD+ SG + + H + Q+
Sbjct: 462 GHRNKVTCLLYPHQVSARYDQRY---LISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQL 518
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVV-WDCPRGYIAC 686
++ P C SV D SV L SL + + H +P +V+ W Y+
Sbjct: 519 LVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRH-LFPIQVIKWRPSDDYLVV 577
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGI--SMNSISGSVLNGN 744
C D S +++W + TGA +R G + + + + + +++S+S +N
Sbjct: 578 GCTDGS--------VYVWQMDTGALDRCAMGITAVEILNACDEAVPAAVDSLSHPAVNLK 629
Query: 745 TSVSSLLLPIHEDGTFRQSQIQNDERGVAFSTISEPSASHVRKGNSGKPSLNTRIGLQRK 804
+++ L ++ ++Q + S S+ KGN K S N+ +
Sbjct: 630 QAMTRRSLAALKN--MAHHKLQTLATNLLASEASD-------KGNLPKYSHNSLM----- 675
Query: 805 KQTIKCSCPYPGIATLSFDLASLMFPYQMHESAAKN---------------GDKQENFTT 849
Q IK + P I L FD+ +L+ E++ N DK +F T
Sbjct: 676 VQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGSSDKGGSFLT 735
Query: 850 -------MEHGTETAGPNAMTAADGSNGHSMST------DTIEEHTWIKSLEECILRFSL 896
+ ET N D+ E+ KS +L ++L
Sbjct: 736 GKRAAVLFQQVKETIKENIKEHLLDEEEDEEEARRQSREDSDPEYRASKSKPLTLLEYNL 795
Query: 897 SF---------LHLWNVDRELDKLLITEMKLKRPENFIVASGLQGEKGSLTLTFPG 943
+ LH W ++ LD++ + + + +P + V+ GL G ++L PG
Sbjct: 796 TMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKP-HCTVSFGLLSRGGHMSLMLPG 850
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 26/122 (21%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIAD 68
+W P+H +++ T+ TG DG I W S E+ P A+L GH+A I
Sbjct: 12 LWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDVSVE--LEVNPRALLFGHTASITC 69
Query: 69 LSICYPAMVSRDGKAEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRR 128
LS +S D +SA +G +C+W + G C
Sbjct: 70 LS------------------------KACASGDKRYTVSASANGEMCLWDVNDGRCIEFT 105
Query: 129 KL 130
KL
Sbjct: 106 KL 107
>sp|Q9ERH3|WDR7_RAT WD repeat-containing protein 7 OS=Rattus norvegicus GN=Wdr7 PE=2
SV=1
Length = 1488
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 170/431 (39%), Gaps = 70/431 (16%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH V CL V + L+SG +D S+ IWD+ SG + + H + Q+
Sbjct: 462 GHRNKVTCLLYPHQVSARYDQRY---LISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQL 518
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVV-WDCPRGYIAC 686
++ P C SV D SV L SL + + H +P +V+ W Y+
Sbjct: 519 LVPPENCSARVQHCVCSVASDHSVGLLSLREKKCIMLASRH-LFPIQVIKWRPSDDYLVV 577
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGI--SMNSISGSVLNGN 744
C D S + +W + TGA +R G + + + + + +++S+S +N
Sbjct: 578 GCTDGS--------VCVWQMDTGALDRCAMGITAVEILNACDEAVPAAVDSLSHPAVNLK 629
Query: 745 TSVSSLLLPIHEDGTFRQSQIQNDERGVAFSTISEPSASHVRKGNSGKPSLNTRIGLQRK 804
+++ L ++ ++Q + S S+ KGN K S N+ +
Sbjct: 630 QAMTRRSLAALKN--MAHHKLQTLATNLLASEASD-------KGNLPKYSHNSLM----- 675
Query: 805 KQTIKCSCPYPGIATLSFDLASLMFPYQMHESAAKNGD--KQENFTTMEHGTETAGPNAM 862
Q IK + P I L FD+ +L+ E++ N EN G+ G + +
Sbjct: 676 VQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKAS-GSSDKGGSFL 734
Query: 863 TAADGSNGHSMSTDTIEEHTWI---------------------------KSLEECILRFS 895
T + +TI+E+ KS +L ++
Sbjct: 735 TGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEVMRQRREESDPEYRASKSKPLTLLEYN 794
Query: 896 LSF---------LHLWNVDRELDKLLITEMKLKRPENFIVASGLQGEKGSLTLTFPGL-K 945
L+ LH W ++ LD++ + + + +P + V+ GL G ++L PG +
Sbjct: 795 LTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKP-HCTVSFGLLSRGGHMSLMLPGYNQ 853
Query: 946 AGLELWKSSSE 956
A +L ++ +E
Sbjct: 854 AAGKLLQAKAE 864
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 26/122 (21%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIAD 68
+W P+H +++ T+ TG DG I W S+ E+ P A+L GH+A I
Sbjct: 12 LWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDLSEE--LEVNPRALLFGHTAAITC 69
Query: 69 LSICYPAMVSRDGKAEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRR 128
LS +S D +SA +G +C+W + G C
Sbjct: 70 LS------------------------KACASGDKQYTVSASANGEMCLWDVNDGRCIEFT 105
Query: 129 KL 130
KL
Sbjct: 106 KL 107
>sp|Q12417|PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRP46 PE=1 SV=1
Length = 451
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A + NE ++GS D ++++WDL +G L T + HV VR +
Sbjct: 137 GHLGWVRCVAIDPVD--------NEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDV 188
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
+S HP+ SV ED +V LE ++ R + GH + V IA
Sbjct: 189 AVSD---RHPY---LFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATA 242
Query: 688 CRDHSRTSDAVDVLFIWDVKT 708
RD V+ +WD++T
Sbjct: 243 GRD--------SVIKLWDMRT 255
Score = 37.7 bits (86), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 15/67 (22%)
Query: 594 LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL 653
+VS S D ++R+WD+ +G + V+ HH VR L P ++FSVA
Sbjct: 281 VVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHP---------------KEFSVAS 325
Query: 654 ASLETLR 660
A + +R
Sbjct: 326 ACTDDIR 332
>sp|Q9WUC8|PLRG1_RAT Pleiotropic regulator 1 OS=Rattus norvegicus GN=Plrg1 PE=2 SV=1
Length = 514
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 202 GHLGWVRCIAVE---------PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH A D P +
Sbjct: 253 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGH--LSAVYGLDLHPTIDVLV 304
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 305 TC---SRDSTA----RIWDVRTKASVHTLSG-HTNAVATVRCQAAEPQIITGS 349
Score = 38.9 bits (89), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 557 VNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITV 616
V + S GHT AV T + + +++GS D +IR+WDL +G
Sbjct: 317 VRTKASVHTLSGHTNAV---------ATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVT 367
Query: 617 MHHHVAPVRQIILSP 631
+ +H VR ++L P
Sbjct: 368 LTNHKKSVRAVVLHP 382
>sp|Q922V4|PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus musculus GN=Plrg1 PE=2 SV=1
Length = 513
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 201 GHLGWVRCIAVE---------PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH A D P +
Sbjct: 252 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGH--LSAVYGLDLHPTLDVLV 303
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 304 TC---SRDSTA----RIWDVRTKASVHTLSG-HTNAVATVRCQAAEPQIITGS 348
Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 557 VNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITV 616
V + S GHT AV T + + +++GS D +IR+WDL +G
Sbjct: 316 VRTKASVHTLSGHTNAV---------ATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVT 366
Query: 617 MHHHVAPVRQIILSP 631
