Query 000781
Match_columns 1288
No_of_seqs 472 out of 4709
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 15:56:38 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000781.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_553-557//hhsearch_pdb/000781hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 381.9 50.6 545 14-767 613-1158(1249)
2 2ymu_A WD-40 repeat protein; u 1.0 1 1 379.6 66.7 552 14-764 14-577 (577)
3 1nr0_A Actin interacting prote 1.0 1 1 350.1 63.6 578 5-766 5-610 (611)
4 2ymu_A WD-40 repeat protein; u 1.0 1 1 347.2 60.3 176 480-705 402-577 (577)
5 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 341.5 45.9 532 14-767 655-1207(1249)
6 1pgu_A Actin interacting prote 1.0 1 1 336.0 57.6 556 6-766 6-613 (615)
7 1nr0_A Actin interacting prote 1.0 1 1 326.9 59.2 532 6-707 40-610 (611)
8 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 318.6 52.9 592 14-767 15-732 (902)
9 1pgu_A Actin interacting prote 1.0 1 1 307.9 53.9 498 15-709 62-615 (615)
10 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 286.1 61.7 609 6-771 40-787 (902)
No 1
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=381.87 Aligned_cols=545 Identities=15% Similarity=0.105 Sum_probs=333.6
Q ss_pred CCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99820799998179996999958887999985678998300159840346456895741454202574322111125676
Q 000781 14 PPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIADLSICYPAMVSRDGKAEHWKAENSSN 93 (1288)
Q Consensus 14 ~p~h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~Vt~L~~~s~~~~~~~~~~~~~~~~~~~~ 93 (1288)
++...|+|++|+||+++|++|+.||.|++||+.+ ......+.+|..+|++++|
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~-----~~~~~~~~~h~~~v~~~~~---------------------- 665 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAET-----GEKLLDIKAHEDEVLCCAF---------------------- 665 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CCEEEEECCCSSCEEEEEE----------------------
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC-----CCEEEEECCCCCCEEEEEE----------------------
T ss_conf 6666489999879999899994889499999899-----9788876067777899999----------------------
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 34555699987999828990999988998069974089986889603541789982599995325776666665432235
Q 000781 94 VMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTNQLSDHHSFESVEG 173 (1288)
Q Consensus 94 ~~~~~s~d~~~LvS~S~DG~I~iWdl~sG~c~~~~~l~~~~~~~t~I~~l~~~~~~~~l~c~g~~~~~~~~~~~~~~~~g 173 (1288)
++++.+|++++.||+|++||+.+|+++.....+ ..+.....+....+...+.+.+
T Consensus 666 -----s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~sg~----------------- 720 (1249)
T 3sfz_A 666 -----SSDDSYIATCSADKKVKIWDSATGKLVHTYDEH---SEQVNCCHFTNKSNHLLLATGS----------------- 720 (1249)
T ss_dssp -----CTTSSEEEEEETTSEEEEEETTTCCEEEEEECC---SSCEEEEEECSSSSCCEEEEEE-----------------
T ss_pred -----ECCCCEEEEEECCCEEEEEECCCCCEEEEECCC---CCCEEEEEEECCCCCEEEEEEE-----------------
T ss_conf -----269998999818995999877999368999589---9737999984089965999980-----------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCC
Q ss_conf 42223466788899974199995678449999952543348731899982167787314899965983899950368755
Q 000781 174 DLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHGNLSIGPWKFMDVVSLGEDMGKHYGLMVDSVGRLQLVPISKESHL 253 (1288)
Q Consensus 174 ~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi~~~~s~~l~~~pis~l~v~~~~~~~~~~~~lls~s~dg~ikvW~l~~~~~ 253 (1288)
.++.|.+||..+.+.+.++.. +.+++.+++|.+. +..+++++.|+.+++|++.....
T Consensus 721 --------------~d~~v~vwd~~~~~~~~~~~~---h~~~v~~~~~sp~------~~~l~s~s~dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 721 --------------NDFFLKLWDLNQKECRNTMFG---HTNSVNHCRFSPD------DELLASCSADGTLRLWDVRSANE 777 (1249)
T ss_dssp --------------TTSCEEEEETTSSSEEEEECC---CSSCEEEEEECSS------TTEEEEEESSSEEEEEEGGGTEE
T ss_pred --------------CCCEEEEEECCCCCHHHEECC---CCCCEEEEEEECC------CCEEEEEECCCEEEEEECCCCCC
T ss_conf --------------897099998999634220127---7797889999259------99899997898599996888865
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCE-EEEECCCCCCCCEEEEEECCEEECCCCCCCC
Q ss_conf 444577633357655404750673247139999407988999966943-7840478852121443204223207888752
Q 000781 254 DREEGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDHC-IFRLLGSGSTIGEICFVDNLFCLEGGSTNSY 332 (1288)
Q Consensus 254 ~~~~~~~l~~~~~~~~~i~~~~~~~~~v~~Is~s~dg~~i~lv~~~~~-i~~~l~~~~~~g~~s~~~~ll~~~~~~~~~~ 332 (1288)
........+.. ............+..++++++++.++....... +|+. .++.....+ .......
T Consensus 778 ~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~-~~~~~~~~~----------~~~~~~~ 842 (1249)
T 3sfz_A 778 RKSINVKRFFL----SSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDI-HTSGLLAEI----------HTGHHST 842 (1249)
T ss_dssp EEEEECCCCC------------CCCCCBCCCCBCTTSSEEEEEETTEEEEEET-TTCCEEEEE----------ECSSSSC
T ss_pred CCEECCCCCCC----CCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEE-CCCCCEEEE----------CCCCCCC
T ss_conf 53020232102----46776445650179999978998899975895999995-689723577----------4787776
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEE
Q ss_conf 38889911132000013455235553059999589979999972787645568852237645889970259884124248
Q 000781 333 VIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIVYAISYMNEKFDYEPHFEIPAVSYPSGVKFSIHFIQMSLYL 412 (1288)
Q Consensus 333 ~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~dG~~~iy~l~~~~~~~~~~~l~~i~~~~~~~~~~~~v~f~~~~~~L 412 (1288)
+....|...+. .+++++.+|.+++|++..+...... .........+.|.+.+.++
T Consensus 843 v~~~~~sp~~~----------------~l~~~~~dg~v~vwd~~~~~~~~~~---------~~h~~~v~~v~~spdg~~l 897 (1249)
T 3sfz_A 843 IQYCDFSPYDH----------------LAVIALSQYCVELWNIDSRLKVADC---------RGHLSWVHGVMFSPDGSSF 897 (1249)
T ss_dssp CCEEEECSSTT----------------EEEEECSSSCEEEEETTTTEEEEEE---------CCCSSCEEEEEECTTSSEE
T ss_pred EEEEEECCCCC----------------EEEEEECCCEEEEEECCCCCEEEEC---------CCCCCCEEEEEECCCCCEE
T ss_conf 07999827888----------------8999947986999986789565322---------7876656899998999989
Q ss_pred EEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99531000233455446718999545678999963049961376201103765457787864576633434584015455
Q 000781 413 LRMETVCFHVEETSQWRPYISVWSLSQKHSGPGKQCRMVGEGFSFVDWVNNSTFLDENEGSCTGKSDLTFCQDTVPRSEH 492 (1288)
Q Consensus 413 ~~v~s~~~~~~~~l~~~p~i~iwsl~~~~~~~~~~~k~l~sG~~~g~W~~~~~~~~~~~g~~~~~l~~s~~~s~~~lWd~ 492 (1288)
+... .+.. +++|++.............-.. ..+..+.. .+...........|..
T Consensus 898 ~s~s-----~dg~------v~vw~~~~~~~~~~~~~~~~~~----~~~~~~~~-----------~~~~~~~~~~~~~~~~ 951 (1249)
T 3sfz_A 898 LTAS-----DDQT------IRVWETKKVCKNSAIVLKQEID----VVFQENET-----------MVLAVDNIRGLQLIAG 951 (1249)
T ss_dssp EEEE-----TTSC------EEEEEHHHHHSCCSSSEEEEEE----EEEETTEE-----------EEEEEESSSSEEEEEE
T ss_pred EEEE-----CCCE------EEEEECCCCCEEEEECCCCEEE----EEECCCCC-----------EEEEECCCCCEEEEEC
T ss_conf 9995-----8972------8988746652010211331036----89759986-----------8998137762489844
Q ss_pred CCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 68898899601022499838998853057635887999980792999992366668999885445875068999238867
Q 000781 493 VDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDLFERHNSPGASLKVNSHVSRQYFLGHTGA 572 (1288)
Q Consensus 493 ~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs~dG~I~i~~~d~~~~~~~~~~~~d~~t~~~~~~l~gH~~~ 572 (1288)
... .. ...+...++++.+.++..+ +++|+.+|.|.+|+ ..+++....+.+|.+.
T Consensus 952 ~~~----~~---~~~~~~~i~~~~~sp~g~~----l~~g~~~g~i~i~d---------------~~~~~~~~~~~~h~~~ 1005 (1249)
T 3sfz_A 952 KTG----QI---DYLPEAQVSCCCLSPHLEY----VAFGDEDGAIKIIE---------------LPNNRVFSSGVGHKKA 1005 (1249)
T ss_dssp SSC----CE---EEECCSCEEEEEECTTSSE----EEEEETTSCCEEEE---------------TTTTSCEEECCCCSSC
T ss_pred CCC----EE---EECCCCCEEEEEECCCCCE----EEEECCCCCEEEEE---------------CCCCCEEEECCCCCCC
T ss_conf 765----08---9725672789999589977----99986999889997---------------5787234430367771
Q ss_pred EEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEE
Q ss_conf 79999821245888876674999997999399993899716999800586789999799999999999999997999099
Q 000781 573 VLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVA 652 (1288)
Q Consensus 573 V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~tg~~l~~l~~H~~~V~sv~~sP~~~~~~~~~~ivSgs~D~sV~ 652 (1288)
|++++| +|+| +++++++.|++|++||+.+++.. .+..|...|.++.|+|+ ..+++++.|++|+
T Consensus 1006 v~~l~~-----s~dg----~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~v~~~~~~~~-------~~l~~~~~dg~v~ 1068 (1249)
T 3sfz_A 1006 VRHIQF-----TADG----KTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRLLQD-------SRLLSWSFDGTVK 1068 (1249)
T ss_dssp CCCEEE-----CSSS----SCEEEECSSSBEEEEETTTTEEE-CCBCCSSCEEEEEECSS-------SEEEEEESSSEEE
T ss_pred EEEEEE-----CCCC----CEEEEECCCCEEEEEECCCCCEE-EEECCCCCEEEEEECCC-------CCEEEEECCCCEE
T ss_conf 689999-----8999----98999869987999987999668-98527873899999089-------9589997889689
Q ss_pred EEECCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 99789860689941799994899995999999997348874359998599998999918999928997557743322763
Q 000781 653 LASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGIS 732 (1288)
Q Consensus 653 IWdl~t~~~i~~l~gH~~~V~~I~~sp~~~~Litg~~D~s~ssD~DgtI~IWDl~tg~l~~~l~gH~~~vi~~~~~~~~~ 732 (1288)
+||+.+++++..+.+|...|++++|+|++.++++++. |++|++||+.++++...+.+|...+..+.|++...
T Consensus 1069 vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~--------d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~ 1140 (1249)
T 3sfz_A 1069 VWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSA--------DKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGI 1140 (1249)
T ss_dssp EEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECC--------SSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSS
T ss_pred EEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECC--------CCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCC
T ss_conf 9888988655887466884899999899998999849--------99489987898500125506877679999979999
Q ss_pred CEEEECCEEECCCCCCCCCEEECCCCCEEEEECCC
Q ss_conf 20000634507500257831000599679995875
Q 000781 733 MNSISGSVLNGNTSVSSLLLPIHEDGTFRQSQIQN 767 (1288)
Q Consensus 733 ~~~~sgs~~~g~~~~s~~l~~~~~D~tir~w~~~~ 767 (1288)
.. +....|+++++|++..
