Query 000785
Match_columns 1287
No_of_seqs 273 out of 1294
Neff 5.2
Searched_HMMs 29240
Date Tue Mar 26 18:10:42 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000785.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_553-557//hhsearch_pdb/000785hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 1.0 1 1 437.9 26.5 291 969-1286 2-336 (794)
2 1vbg_A Pyruvate,orthophosphate 1.0 1 1 361.7 14.0 244 970-1286 3-342 (876)
3 1kbl_A PPDK, pyruvate phosphat 1.0 1 1 355.4 9.6 242 971-1286 2-338 (873)
4 1h6z_A Pyruvate phosphate diki 1.0 1 1 348.0 10.4 267 969-1286 3-367 (913)
5 2x0s_A Pyruvate phosphate diki 1.0 1 1 334.1 9.8 268 969-1286 3-367 (913)
6 2ols_A Phosphoenolpyruvate syn 1.0 1 1 49.2 2.5 100 834-941 362-467 (794)
7 2e28_A Pyruvate kinase, PK; al 1.0 1 1 49.1 4.8 98 836-939 482-581 (587)
8 1vbg_A Pyruvate,orthophosphate 1.0 1 1 47.7 3.9 104 833-941 396-512 (876)
9 1kbl_A PPDK, pyruvate phosphat 1.0 1 1 47.5 3.3 105 832-941 391-508 (873)
10 3t05_A Pyruvate kinase, PK; te 1.0 1 1 47.2 8.9 97 836-939 501-599 (606)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=1.00 E-value=1 Score=437.94 Aligned_cols=291 Identities=24% Similarity=0.364 Sum_probs=238.6
Q ss_pred CCCEEEECCCCCC---CCCCHHHHHHHHHHHHCC-CCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
Q ss_conf 7760364799798---755644186998454189-965589950419789999998115304999999998430899947
Q 000785 969 RGKYAVSVEDFTP---DMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS 1044 (1287)
Q Consensus 969 ~~~~vi~l~e~~~---~~vGgKAanLa~L~~~lp-~gi~VP~GfvIPfgafe~fL~~~~n~~L~~~I~~l~~~l~~~d~~ 1044 (1287)
+++|+++|++.+. ..+|||++||++|.+.++ .|++||+||+||+++|++|++.+ ++++.+....+.++..+..
T Consensus 2 ~~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~ 78 (794)
T 2ols_A 2 ADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVA 78 (794)
T ss_dssp --CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHH
T ss_pred CCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHC---CHHHHHHHHHHHHCCCCHH
T ss_conf 9877987776880211138788998999998776479989998998799999999838---8489999998760556789
Q ss_pred HH----HHHHHHHHCCCCCHHHHHHHHHHHH----------------HCC-------CCCCCCC-------CHHHHHHHH
Q ss_conf 89----9999999928999999999999988----------------019-------9999972-------299999999
Q 000785 1045 KL----QEIQEAVLQMSAPLSLIYELKNKMR----------------SSG-------MPWPGDE-------GWNLAWRSI 1090 (1287)
Q Consensus 1045 ~L----~~IR~~I~~~~lP~el~~eL~~alR----------------SSg-------~s~aG~~-------g~e~i~~AI 1090 (1287)
.| .++|++|+++++|+++.++|..+++ ||+ .+|||++ |.++++.||
T Consensus 79 ~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Ai 158 (794)
T 2ols_A 79 ELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAM 158 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99999999999998489998999999999998742446567428981578733546654444566631689999999999
Q ss_pred HHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCC--EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 999933898589999998199997762077998300775--329999369998998652441344765510135567771
Q 000785 1091 KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM 1168 (1287)
Q Consensus 1091 K~VWASlys~RAi~yRr~~GI~~~~v~MAVLVQemV~ad--~SGVlfT~nP~tgd~~ei~Ieav~GLGEsLVsG~~Gtp~ 1168 (1287)
|+||||+||+||+.||+.+|++++++.|||+||+||.++ .|||+||+||.+|+++.++|+++|||||+||+|.+ +|+
T Consensus 159 k~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd 237 (794)
T 2ols_A 159 HHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPD 237 (794)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCE
T ss_pred HHHHHHCCCHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEECCCC-CCC
T ss_conf 9999861788899999975999177484699998116875258999967998898766999953689842211775-770
Q ss_pred EEEEECCCCC--CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 5999057898--98301356531245698714641499976310014897033352697321012358998778721015
Q 000785 1169 SFVTKKNNLK--SPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 1246 (1287)
Q Consensus 1169 ~f~v~K~~~~--~~~vl~~~sK~ig~~~k~~ii~rsdsnGedLe~yagaG~~~svp~~~~~~~~vdys~~plLtD~e~r~ 1246 (1287)
.|.++|.++. ...+. .+.++.. ...+++ ..+++ .+|.+..+++++.. ...++|+|++
T Consensus 238 ~~~v~kp~l~~~~~~i~---~~~~~~k-~~~~~~--~~~~~------~g~~~~~~~~p~~~------~~~~~L~d~~--- 296 (794)