+ +H VR ++L P
Sbjct: 367 LTNHKKSVRAVVLHP 381
>sp|O43660|PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo sapiens GN=PLRG1 PE=1 SV=1
Length = 514
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 202 GHLGWVRCIAVE---------PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH A D P +
Sbjct: 253 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGH--LSAVYGLDLHPTIDVLV 304
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 305 TC---SRDSTA----RIWDVRTKASVHTLSG-HTNAVATVRCQAAEPQIITGS 349
Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 557 VNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITV 616
V + S GHT AV T + + +++GS D +IR+WDL +G
Sbjct: 317 VRTKASVHTLSGHTNAV---------ATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVT 367
Query: 617 MHHHVAPVRQIILSP 631
+ +H VR ++L P
Sbjct: 368 LTNHKKSVRAVVLHP 382
>sp|Q2KID6|PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos taurus GN=PLRG1 PE=2 SV=1
Length = 513
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 201 GHLGWVRCIAVE---------PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH A D P +
Sbjct: 252 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGH--LSAVYGLDLHPTIDVLV 303
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 304 TC---SRDSTA----RIWDVRTKASVHTLSG-HTNAVATVRCQAAEPQIITGS 348
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 557 VNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITV 616
V + S GHT AV T + + +++GS D +IR+WDL +G
Sbjct: 316 VRTKASVHTLSGHTNAV---------ATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVT 366
Query: 617 MHHHVAPVRQIILSP 631
+ +H VR ++L P
Sbjct: 367 LTNHKKSVRAVVLHP 381
>sp|O13615|PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp5 PE=1 SV=1
Length = 473
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 23/153 (15%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C V G N+ +G+ D +I+IWDL SG L + H+A VR +
Sbjct: 161 GHLGWVRC------VDVEPG---NQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGL 211
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
+SP HP+ S GED V LET +V R + GH + + +
Sbjct: 212 AVSP---RHPY---LFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTA 265
Query: 688 CRDHSRTSDAVDVLFIWDVKTGARERVLRGTAS 720
RD V +WD++T VL G S
Sbjct: 266 GRD--------AVARVWDMRTRQNVHVLSGHKS 290
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH V LA F+ +V+GSMD +IR+WDL +G +T + HH VR +
Sbjct: 287 GHKSTVASLAVQE---------FDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRAL 337
Query: 628 ILSPPQ 633
L P +
Sbjct: 338 SLHPDE 343
>sp|Q5BE22|PRP46_EMENI Pre-mRNA-splicing factor prp46 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prp46
PE=3 SV=1
Length = 452
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V LA NE SG+ D +I+IW+L +G L + H++ VR +
Sbjct: 141 GHLGWVRSLAVE---------PNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGL 191
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
+SP HP+ S GED V LET +V R + GH + + +
Sbjct: 192 AVSP---RHPY---LFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTG 245
Query: 688 CRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGSV 740
RD V +WD++T + VL G ++ D C+ I+GS+
Sbjct: 246 GRD--------GVARVWDMRTRSNIHVLSGHTG-TVADVQCQEADPQVITGSL 289
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 53/166 (31%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHTG V + + +++GS+D ++R+WDL +G + V+ HH +R +
Sbjct: 267 GHTGTVADVQCQEA---------DPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSL 317
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
P +F+ A AS +++ W CP G
Sbjct: 318 ATHP---------------REFTFASASTGSIK---------------QWKCPGGEFMQN 347
Query: 688 CRDHSRTSDAV-----DVLF---------IWDVKTGARERVLRGTA 719
H+ + + +VLF WD KTG R + + TA
Sbjct: 348 FEGHNAIINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTA 393
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHT V C+A M G+ +LV+GS D ++R+WD+ SG + +H H A VR +
Sbjct: 336 GHTSTVRCMA---MAGS--------ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYI 684
+S G DF+V + + T R R GH N ++++ R +
Sbjct: 385 QFDGT--------TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
>sp|Q4WT34|PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=prp46
PE=3 SV=1
Length = 453
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V LA NE SG+ D +I+IW+L +G L + H++ VR +
Sbjct: 142 GHLGWVRSLAVE---------PNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGL 192
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
+SP HP+ S GED V LET +V R + GH + + +
Sbjct: 193 AVSP---RHPY---LFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTG 246
Query: 688 CRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGSV 740
RD V +WD++T + VL G ++ D C+ I+GS+
Sbjct: 247 GRD--------GVARVWDMRTRSNIHVLSGHKG-TVADLKCQEADPQIITGSL 290
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 45/166 (27%)
Query: 561 VSRQYFLGHTGAVLCLAAHR-MVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHH 619
V+R + + + L+ H+ V K + +++GS+D ++R+WDL +G + V+ H
Sbjct: 251 VARVWDMRTRSNIHVLSGHKGTVADLKCQEADPQIITGSLDATVRLWDLAAGKTMGVLTH 310
Query: 620 HVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC 679
H VR + + P +F+ A AS +++ W C
Sbjct: 311 HKKGVRNLAIHP---------------REFTFASASTGSIK---------------QWKC 340
Query: 680 PRGYIACLCRDHSRTSDAV-----DVLF---------IWDVKTGAR 711
P G H+ +++ +VLF WD KTG +
Sbjct: 341 PEGDFMQNFEGHNAVINSLAVNEDNVLFSGGDNGSMCFWDWKTGYK 386
>sp|Q6C709|PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PRP46 PE=3 SV=2
Length = 441
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 579 HRMVGTAKGW-------SFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSP 631
+R++ +GW N+ +GS D +I+IWDL +G L + H+ VR + +SP
Sbjct: 125 YRVITGHQGWVRSVCVEPENQWFATGSADKTIKIWDLATGKLRLTLTGHIMGVRALGVSP 184
Query: 632 PQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGH 668
HP+ S GED V LET +V R + GH
Sbjct: 185 ---RHPY---MFSGGEDKMVKCWDLETNKVVRHYHGH 215
Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 561 VSRQYFLGHTGAVLCLAAHR-MVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHH 619
V+R + + V+ L+ H+ + K + +++ S D ++R+W+L +G +T + H
Sbjct: 239 VARVWDIRTRDPVVVLSGHKSTINRVKFQASEPQVITASADETVRLWNLQAGKTMTTLTH 298
Query: 620 HVAPVRQIILSPPQ 633
H VR + L P +
Sbjct: 299 HKKSVRGLTLHPEE 312
>sp|Q6CKE8|PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=PRP46 PE=3 SV=1
Length = 434