T Consensus 1141 -~l----------------at~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1141 -LL----------------ATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp -EE----------------EEEETTSCCCEEESSS
T ss_pred -EE----------------EEEECCCEEEEEECCC
T ss_conf -89----------------9982899799998899
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=379.62 Aligned_cols=552 Identities=16% Similarity=0.168 Sum_probs=384.2
Q ss_pred CCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99820799998179996999958887999985678998300159840346456895741454202574322111125676
Q 000781 14 PPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIADLSICYPAMVSRDGKAEHWKAENSSN 93 (1288)
Q Consensus 14 ~p~h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~Vt~L~~~s~~~~~~~~~~~~~~~~~~~~ 93 (1288)
.++..|+|++|+|||++||||+.|+.|++||.. .+++..+.||+++|++++ +
T Consensus 14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~------~~~~~~l~gh~~~V~~l~---f------------------- 65 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------GQLLQTLTGHSSSVWGVA---F------------------- 65 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT------SCEEEEEECCSSCEEEEE---E-------------------
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEECC------CCEEEEEECCCCCEEEEE---E-------------------
T ss_conf 899857999998998999999389989999799------978999968989989999---9-------------------
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCC-CC--------
Q ss_conf 345556999879998289909999889980699740899868896035417899825999953257766-66--------
Q 000781 94 VMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTNQL-SD-------- 164 (1288)
Q Consensus 94 ~~~~~s~d~~~LvS~S~DG~I~iWdl~sG~c~~~~~l~~~~~~~t~I~~l~~~~~~~~l~c~g~~~~~~-~~-------- 164 (1288)
+||+.+|++++.|++|++||+ +|+++.....+ .. .|..+.-++....+.+.+.|.... .+
T Consensus 66 -----spdg~~las~~~d~~i~vWd~-~~~~~~~~~~~---~~--~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~ 134 (577)
T 2ymu_A 66 -----SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH---SS--SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT 134 (577)
T ss_dssp -----CTTSSEEEEEETTSCEEEEET-TSCEEEEECCC---SS--CEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEE
T ss_pred -----CCCCCEEEEEECCCEEEEEEC-CCCEEEEEECC---CC--CEEEEEECCCCCEEEEECCCCCEEECCCCCCEEEE
T ss_conf -----899999999969897999989-99789999789---99--88999998999989998079833520235520011
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEE
Q ss_conf -6654322354222346678889997419999567844999995254334873189998216778731489996598389
Q 000781 165 -HHSFESVEGDLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHGNLSIGPWKFMDVVSLGEDMGKHYGLMVDSVGRLQ 243 (1288)
Q Consensus 165 -~~~~~~~~g~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi~~~~s~~l~~~pis~l~v~~~~~~~~~~~~lls~s~dg~i 243 (1288)
......+.......+............+.+++.... ....... +..++.++++... ...+++++.|+.+
T Consensus 135 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~v~~~~~~~~------~~~l~~~~~d~~v 204 (577)
T 2ymu_A 135 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-LLQTLTG---HSSSVWGVAFSPD------GQTIASASDDKTV 204 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC-EEEEEEC---CSSCEEEEEECTT------SSCEEEEETTSEE
T ss_pred CCCCCCCEEEEEEECCCCCCEECCCCCCEECCCCCEE-EEEECCC---CCCCEEEEEECCC------CCEEEEECCCCEE
T ss_conf 0477774355542037763200255531000000000-0000268---7763566541699------7789998599989
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCE--EEEECCCCCCCCEEEEEECC
Q ss_conf 9950368755444577633357655404750673247139999407988999966943--78404788521214432042
Q 000781 244 LVPISKESHLDREEGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDHC--IFRLLGSGSTIGEICFVDNL 321 (1288)
Q Consensus 244 kvW~l~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~v~~Is~s~dg~~i~lv~~~~~--i~~~l~~~~~~g~~s~~~~l 321 (1288)
++|+.... .+..+..+...+..++++++++.++.+..++. +|+. .++.+..+
T Consensus 205 ~~w~~~~~------------------~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~--~~~~~~~~------ 258 (577)
T 2ymu_A 205 KLWNRNGQ------------------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTL------ 258 (577)
T ss_dssp EEECTTSC------------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT--TSCEEEEE------
T ss_pred EEEECCCC------------------EEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC--CCCEEEEE------
T ss_conf 99949996------------------89999468898899999799999999918998999959--99799998------
Q ss_pred EEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 23207888752388899111320000134552355530599995899799999727876455688522376458899702
Q 000781 322 FCLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIVYAISYMNEKFDYEPHFEIPAVSYPSGVKF 401 (1288)
Q Consensus 322 l~~~~~~~~~~~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~dG~~~iy~l~~~~~~~~~~~l~~i~~~~~~~~~~~ 401 (1288)
..+ ...+....|.+++. .+++.+.++.+++|+... ........+.....
T Consensus 259 ---~~~--~~~v~~v~~~~d~~----------------~l~~~~~d~~i~~w~~~~----------~~~~~~~~h~~~v~ 307 (577)
T 2ymu_A 259 ---TGH--SSSVNGVAFRPDGQ----------------TIASASDDKTVKLWNRNG----------QLLQTLTGHSSSVW 307 (577)
T ss_dssp ---CCC--SSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTS----------CEEEEECCCSSCEE
T ss_pred ---ECC--CCCEEEEEECCCCC----------------EEEEEECCCEEEEEECCC----------CEEEEEECCCCCEE
T ss_conf ---068--89879999968999----------------999995999799994899----------58999706889769
Q ss_pred EEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 59884124248995310002334554467189995456789999630499613762011037654577878645766334
Q 000781 402 SIHFIQMSLYLLRMETVCFHVEETSQWRPYISVWSLSQKHSGPGKQCRMVGEGFSFVDWVNNSTFLDENEGSCTGKSDLT 481 (1288)
Q Consensus 402 ~v~f~~~~~~L~~v~s~~~~~~~~l~~~p~i~iwsl~~~~~~~~~~~k~l~sG~~~g~W~~~~~~~~~~~g~~~~~l~~s 481 (1288)
.+.|.+.+.+++... .+.. +++|.+... ....+ .+.....+.+ ...+++. .+...
T Consensus 308 ~~~~~~~~~~l~t~~-----~d~~------i~~w~~~~~------~~~~~-~~~~~~v~~~----~~s~~g~---~l~~~ 362 (577)
T 2ymu_A 308 GVAFSPDGQTIASAS-----DDKT------VKLWNRNGQ------HLQTL-TGHSSSVWGV----AFSPDGQ---TIASA 362 (577)
T ss_dssp EEEECTTSSEEEEEE-----TTSC------EEEEETTSC------EEEEE-CCCSSCEEEE----EECTTSS---EEEEE
T ss_pred EEEECCCCCEEEEEE-----CCCE------EEEEECCCC------EEEEE-ECCCCCEEEE----EECCCCC---EEEEE
T ss_conf 999999999999996-----9995------999969997------25787-4788977999----9989999---99999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCE
Q ss_conf 34584015455688988996010224998389988530576358879999807929999923666689998854458750
Q 000781 482 FCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDLFERHNSPGASLKVNSHV 561 (1288)
Q Consensus 482 ~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs~dG~I~i~~~d~~~~~~~~~~~~d~~t~~ 561 (1288)
..++.+++|+.. +.....+.+|...|+++.|.++..+ +++++.|+.|++|+ . +++
T Consensus 363 ~~dg~v~~~~~~-----~~~~~~~~~~~~~v~~~~~s~dg~~----l~~~~~d~~v~~~~---------------~-~~~ 417 (577)
T 2ymu_A 363 SDDKTVKLWNRN-----GQLLQTLTGHSSSVRGVAFSPDGQT----IASASDDKTVKLWN---------------R-NGQ 417 (577)
T ss_dssp ETTSEEEEEETT-----CCEEEEEECCSSCEEEEEECTTSSC----EEEEETTSEEEEEC---------------T-TCC
T ss_pred ECCCEEEEECCC-----CCEEEEECCCCCCEEEEEECCCCCE----EEEEECCCEEEEEE---------------C-CCC
T ss_conf 699989999089-----9789985278897489999899999----99994999899996---------------9-997
Q ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCE
Q ss_conf 68999238867799998212458888766749999979993999938997169998005867899997999999999999
Q 000781 562 SRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDC 641 (1288)
Q Consensus 562 ~~~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~tg~~l~~l~~H~~~V~sv~~sP~~~~~~~~~~ 641 (1288)
....+.+|...|++++| +||+ +++++++.|++|++||. +++.+..+.+|...|++++|+|+ +++
T Consensus 418 ~~~~~~~~~~~v~~~~~-----s~d~----~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd------~~~ 481 (577)
T 2ymu_A 418 LLQTLTGHSSSVWGVAF-----SPDD----QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD------GQT 481 (577)
T ss_dssp EEEEEECCSSCEEEEEE-----CTTS----SEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT------SCE
T ss_pred EEEEECCCCCCEEEEEE-----CCCC----CEEEEECCCCEEEEEEC-CCCEEEEECCCCCCEEEEEECCC------CCE
T ss_conf 89896288997579999-----8999----99999939998999979-99889997278997789999699------999
Q ss_pred EEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCC
Q ss_conf 99997999099997898606899417999948999959999999973488743599985999989999189999289975
Q 000781 642 FLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASH 721 (1288)
Q Consensus 642 ivSgs~D~sV~IWdl~t~~~i~~l~gH~~~V~~I~~sp~~~~Litg~~D~s~ssD~DgtI~IWDl~tg~l~~~l~gH~~~ 721 (1288)
+++++.|++|++||. +++++..+.+|...|++++|+|++++|++++. |+.|++||. ++++++++.||...
T Consensus 482 las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~--------dg~v~lwd~-~~~~~~~~~~h~~~ 551 (577)
T 2ymu_A 482 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD--------DKTVKLWNR-NGQLLQTLTGHSSS 551 (577)
T ss_dssp EEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET--------TSEEEEECT-TSCEEEEEECCSSC
T ss_pred EEEEECCCEEEEECC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEEC--------CCEEEEEEC-CCCEEEEECCCCCC
T ss_conf 999919897999939-99789998679999899999189999999989--------699999969-99789897188888
Q ss_pred EEEEEEECCCCCEEEECCEEECCCCCCCCCEEECCCCCEEEEE
Q ss_conf 5774332276320000634507500257831000599679995
Q 000781 722 SMFDHFCKGISMNSISGSVLNGNTSVSSLLLPIHEDGTFRQSQ 764 (1288)
Q Consensus 722 vi~~~~~~~~~~~~~sgs~~~g~~~~s~~l~~~~~D~tir~w~ 764 (1288)
+..+.|.++.. .++....|+++|+|+
T Consensus 552 v~~~~fs~dg~-----------------~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 552 VWGVAFSPDGQ-----------------TIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECTTSS-----------------CEEEEETTSCEEEEC
T ss_pred EEEEEECCCCC-----------------EEEEEECCCEEEEEC
T ss_conf 78999968999-----------------999990899999969
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=350.06 Aligned_cols=578 Identities=10% Similarity=0.038 Sum_probs=339.8
Q ss_pred EEEEEECCCCCC--CEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 357980899998--207999981799969999588879999856789983001598403464568957414542025743
Q 000781 5 SVACIWSGTPPS--HRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIADLSICYPAMVSRDGK 82 (1288)
Q Consensus 5 ~~~~lw~~~~p~--h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~Vt~L~~~s~~~~~~~~~ 82 (1288)
...-.|.+.|.+ ..+.+++|+|||++|++++ ++.|++|++.+ ......+.||+.+|++++ +
T Consensus 5 ~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~-----~~~~~~~~~h~~~v~~~~---~-------- 67 (611)
T 1nr0_A 5 SQTALFPSLPRTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS-----LTDTEIYTEHSHQTTVAK---T-------- 67 (611)
T ss_dssp EEEEEECCCCCCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTC-----SSCCEEECCCSSCEEEEE---E--------
T ss_pred CCCCEECCCCCCCCCCEEEEEECCCCCEEEECC-CCEEEEECCCC-----CCCCEEECCCCCCEEEEE---E--------
T ss_conf 116279899974068236976679999799679-99799945787-----242737658998659999---9--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEE--EEEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCC
Q ss_conf 221111256763455569998799982899099998899806--997408998688960354178998259999532577
Q 000781 83 AEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRSSGHC--RRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTN 160 (1288)
Q Consensus 83 ~~~~~~~~~~~~~~~~s~d~~~LvS~S~DG~I~iWdl~sG~c--~~~~~l~~~~~~~t~I~~l~~~~~~~~l~c~g~~~~ 160 (1288)
+|++.+|+|++.||+|++||+.++.+ ......+ . ..|..+.-++....+...+.+..
T Consensus 68 ----------------spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~---~--~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 68 ----------------SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVF---S--GPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp ----------------CTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECS---S--SCEEEEEECTTSCEEEEEECCSS
T ss_pred ----------------CCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCC---C--CCEEEEEECCCCCEEEEEECCCC
T ss_conf ----------------99996899994899789948989841566762255---7--84489998999997999989977
Q ss_pred -----CCCC--------CCCCCCCCCCCCCCCCCC-CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCC
Q ss_conf -----6666--------665432235422234667-88899974199995678449999952543348731899982167
Q 000781 161 -----QLSD--------HHSFESVEGDLVSEDKEV-PMKNPPKCTLVIVDTYGLTIVQTVFHGNLSIGPWKFMDVVSLGE 226 (1288)
Q Consensus 161 -----~~~~--------~~~~~~~~g~~~~~d~~~-~~~~~~~~~I~i~D~~tl~vi~~~~s~~l~~~pis~l~v~~~~~ 226 (1288)
.+.+ ......+....++.+... ...+..+++|.+||..+.+...++.. |..+|.+++|.+.
T Consensus 127 ~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~---H~~~V~~v~fspd-- 201 (611)
T 1nr0_A 127 RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE---HTKFVHSVRYNPD-- 201 (611)
T ss_dssp CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC---CSSCEEEEEECTT--
T ss_pred CEEEEEEEECCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECC---CCCCEEEEEECCC--
T ss_conf 36699996389976325478898369998899982999992898099997999757665200---2571699999799--
Q ss_pred CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCE--EEE
Q ss_conf 787314899965983899950368755444577633357655404750673247139999407988999966943--784
Q 000781 227 DMGKHYGLMVDSVGRLQLVPISKESHLDREEGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDHC--IFR 304 (1288)
Q Consensus 227 ~~~~~~~lls~s~dg~ikvW~l~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~v~~Is~s~dg~~i~lv~~~~~--i~~ 304 (1288)
+..+++++.|+.+++|++.+..... .+... .. ...+|.+.+..++++++++.++.++.++. +|+
T Consensus 202 ----g~~las~s~D~~i~lwd~~~g~~~~----~~~~~--~~----~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 202 ----GSLFASTGGDGTIVLYNGVDGTKTG----VFEDD--SL----KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp ----SSEEEEEETTSCEEEEETTTCCEEE----ECBCT--TS----SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ----CCEEEEEECCCCEEEEECCCCCEEE----EECCC--CC----CCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf ----9989999899919998899982866----51366--43----2356678789999979999999990898099996
Q ss_pred ECCCCCCCCEEEEEECCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCC
Q ss_conf 04788521214432042232078887523888991113200001345523555305999958997999997278764556
Q 000781 305 LLGSGSTIGEICFVDNLFCLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIVYAISYMNEKFDY 384 (1288)
Q Consensus 305 ~l~~~~~~g~~s~~~~ll~~~~~~~~~~~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~dG~~~iy~l~~~~~~~~~ 384 (1288)
+ .+++.+..+. ..........+..| .+. .++..+.+|.+++|+...+.
