Query 000787
Match_columns 1286
No_of_seqs 831 out of 6419
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 23:38:44 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000787.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000787hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 8E-227 2E-231 2075.7 84.5 1173 36-1286 12-1206(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-206 3E-211 2034.5 123.4 1264 19-1286 19-1298(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-163 4E-168 1630.1 117.2 1126 94-1286 3-1180(1394)
4 KOG0061 Transporter, ABC super 100.0 7.2E-82 1.6E-86 780.9 57.2 583 114-775 21-608 (613)
5 PLN03211 ABC transporter G-25; 100.0 6.1E-81 1.3E-85 780.8 63.5 609 114-775 35-658 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 3.3E-81 7.2E-86 784.7 58.4 569 162-774 35-612 (617)
7 PLN03140 ABC transporter G fam 100.0 4.8E-79 1E-83 812.9 62.6 595 111-776 860-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 4.5E-79 9.8E-84 761.5 45.7 842 78-1093 314-1208(1228)
9 TIGR00956 3a01205 Pleiotropic 100.0 5.2E-73 1.1E-77 759.2 59.9 577 116-774 757-1389(1394)
10 KOG0065 Pleiotropic drug resis 100.0 1.2E-75 2.6E-80 728.0 31.1 560 163-775 802-1383(1391)
11 TIGR01257 rim_protein retinal- 100.0 2.4E-71 5.1E-76 737.7 70.9 224 855-1105 1937-2162(2272)
12 KOG0061 Transporter, ABC super 100.0 5.7E-73 1.2E-77 701.6 39.8 410 852-1285 22-439 (613)
13 KOG0054 Multidrug resistance-a 100.0 7.8E-71 1.7E-75 704.6 51.9 809 78-1094 483-1358(1381)
14 PLN03130 ABC transporter C fam 100.0 2.5E-68 5.4E-73 720.7 60.2 212 854-1094 1236-1457(1622)
15 PTZ00265 multidrug resistance 100.0 1.2E-68 2.6E-73 717.2 50.5 217 854-1093 1164-1447(1466)
16 PLN03232 ABC transporter C fam 100.0 2.3E-67 4.9E-72 712.1 59.8 211 854-1093 1233-1453(1495)
17 COG1123 ATPase components of v 100.0 5.1E-67 1.1E-71 615.7 50.0 491 118-1093 5-514 (539)
18 PLN03211 ABC transporter G-25; 100.0 1.6E-67 3.4E-72 660.0 43.8 420 852-1286 36-489 (659)
19 TIGR00957 MRP_assoc_pro multi 100.0 5E-65 1.1E-69 690.2 64.6 211 854-1093 1283-1503(1522)
20 TIGR00955 3a01204 The Eye Pigm 100.0 7.9E-67 1.7E-71 654.9 40.6 397 880-1286 37-443 (617)
21 PRK13549 xylose transporter AT 100.0 2.7E-65 5.9E-70 630.0 49.1 457 166-1095 19-491 (506)
22 PRK10762 D-ribose transporter 100.0 6.7E-65 1.5E-69 625.8 48.8 449 166-1095 18-481 (501)
23 PRK09700 D-allose transporter 100.0 4.9E-65 1.1E-69 628.8 47.5 457 166-1093 19-493 (510)
24 PRK10261 glutathione transport 100.0 2.4E-64 5.2E-69 633.1 52.1 490 165-1093 29-548 (623)
25 TIGR03269 met_CoM_red_A2 methy 100.0 6.1E-64 1.3E-68 620.5 51.9 217 856-1093 280-512 (520)
26 PRK15134 microcin C ABC transp 100.0 6.7E-64 1.5E-68 620.9 51.2 464 165-1093 22-510 (529)
27 PRK15439 autoinducer 2 ABC tra 100.0 5.4E-64 1.2E-68 618.1 49.0 452 166-1094 25-488 (510)
28 TIGR02633 xylG D-xylose ABC tr 100.0 1.8E-63 4E-68 613.7 50.7 457 166-1093 15-487 (500)
29 PRK11288 araG L-arabinose tran 100.0 1.7E-63 3.8E-68 613.2 49.2 450 166-1095 18-482 (501)
30 TIGR01271 CFTR_protein cystic 100.0 1.7E-62 3.7E-67 663.5 63.0 210 854-1093 1216-1435(1490)
31 PTZ00243 ABC transporter; Prov 100.0 3E-62 6.4E-67 661.0 62.1 211 854-1093 1307-1528(1560)