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 64/153 (41%), Gaps = 22/153 (14%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHTG V C+ + NE +GS D +I+IWDL +G L + HV VR I
Sbjct: 120 GHTGWVRCVCVDPV--------DNEWFATGSNDTTIKIWDLAAGKLKITLIGHVMSVRDI 171
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
+S HP+ S ED V LE R F GH + V IA
Sbjct: 172 AIS---KRHPY---MFSASEDKLVKCWDLERNTAIRDFHGHLSGVHTVDVHPSLDIIATA 225
Query: 688 CRDHSRTSDAVDVLFIWDVKTGARERVLRGTAS 720
RD V+ +WD+++ + VL G S
Sbjct: 226 GRDA--------VVRLWDIRSRSEIMVLPGHKS 250
Score = 36.2 bits (82), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 561 VSRQYFLGHTGAVLCLAAHRM-VGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHH 619
V R + + ++ L H+ + K + ++S S D ++R+WD+ +G V+ H
Sbjct: 230 VVRLWDIRSRSEIMVLPGHKSPINKVKCLPVDPQIISCSGDATVRLWDIIAGKASKVLTH 289
Query: 620 HVAPVRQIILSPPQ 633
H +R + L P +
Sbjct: 290 HSRNIRDLTLHPAE 303
>sp|Q91854|TRCB_XENLA Beta-TrCP OS=Xenopus laevis GN=fbxw1 PE=2 SV=1
Length = 518
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 56/195 (28%)
Query: 558 NSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNE-VLVSGSMDCSIRIWDLGSGNLITV 616
N+ ++ +GHTG+VLCL ++E V+++GS D ++R+WD+ +G ++
Sbjct: 260 NTLECKRVLMGHTGSVLCL------------QYDERVIITGSSDSTVRVWDVNTGEMLNT 307
Query: 617 MHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVA---LASLETLRVERMFPGHP---- 669
+ HH V + + + ++ +D S+A +AS + + R+ GH
Sbjct: 308 LIHHCEAVLHLRFN--------NGMMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 359
Query: 670 --NYPAKV-----------VWDC------------PRGYIACL-CRDHSRTSDAVD-VLF 702
++ K VW+ RG IACL RD S + D +
Sbjct: 360 VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIR 418
Query: 703 IWDVKTGARERVLRG 717
+WD++ GA RVL G
Sbjct: 419 LWDIECGACLRVLEG 433
>sp|Q6FJZ9|PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PRP46 PE=3 SV=1
Length = 427
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 74/190 (38%), Gaps = 49/190 (25%)
Query: 560 HVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHH 619
H++R GH G V C+A ++ NE +GS D +I+IW+L SG L +
Sbjct: 106 HLTR-VIHGHHGWVRCIAMDKV--------DNEWFATGSNDKTIKIWNLASGKLKVTLKA 156
Query: 620 HVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPG----------HP 669
H VR + +S HP+ SV ED +V LE R + G HP
Sbjct: 157 HDMTVRDLAIS---NRHPY---MFSVSEDKTVKCWDLEKNTAIRNYHGHLSGVHTVDIHP 210
Query: 670 NYPAKV---------VWDC--------------PRGYIACLCRDHSRTSDAVDV-LFIWD 705
V VWD P + CL D S +VD + +WD
Sbjct: 211 TVDVVVTAGRDSVVKVWDIRTRLPVMTLPGHKGPITKVRCLPVDPQVISSSVDASIRLWD 270
Query: 706 VKTGARERVL 715
+ G +VL
Sbjct: 271 LVAGKSMKVL 280
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 594 LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQ 633
++S S+D SIR+WDL +G + V+ HH VR I + P +
Sbjct: 257 VISSSVDASIRLWDLVAGKSMKVLTHHQRTVRDISVHPSE 296
>sp|Q9Y297|FBW1A_HUMAN F-box/WD repeat-containing protein 1A OS=Homo sapiens GN=BTRC PE=1
SV=1
Length = 605
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 56/195 (28%)
Query: 558 NSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNE-VLVSGSMDCSIRIWDLGSGNLITV 616
N+ ++ GHTG+VLCL ++E V+++GS D ++R+WD+ +G ++
Sbjct: 331 NTLECKRILTGHTGSVLCL------------QYDERVIITGSSDSTVRVWDVNTGEMLNT 378
Query: 617 MHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVA---LASLETLRVERMFPGHP---- 669
+ HH V + + + ++ +D S+A +AS + + R+ GH
Sbjct: 379 LIHHCEAVLHLRFN--------NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 430
Query: 670 --NYPAKV-----------VWDC------------PRGYIACL-CRDHSRTSDAVD-VLF 702
++ K VW+ RG IACL RD S + D +
Sbjct: 431 VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIR 489
Query: 703 IWDVKTGARERVLRG 717
+WD++ GA RVL G
Sbjct: 490 LWDIECGACLRVLEG 504
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 19/117 (16%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHT V C+A N LV+GS DC++R+WD+ +G + + H A VR +
Sbjct: 338 GHTSTVRCMAM-----------ANTTLVTGSRDCTLRVWDIETGLHVRTLQGHQAAVRCV 386
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYI 684
+ +S G DF+V + + + R GH N ++++ R +
Sbjct: 387 QFD--------GNIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIV 435
>sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop1 PE=1 SV=1
Length = 775
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHT +V +A +++VS S D ++R+W +G + V+ HV V +
Sbjct: 575 GHTDSVREVAC-----------LGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSV 623
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
++P + + C +S G D + + +LE+ + + GH N ++V ++ A
Sbjct: 624 TINPSRQQ-----C-ISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASA 677
Query: 688 CRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDH 726
D S L +WD+ TG+ +L+ H F H
Sbjct: 678 PPDTS--------LRVWDLNTGSCRDILKCPLGHIFFQH 708
Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 36/130 (27%)
Query: 595 VSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIIL---------SPPQTEHPWSDCFLSV 645
+S D IRIW+L SG L+ +H H V Q+ +PP T
Sbjct: 633 ISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDT----------- 681
Query: 646 GEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWD 705
+LRV + G + + CP G+I + S + L +WD
Sbjct: 682 ------------SLRVWDLNTG----SCRDILKCPLGHIFFQHDESKVVSGSHSTLQLWD 725
Query: 706 VKTGARERVL 715
+++G R L
Sbjct: 726 IRSGKLVRDL 735
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 588 WSFNEV---LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
W+F V LV+GS D ++R+WDL +G V + H + +R I
Sbjct: 450 WTFEYVGDTLVTGSTDRTVRVWDLRTGECKQVFYGHTSTIRCI 492
>sp|Q3ULA2|FBW1A_MOUSE F-box/WD repeat-containing protein 1A OS=Mus musculus GN=Btrc PE=1
SV=2
Length = 605
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 56/190 (29%)
Query: 563 RQYFLGHTGAVLCLAAHRMVGTAKGWSFNE-VLVSGSMDCSIRIWDLGSGNLITVMHHHV 621
++ GHTG+VLCL ++E V+++GS D ++R+WD+ +G ++ + HH
Sbjct: 336 KRILTGHTGSVLCL------------QYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHC 383
Query: 622 APVRQIILSPPQTEHPWSDCFLSVGEDFSVA---LASLETLRVERMFPGHP------NYP 672
V + + + ++ +D S+A +AS + + R+ GH ++
Sbjct: 384 EAVLHLRFN--------NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 435
Query: 673 AKV-----------VWDC------------PRGYIACL-CRDHSRTSDAVD-VLFIWDVK 707
K VW+ RG IACL RD S + D + +WD++
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIRLWDIE 494
Query: 708 TGARERVLRG 717
GA RVL G
Sbjct: 495 CGACLRVLEG 504
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 70/186 (37%), Gaps = 49/186 (26%)
Query: 566 FLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVR 625