T 2ols_A 238 EFYVFKPTLKAGKPAIL---RKTMGSK-HIKMIF--TDKAE------AGKSVTNVDVPEED------RNRFSITDEE--- 296 (794)
T ss_dssp EEEEEHHHHHTTSCCEE---EEECCCC-CEEEEE--CSCCS------SSTTEEEEECCHHH------HTSCSSCHHH---
T ss_pred EEEEECCCCCCCCCCEE---EEECCCC-CEEEEE--CCCCC------CCCEEEEEECCHHH------HCCCCCCHHH---
T ss_conf 89984343346776303---6522665-146873--35666------79704998689899------4587789999---
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEECC--EEEEEEECCC
Q ss_conf 999999999999998609973599999899--6999962157
Q 000785 1247 SVFSKIAETGKIIESLYGYPQDIEGVLKDG--LIYVVQARPQ 1286 (1287)
Q Consensus 1247 ~ll~~La~la~~IE~~fG~PQDIEwai~dg--~LyILQsRPq 1286 (1287)
+.+|++++..||++||.||||||+++++ +|||||+||+
T Consensus 297 --~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~ 336 (794)
T 2ols_A 297 --ITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE 336 (794)
T ss_dssp --HHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred --HHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCC
T ss_conf --9999999999998729976899999889885999984376
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=1.00 E-value=1 Score=361.70 Aligned_cols=244 Identities=17% Similarity=0.195 Sum_probs=190.1
Q ss_pred CCEEEEC----CCCC---CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC--CCHHHHHHHHHHHHHHC-
Q ss_conf 7603647----9979---875564418699845418996558995041978999999811--53049999999984308-
Q 000785 970 GKYAVSV----EDFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFIN- 1039 (1287)
Q Consensus 970 ~~~vi~l----~e~~---~~~vGgKAanLa~L~~~lp~gi~VP~GfvIPfgafe~fL~~~--~n~~L~~~I~~l~~~l~- 1039 (1287)
.+|+++| ++.+ ..++|||++||++|.+ .|++||+||+||+++|++|++.+ ...++++.|....+.++
T Consensus 3 ~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (876)
T 1vbg_A 3 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEE 79 (876)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH---CCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8689988766655672230018589999999997---8999999389779999999986100518899999999999987
Q ss_pred -----CCCHH-------------HHHHHHHHHHCCCCCHHHHHHHHHH---------HH---------------------
Q ss_conf -----99947-------------8999999999289999999999999---------88---------------------
Q 000785 1040 -----GGDLS-------------KLQEIQEAVLQMSAPLSLIYELKNK---------MR--------------------- 1071 (1287)
Q Consensus 1040 -----~~d~~-------------~L~~IR~~I~~~~lP~el~~eL~~a---------lR--------------------- 1071 (1287)
.++.. .+..++++|+++.+|++++++|..+ ||
T Consensus 80 ~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~ 159 (876)
T 1vbg_A 80 YMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEK 159 (876)
T ss_dssp HHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred HHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHH
T ss_conf 63513488766430000005654650689999817999999999997535215899999998631661350472657999
Q ss_pred -------------HCC---------CCCCCCC-----------CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCE
Q ss_conf -------------019---------9999972-----------2999999999999338985899999981999977620
Q 000785 1072 -------------SSG---------MPWPGDE-----------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCM 1118 (1287)
Q Consensus 1072 -------------SSg---------~s~aG~~-----------g~e~i~~AIK~VWASlys~RAi~yRr~~GI~~~~v~M 1118 (1287)
||+ .+|+|.| .+++++.||+.||||+||+||+.||+.+|++++ ..|
T Consensus 160 ~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~-~~~ 238 (876)
T 1vbg_A 160 LEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGL-RGT 238 (876)
T ss_dssp HHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCC-CCC
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH-HCC
T ss_conf 9998775184446668877899999999999988619999877599999999999955598789999996499800-075
Q ss_pred EEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 77998300775-----3299993699989986524413447655101355677715999057898983013565312456
Q 000785 1119 AVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY 1193 (1287)
Q Consensus 1119 AVLVQemV~ad-----~SGVlfT~nP~tgd~~ei~Ieav~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~ig~~ 1193 (1287)
||+||+||.++ .|||+||+||.||+++.+-..++.|+||.||+|.+ +|+.|.+ +
T Consensus 239 AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~----------l---------- 297 (876)
T 1vbg_A 239 AVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDA----------M---------- 297 (876)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHH----------H----------