32 PRK10982 galactose/methyl gala 100.0 3.3E-62 7.1E-67 600.9 48.3 450 165-1094 11-476 (491)
33 PRK10938 putative molybdenum t 100.0 2E-61 4.4E-66 594.0 43.7 214 855-1090 260-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 1.5E-59 3.2E-64 517.8 44.6 469 164-1093 22-511 (534)
35 PRK11819 putative ABC transpor 100.0 1.2E-58 2.6E-63 576.0 57.2 201 855-1092 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 9.5E-59 2.1E-63 575.0 50.7 198 855-1093 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.9E-58 8.5E-63 571.3 55.3 201 855-1092 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 2.5E-56 5.5E-61 560.8 50.6 197 855-1093 312-512 (638)
39 PRK11147 ABC transporter ATPas 100.0 1.1E-55 2.3E-60 556.7 51.9 202 855-1093 319-523 (635)
40 PRK13409 putative ATPase RIL; 100.0 6.7E-56 1.4E-60 548.8 42.7 211 855-1107 340-554 (590)
41 COG1129 MglA ABC-type sugar tr 100.0 1.7E-54 3.7E-59 507.1 42.7 449 164-1092 20-484 (500)
42 PLN03073 ABC transporter F fam 100.0 1.4E-53 3E-58 536.6 46.3 200 855-1093 508-709 (718)
43 COG0488 Uup ATPase components 100.0 2E-52 4.3E-57 503.8 46.2 218 165-412 16-238 (530)
44 COG3845 ABC-type uncharacteriz 100.0 2.5E-50 5.4E-55 460.7 39.5 458 164-1095 16-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.9E-44 4.2E-49 372.6 21.7 214 856-1093 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 3.4E-44 7.5E-49 370.7 22.0 220 164-435 14-238 (240)
47 KOG0927 Predicted transporter 100.0 8.9E-43 1.9E-47 399.0 32.9 202 854-1093 388-591 (614)
48 COG1135 AbcC ABC-type metal io 100.0 4E-42 8.6E-47 372.7 22.9 224 163-437 17-246 (339)
49 COG1125 OpuBA ABC-type proline 100.0 2.2E-42 4.8E-47 363.2 20.2 209 165-414 14-225 (309)
50 COG1131 CcmA ABC-type multidru 100.0 4.9E-42 1.1E-46 391.2 24.5 223 856-1106 5-230 (293)
51 COG1127 Ttg2A ABC-type transpo 100.0 5.2E-42 1.1E-46 359.9 22.2 231 855-1109 8-250 (263)
52 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8.6E-42 1.9E-46 370.2 23.3 217 855-1095 4-224 (254)
53 COG1135 AbcC ABC-type metal io 100.0 4.6E-42 1E-46 372.1 19.9 219 856-1094 2-227 (339)
54 COG1120 FepC ABC-type cobalami 100.0 5.5E-42 1.2E-46 373.9 20.7 218 855-1094 2-224 (258)
55 KOG0058 Peptide exporter, ABC 100.0 1.6E-42 3.6E-47 412.8 17.7 255 78-414 431-691 (716)
56 COG1116 TauB ABC-type nitrate/ 100.0 9.7E-42 2.1E-46 364.3 21.6 204 855-1084 3-207 (248)
57 COG3839 MalK ABC-type sugar tr 100.0 1.6E-41 3.4E-46 384.0 23.1 217 167-434 18-235 (338)
58 COG3842 PotA ABC-type spermidi 100.0 2.9E-41 6.2E-46 383.9 22.7 222 165-436 18-240 (352)
59 COG1120 FepC ABC-type cobalami 100.0 1.7E-41 3.7E-46 370.1 19.9 210 165-413 15-227 (258)
60 COG1136 SalX ABC-type antimicr 100.0 7.8E-41 1.7E-45 358.0 22.8 193 881-1085 18-219 (226)
61 COG1125 OpuBA ABC-type proline 100.0 2.9E-41 6.2E-46 354.8 18.4 213 856-1093 2-220 (309)
62 COG3638 ABC-type phosphate/pho 100.0 3.2E-41 6.9E-46 353.1 17.8 220 855-1095 3-234 (258)
63 COG1116 TauB ABC-type nitrate/ 100.0 1.2E-40 2.7E-45 355.8 22.1 192 165-401 16-207 (248)
64 COG1131 CcmA ABC-type multidru 100.0 2.8E-40 6E-45 376.8 25.6 212 164-418 17-230 (293)
65 COG1127 Ttg2A ABC-type transpo 100.0 2.6E-40 5.7E-45 347.1 22.2 209 165-414 21-235 (263)