GHT V C+ H + +VSGS D ++R+WD+ +G + V+ HVA VR
Sbjct: 379 LYGHTSTVRCMHLH-----------EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 427
Query: 626 QIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKV---------- 675
+ + +S DF V + ET GH N +
Sbjct: 428 CVQYDGRR--------VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSG 479
Query: 676 -------VWDCPRGY-IACLCRDHSRTS------------DAVDVLFIWDVKTGARERVL 715
VWD G I L S TS +A + IWD+KTG + L
Sbjct: 480 SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTL 539
Query: 716 RGTASH 721
+G + H
Sbjct: 540 QGPSKH 545
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 44/200 (22%)
Query: 550 SPGASLKVNSHVSRQ---YFLGHTGAVLCLAAHRMVGTAKGWS---FNEVLVSGSMDCSI 603
S +LKV S V+ + +GHTG V WS + +++SGS D ++
Sbjct: 320 SDDNTLKVWSAVTGKCLRTLVGHTGGV--------------WSSQMRDNIIISGSTDRTL 365
Query: 604 RIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSV-----GEDFSVALASLET 658
++W+ +G I ++ H + VR + L + D L V G+ V + +
Sbjct: 366 KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 425
Query: 659 LRV-----ERMFPGHPNYPAKVVWD-----CPRGYIACLCRDHSRTSDAVDV-------- 700
+R R+ G ++ K VWD C R +S D + V
Sbjct: 426 VRCVQYDGRRVVSGAYDFMVK-VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTS 484
Query: 701 LFIWDVKTGARERVLRGTAS 720
+ +WDV+TG L G S
Sbjct: 485 IRVWDVETGNCIHTLTGHQS 504
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 69/186 (37%), Gaps = 49/186 (26%)
Query: 566 FLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVR 625
GHT V C+ H + +VSGS D ++R+WD+ +G + V+ HVA VR
Sbjct: 457 LYGHTSTVRCMHLH-----------EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 505
Query: 626 QIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKV---------- 675
+ + +S DF V + ET GH N +
Sbjct: 506 CVQYDGRR--------VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSG 557
Query: 676 -------VWDCPRGY-IACLCRDHSRTS------------DAVDVLFIWDVKTGARERVL 715
VWD G I L S TS +A + IWD+KTG + L
Sbjct: 558 SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTL 617
Query: 716 RGTASH 721
+G H
Sbjct: 618 QGPNKH 623
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 44/189 (23%)
Query: 550 SPGASLKVNSHVSRQ---YFLGHTGAVLCLAAHRMVGTAKGWS---FNEVLVSGSMDCSI 603
S +LKV S V+ + +GHTG V WS + +++SGS D ++
Sbjct: 398 SDDNTLKVWSAVTGKCLRTLVGHTGGV--------------WSSQMRDNIIISGSTDRTL 443
Query: 604 RIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSV-----GEDFSVALASLET 658
++W+ +G I ++ H + VR + L + D L V G+ V + +
Sbjct: 444 KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 503
Query: 659 LRV-----ERMFPGHPNYPAKVVWD-----CPRGYIACLCRDHSRTSDAVDV-------- 700
+R R+ G ++ K VWD C R +S D + V
Sbjct: 504 VRCVQYDGRRVVSGAYDFMVK-VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTS 562
Query: 701 LFIWDVKTG 709
+ +WDV+TG
Sbjct: 563 IRVWDVETG 571
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11
PE=1 SV=1
Length = 542
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 56/189 (29%)
Query: 564 QYFLGHTGAVLCLAAHRMVGTAKGWSFNE-VLVSGSMDCSIRIWDLGSGNLITVMHHHVA 622
+ GHTG+VLCL ++E V+V+GS D ++R+WD+ +G ++ + HH
Sbjct: 274 KVLTGHTGSVLCL------------QYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNE 321
Query: 623 PVRQIILSPPQTEHPWSDCFLSVGEDFSVA---LASLETLRVERMFPGHP------NYPA 673
V + S + ++ +D S+A +AS + + R+ GH ++
Sbjct: 322 AVLHLRFS--------NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD 373
Query: 674 KV-----------VWDC------------PRGYIACL-CRDHSRTSDAVD-VLFIWDVKT 708
K VW RG IACL RD S + D + +WD++
Sbjct: 374 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIRLWDIEC 432
Query: 709 GARERVLRG 717
GA RVL G
Sbjct: 433 GACLRVLEG 441
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11
PE=1 SV=1
Length = 542
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 56/189 (29%)
Query: 564 QYFLGHTGAVLCLAAHRMVGTAKGWSFNE-VLVSGSMDCSIRIWDLGSGNLITVMHHHVA 622
+ GHTG+VLCL ++E V+V+GS D ++R+WD+ +G ++ + HH
Sbjct: 274 KVLTGHTGSVLCL------------QYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNE 321
Query: 623 PVRQIILSPPQTEHPWSDCFLSVGEDFSVA---LASLETLRVERMFPGHP------NYPA 673
V + S + ++ +D S+A +AS + + R+ GH ++
Sbjct: 322 AVLHLRFS--------NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD 373
Query: 674 KV-----------VWDC------------PRGYIACL-CRDHSRTSDAVD-VLFIWDVKT 708
K VW RG IACL RD S + D + +WD++
Sbjct: 374 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIRLWDIEC 432
Query: 709 GARERVLRG 717
GA RVL G
Sbjct: 433 GACLRVLEG 441
>sp|Q75BY3|PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PRP46
PE=3 SV=2
Length = 425
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHTG V C+ + N +GS D +IR+WDL +G L + H+ VR I
Sbjct: 111 GHTGWVRCVCVDPVD--------NAWFATGSNDSTIRVWDLATGKLKVTLQGHIMTVRDI 162
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPG 667
+S HP+ S +D V LE V R F G
Sbjct: 163 CIS---ARHPY---MFSASQDKLVKCWDLERNTVVRDFHG 196
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 561 VSRQYFLGHTGAVLCLAAHRM-VGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHH 619
V R + + VL LA HR + + + +VS S D ++++WDL +G + + H
Sbjct: 221 VVRVWDIRSRSCVLTLAGHRGPINKVRCLPVDPQIVSCSTDATVKLWDLVAGKPMKTLTH 280
Query: 620 HVAPVRQIILSPPQ 633
H VR + +P +
Sbjct: 281 HKRNVRDLAFNPTE 294
>sp|A7EKM8|LIS1_SCLS1 Nuclear distribution protein PAC1 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=pac1 PE=3 SV=1
Length = 458
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 18/178 (10%)
Query: 544 LFERHNSPGASLKVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSI 603
L R+ P A L + +R H A+ C+A H + + L SGS DC+I
Sbjct: 91 LSNRNTDPTAWLPKSP--ARHNLQSHREAITCVAFHPVFSS---------LASGSEDCTI 139
Query: 604 RIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL-ASLETLRVE 662
+IWD G L + H V + P+ S D ++ L + +
Sbjct: 140 KIWDWELGELELTVKGHTRAVLDVDFGGPRG----GTLLASCSSDLTIKLWDPSDQYKNI 195
Query: 663 RMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVD-VLFIWDVKTGARERVLRGTA 719
R PGH ++ V P G + S + D L IWDV TG + +RG A
Sbjct: 196 RTLPGH-DHSVSAVRFIPSGAAGSPSSGNLLVSASRDKTLRIWDVSTGYCVKTVRGHA 252
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 583 GTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCF 642
G A S +LVS S D ++RIWD+ +G + + H VR + P + W
Sbjct: 214 GAAGSPSSGNLLVSASRDKTLRIWDVSTGYCVKTVRGHADWVRDVA---PSYDGRW---L 267
Query: 643 LSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGY-----IACLCRDHSRTSDA 697
LS G D + + + + GH N V+ P Y +A L + + +S A
Sbjct: 268 LSAGVDQTARIWDASSGEPKATLLGHENTIECCVFAPPASYPHLAAMAGLKKPPAASSSA 327