T Consensus 268 ~-~~~~~~~~~~--------~~~~~~~~~~~~~~--~~~----------------~l~s~s~d~~i~~~~~~~~~----- 315 (611)
T 1nr0_A 268 V-ATLKVEKTIP--------VGTRIEDQQLGIIW--TKQ----------------ALVSISANGFINFVNPELGS----- 315 (611)
T ss_dssp T-TTTEEEEEEE--------CCSSGGGCEEEEEE--CSS----------------CEEEEETTCCEEEEETTTTE-----
T ss_pred C-CCCCEEEEEC--------CCCCCCCEEEEEEE--CCC----------------EEEEEECCCCEEEEECCCCC-----
T ss_conf 8-8870134404--------78876640689997--388----------------79999589968999688997-----
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCC
Q ss_conf 88522376458899702598841242489953100023345544671899954567899996304996137620110376
Q 000781 385 EPHFEIPAVSYPSGVKFSIHFIQMSLYLLRMETVCFHVEETSQWRPYISVWSLSQKHSGPGKQCRMVGEGFSFVDWVNNS 464 (1288)
Q Consensus 385 ~~l~~i~~~~~~~~~~~~v~f~~~~~~L~~v~s~~~~~~~~l~~~p~i~iwsl~~~~~~~~~~~k~l~sG~~~g~W~~~~ 464 (1288)
.......+......+.|.+.+.+++... .+.. +++|++.... ..+.+..+.......+.
T Consensus 316 ----~~~~~~gh~~~v~~l~~spdg~~l~s~s-----~D~~------v~~Wd~~~~~-----~~~~~~~~h~~~v~~~~- 374 (611)
T 1nr0_A 316 ----IDQVRYGHNKAITALSSSADGKTLFSAD-----AEGH------INSWDISTGI-----SNRVFPDVHATMITGIK- 374 (611)
T ss_dssp ----EEEEECCCSSCEEEEEECTTSSEEEEEE-----TTSC------EEEEETTTCC-----EEECSSCSCSSCEEEEE-
T ss_pred ----CCEEECCCCCCEEEEEEECCCCEEEEEE-----CCCC------EEEEECCCCC-----EEEECCCCCCCEEEEEE-
T ss_conf ----4469837888889999918999899995-----8984------9999788792-----56321667765078999-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECC
Q ss_conf 54577878645766334345840154556889889960102249983899885305763588799998079299999236
Q 000781 465 TFLDENEGSCTGKSDLTFCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDL 544 (1288)
Q Consensus 465 ~~~~~~~g~~~~~l~~s~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs~dG~I~i~~~d~ 544 (1288)
.... ..+.....+..+++|+............. ........++.+.++... ++.+ .++.+.+|.
T Consensus 375 ---~s~~----~~l~s~s~d~~v~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~----~~~~-~~~~v~~~~--- 438 (611)
T 1nr0_A 375 ---TTSK----GDLFTVSWDDHLKVVPAGGSGVDSSKAVA-NKLSSQPLGLAVSADGDI----AVAA-CYKHIAIYS--- 438 (611)
T ss_dssp ---ECTT----SCEEEEETTTEEEEECSSSSSSCTTSCCE-EECSSCEEEEEECTTSSC----EEEE-ESSEEEEEE---
T ss_pred ---ECCC----CCEEEEECCCCEEEEECCCCCCCCCCEEE-EECCCCCCEEEEECCCCE----EEEE-ECCEEEEEE---
T ss_conf ---8789----96999984896689546885435652120-014899707998079969----9999-676399984---
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCE--EEEEECCCC
Q ss_conf 666899988544587506899923886779999821245888876674999997999399993899716--999800586
Q 000781 545 FERHNSPGASLKVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNL--ITVMHHHVA 622 (1288)
Q Consensus 545 ~~~~~~~~~~~d~~t~~~~~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~tg~~--l~~l~~H~~ 622 (1288)
.++ ...+. |...+++++| +||| +++++|+.|++|++||+..+.. ... .+|.+
T Consensus 439 --------------~~~-~~~~~-~~~~v~~va~-----spdg----~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~ 492 (611)
T 1nr0_A 439 --------------HGK-LTEVP-ISYNSSCVAL-----SNDK----QFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPA 492 (611)
T ss_dssp --------------TTE-EEEEE-CSSCEEEEEE-----CTTS----CEEEEEETTSEEEEEEEETTEEEEEEE-EECSS
T ss_pred --------------CCC-EEEEE-CCCCCEEEEE-----ECCC----CEEEEECCCCEEEEEECCCCCEEEEEC-CCCCC
T ss_conf --------------894-34640-6889549999-----2899----899996899739999945992224101-57788
Q ss_pred CEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCC-CEEEEE--ECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 789999799999999999999997999099997898-606899--41799994899995999999997348874359998
Q 000781 623 PVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLET-LRVERM--FPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVD 699 (1288)
Q Consensus 623 ~V~sv~~sP~~~~~~~~~~ivSgs~D~sV~IWdl~t-~~~i~~--l~gH~~~V~~I~~sp~~~~Litg~~D~s~ssD~Dg 699 (1288)
.|++++|+|+ ++++++++.|++|++|++.+ +++... +.+|...|++++|+|++++|++|+.| +
T Consensus 493 ~v~~v~fspd------g~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D--------~ 558 (611)
T 1nr0_A 493 EITSVAFSNN------GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD--------N 558 (611)
T ss_dssp CEEEEEECTT------SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETT--------S
T ss_pred CEEEEEECCC------CCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEECC--------C
T ss_conf 6079999899------9989999489989998857787223210264046642589989989979999799--------7
Q ss_pred EEEEEECCCCC-EE-EEEECC-CCCEEEEEEECCCCCEEEECCEEECCCCCCCCCEEECCCCCEEEEECC
Q ss_conf 59999899991-89-999289-975577433227632000063450750025783100059967999587
Q 000781 700 VLFIWDVKTGA-RE-RVLRGT-ASHSMFDHFCKGISMNSISGSVLNGNTSVSSLLLPIHEDGTFRQSQIQ 766 (1288)
Q Consensus 700 tI~IWDl~tg~-l~-~~l~gH-~~~vi~~~~~~~~~~~~~sgs~~~g~~~~s~~l~~~~~D~tir~w~~~ 766 (1288)
+|++||++++. .. ..+.+| ...+..+.|.++.. ++ ....|+++|+|+++
T Consensus 559 ~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~--l~----------------s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 559 SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT--IV----------------SAGQDSNIKFWNVP 610 (611)
T ss_dssp CEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE--EE----------------EEETTSCEEEEECC
T ss_pred CEEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCCE--EE----------------EECCCCCEEEEECC
T ss_conf 299997887555632644467656711899858997--99----------------95288778998444
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=347.21 Aligned_cols=176 Identities=19% Similarity=0.244 Sum_probs=88.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 34345840154556889889960102249983899885305763588799998079299999236666899988544587
Q 000781 480 LTFCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDLFERHNSPGASLKVNS 559 (1288)
Q Consensus 480 ~s~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs~dG~I~i~~~d~~~~~~~~~~~~d~~t 559 (1288)
....++.+++|+.. ++....+.+|...|+++.+.++..+ +++++.|+.+++|+. +
T Consensus 402 ~~~~d~~v~~~~~~-----~~~~~~~~~~~~~v~~~~~s~d~~~----l~~~~~d~~v~~w~~----------------~ 456 (577)
T 2ymu_A 402 SASDDKTVKLWNRN-----GQLLQTLTGHSSSVWGVAFSPDDQT----IASASDDKTVKLWNR----------------N 456 (577)
T ss_dssp EEETTSEEEEECTT-----CCEEEEEECCSSCEEEEEECTTSSE----EEEEETTSEEEEEET----------------T
T ss_pred EEECCCEEEEEECC-----CCEEEEECCCCCCEEEEEECCCCCE----EEEECCCCEEEEEEC----------------C
T ss_conf 99499989999699-----9789896288997579999899999----999939998999979----------------9
Q ss_pred CEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCC
Q ss_conf 50689992388677999982124588887667499999799939999389971699980058678999979999999999
Q 000781 560 HVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWS 639 (1288)
Q Consensus 560 ~~~~~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~tg~~l~~l~~H~~~V~sv~~sP~~~~~~~~ 639 (1288)
++....+.+|...|++++| +||| ++|++++.|++|++||. +++++..+.+|.+.|++++|+|+ +
T Consensus 457 ~~~~~~~~~~~~~v~~~~~-----spd~----~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~d------g 520 (577)
T 2ymu_A 457 GQLLQTLTGHSSSVRGVAF-----SPDG----QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD------G 520 (577)
T ss_dssp SCEEEEEECCSSCEEEEEE-----CTTS----CEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT------S
T ss_pred CCEEEEECCCCCCEEEEEE-----CCCC----CEEEEEECCCEEEEECC-CCCEEEEEECCCCCEEEEEECCC------C
T ss_conf 9889997278997789999-----6999----99999919897999939-99789998679999899999189------9
Q ss_pred CEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 999999799909999789860689941799994899995999999997348874359998599998
Q 000781 640 DCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWD 705 (1288)
Q Consensus 640 ~~ivSgs~D~sV~IWdl~t~~~i~~l~gH~~~V~~I~~sp~~~~Litg~~D~s~ssD~DgtI~IWD 705 (1288)
+++++++.|+.|++||. +++++..+.+|...|++++|+|++++|++++.| ++|++||
T Consensus 521 ~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D--------~~i~~Wd 577 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD--------KTVKLWN 577 (577)
T ss_dssp SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SCEEEEC
T ss_pred CEEEEEECCCEEEEEEC-CCCEEEEECCCCCCEEEEEECCCCCEEEEEECC--------CEEEEEC
T ss_conf 99999989699999969-997898971888887899996899999999089--------9999969
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=341.52 Aligned_cols=532 Identities=14% Similarity=0.117 Sum_probs=355.2
Q ss_pred CCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99820799998179996999958887999985678998300159840346456895741454202574322111125676
Q 000781 14 PPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIADLSICYPAMVSRDGKAEHWKAENSSN 93 (1288)
Q Consensus 14 ~p~h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~Vt~L~~~s~~~~~~~~~~~~~~~~~~~~ 93 (1288)
.+...|++++|+||+++|++|+.||.|++||+.+ .++...+.+|..+|+++.|..
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~-------------------- 709 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT-----GKLVHTYDEHSEQVNCCHFTN-------------------- 709 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----CCEEEEEECCSSCEEEEEECS--------------------
T ss_pred CCCCCEEEEEEECCCCEEEEEECCCEEEEEECCC-----CCEEEEECCCCCCEEEEEEEC--------------------
T ss_conf 6777789999926999899981899599987799-----936899958997379999840--------------------
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 34555699987999828990999988998069974089986889603541789982599995325776666665432235
Q 000781 94 VMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTNQLSDHHSFESVEG 173 (1288)
Q Consensus 94 ~~~~~s~d~~~LvS~S~DG~I~iWdl~sG~c~~~~~l~~~~~~~t~I~~l~~~~~~~~l~c~g~~~~~~~~~~~~~~~~g 173 (1288)
..+..++++++.||.|++||+.++++......+ ..+ +..+..++....+.+++
T Consensus 710 -----~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h---~~~--v~~~~~sp~~~~l~s~s----------------- 762 (1249)
T 3sfz_A 710 -----KSNHLLLATGSNDFFLKLWDLNQKECRNTMFGH---TNS--VNHCRFSPDDELLASCS----------------- 762 (1249)
T ss_dssp -----SSSCCEEEEEETTSCEEEEETTSSSEEEEECCC---SSC--EEEEEECSSTTEEEEEE-----------------
T ss_pred -----CCCCEEEEEEECCCEEEEEECCCCCHHHEECCC---CCC--EEEEEEECCCCEEEEEE-----------------
T ss_conf -----899659999808970999989996342201277---797--88999925999899997-----------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCC----------CCCCEEEEEEECCCCCCCCEEEEEECCCCEE
Q ss_conf 422234667888999741999956784499999525433----------4873189998216778731489996598389
Q 000781 174 DLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHGNLS----------IGPWKFMDVVSLGEDMGKHYGLMVDSVGRLQ 243 (1288)
Q Consensus 174 ~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi~~~~s~~l~----------~~pis~l~v~~~~~~~~~~~~lls~s~dg~i 243 (1288)
.++.|.+||..+......+...... ...+.++++.. + +..+++++ ++.+
T Consensus 763 --------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---d---g~~l~~~~-~~~v 821 (1249)
T 3sfz_A 763 --------------ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA---D---GDKIIVAA-KNKV 821 (1249)
T ss_dssp --------------SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT---T---SSEEEEEE-TTEE
T ss_pred --------------CCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECC---C---CCEEEEEC-CCCE
T ss_conf --------------8985999968888655302023210246776445650179999978---9---98899975-8959
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCE--EEEECCCCCCCCEEEEEECC
Q ss_conf 9950368755444577633357655404750673247139999407988999966943--78404788521214432042
Q 000781 244 LVPISKESHLDREEGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDHC--IFRLLGSGSTIGEICFVDNL 321 (1288)
Q Consensus 244 kvW~l~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~v~~Is~s~dg~~i~lv~~~~~--i~~~l~~~~~~g~~s~~~~l 321 (1288)
.+|++.... ........+...+..+.+++++..++.+..++. +|+. .++.....+
T Consensus 822 ~~~d~~~~~----------------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~-~~~~~~~~~------ 878 (1249)
T 3sfz_A 822 LLFDIHTSG----------------LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNI-DSRLKVADC------ 878 (1249)
T ss_dssp EEEETTTCC----------------EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEET-TTTEEEEEE------
T ss_pred EEEEECCCC----------------CEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCCEEEEC------
T ss_conf 999956897----------------235774787776079998278888999947986999986-789565322------
Q ss_pred EEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 23207888752388899111320000134552355530599995899799999727876455688522376458899702
Q 000781 322 FCLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIVYAISYMNEKFDYEPHFEIPAVSYPSGVKF 401 (1288)
Q Consensus 322 l~~~~~~~~~~~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~dG~~~iy~l~~~~~~~~~~~l~~i~~~~~~~~~~~ 401 (1288)
..+ ...+....|..++. .+++.+.+|.+++|++.......... .....