T ss_pred EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCHHHHCCCC-CCCHHHH----------H----------
T ss_conf 589998025788997057999837899998663338998467356535885-8622555----------2----------
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 98714641499976310014897033352697321012358998778721015999999999999998609973599999
Q 000785 1194 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL 1273 (1287)
Q Consensus 1194 ~k~~ii~rsdsnGedLe~yagaG~~~svp~~~~~~~~vdys~~plLtD~e~r~~ll~~La~la~~IE~~fG~PQDIEwai 1273 (1287)
+ + ..++ .+.+|++++..||++||.||||||++
T Consensus 298 ----------------~----------------~-----------~~p~-----~~~~L~~~~~~lE~hy~~pqDIEfti 329 (876)
T 1vbg_A 298 ----------------K----------------N-----------LMPQ-----AYDELVENCNILESHYKEMQDIEFTV 329 (876)
T ss_dssp ----------------H----------------H-----------HCHH-----HHHHHHHHHHHHHHHHCSCEEEEEEE
T ss_pred ----------------C----------------C-----------CCHH-----HHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf ----------------0----------------2-----------6889-----99999999999999749975889999
Q ss_pred ECCEEEEEEECCC
Q ss_conf 8996999962157
Q 000785 1274 KDGLIYVVQARPQ 1286 (1287)
Q Consensus 1274 ~dg~LyILQsRPq 1286 (1287)
++|+|||||+||+
T Consensus 330 ~~g~L~iLQ~Rp~ 342 (876)
T 1vbg_A 330 QENRLWMLQCRTG 342 (876)
T ss_dssp ETTEEEEEEEEEC
T ss_pred ECCEEEEEEECCC
T ss_conf 8997999983023
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=1.00 E-value=1 Score=355.42 Aligned_cols=242 Identities=20% Similarity=0.316 Sum_probs=186.6
Q ss_pred CEEEECCCCCC---CCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC--CCHHHHHHHHHHHHHHCC-----
Q ss_conf 60364799798---75564418699845418996558995041978999999811--530499999999843089-----
Q 000785 971 KYAVSVEDFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFING----- 1040 (1287)
Q Consensus 971 ~~vi~l~e~~~---~~vGgKAanLa~L~~~lp~gi~VP~GfvIPfgafe~fL~~~--~n~~L~~~I~~l~~~l~~----- 1040 (1287)
+|++++++.+. .++|||++||++|.+ .|++||+||+||+++|++|++.+ ...+++++|....+.++.
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~~ 78 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CEEEECCCCCHHHHHHCCHHHHHHHHHHH---CCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 84897767881103337199999999996---879999979985999999998552364889999999999999873502
Q ss_pred -CCHH-------------HHHHHHHHHHCCCCCHHHHHHHHH----------HHH-------------------------
Q ss_conf -9947-------------899999999928999999999999----------988-------------------------
Q 000785 1041 -GDLS-------------KLQEIQEAVLQMSAPLSLIYELKN----------KMR------------------------- 1071 (1287)
Q Consensus 1041 -~d~~-------------~L~~IR~~I~~~~lP~el~~eL~~----------alR------------------------- 1071 (1287)
++.+ .+..+++.|+++.+|++++++|.. +||
T Consensus 79 fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~~ 158 (873)
T 1kbl_A 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAM 158 (873)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
T ss_conf 48878840487742050026427789980899989999999750772579999999984368732640606678899998
Q ss_pred ---------HC----------------------CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEE
Q ss_conf ---------01----------------------99999972299999999999933898589999998199997762077
Q 000785 1072 ---------SS----------------------GMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAV 1120 (1287)
Q Consensus 1072 ---------SS----------------------g~s~aG~~g~e~i~~AIK~VWASlys~RAi~yRr~~GI~~~~v~MAV 1120 (1287)
|+ |.+||. +..++++.|||.||||+||+||+.||+.+|++++ ..|||
T Consensus 159 ~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp~-dp~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~-~~~AV 236 (873)
T 1kbl_A 159 KEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQ-EPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGD-WGTAV 236 (873)
T ss_dssp HHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCC-CHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGG-GCCEE
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH-HCCEE
T ss_conf 875175756778878889999999999987505999875-6799999999999845488889999997699810-07468
Q ss_pred EEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 998300775-----329999369998998652441344765510135567771599905789898301356531245698