Query: 698 VDVLFIWDVKTGARERVLR 716
+ TGAR++ +R
Sbjct: 328 E------YIATGARDKSIR 340
>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans
GN=lin-23 PE=1 SV=2
Length = 665
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHTG+VLCL N V++SGS D ++R+WD+ +G I + HH V +
Sbjct: 260 GHTGSVLCLQYD-----------NRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHL 308
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVA---LASLETLRVERMFPGH 668
+ + ++ +D S+A + S + + R+ GH
Sbjct: 309 RFA--------NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 573 VLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
V LA HR G A ++VSGS D +IR+WD+ SG + V+ H VR I
Sbjct: 378 VRTLAGHRR-GIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCI 431
>sp|Q3MJ13|WDR72_HUMAN WD repeat-containing protein 72 OS=Homo sapiens GN=WDR72 PE=2 SV=2
Length = 1102
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 39/172 (22%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIAD 68
+W P H +TA T+ TG +G + W+ S +I +L GHSA +
Sbjct: 10 LWGQKAPPHSITAIMITDDQRTIVTGSQEGQLCLWNLSHE--LKISAKELLFGHSASVTC 67
Query: 69 LSICYPAMVSRDGKAEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRR 128
L+ +RD + + ++SA +G +CVW+ ++G C +
Sbjct: 68 LA------RARDFSKQPY------------------IVSAAENGEMCVWNVTNGQCMEKA 103
Query: 129 KLPPWVGSPSVICTLPSNPRYVCIG---CC-------FIDTNQLSDHHSFES 170
LP + IC + R G CC ID L+ HSF S
Sbjct: 104 TLP---YRHTAICYYHCSFRMTGEGWLLCCGEYQDVLIIDAKTLAVVHSFRS 152
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 17/214 (7%)
Query: 504 DFVHKEKIVSSSMVISESFYAPY--AIVYGFFSGEIEVIQ-FDLFERHNSPGASLKVNSH 560
D+ K + + V++ S Y P ++ G G I + Q + + G SL V
Sbjct: 393 DYFSGLKDGAGTAVVTSSEYIPSLDKLICGCEDGTIIITQALNAAKARLLEGGSL-VKDS 451
Query: 561 VSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHH 620
+ GH +V L + + S+ ++SG +D + +WD+ + ++
Sbjct: 452 PPHKVLKGHHQSVTSLLYPHGLSSKLDQSW---MLSGDLDSCVILWDIFTEEILHKFFLE 508
Query: 621 VAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVV-WDC 679
PV +++SP + + V D SVAL LE H +P +++ W
Sbjct: 509 AGPVTSLLMSPEKFKLRGEQIICCVCGDHSVALLHLEGKSCLLHARKHL-FPVRMIKWHP 567
Query: 680 PRGYIACLCRDHSRTSDAVDVLFIWDVKTGARER 713
++ C D D ++IW+++TG ER
Sbjct: 568 VENFLIVGCAD--------DSVYIWEIETGTLER 593
>sp|P0CS49|PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PRP46 PE=3
SV=1
Length = 473
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 43/152 (28%)
Query: 573 VLCLAAH-RMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSP 631
+ L H VG K + ++SGSMD ++R+WDL +G + + HH VR + + P
Sbjct: 301 IFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKKSVRALAIHP 360
Query: 632 PQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRG-----YIAC 686
++S A AS +++ W CP G ++
Sbjct: 361 ---------------TEYSFASASSGGNNIKK-------------WKCPEGIFVNNFVGH 392
Query: 687 LCRDHSRTSDAVDVLF---------IWDVKTG 709
++ + ++ +VLF +WD KTG
Sbjct: 393 EAIINTLSINSENVLFSGADNGTLTLWDYKTG 424
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 594 LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL 653
+G+ D I+IWDL SG L + H++ +R + +S HP+ S ED V
Sbjct: 197 FATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVS---DRHPY---LFSCAEDKMVKC 250
Query: 654 ASLETLRVERMFPGH 668
LET +V R + GH
Sbjct: 251 WDLETNKVIRHYHGH 265
>sp|P0CS48|PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PRP46 PE=3 SV=1
Length = 473
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 43/152 (28%)
Query: 573 VLCLAAH-RMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSP 631
+ L H VG K + ++SGSMD ++R+WDL +G + + HH VR + + P
Sbjct: 301 IFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKKSVRALAIHP 360
Query: 632 PQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRG-----YIAC 686
++S A AS +++ W CP G ++
Sbjct: 361 ---------------TEYSFASASSGGNNIKK-------------WKCPEGIFVNNFVGH 392
Query: 687 LCRDHSRTSDAVDVLF---------IWDVKTG 709
++ + ++ +VLF +WD KTG
Sbjct: 393 EAIINTLSINSENVLFSGADNGTLTLWDYKTG 424
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 591 NEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFS 650
N+ +G+ D I+IWDL SG L + H++ +R + +S HP+ S ED
Sbjct: 194 NQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVS---DRHPY---LFSCAEDKM 247
Query: 651 VALASLETLRVERMFPGH 668
V LET +V R + GH
Sbjct: 248 VKCWDLETNKVIRHYHGH 265
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 560 HVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFN---EVLVSGSMDCSIRIWDLGSGNLITV 616
H SR + + V L+ HR G FN ++VSGS+DC+ R+WD+ SG ++V
Sbjct: 243 HDSRLWDVRTGQCVHVLSGHR--GEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSV 300
Query: 617 MHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVV 676
H V + T+ +S D S L T + GH +KV
Sbjct: 301 KQGHTDEVLDVAFDAAGTK------MVSASADGSARLYHTLTGVCQHTLVGHEGEISKVA 354
Query: 677 WDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRG 717
++ P+G R + +SD +WD TG +VL G
Sbjct: 355 FN-PQG-----TRLITASSDK--TCRLWDCDTGECLQVLEG 387
Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 21/160 (13%)
Query: 573 VLCLAAHRMVGTAKGWS--FNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILS 630
V L H+ V A ++ + + +V+GS D + ++WD +G L + H + + +
Sbjct: 129 VFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFN 188
Query: 631 PPQTEHPWSDCFLSVGE-DFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCR 689
P T ++ G D + L +ET + GH + ++ I
Sbjct: 189 PQST-------IIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSF 241
Query: 690 DHSRTSDAVDVLFIWDVKTGARERVL---RGTASHSMFDH 726
DH +WDV+TG VL RG S + F++
Sbjct: 242 DHDSR--------LWDVRTGQCVHVLSGHRGEVSSTQFNY 273
>sp|Q2UGU1|LIS1_ASPOR Nuclear distribution protein nudF OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=nudF PE=3 SV=2
Length = 455
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 29/178 (16%)
Query: 548 HNSPGASLKVNSHVS-------RQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMD 600
+++P + LK N + R H V C+A H + + SGS D
Sbjct: 86 NSTPASRLKRNQDPASWLPSTVRYSLESHRDKVNCVAFHPTFSS---------IASGSDD 136
Query: 601 CSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL-ASLETL 659
C+I+IWD G L + H VR + P+ + C D S+ L +
Sbjct: 137 CTIKIWDWELGELERTLKGHTRAVRDVDYGGPRDNVLLASC----SSDLSIKLWKPTDNY 192
Query: 660 RVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRG 717
+ R GH + + V + R + RD+ + IWDV TG + + G
Sbjct: 193 KNIRTLQGHDHIVSAVRFIPSRNLLVSASRDND--------MRIWDVTTGYCVKTING 242