T Consensus 879 ---~~h--~~~v~~v~~spdg~----------------~l~s~s~dg~v~vw~~~~~~~~~~~~-----------~~~~~ 926 (1249)
T 3sfz_A 879 ---RGH--LSWVHGVMFSPDGS----------------SFLTASDDQTIRVWETKKVCKNSAIV-----------LKQEI 926 (1249)
T ss_dssp ---CCC--SSCEEEEEECTTSS----------------EEEEEETTSCEEEEEHHHHHSCCSSS-----------EEEEE
T ss_pred ---CCC--CCCEEEEEECCCCC----------------EEEEEECCCEEEEEECCCCCEEEEEC-----------CCCEE
T ss_conf ---787--66568999989999----------------89999589728988746652010211-----------33103
Q ss_pred EEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 59884124248995310002334554467189995456789999630499613762011037654577878645766334
Q 000781 402 SIHFIQMSLYLLRMETVCFHVEETSQWRPYISVWSLSQKHSGPGKQCRMVGEGFSFVDWVNNSTFLDENEGSCTGKSDLT 481 (1288)
Q Consensus 402 ~v~f~~~~~~L~~v~s~~~~~~~~l~~~p~i~iwsl~~~~~~~~~~~k~l~sG~~~g~W~~~~~~~~~~~g~~~~~l~~s 481 (1288)
.+.+......+.... .... +.++..... .......+. .. ....++++. .+...
T Consensus 927 ~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~------~~~~~~~~~--i~-----~~~~sp~g~---~l~~g 979 (1249)
T 3sfz_A 927 DVVFQENETMVLAVD-----NIRG------LQLIAGKTG------QIDYLPEAQ--VS-----CCCLSPHLE---YVAFG 979 (1249)
T ss_dssp EEEEETTEEEEEEEE-----SSSS------EEEEEESSC------CEEEECCSC--EE-----EEEECTTSS---EEEEE
T ss_pred EEEECCCCCEEEEEC-----CCCC------EEEEECCCC------EEEECCCCC--EE-----EEEECCCCC---EEEEE
T ss_conf 689759986899813-----7762------489844765------089725672--78-----999958997---79998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCE
Q ss_conf 34584015455688988996010224998389988530576358879999807929999923666689998854458750
Q 000781 482 FCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDLFERHNSPGASLKVNSHV 561 (1288)
Q Consensus 482 ~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs~dG~I~i~~~d~~~~~~~~~~~~d~~t~~ 561 (1288)
..++.+.+|+.... .....+.+|...|+++.+.++..+ +++++.||.|++|++. +++
T Consensus 980 ~~~g~i~i~d~~~~----~~~~~~~~h~~~v~~l~~s~dg~~----l~s~~~dg~i~vwd~~---------------~~~ 1036 (1249)
T 3sfz_A 980 DEDGAIKIIELPNN----RVFSSGVGHKKAVRHIQFTADGKT----LISSSEDSVIQVWNWQ---------------TGD 1036 (1249)
T ss_dssp ETTSCCEEEETTTT----SCEEECCCCSSCCCCEEECSSSSC----EEEECSSSBEEEEETT---------------TTE
T ss_pred CCCCCEEEEECCCC----CEEEECCCCCCCEEEEEECCCCCE----EEEECCCCEEEEEECC---------------CCC
T ss_conf 69998899975787----234430367771689999899998----9998699879999879---------------996
Q ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCE
Q ss_conf 68999238867799998212458888766749999979993999938997169998005867899997999999999999
Q 000781 562 SRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDC 641 (1288)
Q Consensus 562 ~~~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~tg~~l~~l~~H~~~V~sv~~sP~~~~~~~~~~ 641 (1288)
.. .+.+|...|.++.|+ ++ ..+++++.|++|++||+.+++....+.+|.+.|++++|+|+ +..
T Consensus 1037 ~~-~~~~~~~~v~~~~~~-----~~-----~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d------~~~ 1099 (1249)
T 3sfz_A 1037 YV-FLQAHQETVKDFRLL-----QD-----SRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSD------ATK 1099 (1249)
T ss_dssp EE-CCBCCSSCEEEEEEC-----SS-----SEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSS------SSS
T ss_pred EE-EEECCCCCEEEEEEC-----CC-----CCEEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCC------CCE
T ss_conf 68-985278738999990-----89-----95899978896899888988655887466884899999899------998
Q ss_pred EEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEE------
Q ss_conf 99997999099997898606899417999948999959999999973488743599985999989999189999------
Q 000781 642 FLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVL------ 715 (1288)
Q Consensus 642 ivSgs~D~sV~IWdl~t~~~i~~l~gH~~~V~~I~~sp~~~~Litg~~D~s~ssD~DgtI~IWDl~tg~l~~~l------ 715 (1288)
+++++.|++|++||+.+++++..+.+|...|++++|+|++.+|++++.| |+|++||+.+++..+.+
T Consensus 1100 l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~d--------g~i~vwd~~~~~~~~~~~~~~~~ 1171 (1249)
T 3sfz_A 1100 FSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDN--------GEIRIWNVSDGQLLHSCAPISVE 1171 (1249)
T ss_dssp CEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETT--------SCCCEEESSSSCCCCCCCCCC--
T ss_pred EEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECC--------CEEEEEECCCCCEEEEECCCCCC
T ss_conf 9998499948998789850012550687767999997999989998289--------97999988999457885144444
Q ss_pred ---ECCCCCEEEEEEECCCCCEEEECCEEECCCCCCCCCEEECCCCCEEEEECCC
Q ss_conf ---2899755774332276320000634507500257831000599679995875
Q 000781 716 ---RGTASHSMFDHFCKGISMNSISGSVLNGNTSVSSLLLPIHEDGTFRQSQIQN 767 (1288)
Q Consensus 716 ---~gH~~~vi~~~~~~~~~~~~~sgs~~~g~~~~s~~l~~~~~D~tir~w~~~~ 767 (1288)
.+|...+..+.|++.. . .+-+ .+++++.|++..
T Consensus 1172 ~~~~~~~~~v~~l~fs~dg-------~-----------~l~s-~~g~v~vwd~~~ 1207 (1249)
T 3sfz_A 1172 EGTATHGGWVTDVCFSPDS-------K-----------TLVS-AGGYLKWWNVAT 1207 (1249)
T ss_dssp -----CCSCCCEEEECTTS-------S-----------CEEE-ESSSEEEBCSSS
T ss_pred CCCCCCCCEEEEEEECCCC-------C-----------EEEE-CCCEEEEEECCC
T ss_conf 2102567428999997899-------9-----------8997-798599989888
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=335.97 Aligned_cols=556 Identities=11% Similarity=0.022 Sum_probs=369.2
Q ss_pred EEEEECCCC--CCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCC-EEEEEECCCCCCCCCCC
Q ss_conf 579808999--982079999817999699995888799998567899830015984034645-68957414542025743
Q 000781 6 VACIWSGTP--PSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAP-IADLSICYPAMVSRDGK 82 (1288)
Q Consensus 6 ~~~lw~~~~--p~h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~-Vt~L~~~s~~~~~~~~~ 82 (1288)
..-.|.+.| +...|++++++||+++|++++ |+.|++|++.+. .....+...+.+|..+ |++++|
T Consensus 6 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~-~~~~~~~~~~~~h~~~~v~~~~~----------- 72 (615)
T 1pgu_A 6 LKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDG-DSKVPPVVQFTGHGSSVVTTVKF----------- 72 (615)
T ss_dssp EEEEECCCCCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSS-CCSSCSEEEECTTTTSCEEEEEE-----------
T ss_pred HHHCCCCCCCCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCC-CCCCCCCEEEECCCCCEEEEEEE-----------
T ss_conf 52315999877658536899889999799935-984999977788-77651431880578844999997-----------
Q ss_pred CCCCCCCCCCCCCCCCCC--CCCEEEEEECCCEEEEEECCCC--------EEEEEEECCCCCCCCCEEEEECCCCCCEEE
Q ss_conf 221111256763455569--9987999828990999988998--------069974089986889603541789982599
Q 000781 83 AEHWKAENSSNVMGKSSL--DNGALISACTDGVLCVWSRSSG--------HCRRRRKLPPWVGSPSVICTLPSNPRYVCI 152 (1288)
Q Consensus 83 ~~~~~~~~~~~~~~~~s~--d~~~LvS~S~DG~I~iWdl~sG--------~c~~~~~l~~~~~~~t~I~~l~~~~~~~~l 152 (1288)
++ ++.+|++++.||.|++||+.++ ++......+ ...+..+.-++....+
T Consensus 73 ----------------sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l 131 (615)
T 1pgu_A 73 ----------------SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL-----AGPISDISWDFEGRRL 131 (615)
T ss_dssp ----------------CSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC-----SSCEEEEEECTTSSEE
T ss_pred ----------------CCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCC-----CCCEEEEEEECCCCEE
T ss_conf ----------------9678998899964898799976888765544554200011125-----6637999990799989
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCE
Q ss_conf 99532577666666543223542223466788899974199995678449999952543348731899982167787314
Q 000781 153 GCCFIDTNQLSDHHSFESVEGDLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHGNLSIGPWKFMDVVSLGEDMGKHY 232 (1288)
Q Consensus 153 ~c~g~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi~~~~s~~l~~~pis~l~v~~~~~~~~~~~ 232 (1288)
...+.+. ...+.|.+|| +.+.+..+.. +..++.+++|... + ..
T Consensus 132 ~~~~~~~---------------------------~~~~~v~~~d--~~~~~~~~~~---~~~~v~~~~~~~~---~--~~ 174 (615)
T 1pgu_A 132 CVVGEGR---------------------------DNFGVFISWD--SGNSLGEVSG---HSQRINACHLKQS---R--PM 174 (615)
T ss_dssp EEEECCS---------------------------SCSEEEEETT--TCCEEEECCS---CSSCEEEEEECSS---S--SC
T ss_pred EEECCCC---------------------------CCCCEEEEEE--CCCCCEEEEC---CCCCEEEEEECCC---C--CC
T ss_conf 9931687---------------------------7755799997--8981031306---7743889998878---9--96
Q ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC---CCEEEEEECC-CCEEEEEECCCE--EEEEC
Q ss_conf 89996598389995036875544457763335765540475067324---7139999407-988999966943--78404
Q 000781 233 GLMVDSVGRLQLVPISKESHLDREEGNGLCKSSSQLDMAILQNGVVE---GGHLVSVATC-GNIIALVLKDHC--IFRLL 306 (1288)
Q Consensus 233 ~lls~s~dg~ikvW~l~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~---~v~~Is~s~d-g~~i~lv~~~~~--i~~~l 306 (1288)
.+++++.|+.+++|++.... .+..+..+.. .+..+.++++ ++.++.+..++. +|++
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~- 236 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFK-----------------FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG- 236 (615)
T ss_dssp EEEEEETTTEEEEEETTTBE-----------------EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET-
T ss_pred EEEEEECCCCEEEEECCCCC-----------------EEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEC-
T ss_conf 89999579959999699961-----------------013202567777428999978977888999868980899989-
Q ss_pred CCCCCCCEEEEEECCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC
Q ss_conf 78852121443204223207888752388899111320000134552355530599995899799999727876455688
Q 000781 307 GSGSTIGEICFVDNLFCLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIVYAISYMNEKFDYEP 386 (1288)
Q Consensus 307 ~~~~~~g~~s~~~~ll~~~~~~~~~~~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~dG~~~iy~l~~~~~~~~~~~ 386 (1288)
.+++.+..+ ..........+....|. .+. .+++.+.+|.+++|++..+........
T Consensus 237 ~~~~~~~~~-------~~~~~~~~~~v~~~~~~-~~~----------------~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 237 KSGEFLKYI-------EDDQEPVQGGIFALSWL-DSQ----------------KFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp TTCCEEEEC-------CBTTBCCCSCEEEEEES-SSS----------------EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEE-------CCCCCCCCCCEEEEEEC-CCC----------------EEEEECCCCCEEEEECCCCCEEEEECC
T ss_conf 999785895-------25444567755899981-899----------------799984899489997888927878847
Q ss_pred CCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCC
Q ss_conf 52237645889970259884124248995310002334554467189995456789999630499613762011037654
Q 000781 387 HFEIPAVSYPSGVKFSIHFIQMSLYLLRMETVCFHVEETSQWRPYISVWSLSQKHSGPGKQCRMVGEGFSFVDWVNNSTF 466 (1288)
Q Consensus 387 l~~i~~~~~~~~~~~~v~f~~~~~~L~~v~s~~~~~~~~l~~~p~i~iwsl~~~~~~~~~~~k~l~sG~~~g~W~~~~~~ 466 (1288)
.. .........+.|. .+.+++... .+.. +.+|++... .......+.......+.