Q 000785 1121 LIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGK 1195 (1287)
Q Consensus 1121 LVQemV~ad-----~SGVlfT~nP~tgd~~ei~Ieav~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~ig~~~k 1195 (1287)
+||+||.++ .|||+||+||.||+++.+-...+.|+||.||+|.+ +|+.|.+ +
T Consensus 237 ~VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VV~G~~-tPd~~~~----------l------------ 293 (873)
T 1kbl_A 237 NVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVR-TPQPITQ----------L------------ 293 (873)
T ss_dssp EEEECCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSS-CCEEGGG----------H------------
T ss_pred EEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHCCCC-CCHHHHH----------H------------
T ss_conf 9998135789996257999845899998660169996277356652875-8515555----------1------------
Q ss_pred CCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
Q ss_conf 71464149997631001489703335269732101235899877872101599999999999999860997359999989
Q 000785 1196 PSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKD 1275 (1287)
Q Consensus 1196 ~~ii~rsdsnGedLe~yagaG~~~svp~~~~~~~~vdys~~plLtD~e~r~~ll~~La~la~~IE~~fG~PQDIEwai~d 1275 (1287)
+ + ..++ .+.+|++++..||++||.||||||++++
T Consensus 294 --------------~----------------~-----------~~p~-----~~~~L~~~~~~lE~hy~~pqDIEfti~~ 327 (873)
T 1kbl_A 294 --------------E----------------N-----------DMPD-----CYKQFMDLAMKLEKHFRDMQDMEFTIEE 327 (873)
T ss_dssp --------------H----------------H-----------HCHH-----HHHHHHHHHHHHHHHHTSCEEEEEEEET
T ss_pred --------------C----------------C-----------CCHH-----HHHHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf --------------1----------------2-----------6879-----9999999999999983997698999989
Q ss_pred CEEEEEEECCC
Q ss_conf 96999962157
Q 000785 1276 GLIYVVQARPQ 1286 (1287)
Q Consensus 1276 g~LyILQsRPq 1286 (1287)
|+|||||+||.
T Consensus 328 g~L~iLQtRp~ 338 (873)
T 1kbl_A 328 GKLYFLQTRNG 338 (873)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEECCC
T ss_conf 97999982331
No 4
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=1.00 E-value=1 Score=348.00 Aligned_cols=267 Identities=19% Similarity=0.225 Sum_probs=193.5
Q ss_pred CCCEEEECCC----CC---CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC-CCHHHHHHHHHHHHHH--
Q ss_conf 7760364799----79---875564418699845418996558995041978999999811-5304999999998430--
Q 000785 969 RGKYAVSVED----FT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISRLYKFI-- 1038 (1287)
Q Consensus 969 ~~~~vi~l~e----~~---~~~vGgKAanLa~L~~~lp~gi~VP~GfvIPfgafe~fL~~~-~n~~L~~~I~~l~~~l-- 1038 (1287)
+.+||+++++ .+ .+++|||++||++|.+ .|+|||+||+||+.+|..|++.+ ...++++++....+.+
T Consensus 3 ~~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---lglpVPpGF~Itteac~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (913)
T 1h6z_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEK 79 (913)
T ss_dssp CCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHH---CCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77879988887666884457643767655999997---789999918962999999997389958899999999999998
Q ss_pred --C--CCCH-------------HHHHHHHHHHHCCCCCHHHHHH-HHH----------HHHH----C-----CCC---C-
Q ss_conf --8--9994-------------7899999999928999999999-999----------9880----1-----999---9-
Q 000785 1039 --N--GGDL-------------SKLQEIQEAVLQMSAPLSLIYE-LKN----------KMRS----S-----GMP---W- 1077 (1287)
Q Consensus 1039 --~--~~d~-------------~~L~~IR~~I~~~~lP~el~~e-L~~----------alRS----S-----g~s---~- 1077 (1287)
. .++. ..+..+++.|+++.+++++++. |.. +||. . +.+ |
T Consensus 80 ~~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe 159 (913)
T 1h6z_A 80 EMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFE 159 (913)
T ss_dssp HHCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTS
T ss_pred HHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHH
T ss_conf 72855478777652355216655540278998715999799999998740771679999999998734464388778899
Q ss_pred -------------------------------------CC----CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
Q ss_conf -------------------------------------99----7229999999999993389858999999819999776
Q 000785 1078 -------------------------------------PG----DEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNL 1116 (1287)