Score = 37.4 bits (85), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 593 VLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFL-SVGEDFSV 651
+LVS S D +RIWD+ +G + ++ H VR + +S + FL S G+D +
Sbjct: 216 LLVSASRDNDMRIWDVTTGYCVKTINGHTDWVRDVSIS-------FDGRFLFSTGQDMTA 268
Query: 652 ALASLET---LRVERMFPGHPNYPAKVVWDCPRGY--IACLCRDHSRTSDAVDVLFIWDV 706
L + T + +R GH N+ + P Y +A L R S F+
Sbjct: 269 RLWDISTVSNIEHKRTMLGHENFIECCAFAPPTSYQFLAPLAGLGKRPSSTNGADFM--- 325
Query: 707 KTGARERVL-----RGTASHSMFDH 726
TG+R+ + RGT ++ H
Sbjct: 326 ATGSRDNTIKIWDSRGTCLMTLVGH 350
>sp|B8N9H4|LIS1_ASPFN Nuclear distribution protein nudF OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=nudF PE=3 SV=2
Length = 455
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 29/178 (16%)
Query: 548 HNSPGASLKVNSHVS-------RQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMD 600
+++P + LK N + R H V C+A H + + SGS D
Sbjct: 86 NSTPASRLKRNQDPASWLPSTVRYSLESHRDKVNCVAFHPTFSS---------IASGSDD 136
Query: 601 CSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL-ASLETL 659
C+I+IWD G L + H VR + P+ + C D S+ L +
Sbjct: 137 CTIKIWDWELGELERTLKGHTRAVRDVDYGGPRDNVLLASC----SSDLSIKLWKPTDNY 192
Query: 660 RVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRG 717
+ R GH + + V + R + RD+ + IWDV TG + + G
Sbjct: 193 KNIRTLQGHDHIVSAVRFIPSRNLLVSASRDND--------MRIWDVTTGYCVKTING 242
Score = 37.4 bits (85), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 593 VLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFL-SVGEDFSV 651
+LVS S D +RIWD+ +G + ++ H VR + +S + FL S G+D +
Sbjct: 216 LLVSASRDNDMRIWDVTTGYCVKTINGHTDWVRDVSIS-------FDGRFLFSTGQDMTA 268
Query: 652 ALASLET---LRVERMFPGHPNYPAKVVWDCPRGY--IACLCRDHSRTSDAVDVLFIWDV 706
L + T + +R GH N+ + P Y +A L R S F+
Sbjct: 269 RLWDISTVSNIEHKRTMLGHENFIECCAFAPPTSYQFLAPLAGLGKRPSSTNGADFM--- 325
Query: 707 KTGARERVL-----RGTASHSMFDH 726
TG+R+ + RGT ++ H
Sbjct: 326 ATGSRDNTIKIWDSRGTCLMTLVGH 350
>sp|Q5RFQ4|WDR72_PONAB WD repeat-containing protein 72 OS=Pongo abelii GN=WDR72 PE=2 SV=1
Length = 1098
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 504 DFVHKEKIVSSSMVISESFYAPY--AIVYGFFSGEIEVIQ-FDLFERHNSPGASLKVNSH 560
D+ K + + V++ S Y P ++ G G I + Q + + G SL V
Sbjct: 390 DYFSGLKDGAGTAVVTSSEYIPSLDKLICGCEDGTIIITQALNAAKARLLEGGSL-VKDS 448
Query: 561 VSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHH 620
+ GH +V L + + S+ ++SG +D + +WD+ + ++
Sbjct: 449 SPHKVLKGHHQSVTSLLYPHGLSSKLDQSW---MLSGDLDSCVILWDIFTEEILHKFFLE 505
Query: 621 VAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLE----TLRVERMFPGHPNYPAKVV 676
PV +++SP + + + V D SVAL LE LR + +P K++
Sbjct: 506 AGPVTSLLMSPEKFKLRGAQIICCVCSDHSVALLHLEGRSCLLRARKHL-----FPVKMI 560
Query: 677 -WDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARER 713
W ++ C D D ++IW+++TG ER
Sbjct: 561 KWHPVENFLIVGCAD--------DSVYIWEIETGTLER 590
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 39/172 (22%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIAD 68
+W P H +TA + TG +G + W+ S +I +L GHSA +
Sbjct: 10 LWGQKAPPHSITAIMITDDQRMIVTGSQEGQLCLWNLSHE--LKISAKELLFGHSASVTC 67
Query: 69 LSICYPAMVSRDGKAEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRR 128
L+ +RD + + ++SA +G +CVW+ ++G C +
Sbjct: 68 LA------RARDFSKQPY------------------IVSAAENGEMCVWNVTNGQCVEKA 103
Query: 129 KLPPWVGSPSVICTLPSNPRYVCIG---CC-------FIDTNQLSDHHSFES 170
LP + IC + R G CC ID L+ HSF S
Sbjct: 104 TLP---YRHTAICYYHCSFRMTGEGWLLCCGEYQDVLIIDAKTLAVVHSFRS 152
>sp|A8PTE4|MDV1_MALGO Mitochondrial division protein 1 OS=Malassezia globosa (strain ATCC
MYA-4612 / CBS 7966) GN=MDV1 PE=3 SV=1
Length = 674
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 529 VYGFFSGEIEVIQFDLFERHNSPGASL-KVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKG 587
+Y F G ++ F L G L + + + + LGHT + CL
Sbjct: 525 MYTDFVGSVQFWGFALASGSGDGGVRLWDLRTGQAHRTLLGHTAPITCL----------- 573
Query: 588 WSFNEV-LVSGSMDCSIRIWDLGSGNLITVMHH 619
F++ L+SGS+D +IR+WDL SG+++ +H+
Sbjct: 574 -QFDDTHLISGSLDKTIRVWDLRSGHVLETLHY 605
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 582 VGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPV 624
VG+ + W F L SGS D +R+WDL +G + H AP+
Sbjct: 530 VGSVQFWGF--ALASGSGDGGVRLWDLRTGQAHRTLLGHTAPI 570
>sp|Q9FLX9|NLE1_ARATH Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1
Length = 473
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 594 LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL 653
+ S S D S+R+W+ +G +TV HV PV Q+ S S LS +D ++ +
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSAD------SRLLLSGSKDSTLKI 428
Query: 654 ASLETLRVERMFPGHPNYPAKVVW 677
+ T ++++ PGH + V W
Sbjct: 429 WEIRTKKLKQDLPGHADEVFAVDW 452
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 572 AVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILS 630
+++CL+ H + T W + ++ +GS DC+I++W+ G LI + H + + LS
Sbjct: 233 SIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALS 291
>sp|A4R3M4|LIS1_MAGO7 Nuclear distribution protein PAC1 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=PAC1 PE=3 SV=3
Length = 461
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 18/178 (10%)
Query: 542 FDLFERHNSPGASLKVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDC 601
L +R+ P A L R H + C+A H + + + SGS DC
Sbjct: 90 LSLAKRNTDPTAWLPAPR--PRYSLESHQNTINCIAFHPVYSS---------IASGSDDC 138
Query: 602 SIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL-ASLETLR 660
+I+IWD G L + H PV + P+ + C D ++ L + +
Sbjct: 139 TIKIWDWELGELERTIKSHTRPVLDVDFGGPRGGILLASC----SSDLTIKLWDPSDDYK 194
Query: 661 VERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDV-LFIWDVKTGARERVLRG 717
R PGH ++ + P G + S + D+ L IWDV TG + +RG
Sbjct: 195 NIRTLPGH-DHSVSAIRFMPSGASGAAMSGNLLVSASRDMTLKIWDVSTGFCLKTIRG 251
Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 593 VLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVA 652
+LVS S D +++IWD+ +G + + H A +R + P + + LS G+D +V
Sbjct: 225 LLVSASRDMTLKIWDVSTGFCLKTIRGHTAWIRDVY---PSLDGRY---LLSTGDDSTVR 278
Query: 653 LASLETLRVERMFP--GHPNY 671
L L E GH +Y
Sbjct: 279 LWDLSVTNPENRLTMIGHDHY 299
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 555 LKVNSHVSRQYFLGHTGAVLCLAA---------HRMVGTAK---GWSFNEVLVSGSMDCS 602
L V + +R +GH + C A R+ G K S E + SGS D +
Sbjct: 282 LSVTNPENRLTMIGHDHYIECCALAPPSSYPFLSRLAGLKKPPAATSTAEFMASGSRDKT 341
Query: 603 IRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLE 657
I++WD G L+ + H VR ++ HP LSV +D ++ LE
Sbjct: 342 IKLWD-ARGTLLKTLIGHDNWVRALVF------HPGGRYLLSVSDDKTLRCWDLE 389