T Consensus 293 ~~-----~~~~~~~~~~~~~-~~~~l~~~~-----~~g~------i~~~d~~~~------~~~~~~~~~~~~v~~~~--- 346 (615)
T 1pgu_A 293 DK-----QQLGNQQVGVVAT-GNGRIISLS-----LDGT------LNFYELGHD------EVLKTISGHNKGITALT--- 346 (615)
T ss_dssp CT-----TCGGGCEEEEEEE-ETTEEEEEE-----TTSC------EEEEETTEE------EEEEEECCCSSCEEEEE---
T ss_pred CC-----CCCCCCEEEEEEC-CCCEEEEEE-----CCCC------EEEEECCCC------CEEEEEECCCCCEEEEE---
T ss_conf 87-----7545714699918-997699997-----8997------899988899------28899947778789999---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 57787864576633434584015455688988996010224998389988530576358879999807929999923666
Q 000781 467 LDENEGSCTGKSDLTFCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDLFE 546 (1288)
Q Consensus 467 ~~~~~g~~~~~l~~s~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs~dG~I~i~~~d~~~ 546 (1288)
. + .+.....++.+++|+.. ... .+|...|.++.+ +.... +++++.||.+++|+.....
T Consensus 347 -~-~------~l~~~~~dg~i~~w~~~--------~~~-~~~~~~v~~~~~-~~~~~----l~~~~~d~~i~~~~~~~~~ 404 (615)
T 1pgu_A 347 -V-N------PLISGSYDGRIMEWSSS--------SMH-QDHSNLIVSLDN-SKAQE----YSSISWDDTLKVNGITKHE 404 (615)
T ss_dssp -T-T------TTEEEETTSCEEETTTT--------EEE-CCCCSCEEEEEC-CSTTC----CEEEETTTEEEETTEEEEE
T ss_pred -E-C------CCEEECCCCEEEEEECH--------HHC-CCCCCCEEEEEE-CCCCE----EEEEECCCCEEEEECCCCC
T ss_conf -5-6------74898799959998752--------415-755685179997-89867----9999589979998866676
Q ss_pred C-------------------CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEC-CCCEEEE
Q ss_conf 6-------------------8999885445875068999238867799998212458888766749999979-9939999
Q 000781 547 R-------------------HNSPGASLKVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSM-DCSIRIW 606 (1288)
Q Consensus 547 ~-------------------~~~~~~~~d~~t~~~~~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~-D~tI~iW 606 (1288)
. .......|+..+++....+. |...+++++|+ + +++++|+. |+.|++|
T Consensus 405 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~----~~l~~~~~~d~~i~~~ 472 (615)
T 1pgu_A 405 FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR-LNSPGSAVSLS-------Q----NYVAVGLEEGNTIQVF 472 (615)
T ss_dssp CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEEC-------S----SEEEEEETTTSCEEEE
T ss_pred CCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEEECC-CCCCCEEEEEC-------C----CEEEEEECCCCEEEEE
T ss_conf 3678469998289878999679826999446786655515-67872077883-------8----8899965689869999
Q ss_pred ECCCCCEE-EEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECC-CCCCCEEEEECC-----
Q ss_conf 38997169-99800586789999799999999999999997999099997898606899417-999948999959-----
Q 000781 607 DLGSGNLI-TVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPG-HPNYPAKVVWDC----- 679 (1288)
Q Consensus 607 Dl~tg~~l-~~l~~H~~~V~sv~~sP~~~~~~~~~~ivSgs~D~sV~IWdl~t~~~i~~l~g-H~~~V~~I~~sp----- 679 (1288)
|+..++.. ..+..|...|++++|+|+ +.++++++.|+.|++||+++++++..+.+ |...|++++|+|
T Consensus 473 ~~~~~~~~~~~~~~~~~~v~~~~~s~~------g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~ 546 (615)
T 1pgu_A 473 KLSDLEVSFDLKTPLRAKPSYISISPS------ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGA 546 (615)
T ss_dssp ETTEEEEEEECSSCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC---
T ss_pred ECCCCCCCCCCCCCCCCCEEEEEECCC------CCEEEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCC
T ss_conf 888854353336776575079999899------99899817998599865777762467604788714699976832345
Q ss_pred -----CCCEEEEEECCCCCCCCCCCEEEEEECCCC-CEEEEEECCCCCEEEEEEECCCCCEEEECCEEECCCCCCCCCEE
Q ss_conf -----999999973488743599985999989999-18999928997557743322763200006345075002578310
Q 000781 680 -----PRGYIACLCRDHSRTSDAVDVLFIWDVKTG-ARERVLRGTASHSMFDHFCKGISMNSISGSVLNGNTSVSSLLLP 753 (1288)
Q Consensus 680 -----~~~~Litg~~D~s~ssD~DgtI~IWDl~tg-~l~~~l~gH~~~vi~~~~~~~~~~~~~sgs~~~g~~~~s~~l~~ 753 (1288)
++.+|++++.| ++|++||++++ +++..+.+|...+..+.|++... . +.
T Consensus 547 ~~~~~~~~~l~~~~~d--------g~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~--l----------------~s 600 (615)
T 1pgu_A 547 NEEEIEEDLVATGSLD--------TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST--L----------------VS 600 (615)
T ss_dssp ---CCSCCEEEEEETT--------SCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE--E----------------EE
T ss_pred CCCCCCCCEEEEECCC--------CCEEEEECCCCCEECHHHHCCCCCEEEEEECCCCC--E----------------EE
T ss_conf 3324688889998179--------71999977888540311335943058999738997--2----------------88
Q ss_pred ECCCCCEEEEECC
Q ss_conf 0059967999587
Q 000781 754 IHEDGTFRQSQIQ 766 (1288)
Q Consensus 754 ~~~D~tir~w~~~ 766 (1288)
...|+++++|+++
T Consensus 601 ~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 601 SGADACIKRWNVV 613 (615)
T ss_dssp EETTSCEEEEEEC
T ss_pred ECCCCEEEEEEEE
T ss_conf 4599639999601
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=326.90 Aligned_cols=532 Identities=12% Similarity=0.069 Sum_probs=342.0
Q ss_pred EEEEECCC---------CCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCC--
Q ss_conf 57980899---------9982079999817999699995888799998567899830015984034645689574145--
Q 000781 6 VACIWSGT---------PPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIADLSICYP-- 74 (1288)
Q Consensus 6 ~~~lw~~~---------~p~h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~Vt~L~~~s~-- 74 (1288)
.+.||... .+.+.|++++|+|||++|+||+.||+|+|||+.+ ........+.+|..+|.+++|...
T Consensus 40 ~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~---~~~~~~~~~~~~~~~v~~v~fs~dg~ 116 (611)
T 1nr0_A 40 SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ---TTHILKTTIPVFSGPVKDISWDSESK 116 (611)
T ss_dssp EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS---TTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred EEEEECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC---CCCEEEEEECCCCCCEEEEEECCCCC
T ss_conf 799945787242737658998659999999996899994899789948989---84156676225578448999899999
Q ss_pred -CCCCCC-----CCCCCCCC--------CCCCCCCCCC-CCCCC-EEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCC
Q ss_conf -420257-----43221111--------2567634555-69998-79998289909999889980699740899868896
Q 000781 75 -AMVSRD-----GKAEHWKA--------ENSSNVMGKS-SLDNG-ALISACTDGVLCVWSRSSGHCRRRRKLPPWVGSPS 138 (1288)
Q Consensus 75 -~~~~~~-----~~~~~~~~--------~~~~~~~~~~-s~d~~-~LvS~S~DG~I~iWdl~sG~c~~~~~l~~~~~~~t 138 (1288)
+...+. +....|+. ++...+..+. +|++. +|+|++.|+++++||..++++......| . .
T Consensus 117 ~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H---~--~ 191 (611)
T 1nr0_A 117 RIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH---T--K 191 (611)
T ss_dssp EEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC---S--S
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCC---C--C
T ss_conf 7999989977366999963899763254788983699988999829999928980999979997576652002---5--7
Q ss_pred EEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCC----CCCC
Q ss_conf 035417899825999953257766666654322354222346678889997419999567844999995254----3348
Q 000781 139 VICTLPSNPRYVCIGCCFIDTNQLSDHHSFESVEGDLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHGN----LSIG 214 (1288)
Q Consensus 139 ~I~~l~~~~~~~~l~c~g~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi~~~~s~~----l~~~ 214 (1288)
.|..+.-++....+...+ .+++|++||..+.+.+..+.... -|.+
T Consensus 192 ~V~~v~fspdg~~las~s-------------------------------~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~ 240 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTG-------------------------------GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG 240 (611)
T ss_dssp CEEEEEECTTSSEEEEEE-------------------------------TTSCEEEEETTTCCEEEECBCTTSSSCSSSS
T ss_pred CEEEEEECCCCCEEEEEE-------------------------------CCCCEEEEECCCCCEEEEECCCCCCCCCCCC
T ss_conf 169999979999899998-------------------------------9991999889998286651366432356678
Q ss_pred CCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEE
Q ss_conf 73189998216778731489996598389995036875544457763335765540475067324713999940798899
Q 000781 215 PWKFMDVVSLGEDMGKHYGLMVDSVGRLQLVPISKESHLDREEGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIA 294 (1288)
Q Consensus 215 pis~l~v~~~~~~~~~~~~lls~s~dg~ikvW~l~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~v~~Is~s~dg~~i~ 294 (1288)
+|.+++|.+ + +..+++++.|+.+++|++.+..... .+.....+.. ..+.+..+++.++
T Consensus 241 ~V~~v~~sp---d---g~~l~s~s~D~~v~lWd~~~~~~~~--------------~~~~~~~~~~--~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 241 SVFGLTWSP---D---GTKIASASADKTIKIWNVATLKVEK--------------TIPVGTRIED--QQLGIIWTKQALV 298 (611)
T ss_dssp CEEEEEECT---T---SSEEEEEETTSEEEEEETTTTEEEE--------------EEECCSSGGG--CEEEEEECSSCEE
T ss_pred CEEEEEECC---C---CCEEEEEECCCEEEEEECCCCCEEE--------------EECCCCCCCC--EEEEEEECCCEEE
T ss_conf 789999979---9---9999999089809999688870134--------------4047887664--0689997388799
Q ss_pred EEECCCE--EEEECCCCCCCCEEEEEECCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEE
Q ss_conf 9966943--78404788521214432042232078887523888991113200001345523555305999958997999
Q 000781 295 LVLKDHC--IFRLLGSGSTIGEICFVDNLFCLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIV 372 (1288)
Q Consensus 295 lv~~~~~--i~~~l~~~~~~g~~s~~~~ll~~~~~~~~~~~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~dG~~~i 372 (1288)
.+..++. +|+. ..+. . ......+ ...+....|.+++. .++..+.||.+++
T Consensus 299 s~s~d~~i~~~~~-~~~~----~-----~~~~~gh--~~~v~~l~~spdg~----------------~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 299 SISANGFINFVNP-ELGS----I-----DQVRYGH--NKAITALSSSADGK----------------TLFSADAEGHINS 350 (611)
T ss_dssp EEETTCCEEEEET-TTTE----E-----EEEECCC--SSCEEEEEECTTSS----------------EEEEEETTSCEEE
T ss_pred EEECCCCEEEEEC-CCCC----C-----CEEECCC--CCCEEEEEEECCCC----------------EEEEEECCCCEEE
T ss_conf 9958996899968-8997----4-----4698378--88889999918999----------------8999958984999
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE
Q ss_conf 99727876455688522376458899702598841242489953100023345544671899954567899996304996
Q 000781 373 YAISYMNEKFDYEPHFEIPAVSYPSGVKFSIHFIQMSLYLLRMETVCFHVEETSQWRPYISVWSLSQKHSGPGKQCRMVG 452 (1288)
Q Consensus 373 y~l~~~~~~~~~~~l~~i~~~~~~~~~~~~v~f~~~~~~L~~v~s~~~~~~~~l~~~p~i~iwsl~~~~~~~~~~~k~l~ 452 (1288)
|++..+.... ............+.|... ..++... .+.. +++|.................