Q Consensus 1078 -------------------------------------aG----~~g~e~i~~AIK~VWASlys~RAi~yRr~~GI~~~~v 1116 (1287)
.| ++-.++++.||+.||||+||+||+.||+.+|+++ ++
T Consensus 160 ~~~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~-~~ 238 (913)
T 1h6z_A 160 EALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITG-LL 238 (913)
T ss_dssp TTTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCS-CC
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH-HH
T ss_conf 99999999739876567999999999999999999970999985899999999999998437578999999769991-22
Q ss_pred CEEEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEEC-CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 2077998300775-----3299993699989986524413-447655101355677715999057898983013565312
Q 000785 1117 CMAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEI-VKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLI 1190 (1287)
Q Consensus 1117 ~MAVLVQemV~ad-----~SGVlfT~nP~tgd~~ei~Iea-v~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~i 1190 (1287)
.|||+||+||.++ .|||+||+||.||++. +++++ ..||||.||+|.+ +|+.|++++.. .+ ..+.+
T Consensus 239 ~mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~~-~~ge~li~alGE~VVsG~v-tPd~~~v~~~~----~~---~~~~i 309 (913)
T 1h6z_A 239 GTAVNVQAMVFGNINDRSATGVAFSRSPSTGENF-FFGEYLVNAQGEDVVAGIR-TPQQINHSLSL----RW---AKAHG 309 (913)
T ss_dssp CCCEEEEECCCSCSSTTCEEEEEESSCSSSCCSS-CEEEEEESCCTTHHHHCCS-CCEESSHHHHH----HH---HTTSS
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCC-EEEEEEEECCCCHHCCCCC-CCEEEEEECCC----CH---HHCCC
T ss_conf 6347999973268888613699983788888865-2468987347851304875-67079983463----10---01145
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 45698714641499976310014897033352697321012358998778721015999999999999998609973599
Q 000785 1191 GLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIE 1270 (1287)
Q Consensus 1191 g~~~k~~ii~rsdsnGedLe~yagaG~~~svp~~~~~~~~vdys~~plLtD~e~r~~ll~~La~la~~IE~~fG~PQDIE 1270 (1287)
.. +. . ....+ +..+.+.+++ +.+|++++..||++||+|||||
T Consensus 310 ~~---~~------------------~---~~~~~---------~~l~~l~p~~-----~~eLa~~a~~lE~hyg~pqDIE 351 (913)
T 1h6z_A 310 VG---EE------------------E---RRKRY---------PSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLE 351 (913)
T ss_dssp CC---HH------------------H---HHHHS---------CCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEE
T ss_pred CH---HH------------------H---CCCCC---------HHHHHCCHHH-----HHHHHHHHHHHHHHHCCCCEEE
T ss_conf 43---43------------------1---14582---------4444318999-----9999999999999839971379
Q ss_pred EEEECCEEEEEEECCC
Q ss_conf 9998996999962157
Q 000785 1271 GVLKDGLIYVVQARPQ 1286 (1287)
Q Consensus 1271 wai~dg~LyILQsRPq 1286 (1287)
|++++|+|||||+||.
T Consensus 352 wai~~G~LyILQaRP~ 367 (913)
T 1h6z_A 352 FTVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEEETTEEEEEEEEEC
T ss_pred EEEECCEEEEEEECCC
T ss_conf 9987997999984576
No 5
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=1.00 E-value=1 Score=334.09 Aligned_cols=268 Identities=19% Similarity=0.199 Sum_probs=181.7
Q ss_pred CCCEEEECC----CCCC---CCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHCC-CHHHHHHHHHHHHHH--
Q ss_conf 776036479----9798---755644186998454189965589950419789999998115-304999999998430--
Q 000785 969 RGKYAVSVE----DFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI-NKDIANKISRLYKFI-- 1038 (1287)
Q Consensus 969 ~~~~vi~l~----e~~~---~~vGgKAanLa~L~~~lp~gi~VP~GfvIPfgafe~fL~~~~-n~~L~~~I~~l~~~l-- 1038 (1287)
..+||+.|. |.+. ++||||+||||+|.+ .|+|||+||+||+.+|++|++.+. ...+.+.+......+
T Consensus 3 ~~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~~l~~~l~~le~ 79 (913)
T 2x0s_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEK 79 (913)
T ss_dssp CCCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHH---CCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77479987998756884526518388888999997---838999978633999999997289748999999999998899
Q ss_pred --C--CCCHH-----------------------H--H--HHHHHHHHCCC-----------------------CC-HHHH
Q ss_conf --8--99947-----------------------8--9--99999999289-----------------------99-9999
Q 000785 1039 --N--GGDLS-----------------------K--L--QEIQEAVLQMS-----------------------AP-LSLI 1063 (1287)
Q Consensus 1039 --~--~~d~~-----------------------~--L--~~IR~~I~~~~-----------------------lP-~el~ 1063 (1287)
. .++.. + + ..++.++...+ ++ ..+.