>sp|B7FNU7|LIS1_PHATC Lissencephaly-1 homolog OS=Phaeodactylum tricornutum (strain CCAP
1055/1) GN=PHATRDRAFT_17300 PE=3 SV=1
Length = 439
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 17/167 (10%)
Query: 545 FERHNSPGASLKVNSHVSRQYFL-GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSI 603
E ++ G + ++ + Q+ L GH+ V C+ H + V+VSGS D S+
Sbjct: 103 LEANDGAGGARRLLPRLPCQHTLQGHSSVVTCVRVHPVF---------TVVVSGSEDGSV 153
Query: 604 RIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVER 663
++WD SG I + H V + +P + S D S+ L +T +
Sbjct: 154 KVWDHESGEYIRTLKGHTNTVNGLAFTPTGSH------LASCSTDLSIKLWDFQTYACIK 207
Query: 664 MFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVD-VLFIWDVKTG 709
GH + + VV+ G + + S + D + +WD++TG
Sbjct: 208 TLRGHDHTISSVVFLPFGGDLLTTTKCKRLLSASRDCTVKVWDLETG 254
Score = 37.4 bits (85), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 589 SFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGED 648
+ + LVSGS D ++R+W + + + V+ H VR +++ HP + LS +D
Sbjct: 334 TVRDYLVSGSRDRTVRLWKVSEASCLMVLKAHDNWVRSVLI------HPNGNYILSSSDD 387
Query: 649 FSVALASLETLRVERMFPGHPNY 671
S+ + ++ R R N+
Sbjct: 388 KSIRVFDIKNERCLRTLENAHNH 410
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 46/167 (27%)
Query: 585 AKGWSFNE----VLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSD 640
AKG +F+ VLV+ +I++WD G L+ H PVR + HP
Sbjct: 14 AKGIAFHPSRPWVLVA-LFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDF------HPTQP 66
Query: 641 CFLSVGEDFSVALASLETLRVERMFPGHPNYPAKV-------------------VWDCP- 680
F+S G+D+++ + SL+T + GH +Y V +W+
Sbjct: 67 IFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQN 126
Query: 681 RGYIACL--------CRDHSRTSDAV------DVLFIWDVKTGARER 713
R IACL C T D + + + IWD+ +G R+R
Sbjct: 127 RKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDI-SGLRKR 172
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 544 LFERHNSPGASLKVNSHVSRQYFL-GHTGAVLCLAAHRMVGTAKG--W-SFNEVL---VS 596
L +RH++PG S ++Q L G G C+ + G +G W SF+ L VS
Sbjct: 169 LRKRHSAPGTSSFEEQMSAQQNLLDGSLGD--CVVKFILEGHTRGVNWASFHPTLPLIVS 226
Query: 597 GSMDCSIRIWDLGSGNL--ITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALA 654
GS D +++W + + + H V +I HP + +SVGED ++ +
Sbjct: 227 GSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIF------HPHQNLIISVGEDKTLRVW 280
Query: 655 SLE 657
L+
Sbjct: 281 DLD 283
>sp|Q4P9P9|LIS1_USTMA Nuclear distribution protein PAC1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=PAC1 PE=3 SV=1
Length = 453
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 592 EVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSV 651
+ + +GS D +IRIWD SG + + H VR + SP LSV +D ++
Sbjct: 329 QFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLAFSPN------GKSLLSVSDDKTM 382
Query: 652 ALASLETLRVERMFPGHPNYPAKVVW 677
L L++ R R H ++ + W
Sbjct: 383 RLWDLQSGRCTRTIEAHQHFATGIAW 408
>sp|B6QC56|LIS11_PENMQ Nuclear distribution protein nudF 1 OS=Penicillium marneffei
(strain ATCC 18224 / CBS 334.59 / QM 7333) GN=nudF-1
PE=3 SV=1
Length = 459
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 26/176 (14%)
Query: 544 LFERHNSPGASLKVNSHVSRQYFL-GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCS 602
L +R+ P + L V +Y L H + CLA H + + SGS DC
Sbjct: 92 LSKRNQDPASWL---PKVPARYSLESHRNTINCLAFHPKFSS---------IASGSDDCM 139
Query: 603 IRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALAS-LETLRV 661
I+IWD G L T + H V + Q+ + C D S+ + + LE +
Sbjct: 140 IKIWDWELGELETTLKGHTRAVLDVDYGNTQSGVLLASC----SSDLSIKIWNPLEDYKN 195
Query: 662 ERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRG 717
R GH + + V + R + RD L IWDV TG + ++G
Sbjct: 196 IRTLLGHEHSVSAVRFIPGRNLLTSASRDKD--------LRIWDVTTGFCVKTIQG 243
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 43/172 (25%)
Query: 583 GTAKGWSF---NEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWS 639
G G +F N+ L+S S D S R+W + + + H PV + P+
Sbjct: 380 GPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFG------PFG 433
Query: 640 DCFLSVGEDFSVALASLETLRVERMFPG----------HPNYPAKV---------VWDCP 680
F + D + L S + + R+F G HPN + +WD
Sbjct: 434 HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVH 493
Query: 681 RGYIACLCRDHSR---------------TSDAVDVLFIWDVKTGARERVLRG 717
RG+ + H++ ++D+ ++ +WD+ TG R + +RG
Sbjct: 494 RGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRG 545
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 566 FLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVR 625
F GH V C+ H + +++GS D + R+WD+ G+ + V + H PV
Sbjct: 459 FAGHLSDVDCVTFH---------PNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVT 509
Query: 626 QIILSP 631
+ ++P
Sbjct: 510 AVAIAP 515
>sp|C5JD40|LIS1_AJEDS Nuclear distribution protein PAC1 OS=Ajellomyces dermatitidis
(strain SLH14081) GN=PAC1 PE=3 SV=1
Length = 473
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 593 VLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVA 652
+LVS S D ++RIWD+ +G + +H HV VR ++ SP S G+D
Sbjct: 224 LLVSASRDKTLRIWDVTTGYCVRTLHGHVEWVRDVVPSPD------GRFLFSAGDDRVAR 277
Query: 653 LASLETLRVERMFPGHPNYPAKVVWDCPRGY-----IACLCRDHSRTSDAVDVLFIWDVK 707
L + + + F GH ++ V P Y +A L + +S A V
Sbjct: 278 LWDVSSGETKSTFLGHEHFIECVALAPPTTYPYLAALAGLKKPPPPSSSAE------YVA 331
Query: 708 TGARERVLR 716
TG+R++ +R
Sbjct: 332 TGSRDKTIR 340
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 594 LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL 653
L SGS D +I+IWD G L + H V + P S D ++ L
Sbjct: 130 LASGSEDTTIKIWDWELGELERTIKGHTRAVVDVDYGGPHG----GTLLASCSSDLTIKL 185
Query: 654 -ASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVD-VLFIWDVKTGAR 711
+ + R PGH ++ V P G + S + D L IWDV TG
Sbjct: 186 WDPSDEYKNIRTLPGH-DHSVSAVRFIPSGAAGSPLSGNLLVSASRDKTLRIWDVTTGYC 244
Query: 712 ERVLRG 717
R L G
Sbjct: 245 VRTLHG 250
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 557 VNSHVSRQYFLGHTGAVLCLA-----AHRMVGTAKGW-------SFNEVLVSGSMDCSIR 604
V+S ++ FLGH + C+A + + G S E + +GS D +IR
Sbjct: 281 VSSGETKSTFLGHEHFIECVALAPPTTYPYLAALAGLKKPPPPSSSAEYVATGSRDKTIR 340
Query: 605 IWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSV 651
+WD G LI + H VR ++ HP LSV +D ++
Sbjct: 341 VWD-SRGTLIKTLIGHDNWVRALVF------HPGGKYLLSVSDDKTI 380
>sp|C5GVJ9|LIS1_AJEDR Nuclear distribution protein PAC1 OS=Ajellomyces dermatitidis
(strain ER-3 / ATCC MYA-2586) GN=PAC1 PE=3 SV=1
Length = 473
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 593 VLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVA 652