T Consensus 351 Wd~~~~~~~~--------~~~~~h~~~v~~~~~s~~-~~l~s~s-----~d~~------v~~w~~~~~~~~~~~~~~~~~ 410 (611)
T 1nr0_A 351 WDISTGISNR--------VFPDVHATMITGIKTTSK-GDLFTVS-----WDDH------LKVVPAGGSGVDSSKAVANKL 410 (611)
T ss_dssp EETTTCCEEE--------CSSCSCSSCEEEEEECTT-SCEEEEE-----TTTE------EEEECSSSSSSCTTSCCEEEC
T ss_pred EECCCCCEEE--------ECCCCCCCEEEEEEECCC-CCEEEEE-----CCCC------EEEEECCCCCCCCCCEEEEEC
T ss_conf 9788792563--------216677650789998789-9699998-----4896------689546885435652120014
Q ss_pred ECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEE
Q ss_conf 13762011037654577878645766334345840154556889889960102249983899885305763588799998
Q 000781 453 EGFSFVDWVNNSTFLDENEGSCTGKSDLTFCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGF 532 (1288)
Q Consensus 453 sG~~~g~W~~~~~~~~~~~g~~~~~l~~s~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs 532 (1288)
.+.... .....++ ..........+.+|+.. . ...+ .|...+.++.+.++..+ +++|+
T Consensus 411 ~~~~~~-------~~~s~dg----~~~~~~~~~~v~~~~~~------~-~~~~-~~~~~v~~va~spdg~~----lasgs 467 (611)
T 1nr0_A 411 SSQPLG-------LAVSADG----DIAVAACYKHIAIYSHG------K-LTEV-PISYNSSCVALSNDKQF----VAVGG 467 (611)
T ss_dssp SSCEEE-------EEECTTS----SCEEEEESSEEEEEETT------E-EEEE-ECSSCEEEEEECTTSCE----EEEEE
T ss_pred CCCCCE-------EEEECCC----CEEEEEECCEEEEEECC------C-EEEE-ECCCCCEEEEEECCCCE----EEEEC
T ss_conf 899707-------9980799----69999967639998489------4-3464-06889549999289989----99968
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCC-C
Q ss_conf 079299999236666899988544587506899923886779999821245888876674999997999399993899-7
Q 000781 533 FSGEIEVIQFDLFERHNSPGASLKVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGS-G 611 (1288)
Q Consensus 533 ~dG~I~i~~~d~~~~~~~~~~~~d~~t~~~~~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~t-g 611 (1288)
.|+.|++|+... ........ .+|...|++++| +||| ++|++++.|++|++||+.+ +
T Consensus 468 ~D~~v~lwd~~~-------------~~~~~~~~-~~h~~~v~~v~f-----spdg----~~las~s~d~~v~~w~~~~~~ 524 (611)
T 1nr0_A 468 QDSKVHVYKLSG-------------ASVSEVKT-IVHPAEITSVAF-----SNNG----AFLVATDQSRKVIPYSVANNF 524 (611)
T ss_dssp TTSEEEEEEEET-------------TEEEEEEE-EECSSCEEEEEE-----CTTS----SEEEEEETTSCEEEEEGGGTT
T ss_pred CCCEEEEEECCC-------------CCEEEEEC-CCCCCCEEEEEE-----CCCC----CEEEEECCCCCEEEEECCCCC
T ss_conf 997399999459-------------92224101-577886079999-----8999----989999489989998857787
Q ss_pred CEEEE--EECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCE-EE-EEECCC-CCCCEEEEECCCCCEEEE
Q ss_conf 16999--80058678999979999999999999999799909999789860-68-994179-999489999599999999
Q 000781 612 NLITV--MHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLR-VE-RMFPGH-PNYPAKVVWDCPRGYIAC 686 (1288)
Q Consensus 612 ~~l~~--l~~H~~~V~sv~~sP~~~~~~~~~~ivSgs~D~sV~IWdl~t~~-~i-~~l~gH-~~~V~~I~~sp~~~~Lit 686 (1288)
++... +..|.+.|++++|+|+ +++|++++.|++|++|+++++. +. ..+.+| ...|++++|+|++. |++
T Consensus 525 ~~~~~~~~~~H~~~V~~v~fspd------g~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s 597 (611)
T 1nr0_A 525 ELAHTNSWTFHTAKVACVSWSPD------NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVS 597 (611)
T ss_dssp EESCCCCCCCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEE
T ss_pred CEEEEEEEEECCCCEEEEEECCC------CCEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCCE-EEE
T ss_conf 22321026404664258998998------99799997997299997887555632644467656711899858997-999
Q ss_pred EECCCCCCCCCCCEEEEEECC
Q ss_conf 734887435999859999899
Q 000781 687 LCRDHSRTSDAVDVLFIWDVK 707 (1288)
Q Consensus 687 g~~D~s~ssD~DgtI~IWDl~ 707 (1288)
++. |++|++|++.
T Consensus 598 ~~~--------D~~i~lW~~~ 610 (611)
T 1nr0_A 598 AGQ--------DSNIKFWNVP 610 (611)
T ss_dssp EET--------TSCEEEEECC
T ss_pred ECC--------CCCEEEEECC
T ss_conf 528--------8778998444
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=318.59 Aligned_cols=592 Identities=9% Similarity=-0.032 Sum_probs=321.1
Q ss_pred CCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99820799998179996999958887999985678998300159840346456895741454202574322111125676
Q 000781 14 PPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIADLSICYPAMVSRDGKAEHWKAENSSN 93 (1288)
Q Consensus 14 ~p~h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~Vt~L~~~s~~~~~~~~~~~~~~~~~~~~ 93 (1288)
.+...|+|++|+||+++||+|+.||.|++|+... .... ...+|..+|++++|
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~-----~~~~-~~~~~~~~V~~l~f---------------------- 66 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ-----VEVV-IKLEDRSAIKEMRF---------------------- 66 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT-----CEEE-EECSSCCCEEEEEE----------------------
T ss_pred CCCCCCEEEEECCCCCEEEEEECCCEEEEEECCC-----CEEE-EECCCCCCEEEEEE----------------------
T ss_conf 8899848999979999899992979899996899-----4799-98689997799999----------------------
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 34555699987999828990999988998069974089986889603541789982599995325776666665432235
Q 000781 94 VMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTNQLSDHHSFESVEG 173 (1288)
Q Consensus 94 ~~~~~s~d~~~LvS~S~DG~I~iWdl~sG~c~~~~~l~~~~~~~t~I~~l~~~~~~~~l~c~g~~~~~~~~~~~~~~~~g 173 (1288)
++ +.+|++++.|++|++||+.+++++.....+ + .+..+..++....++..+
T Consensus 67 -----sp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~---~---~V~~v~~sp~g~~l~sgs----------------- 117 (902)
T 2oaj_A 67 -----VK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVP---G---KITSIDTDASLDWMLIGL----------------- 117 (902)
T ss_dssp -----ET-TTEEEEEETTCEEEEEETTTCSEEEEEECS---S---CEEEEECCTTCSEEEEEE-----------------
T ss_pred -----CC-CCEEEEEECCCEEEEEECCCCCEEEEECCC---C---CEEEEEECCCCCEEEEEC-----------------
T ss_conf -----08-988999989595999989999689997489---9---879999879999899994-----------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEE-EEE-------ECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEE
Q ss_conf 422234667888999741999956784499-999-------525433487318999821677873148999659838999
Q 000781 174 DLVSEDKEVPMKNPPKCTLVIVDTYGLTIV-QTV-------FHGNLSIGPWKFMDVVSLGEDMGKHYGLMVDSVGRLQLV 245 (1288)
Q Consensus 174 ~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi-~~~-------~s~~l~~~pis~l~v~~~~~~~~~~~~lls~s~dg~ikv 245 (1288)
.+++|.+||..+.... +.+ ..-.-+.++|.+++|.+. + ...+++++.|+.+ +
T Consensus 118 --------------~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~--~---~~~l~~g~~dg~v-l 177 (902)
T 2oaj_A 118 --------------QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR--D---IGTVLISYEYVTL-T 177 (902)
T ss_dssp --------------TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT--E---EEEEEEECSSCEE-E
T ss_pred --------------CCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCC--C---CCEEEEEECCCCE-E
T ss_conf --------------999299999999962650304321000254457897389997669--9---9989999189849-9
Q ss_pred EECCCCCCCCC-CCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCE--EEEECCCCCCCCEEEEEECCE
Q ss_conf 50368755444-577633357655404750673247139999407988999966943--784047885212144320422
Q 000781 246 PISKESHLDRE-EGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDHC--IFRLLGSGSTIGEICFVDNLF 322 (1288)
Q Consensus 246 W~l~~~~~~~~-~~~~l~~~~~~~~~i~~~~~~~~~v~~Is~s~dg~~i~lv~~~~~--i~~~l~~~~~~g~~s~~~~ll 322 (1288)
|++........ ..+..-...+..........|.+.+..++++++++.++.+..++. +|+. .+++.+... .+.
T Consensus 178 Wd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~-~~g~~~~~r----~l~ 252 (902)
T 2oaj_A 178 YSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA-NSGHMIMAR----TVF 252 (902)
T ss_dssp EETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET-TTCCEEEEE----CSS
T ss_pred EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCCEEEEE----EEC
T ss_conf 987789657998335577677765443323456777689998599999999989993999987-899688888----501
Q ss_pred EECCC-----------CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECC-----CCEEEEEECCCCCCCCCCC
Q ss_conf 32078-----------8875238889911132000013455235553059999589-----9799999727876455688
Q 000781 323 CLEGG-----------STNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNR-----GSAIVYAISYMNEKFDYEP 386 (1288)
Q Consensus 323 ~~~~~-----------~~~~~~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~d-----G~~~iy~l~~~~~~~~~~~ 386 (1288)
....+ .....+....|....+. .-...++.++.+ ..+.+|++.... .+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~p-----------d~~~ll~sg~~~~~~~~~~v~~~~~~~~~-~~~~~s 320 (902)
T 2oaj_A 253 ETEINVPQPDYIRDSSTNAAKISKVYWMCENNP-----------EYTSLLISHKSISRGDNQSLTMIDLGYTP-RYSITS 320 (902)
T ss_dssp CSCTTSCCTTCCCCCSSCCCEEEEEEEEECSST-----------TEEEEEEEEECSTTSSCCCEEEEEEEECC-CGGGCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-----------CCCEEEEECCCCCCCCCCEEEEEECCCCC-CCCCCC
T ss_conf 234578777678888555677457999734999-----------88789996887777888528999547898-755542
Q ss_pred CC-----------CCCCCCCCCCCEEEEEEEEC----------CCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 52-----------23764588997025988412----------4248995310002334554467189995456789999
Q 000781 387 HF-----------EIPAVSYPSGVKFSIHFIQM----------SLYLLRMETVCFHVEETSQWRPYISVWSLSQKHSGPG 445 (1288)
Q Consensus 387 l~-----------~i~~~~~~~~~~~~v~f~~~----------~~~L~~v~s~~~~~~~~l~~~p~i~iwsl~~~~~~~~ 445 (1288)
.. .......+......+.+... ...++... .++. +.+|++...
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s-----~dg~------l~~~~~~~g----- 384 (902)
T 2oaj_A 321 YEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLIL-----GNGE------IETMLYPSG----- 384 (902)
T ss_dssp HHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEE-----TTSC------EEEEETTTC-----
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEC-----CCCC------EEEEECCCC-----
T ss_conf 556546641745227874189995479999778898867787850699991-----7984------899978999-----
Q ss_pred CCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCC
Q ss_conf 63049961376201103765457787864576633434584015455688988996010224998389988530576358
Q 000781 446 KQCRMVGEGFSFVDWVNNSTFLDENEGSCTGKSDLTFCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAP 525 (1288)
Q Consensus 446 ~~~k~l~sG~~~g~W~~~~~~~~~~~g~~~~~l~~s~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p 525 (1288)
+...... ..+ ..+..+...+..+ ........+|+...... +.....+.+|...+.++.+.++..+
T Consensus 385 ---~~~~~~~-----~~~--~~l~~~~~~v~~~--~~s~~~~~~w~~~~~~~-~~~~~~l~G~~~~v~sv~~spdg~~-- 449 (902)
T 2oaj_A 385 ---IFTDKAS-----LFP--QNLSWLRPLATTS--MAASVPNKLWLGALSAA-QNKDYLLKGGVRTKRQKLPAEYGTA-- 449 (902)
T ss_dssp ---CEECCGG-----GSC--GGGTTBTTBEEEE--EEEEEEHHHHHHHHHTT-BCCCCSCCCSBCCCCCCCCCSEEEE--
T ss_pred ---CCCCCCC-----CCC--CCCCCCCCCEEEE--EEEECCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCE--
T ss_conf ---8556555-----689--8522358972489--99974999998888604-6999754578577875333666758--
Q ss_pred CEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE-EEE-----CCCCCEEEEEEEECCCCCCCCCCCCEEEEEEC
Q ss_conf 879999807929999923666689998854458750689-992-----38867799998212458888766749999979
Q 000781 526 YAIVYGFFSGEIEVIQFDLFERHNSPGASLKVNSHVSRQ-YFL-----GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSM 599 (1288)
Q Consensus 526 ~~lv~Gs~dG~I~i~~~d~~~~~~~~~~~~d~~t~~~~~-~l~-----gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~ 599 (1288)
+++|+.||+|++|+.... . ........ .+. +|...|++++| +||| ++|++|+.
T Consensus 450 --laSgs~DgtVrlWd~~~g--~--------~~~~~~~~~~l~~~~~~~h~~~V~svaf-----spdg----~~LAsgs~ 508 (902)
T 2oaj_A 450 --FITGHSNGSVRIYDASHG--D--------IQDNASFEVNLSRTLNKAKELAVDKISF-----AAET----LELAVSIE 508 (902)
T ss_dssp --EEEEETTSEEEEEESSCC--T--------TTTTBCEEEEHHHHTTCSSSCCEEEEEE-----ETTT----TEEEEEET
T ss_pred --EEEECCCCCEEEEECCCC--C--------CCCCCEEEEECHHHCCCCCCCCEEEEEE-----CCCC----CEEEEEEC
T ss_conf --999658983899978776--4--------5677367750154137788876469996-----3899----96999945
Q ss_pred CCCEEEEECCCC---------------------------------------------CEEEEEECCCCCEEEEEECCCCC
Q ss_conf 993999938997---------------------------------------------16999800586789999799999
Q 000781 600 DCSIRIWDLGSG---------------------------------------------NLITVMHHHVAPVRQIILSPPQT 634 (1288)
Q Consensus 600 D~tI~iWDl~tg---------------------------------------------~~l~~l~~H~~~V~sv~~sP~~~ 634 (1288)
|++|++||+.++ +++..+.+|.++|++++|+|+
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpd-- 586 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNI-- 586 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBT--
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCC--
T ss_conf 857999992486555754557786651134551346796543224236898877760146999868886779996487--
Q ss_pred CCCCCCEEEEEECCCCEEEEECCCCEEEE--E---EC-CCCCCCEEEEEC-----CCC---CEEEEEECCCCCCCCCCCE
Q ss_conf 99999999999799909999789860689--9---41-799994899995-----999---9999973488743599985
Q 000781 635 EHPWSDCFLSVGEDFSVALASLETLRVER--M---FP-GHPNYPAKVVWD-----CPR---GYIACLCRDHSRTSDAVDV 700 (1288)
Q Consensus 635 ~~~~~~~ivSgs~D~sV~IWdl~t~~~i~--~---l~-gH~~~V~~I~~s-----p~~---~~Litg~~D~s~ssD~Dgt 700 (1288)
| ++++++.|++|++||+++...+. . +. +|...|++++|+ |++ .+|++|+.| ++
T Consensus 587 ----G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D--------~t 653 (902)
T 2oaj_A 587 ----G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM--------GE 653 (902)
T ss_dssp ----S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT--------SE
T ss_pred ----C-EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECC--------CC
T ss_conf ----6-8999958976999988898399970246726466661399999998417898763389999568--------73
Q ss_pred EEEEEC---CCCCEEEEEECCC-----CCEEEEE-EECCCCC-EEEECCEEEC---CCCCCCCCEEECCCCCEEEEECCC
Q ss_conf 999989---9991899992899-----7557743-3227632-0000634507---500257831000599679995875
Q 000781 701 LFIWDV---KTGARERVLRGTA-----SHSMFDH-FCKGISM-NSISGSVLNG---NTSVSSLLLPIHEDGTFRQSQIQN 767 (1288)
Q Consensus 701 I~IWDl---~tg~l~~~l~gH~-----~~vi~~~-~~~~~~~-~~~sgs~~~g---~~~~s~~l~~~~~D~tir~w~~~~ 767 (1288)
|++||+ .+|++...+.||. +.++... +..+... ...+.+.+.+ .....+.++.+ .+..+|+|++..