T Consensus 80 ~~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe 159 (913)
T 2x0s_A 80 EMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFE 159 (913)
T ss_dssp HHSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHH
T ss_pred HHHHHHCCCCCCCHHEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 85454178555302101025533577640557743465789999998679848899999999998777886477766589
Q ss_pred HHHHH--HHHHCCC-------CCCCCC------------------CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 99999--9880199-------999972------------------29999999999993389858999999819999776
Q 000785 1064 YELKN--KMRSSGM-------PWPGDE------------------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNL 1116 (1287)
Q Consensus 1064 ~eL~~--alRSSg~-------s~aG~~------------------g~e~i~~AIK~VWASlys~RAi~yRr~~GI~~~~v 1116 (1287)
..+.. +.|||+. +|+|+. ..++++.||+.||||+||+||+.||+.+|+++. +
T Consensus 160 ~~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~-~ 238 (913)
T 2x0s_A 160 EALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-L 238 (913)
T ss_dssp HHHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCC-C
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC-C
T ss_conf 999999986086643459888999999999999998738877767899999999999987358879999985699853-4
Q ss_pred CEEEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 2077998300775-----32999936999899865244134476551013556777159990578989830135653124
Q 000785 1117 CMAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIG 1191 (1287)
Q Consensus 1117 ~MAVLVQemV~ad-----~SGVlfT~nP~tgd~~ei~Ieav~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~ig 1191 (1287)
.+||.||.||.++ .|||+||+||.||++..+.+.+++||||.||+|.+ +|+.|...+... .+ ..+.++
T Consensus 239 ~laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~~~~~~---~~---~~~~~~ 311 (913)
T 2x0s_A 239 GTAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLR---WA---KAHGVG 311 (913)
T ss_dssp CCEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSHHHHHH---HH---HTTTCC
T ss_pred CCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCCCCCHHHH---HH---HHCCCC
T ss_conf 52238988644156764440589841888898767899835776840104777-872022104344---54---430333
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 56987146414999763100148970333526973210123589987787210159999999999999986099735999
Q 000785 1192 LYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEG 1271 (1287)
Q Consensus 1192 ~~~k~~ii~rsdsnGedLe~yagaG~~~svp~~~~~~~~vdys~~plLtD~e~r~~ll~~La~la~~IE~~fG~PQDIEw 1271 (1287)
. + . ....|.... +........|++++..||.+|+.||||||
T Consensus 312 ~---k-----------------------~--------~~~~~~~~~-----~~~p~~~~~l~~~~~~lE~hy~~~qdiE~ 352 (913)
T 2x0s_A 312 E---E-----------------------E--------RRKRYPSME-----EAMPENYRLLCDVRKRLENHYRDMQDLEF 352 (913)
T ss_dssp H---H-----------------------H--------HHHHSCCHH-----HHSHHHHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred C---C-----------------------C--------CCCCCCCHH-----HHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 0---0-----------------------2--------345566265-----55479999999999999986384877578
Q ss_pred EEECCEEEEEEECCC
Q ss_conf 998996999962157
Q 000785 1272 VLKDGLIYVVQARPQ 1286 (1287)
Q Consensus 1272 ai~dg~LyILQsRPq 1286 (1287)
++++|+||+||+||.
T Consensus 353 a~~~g~l~ilq~R~~ 367 (913)
T 2x0s_A 353 TVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred HHCCCCHHHHHHHHC
T ss_conf 760772698775222
No 6
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=1.00 E-value=1 Score=49.21 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=69.2
Q ss_pred CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEE-
Q ss_conf 8277530158899999322001122346899299993777754568--7717996699999650110100368720678-
Q 000785 834 CWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT- 910 (1287)
Q Consensus 834 ~wqvispG~A~G~L~~V~~l~~v~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at- 910 (1287)
.-..++||.+.|+++++....+.. ....+.||+.+.++- +++| ..++||||..-. ..||.+|.||.+|||-+.
T Consensus 362 ~G~~~~~g~~~G~v~~~~~~~~~~--~~~~g~ILv~~~~~p-~~~~~~~~~~givt~~Gg-~tSHaAivar~~giP~vvg 437 (794)
T 2ols_A 362 EGRAIGQKVGQGKVRLIKDASEMD--SVEAGDVLVTDMTDP-DWEPVMKRASAIVTNRGG-RTCHAAIIARELGIPAVVG 437 (794)
T ss_dssp BCBC--CCCCCBCBC----------------CEEEESCCCG-GGSHHHHTCSEEEESSCC-TTCHHHHHTTC---CEEEC
T ss_pred CCCCCCCCCCEEEEEEECCHHHHH--HCCCCEEEEECCCCH-HHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCEEEC
T ss_conf 363157874069999964789997--567874999778998-999977647099984897-5149999986779999985
Q ss_pred ECCHHHHHHHHHCCCCEEEE---EECCCCEEEEE
Q ss_conf 32548888876408972999---98278359953
Q 000785 911 CFDQNILRNLRLKEGKAVSI---RLKSTNLIISD 941 (1287)
Q Consensus 911 ~~d~~~~~~l~~l~Gk~V~l---~vss~~v~l~~ 941 (1287)
|.+ .... -.+|+.|.+ ..+...|...+
T Consensus 438 ~~~--~~~~--~~~G~~v~v~c~Dg~~G~v~~g~ 467 (794)
T 2ols_A 438 CGN--ATEL--LKNGQEVTVSCAEGDTGFIYAGL 467 (794)
T ss_dssp CTT--HHHH--SCSSCCEECCCC--CCCBCEECC
T ss_pred CCC--HHHC--CCCCCEEEEEECCCCCCEEEECC
T ss_conf 754--5650--65897899996689863699688
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=1.00 E-value=1 Score=49.14 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=67.4
Q ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf 77530158899999322001122346899299993777754568--7717996699999650110100368720678325
Q 000785 836 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 913 (1287)
Q Consensus 836 qvispG~A~G~L~~V~~l~~v~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at~~d 913 (1287)
..++||.+.|+++++....+.. .....+.||+++..+-.+ +| ..++||+|..-+ ..||.+++||++|||-+.--.