+LVS S D ++RIWD+ +G + +H HV VR ++ SP S G+D
Sbjct: 224 LLVSASRDKTLRIWDVTTGYCVRTLHGHVEWVRDVVPSPD------GRFLFSAGDDRVAR 277
Query: 653 LASLETLRVERMFPGHPNYPAKVVWDCPRGY-----IACLCRDHSRTSDAVDVLFIWDVK 707
L + + + F GH ++ V P Y +A L + +S A V
Sbjct: 278 LWDVSSGETKSTFLGHEHFIECVALAPPTTYPYLAALAGLKKPPPPSSSAE------YVA 331
Query: 708 TGARERVLR 716
TG+R++ +R
Sbjct: 332 TGSRDKTIR 340
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 594 LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVAL 653
L SGS D +I+IWD G L + H V + P S D ++ L
Sbjct: 130 LASGSEDTTIKIWDWELGELERTIKGHTRAVVDVDYGGPHG----GTLLASCSSDLTIKL 185
Query: 654 -ASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVD-VLFIWDVKTGAR 711
+ + R PGH ++ V P G + S + D L IWDV TG
Sbjct: 186 WDPSDEYKNIRTLPGH-DHSVSAVRFIPSGAAGSPLSGNLLVSASRDKTLRIWDVTTGYC 244
Query: 712 ERVLRG 717
R L G
Sbjct: 245 VRTLHG 250
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 557 VNSHVSRQYFLGHTGAVLCLA-----AHRMVGTAKGW-------SFNEVLVSGSMDCSIR 604
V+S ++ FLGH + C+A + + G S E + +GS D +IR
Sbjct: 281 VSSGETKSTFLGHEHFIECVALAPPTTYPYLAALAGLKKPPPPSSSAEYVATGSRDKTIR 340
Query: 605 IWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSV 651
+WD G LI + H VR ++ HP LSV +D ++
Sbjct: 341 VWD-SRGTLIKTLIGHDNWVRALVF------HPGGKYLLSVSDDKTI 380
>sp|Q0CY32|SCONB_ASPTN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=sconB PE=3 SV=1
Length = 673
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 35/141 (24%)
Query: 529 VYGFFSGEIEVIQFDLFER-HNSPGASLKVNSHVSRQ---YFLGHTGAVL-------CLA 577
+YG SG I +QFD + S SLKV + + + + GH G V+ LA
Sbjct: 380 LYGHESG-IRCLQFDDTKLISGSMDRSLKVWNWRTGECISTYTGHRGGVIGLHFDATILA 438
Query: 578 AHRMVGTAKGWSFNE-----------------------VLVSGSMDCSIRIWDLGSGNLI 614
+ + T K W+F + + S S DC++R+WDL + I
Sbjct: 439 SASVDKTVKIWNFEDKSTCLLRGHTDWVNAVRVDTTSRTVFSASDDCTVRLWDLDTKQCI 498
Query: 615 TVMHHHVAPVRQIILSPPQTE 635
H HV V+Q+I P + E
Sbjct: 499 RTFHGHVGQVQQVIPLPREFE 519
Score = 40.4 bits (93), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 562 SRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHV 621
S + F GHT V+CL + +L +GS D +I+IWD +G + ++ H
Sbjct: 336 STKIFKGHTNGVMCLQFE-----------DNILATGSYDATIKIWDTETGEELRTLYGHE 384
Query: 622 APVR 625
+ +R
Sbjct: 385 SGIR 388
>sp|P25382|NLE1_YEAST Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3
Length = 515
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 594 LVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFL--SVGEDFSV 651
+VS S D SI++WD G I+ HVA V Q+ S SDC L S +D ++
Sbjct: 417 IVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWS--------SDCRLLVSCSKDTTL 468
Query: 652 ALASLETLRVERMFPGHPNYPAKVVW 677
+ + T ++ PGH + V W
Sbjct: 469 KVWDVRTRKLSVDLPGHKDEVYTVDW 494
Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFN-EVLVSGSMDCSIRIWDLGSGN-LITVMHHHVAPVR 625
GH VLC++ WS + EV+ +GSMD +IR+WD SG L + H +
Sbjct: 184 GHYNWVLCVS----------WSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWIT 233
Query: 626 QIILSPPQTEHPWSDCFL-SVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYI 684
+ P P S L S +D ++ + + + GH N + V W G
Sbjct: 234 SLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG---GQG 290
Query: 685 ACLCRDHSRTSDAVDVLFIWDVKTGAR 711
H RT + +WD+ + R
Sbjct: 291 LLYSGSHDRT------VRVWDINSQGR 311
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 20/132 (15%)
Query: 564 QYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAP 623
Q++ H V C + H L+SGS D +I+I DL G LI +H H P
Sbjct: 222 QHYKVHNAGVNCFSFH---------PSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGP 272
Query: 624 VRQIILSPPQTEHPWSDCFLSVGEDFSVAL--ASLETLRVERMFPGHPNYPAKVVWDCPR 681
V + S D F S G D V + + ++L + H +V D P
Sbjct: 273 VLTVTFSRD------GDLFASGGADSQVLMWKTNFDSLNYRELLSKHSK---RVTPDPPP 323
Query: 682 GYIACLCRDHSR 693
+ R H R
Sbjct: 324 HLMDIYPRSHHR 335
>sp|Q9GZS3|WDR61_HUMAN WD repeat-containing protein 61 OS=Homo sapiens GN=WDR61 PE=1 SV=1
Length = 305
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 28/155 (18%)
Query: 592 EVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSV 651
+ L SG++D I I+D+ +G L+ + H P+R + SP S ++ +D +
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD------SQLLVTASDDGYI 214
Query: 652 ALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGAR 711
+ ++ + GH ++ V + CP H +S + + +WDV G R
Sbjct: 215 KIYDVQHANLAGTLSGHASWVLNVAF-CPD-------DTHFVSSSSDKSVKVWDV--GTR 264
Query: 712 ERVLRGTASHSMFDHFCKGISMNSISGSVLNGNTS 746
T H+ FDH + + G NGN S
Sbjct: 265 ------TCVHTFFDH------QDQVWGVKYNGNGS 287
>sp|Q32LN7|WDR61_BOVIN WD repeat-containing protein 61 OS=Bos taurus GN=WDR61 PE=2 SV=1
Length = 305
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 28/155 (18%)
Query: 592 EVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSV 651
+ L SG++D I I+D+ +G L+ + H P+R + SP S ++ +D +
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD------SQLLVTASDDGYI 214
Query: 652 ALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGAR 711
+ ++ + GH ++ V + CP H +S + + +WDV G R
Sbjct: 215 KIYDVQHANLAGTLSGHASWVLNVAF-CPD-------DTHFVSSSSDKSVKVWDV--GTR 264
Query: 712 ERVLRGTASHSMFDHFCKGISMNSISGSVLNGNTS 746
T H+ FDH + + G NGN S
Sbjct: 265 ------TCVHTFFDH------QDQVWGVKYNGNGS 287
>sp|Q9ERF3|WDR61_MOUSE WD repeat-containing protein 61 OS=Mus musculus GN=Wdr61 PE=2 SV=1
Length = 305
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 28/155 (18%)
Query: 592 EVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSV 651
+ L SG++D I I+D+ +G L+ + H P+R + SP S ++ +D +
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD------SQLLVTASDDGYI 214
Query: 652 ALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGAR 711
+ ++ + GH ++ V + CP H +S + + +WDV G R
Sbjct: 215 KIYDVQHANLAGTLSGHASWVLNVAF-CPD-------DTHFVSSSSDKSVKVWDV--GTR 264
Query: 712 ERVLRGTASHSMFDHFCKGISMNSISGSVLNGNTS 746
T H+ FDH + + G NGN S
Sbjct: 265 ------TCIHTFFDH------QDQVWGVKYNGNGS 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,022,550
Number of Sequences: 539616
Number of extensions: 20003349
Number of successful extensions: 46937
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 44964
Number of HSP's gapped (non-prelim): 2073
length of query: 1288
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1159
effective length of database: 121,958,995
effective search space: 141350475205
effective search space used: 141350475205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)