T Consensus 654 v~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~-~~~~ir~~~~~~ 732 (902)
T 2oaj_A 654 VITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLIT-GFDDIRLITLGK 732 (902)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEE-CSSEEEEECTTC
T ss_pred EEEEEEECCCCCCEEEEECCCEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEE-ECCCEEEEECCC
T ss_conf 9999995589986899966724407889647998586687973668878972557788777399999-354059996753
No 9
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=307.86 Aligned_cols=498 Identities=12% Similarity=0.083 Sum_probs=331.7
Q ss_pred CCCE-EEEEEEEC--CCCEEEEEECCCCEEEEECCCCCCC------CCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 9820-79999817--9996999958887999985678998------3001598403464568957414542025743221
Q 000781 15 PSHR-VTATSALT--QPPTLYTGGSDGSILWWSFSDSSYS------EIKPVAMLCGHSAPIADLSICYPAMVSRDGKAEH 85 (1288)
Q Consensus 15 p~h~-VTaia~Sp--dg~~LvTGs~DG~I~iWdl~~~~~~------~~~~~~~l~GH~a~Vt~L~~~s~~~~~~~~~~~~ 85 (1288)
+... |++++|+| |+++|++|+.||.|++||+.+ . .......+.+|..+|+++. +
T Consensus 62 h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~---~----------- 124 (615)
T 1pgu_A 62 HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF---DKESNSVEVNVKSEFQVLAGPISDIS---W----------- 124 (615)
T ss_dssp TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE---EGGGTEEEEEEEEEEECCSSCEEEEE---E-----------
T ss_pred CCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCC---CCCCCCCCCCCCCHHHCCCCCEEEEE---E-----------
T ss_conf 788449999979678998899964898799976888---76554455420001112566379999---9-----------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECC----CEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCE-EEEEEECCCC
Q ss_conf 11125676345556999879998289----909999889980699740899868896035417899825-9999532577
Q 000781 86 WKAENSSNVMGKSSLDNGALISACTD----GVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNPRYV-CIGCCFIDTN 160 (1288)
Q Consensus 86 ~~~~~~~~~~~~~s~d~~~LvS~S~D----G~I~iWdl~sG~c~~~~~l~~~~~~~t~I~~l~~~~~~~-~l~c~g~~~~ 160 (1288)
++++.+|++++.| +.|.+|| .+++......+ . ..|..+.-++... .+...+
T Consensus 125 -------------s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~---~--~~v~~~~~~~~~~~~l~~~~---- 180 (615)
T 1pgu_A 125 -------------DFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGH---S--QRINACHLKQSRPMRSMTVG---- 180 (615)
T ss_dssp -------------CTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSC---S--SCEEEEEECSSSSCEEEEEE----
T ss_pred -------------ECCCCEEEEECCCCCCCCEEEEEE--CCCCCEEEECC---C--CCEEEEEECCCCCCEEEEEE----
T ss_conf -------------079998999316877755799997--89810313067---7--43889998878996899995----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC---CCEEEEEEECCCCCCCCEEEEEE
Q ss_conf 666666543223542223466788899974199995678449999952543348---73189998216778731489996
Q 000781 161 QLSDHHSFESVEGDLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHGNLSIG---PWKFMDVVSLGEDMGKHYGLMVD 237 (1288)
Q Consensus 161 ~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi~~~~s~~l~~~---pis~l~v~~~~~~~~~~~~lls~ 237 (1288)
.++.|.+||..+.+.+..+.. +.. ++.+++|.+. .+ ..++++
T Consensus 181 ---------------------------~d~~v~vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~--~~---~~l~~~ 225 (615)
T 1pgu_A 181 ---------------------------DDGSVVFYQGPPFKFSASDRT---HHKQGSFVRDVEFSPD--SG---EFVITV 225 (615)
T ss_dssp ---------------------------TTTEEEEEETTTBEEEEEECS---SSCTTCCEEEEEECST--TC---CEEEEE
T ss_pred ---------------------------CCCCEEEEECCCCCEEEEECC---CCCCCCEEEEEEECCC--CC---CEEEEE
T ss_conf ---------------------------799599996999610132025---6777742899997897--78---889998
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE-C---CCCCCCEEEEEECCCCEEEEEECCCE--EEEECCCCCC
Q ss_conf 5983899950368755444577633357655404750-6---73247139999407988999966943--7840478852
Q 000781 238 SVGRLQLVPISKESHLDREEGNGLCKSSSQLDMAILQ-N---GVVEGGHLVSVATCGNIIALVLKDHC--IFRLLGSGST 311 (1288)
Q Consensus 238 s~dg~ikvW~l~~~~~~~~~~~~l~~~~~~~~~i~~~-~---~~~~~v~~Is~s~dg~~i~lv~~~~~--i~~~l~~~~~ 311 (1288)
+.++.+++|++.+.. .+... . .+.+.+..+.++ +++.++.+..++. +|++ .+++.
T Consensus 226 ~~dg~i~vwd~~~~~-----------------~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~-~~~~~ 286 (615)
T 1pgu_A 226 GSDRKISCFDGKSGE-----------------FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDV-TTSKC 286 (615)
T ss_dssp ETTCCEEEEETTTCC-----------------EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEET-TTTEE
T ss_pred ECCCEEEEEECCCCC-----------------EEEEECCCCCCCCCCEEEEEEC-CCCEEEEECCCCCEEEEEC-CCCCE
T ss_conf 689808999899997-----------------8589525444567755899981-8997999848994899978-88927
Q ss_pred CCEEEEEECCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 12144320422320788875238889911132000013455235553059999589979999972787645568852237
Q 000781 312 IGEICFVDNLFCLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIVYAISYMNEKFDYEPHFEIP 391 (1288)
Q Consensus 312 ~g~~s~~~~ll~~~~~~~~~~~~gg~fl~~~d~~~~~~~~~~~~~~~~~i~vws~dG~~~iy~l~~~~~~~~~~~l~~i~ 391 (1288)
+..+ ...............|. .+. .+++++.+|.+++|++..+.......
T Consensus 287 ~~~~-------~~~~~~~~~~~~~~~~~-~~~----------------~l~~~~~~g~i~~~d~~~~~~~~~~~------ 336 (615)
T 1pgu_A 287 VQKW-------TLDKQQLGNQQVGVVAT-GNG----------------RIISLSLDGTLNFYELGHDEVLKTIS------ 336 (615)
T ss_dssp EEEE-------ECCTTCGGGCEEEEEEE-ETT----------------EEEEEETTSCEEEEETTEEEEEEEEC------
T ss_pred EEEE-------CCCCCCCCCCEEEEEEC-CCC----------------EEEEEECCCCEEEEECCCCCEEEEEE------
T ss_conf 8788-------47877545714699918-997----------------69999789978999888992889994------
Q ss_pred CCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCC--CCCCCC------CCEEEEEECCCCCE---E
Q ss_conf 645889970259884124248995310002334554467189995456--789999------63049961376201---1
Q 000781 392 AVSYPSGVKFSIHFIQMSLYLLRMETVCFHVEETSQWRPYISVWSLSQ--KHSGPG------KQCRMVGEGFSFVD---W 460 (1288)
Q Consensus 392 ~~~~~~~~~~~v~f~~~~~~L~~v~s~~~~~~~~l~~~p~i~iwsl~~--~~~~~~------~~~k~l~sG~~~g~---W 460 (1288)
........+.| +. ++... .+.. +++|.+.. ..+... .....++.+..++. |
T Consensus 337 ---~~~~~v~~~~~-~~---l~~~~-----~dg~------i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~ 398 (615)
T 1pgu_A 337 ---GHNKGITALTV-NP---LISGS-----YDGR------IMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVN 398 (615)
T ss_dssp ---CCSSCEEEEET-TT---TEEEE-----TTSC------EEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEET
T ss_pred ---CCCCCEEEEEE-CC---CEEEC-----CCCE------EEEEECHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEE
T ss_conf ---77787899995-67---48987-----9995------9998752415755685179997898679999589979998
Q ss_pred ECCCCC--------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEE
Q ss_conf 037654--------577878645766334345840154556889889960102249983899885305763588799998
Q 000781 461 VNNSTF--------LDENEGSCTGKSDLTFCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGF 532 (1288)
Q Consensus 461 ~~~~~~--------~~~~~g~~~~~l~~s~~~s~~~lWd~~~~~~~~~~~~~f~~h~~~Vts~~~is~~~~~p~~lv~Gs 532 (1288)
+..... ....++ .+........+.+|+.... +....+ .+...++++.+. ..+ +++|+
T Consensus 399 ~~~~~~~~~~~~~~~~s~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~--~~~----l~~~~ 463 (615)
T 1pgu_A 399 GITKHEFGSQPKVASANNDG----FTAVLTNDDDLLILQSFTG----DIIKSV-RLNSPGSAVSLS--QNY----VAVGL 463 (615)
T ss_dssp TEEEEECSSCEEEEEECSSS----EEEEEETTSEEEEEETTTC----CEEEEE-ECSSCEEEEEEC--SSE----EEEEE
T ss_pred ECCCCCCCCCCEEEEECCCC----CEEEEECCCCEEEEECCCC----CEEEEC-CCCCCCEEEEEC--CCE----EEEEE
T ss_conf 86667636784699982898----7899967982699944678----665551-567872077883--888----99965
Q ss_pred C-CCCEEEEEECCCCCCCCCCCCCCCCCCEEE-EEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCC
Q ss_conf 0-792999992366668999885445875068-99923886779999821245888876674999997999399993899
Q 000781 533 F-SGEIEVIQFDLFERHNSPGASLKVNSHVSR-QYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGS 610 (1288)
Q Consensus 533 ~-dG~I~i~~~d~~~~~~~~~~~~d~~t~~~~-~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~t 610 (1288)
. ||.+++|+.. +++.. ..+.+|...|++++| +|+| ++|++|+.|+.|++||+.+
T Consensus 464 ~~d~~i~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~-----s~~g----~~l~~~~~dg~i~iw~~~~ 519 (615)
T 1pgu_A 464 EEGNTIQVFKLS---------------DLEVSFDLKTPLRAKPSYISI-----SPSE----TYIAAGDVMGKILLYDLQS 519 (615)
T ss_dssp TTTSCEEEEETT---------------EEEEEEECSSCCSSCEEEEEE-----CTTS----SEEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEEECC---------------CCCCCCCCCCCCCCCEEEEEE-----CCCC----CEEEECCCCCEEEEEECCC
T ss_conf 689869999888---------------854353336776575079999-----8999----9899817998599865777
Q ss_pred CCEEEEEEC-CCCCEEEEEECC----------CCCCCCCCCEEEEEECCCCEEEEECCCC-EEEEEECCCCCCCEEEEEC
Q ss_conf 716999800-586789999799----------9999999999999979990999978986-0689941799994899995
Q 000781 611 GNLITVMHH-HVAPVRQIILSP----------PQTEHPWSDCFLSVGEDFSVALASLETL-RVERMFPGHPNYPAKVVWD 678 (1288)
Q Consensus 611 g~~l~~l~~-H~~~V~sv~~sP----------~~~~~~~~~~ivSgs~D~sV~IWdl~t~-~~i~~l~gH~~~V~~I~~s 678 (1288)
++.+..+.+ |...|++++|+| + +.++++++.|+.|++||++++ +++..+.+|...|++++|+
T Consensus 520 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s 593 (615)
T 1pgu_A 520 REVKTSRWAFRTSKINAISWKPAEKGANEEEIE------EDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 593 (615)
T ss_dssp TEEEECCSCCCSSCEEEEEECCCC------CCS------CCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEE
T ss_pred CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCC------CCEEEEECCCCCEEEEECCCCCEECHHHHCCCCCEEEEEEC
T ss_conf 762467604788714699976832345332468------88899981797199997788854031133594305899973
Q ss_pred CCCCEEEEEECCCCCCCCCCCEEEEEECCCC
Q ss_conf 9999999973488743599985999989999
Q 000781 679 CPRGYIACLCRDHSRTSDAVDVLFIWDVKTG 709 (1288)
Q Consensus 679 p~~~~Litg~~D~s~ssD~DgtI~IWDl~tg 709 (1288)
|++. |++++. |++|++|+++++
T Consensus 594 ~~~~-l~s~~~--------d~~v~iw~~~~~ 615 (615)
T 1pgu_A 594 TPST-LVSSGA--------DACIKRWNVVLE 615 (615)
T ss_dssp ETTE-EEEEET--------TSCEEEEEEC--
T ss_pred CCCC-EEEECC--------CCEEEEEEEECC
T ss_conf 8997-288459--------963999960159
No 10
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=286.14 Aligned_cols=609 Identities=9% Similarity=-0.012 Sum_probs=341.8
Q ss_pred EEEEECCC--------CCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCC
Q ss_conf 57980899--------9982079999817999699995888799998567899830015984034645689574145420
Q 000781 6 VACIWSGT--------PPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIADLSICYPAMV 77 (1288)
Q Consensus 6 ~~~lw~~~--------~p~h~VTaia~Spdg~~LvTGs~DG~I~iWdl~~~~~~~~~~~~~l~GH~a~Vt~L~~~s~~~~ 77 (1288)
.+.+|... ++...|++++|+| +++|++++.|++|++||+.+ .+.+..+. |...|+++ .+
T Consensus 40 ~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~-----~~~~~~~~-~~~~V~~v---~~--- 106 (902)
T 2oaj_A 40 EVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS-----QKVLTTVF-VPGKITSI---DT--- 106 (902)
T ss_dssp EEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT-----CSEEEEEE-CSSCEEEE---EC---
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEEECC-CCEEEEEECCCEEEEEECCC-----CCEEEEEC-CCCCEEEE---EE---
T ss_conf 89999689947999868999779999908-98899998959599998999-----96899974-89987999---98---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEE---------CCCCCCCCCEEEEECCCCC
Q ss_conf 2574322111125676345556999879998289909999889980699740---------8998688960354178998
Q 000781 78 SRDGKAEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRSSGHCRRRRK---------LPPWVGSPSVICTLPSNPR 148 (1288)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~s~d~~~LvS~S~DG~I~iWdl~sG~c~~~~~---------l~~~~~~~t~I~~l~~~~~ 148 (1288)
++++.+|++++.||+|++||+.++++..... .. +....|..+.-++.