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~~-~~~~~g~ILVa~~l~Ps~-~~~l~~~~Givt~~Gg-~tSHaAIlAR~lgIPaVvG~~ 558 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEAR-QKMVDGGILVTVSTDADM-MPAIEKAAAIITEEGG-LTSHAAVVGLSLGIPVIVGVE 558 (587)
T ss_dssp EEESSCEECCBEEECSSHHHHH-HHCCTTCEEEESCCCGGG-HHHHTTCSEEEESSCC-TTSHHHHHHHHHTCCEEECCT
T ss_pred CCCCCCEEEEEEEEECCHHHHH-HCCCCCEEEEECCCCHHH-HHHHHHCEEEEECCCC-CCCHHHHHHHHCCCCEEEECC
T ss_conf 3011875875179958878886-258998599987799899-9977751799976898-767999998875998899344
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEE
Q ss_conf 48888876408972999982783599
Q 000785 914 QNILRNLRLKEGKAVSIRLKSTNLII 939 (1287)
Q Consensus 914 ~~~~~~l~~l~Gk~V~l~vss~~v~l 939 (1287)
++...+ .+|+.|.+......+..
T Consensus 559 -~~~~~l--~~G~~v~vDg~~G~V~~ 581 (587)
T 2e28_A 559 -NATTLF--KDGQEITVDGGFGAVYR 581 (587)
T ss_dssp -THHHHS--CTTCBEEEETTTTEEEE
T ss_pred -CHHHHC--CCCCEEEEECCCCEEEE
T ss_conf -088727--79989999999999998
No 8
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=1.00 E-value=1 Score=47.68 Aligned_cols=104 Identities=18% Similarity=0.259 Sum_probs=64.3
Q ss_pred CCCEEEEEEEEEEEEEEECCCCCCCC-CCCCCCEEEEEECCCCCCCCCC--CCEEEECCCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 98277530158899999322001122-3468992999937777545687--71799669999965011010036872067
Q 000785 833 GCWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFA 909 (1287)
Q Consensus 833 ~~wqvispG~A~G~L~~V~~l~~v~~-~~~~~p~Ili~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~a 909 (1287)
..-...+||.+.|++++ ...+... ....+|.|||...++= +++|. .+.||||..-+ ..||.+|.||++|||-+
T Consensus 396 ~~G~~as~G~a~G~vv~--~~~~~~~~~~~g~~~ILV~~~t~P-~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~V 471 (876)
T 1vbg_A 396 ATGLPASPGAAVGQVVF--TAEDAEAWHSQGKAAILVRAETSP-EDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCV 471 (876)
T ss_dssp EECEEEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESCCCT-TSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEE
T ss_pred ECCCCCCCCEEEEEEEE--CHHHHHHHHHCCCCEEEEECCCCH-HHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCEE
T ss_conf 04744689818999997--789999875145987999827998-999767656389977898-76699999867599999
Q ss_pred E-ECCHHHHH---------HHHHCCCCEEEEEECCCCEEEEE
Q ss_conf 8-32548888---------87640897299998278359953
Q 000785 910 T-CFDQNILR---------NLRLKEGKAVSIRLKSTNLIISD 941 (1287)
Q Consensus 910 t-~~d~~~~~---------~l~~l~Gk~V~l~vss~~v~l~~ 941 (1287)
. |.+.. ++ .-.-.+|..|.+..+...|.+.+
T Consensus 472 vG~~~~~-~~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 512 (876)
T 1vbg_A 472 SGCSGIR-VNDAEKLVTIGGHVLREGEWLSLNGSTGEVILGK 512 (876)
T ss_dssp ECCTTEE-EEGGGTEEEETTEEEETTCEEEEETTTTEEEESC
T ss_pred ECCCCCE-ECCCCCEEEECCEEECCCCEEEEECCCCEEEECC
T ss_conf 8578755-4011466876784623898899989988799798
No 9
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=1.00 E-value=1 Score=47.54 Aligned_cols=105 Identities=18% Similarity=0.235 Sum_probs=64.8
Q ss_pred CCCCEEEEEEEEEEEEEEECCCCCCCC-CCCCCCEEEEEECCCCCCCCCC--CCEEEECCCCCCCCCHHHHHCCCCCCEE
Q ss_conf 898277530158899999322001122-3468992999937777545687--7179966999996501101003687206
Q 000785 832 LGCWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCF 908 (1287)
Q Consensus 832 ~~~wqvispG~A~G~L~~V~~l~~v~~-~~~~~p~Ili~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~ 908 (1287)
+..=...+||.+.|++++ + ..+... .....|.|||...++ -++++. .+.||||..-+ ..||.+|.||++|||-
T Consensus 391 l~~G~~as~G~a~G~vv~-~-~~~a~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~ 466 (873)
T 1kbl_A 391 IGSALPASPGAAAGKVYF-T-ADEAKAAHEKGERVILVRLETS-PEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCC 466 (873)
T ss_dssp EEECEEEECSEEEEEEES-S-HHHHHHHHHTTCCEEEEESSCC-GGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEE
T ss_pred ECCCCCCCCCEEEEEEEE-C-HHHHHHHHCCCCCEEEEECCCC-HHHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCE
T ss_conf 205820468638999998-4-8898776325798799978899-8999978762389966898-7669999986769999
Q ss_pred EE-ECCHHHHH---------HHHHCCCCEEEEEECCCCEEEEE
Q ss_conf 78-32548888---------87640897299998278359953
Q 000785 909 AT-CFDQNILR---------NLRLKEGKAVSIRLKSTNLIISD 941 (1287)
Q Consensus 909 at-~~d~~~~~---------~l~~l~Gk~V~l~vss~~v~l~~ 941 (1287)
+. |.+.. ++ .-.-.+|..|.+..+...|.+.+
T Consensus 467 VvG~~~~~-i~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 508 (873)
T 1kbl_A 467 VSGCGEIK-INEEAKTFELGGHTFAEGDYISLDGSTGKIYKGD 508 (873)
T ss_dssp EECCTTCE-EETTTTEEEETTEEEETTCEEEEETTTCEEEESC
T ss_pred EECCCCCE-ECCCCCEEEECCEEECCCCEEEEECCCCEEEECC
T ss_conf 98578754-3011467876785624898899989988799798
No 10
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=1.00 E-value=1 Score=47.24 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=67.5
Q ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf 77530158899999322001122346899299993777754568--7717996699999650110100368720678325
Q 000785 836 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 913 (1287)
Q Consensus 836 qvispG~A~G~L~~V~~l~~v~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at~~d 913 (1287)
+.+++|.+.|+++++....+.. ..+..+.||+++..+-. +++ ..++||+|..-+ ..||.+++||++|||-+.--.
T Consensus 501 ~~i~~G~v~G~v~vv~~~~da~-~~~~~g~ILVa~~l~Ps-~~~~l~~v~GiVte~Gg-~tSHaAIlAR~lgIPaVvG~~ 577 (606)
T 3t05_A 501 QGIGRGSVVGTTLVAETVKDLE-GKDLSDKVIVTNSIDET-FVPYVEKALGLITEENG-ITSPSAIVGLEKGIPTVVGVE 577 (606)
T ss_dssp EEESSCEEEEEEEECSSGGGGS-SSCCSSEEEEESCCCTT-THHHHTTSSEEEESSCC-SSSHHHHHHHHTTCCEEECCT
T ss_pred CCCCCCEEEEEEEEECCHHHHH-HCCCCCEEEEECCCCHH-HHHHHHHHEEEEECCCC-CCCHHHHHHHHCCCCEEEECC
T ss_conf 5321204899999978867886-45898869998889989-99998863799863798-556899997547999999264
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEE
Q ss_conf 48888876408972999982783599
Q 000785 914 QNILRNLRLKEGKAVSIRLKSTNLII 939 (1287)
Q Consensus 914 ~~~~~~l~~l~Gk~V~l~vss~~v~l 939 (1287)
. ... .-.+|+.|.+.... |..+
T Consensus 578 ~-a~~--~l~~G~~V~vDg~~-G~V~ 599 (606)
T 3t05_A 578 K-AVK--NISNNVLVTIDAAQ-GKIF 599 (606)
T ss_dssp T-HHH--HSCSSCEEEEETTT-TEEE
T ss_pred C-HHH--HCCCCCEEEEECCC-CEEE
T ss_conf 2-786--17799999999999-9899
Done!