T Consensus 107 ---------------------sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~---~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 107 ---------------------DASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA---ARLSPIVSIQWNPR 162 (902)
T ss_dssp ---------------------CTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS---SCCCCCCEEEEETT
T ss_pred ---------------------CCCCCEEEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCC---CCCCCEEEEEECCC
T ss_conf ---------------------799998999949992999999999626503043210002544---57897389997669
Q ss_pred C-EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECC---------------CCC
Q ss_conf 2-599995325776666665432235422234667888999741999956784499999525---------------433
Q 000781 149 Y-VCIGCCFIDTNQLSDHHSFESVEGDLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHG---------------NLS 212 (1288)
Q Consensus 149 ~-~~l~c~g~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~I~i~D~~tl~vi~~~~s~---------------~l~ 212 (1288)
. ..+...+ .++.| +||..+.+.+..+..+ ..+
T Consensus 163 ~~~~l~~g~-------------------------------~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 163 DIGTVLISY-------------------------------EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEEEEEEC-------------------------------SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred CCCEEEEEE-------------------------------CCCCE-EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 999899991-------------------------------89849-9987789657998335577677765443323456
Q ss_pred CCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC--EEEEE-CCCCCCCEEEEEEC-
Q ss_conf 487318999821677873148999659838999503687554445776333576554--04750-67324713999940-
Q 000781 213 IGPWKFMDVVSLGEDMGKHYGLMVDSVGRLQLVPISKESHLDREEGNGLCKSSSQLD--MAILQ-NGVVEGGHLVSVAT- 288 (1288)
Q Consensus 213 ~~pis~l~v~~~~~~~~~~~~lls~s~dg~ikvW~l~~~~~~~~~~~~l~~~~~~~~--~i~~~-~~~~~~v~~Is~s~- 288 (1288)
..+|.+++|.+ + +..+++++.|+.+++|++.+...... ..+.+...+.. ..... ..+.+.+..+++++
T Consensus 211 ~~~V~~v~fsp---d---g~~lasgs~Dg~i~lWd~~~g~~~~~--r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~ 282 (902)
T 2oaj_A 211 TPKVIQSLYHP---N---SLHIITIHEDNSLVFWDANSGHMIMA--RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCE 282 (902)
T ss_dssp CCCEEEEEECT---T---SSEEEEEETTCCEEEEETTTCCEEEE--ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEEC
T ss_pred CCCEEEEEECC---C---CCEEEEEECCCEEEEEECCCCCEEEE--EEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 77768999859---9---99999998999399998789968888--8501234578777678888555677457999734
Q ss_pred ---CCCE-EEEEECCC-----E--EEEECCCC-------CCCCEE-E--EEECCEEECCCCCCCCEEEEEEEECCCCCCC
Q ss_conf ---7988-99996694-----3--78404788-------521214-4--3204223207888752388899111320000
Q 000781 289 ---CGNI-IALVLKDH-----C--IFRLLGSG-------STIGEI-C--FVDNLFCLEGGSTNSYVIGAMFLERVVAEKI 347 (1288)
Q Consensus 289 ---dg~~-i~lv~~~~-----~--i~~~l~~~-------~~~g~~-s--~~~~ll~~~~~~~~~~~~gg~fl~~~d~~~~ 347 (1288)
++.. ++.++.+. + +|+.-... ..+..+ . .....+.. .....+....+. ......
T Consensus 283 ~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-~~~sp~- 357 (902)
T 2oaj_A 283 NNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPL---PTNVPIVNILPI-PRQSPY- 357 (902)
T ss_dssp SSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECC---SSSSCEEEEEEC-CSSCSH-
T ss_pred CCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEC---CCCCCEEEEEEC-CCCCCC-
T ss_conf 999887899968877778885289995478987555425565466417452278741---899954799997-788988-
Q ss_pred CCCCCCCCCC-CEEEEEEECCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCC
Q ss_conf 1345523555-305999958997999997278764556-88522376458899702598841242489953100023345
Q 000781 348 ENTMGVCTTF-YENFAVWDNRGSAIVYAISYMNEKFDY-EPHFEIPAVSYPSGVKFSIHFIQMSLYLLRMETVCFHVEET 425 (1288)
Q Consensus 348 ~~~~~~~~~~-~~~i~vws~dG~~~iy~l~~~~~~~~~-~~l~~i~~~~~~~~~~~~v~f~~~~~~L~~v~s~~~~~~~~ 425 (1288)
+++.. ...+++.+.+|.+++|+++.+...... ..+. .....+..+..+.|....
T Consensus 358 -----~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~---~l~~~~~~v~~~~~s~~~---------------- 413 (902)
T 2oaj_A 358 -----FAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQ---NLSWLRPLATTSMAASVP---------------- 413 (902)
T ss_dssp -----HHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCG---GGTTBTTBEEEEEEEEEE----------------
T ss_pred -----CCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC---CCCCCCCCEEEEEEEECC----------------
T ss_conf -----67787850699991798489997899985565556898---522358972489999749----------------
Q ss_pred CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCE
Q ss_conf 544671899954567899996304996137620110376545778786457663343458401545568898899--601
Q 000781 426 SQWRPYISVWSLSQKHSGPGKQCRMVGEGFSFVDWVNNSTFLDENEGSCTGKSDLTFCQDTVPRSEHVDSRQAGD--GRD 503 (1288)
Q Consensus 426 l~~~p~i~iwsl~~~~~~~~~~~k~l~sG~~~g~W~~~~~~~~~~~g~~~~~l~~s~~~s~~~lWd~~~~~~~~~--~~~ 503 (1288)
..+|........ .....+.|.....+.+ ...+++. .+.+...++++++|+......... ...
T Consensus 414 ------~~~w~~~~~~~~---~~~~~l~G~~~~v~sv----~~spdg~---~laSgs~DgtVrlWd~~~g~~~~~~~~~~ 477 (902)
T 2oaj_A 414 ------NKLWLGALSAAQ---NKDYLLKGGVRTKRQK----LPAEYGT---AFITGHSNGSVRIYDASHGDIQDNASFEV 477 (902)
T ss_dssp ------HHHHHHHHHTTB---CCCCSCCCSBCCCCCC----CCCSEEE---EEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred ------HHHHHHHHHCCC---CCCCCCCCCCCCCCCC----CCCCCCC---EEEEECCCCCEEEEECCCCCCCCCCEEEE
T ss_conf ------999988886046---9997545785778753----3366675---89996589838999787764567736775
Q ss_pred ECC-----CCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCC---------CCCCCC-----C---------
Q ss_conf 022-----499838998853057635887999980792999992366668---------999885-----4---------
Q 000781 504 DFV-----HKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDLFERH---------NSPGAS-----L--------- 555 (1288)
Q Consensus 504 ~f~-----~h~~~Vts~~~is~~~~~p~~lv~Gs~dG~I~i~~~d~~~~~---------~~~~~~-----~--------- 555 (1288)
.+. +|...|+++.|.++..+ +++|+.||.|++|+++..... ...... .
T Consensus 478 ~l~~~~~~~h~~~V~svafspdg~~----LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (902)
T 2oaj_A 478 NLSRTLNKAKELAVDKISFAAETLE----LAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDV 553 (902)
T ss_dssp EHHHHTTCSSSCCEEEEEEETTTTE----EEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEEC
T ss_pred ECHHHCCCCCCCCEEEEEECCCCCE----EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 0154137788876469996389996----999945857999992486555754557786651134551346796543224
Q ss_pred ------CCC-CCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE-----EE-CCCC
Q ss_conf ------458-7506899923886779999821245888876674999997999399993899716999-----80-0586
Q 000781 556 ------KVN-SHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITV-----MH-HHVA 622 (1288)
Q Consensus 556 ------d~~-t~~~~~~l~gH~~~V~~L~~~p~~~SpdG~~~~~~LvSGs~D~tI~iWDl~tg~~l~~-----l~-~H~~ 622 (1288)
.++ ..++...+.+|.+.|++++| |||| +|++|+.|++|++||+.++..+.. +. +|.+
T Consensus 554 ~~~~~~~~~~g~~~~~~l~~h~~~V~svaf-----SpdG-----~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~ 623 (902)
T 2oaj_A 554 RDRAPTGVRQGFMPSTAVHANKGKTSAINN-----SNIG-----FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSA 623 (902)
T ss_dssp GGGCCTTCSEEEEEEEEECCCSCSEEEEEE-----CBTS-----EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCC
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEEEE-----CCCC-----EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCC
T ss_conf 236898877760146999868886779996-----4876-----899995897699998889839997024672646666
Q ss_pred CEEEEEEC-----CCCCCCCCCCEEEEEECCCCEEEEEC---CCCEEEEEECCCC-----CCCEEEE-EC----------
Q ss_conf 78999979-----99999999999999979990999978---9860689941799-----9948999-95----------
Q 000781 623 PVRQIILS-----PPQTEHPWSDCFLSVGEDFSVALASL---ETLRVERMFPGHP-----NYPAKVV-WD---------- 678 (1288)
Q Consensus 623 ~V~sv~~s-----P~~~~~~~~~~ivSgs~D~sV~IWdl---~t~~~i~~l~gH~-----~~V~~I~-~s---------- 678 (1288)
.|++++|+ ||+. .+.++++++.|++|++||+ .++++...+.+|. +.|..+. |+
T Consensus 624 ~V~sv~Fs~~~~~~Dg~---~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~ 700 (902)
T 2oaj_A 624 CVTCIEFVIMEYGDDGY---SSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLAT 700 (902)
T ss_dssp CEEEEEEEEEECTTSSS---EEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCB
T ss_pred CEEEEEEEEEECCCCCC---CCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCEECCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 13999999984178987---633899995687399999955899868999667244078896479985866879736688
Q ss_pred ------------CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCEEECCCC
Q ss_conf ------------99999999734887435999859999899991899992899755774332276320000634507500
Q 000781 679 ------------CPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGSVLNGNTS 746 (1288)
Q Consensus 679 ------------p~~~~Litg~~D~s~ssD~DgtI~IWDl~tg~l~~~l~gH~~~vi~~~~~~~~~~~~~sgs~~~g~~~ 746 (1288)
+++..|+ +++ ..+|+|++.++++.+...+|...+..+.+.. ..+.. +...
T Consensus 701 ~~~~~~l~~~~~~~~~~l~--------~~~--~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~-----~~~~~---~~~~ 762 (902)
T 2oaj_A 701 IPKMQNLSKGLCIPGIVLI--------TGF--DDIRLITLGKSKSTHKGFKYPLAATGLSYIS-----TVEKN---NDRK 762 (902)
T ss_dssp HHHHHGGGGTCCCCEEEEE--------ECS--SEEEEECTTCCCEEEEECSSCEEEEEEEEEE-----EECSS---SCEE
T ss_pred HHHHHCCCCCCCCCEEEEE--------EEC--CCEEEEECCCCCCEEEECCCCEEEEEEEEEE-----ECCCC---CCCC
T ss_conf 7897255778877739999--------935--4059996753351236725620144777887-----01355---5446
Q ss_pred CCCCCEEECCCCCEEEEECCCCCCC
Q ss_conf 2578310005996799958755334
Q 000781 747 VSSLLLPIHEDGTFRQSQIQNDERG 771 (1288)
Q Consensus 747 ~s~~l~~~~~D~tir~w~~~~~~~~ 771 (1288)
....++.++.|+++|.|++...+..
T Consensus 763 ~~~~l~~~~~~g~i~~~s~p~l~~~ 787 (902)
T 2oaj_A 763 NLTVIITLEINGHLRVFTIPDFKEQ 787 (902)
T ss_dssp EEEEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEEECCCCEEEEECCCHHHH
T ss_conf 7369999927995999978564778
Done!