66 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-40 2.3E-45 360.4 19.6 223 164-435 14-240 (345)
67 COG1118 CysA ABC-type sulfate/ 100.0 7.5E-41 1.6E-45 361.6 18.4 205 880-1094 14-223 (345)
68 COG4555 NatA ABC-type Na+ tran 100.0 8.8E-41 1.9E-45 339.8 14.4 200 882-1093 16-217 (245)
69 COG2274 SunT ABC-type bacterio 100.0 2.3E-40 5.1E-45 411.5 21.2 258 78-414 436-696 (709)
70 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8.5E-40 1.8E-44 354.7 22.6 223 117-414 3-227 (254)
71 COG1117 PstB ABC-type phosphat 100.0 5.7E-40 1.2E-44 337.3 18.9 220 166-433 21-248 (253)
72 COG3839 MalK ABC-type sugar tr 100.0 8.2E-40 1.8E-44 370.1 21.4 215 855-1094 3-219 (338)
73 COG3638 ABC-type phosphate/pho 100.0 1.5E-39 3.3E-44 340.5 21.7 215 165-414 17-237 (258)
74 COG3842 PotA ABC-type spermidi 100.0 6.8E-40 1.5E-44 372.6 19.7 216 855-1094 5-222 (352)
75 COG2884 FtsE Predicted ATPase 100.0 9.1E-40 2E-44 330.1 18.2 213 856-1092 2-220 (223)
76 PRK13537 nodulation ABC transp 100.0 5.9E-39 1.3E-43 369.4 26.2 215 854-1093 6-222 (306)
77 COG4555 NatA ABC-type Na+ tran 100.0 1.1E-39 2.5E-44 331.8 17.0 206 165-414 15-222 (245)
78 COG1117 PstB ABC-type phosphat 100.0 2E-39 4.3E-44 333.3 18.4 217 855-1093 7-232 (253)
79 COG1136 SalX ABC-type antimicr 100.0 5.7E-39 1.2E-43 343.7 22.1 196 165-403 18-220 (226)
80 KOG0057 Mitochondrial Fe/S clu 100.0 3.9E-39 8.4E-44 371.1 20.4 229 110-414 343-574 (591)
81 KOG0055 Multidrug/pheromone ex 100.0 2.9E-39 6.3E-44 405.1 20.8 258 78-414 951-1213(1228)
82 TIGR02314 ABC_MetN D-methionin 100.0 2.6E-38 5.5E-43 366.9 27.3 206 165-413 18-229 (343)
83 TIGR03265 PhnT2 putative 2-ami 100.0 2.9E-38 6.2E-43 369.1 26.8 206 166-414 18-224 (353)
84 cd03261 ABC_Org_Solvent_Resist 100.0 2.5E-38 5.5E-43 352.2 24.8 213 857-1093 2-221 (235)
85 TIGR02314 ABC_MetN D-methionin 100.0 2.6E-38 5.7E-43 366.8 25.7 217 856-1093 2-225 (343)
86 PRK11432 fbpC ferric transport 100.0 3.4E-38 7.4E-43 367.8 26.8 205 166-413 20-225 (351)
87 PRK11650 ugpC glycerol-3-phosp 100.0 3.3E-38 7.2E-43 369.0 26.5 205 166-413 18-223 (356)
88 TIGR03258 PhnT 2-aminoethylpho 100.0 4.2E-38 9.1E-43 368.2 27.1 206 166-413 19-227 (362)
89 TIGR03265 PhnT2 putative 2-ami 100.0 3.7E-38 7.9E-43 368.3 25.1 215 855-1094 4-220 (353)
90 PRK11650 ugpC glycerol-3-phosp 100.0 3.6E-38 7.8E-43 368.7 24.8 215 856-1094 4-220 (356)
91 PRK13537 nodulation ABC transp 100.0 8E-38 1.7E-42 360.1 26.9 205 166-414 21-227 (306)
92 PRK09452 potA putrescine/sperm 100.0 8E-38 1.7E-42 367.0 26.9 217 166-433 28-245 (375)
93 KOG0056 Heavy metal exporter H 100.0 2.4E-39 5.2E-44 362.7 13.1 257 78-414 502-761 (790)
94 PRK11432 fbpC ferric transport 100.0 6.8E-38 1.5E-42 365.3 25.9 215 855-1094 6-222 (351)
95 PRK13536 nodulation factor exp 100.0 1E-37 2.2E-42 362.7 26.9 215 854-1093 40-256 (340)
96 TIGR03258 PhnT 2-aminoethylpho 100.0 9.4E-38 2E-42 365.2 25.5 215 855-1094 5-224 (362)
97 cd03259 ABC_Carb_Solutes_like 100.0 9.3E-38 2E-42 342.4 23.7 210 857-1091 2-213 (213)
98 COG1122 CbiO ABC-type cobalt t 100.0 4.1E-38 8.9E-43 344.2 20.6 214 856-1093 4-223 (235)
99 TIGR01257 rim_protein retinal- 100.0 1.7E-35 3.7E-40 395.8 49.7 216 854-1093 927-1144(2272)
100 COG1124 DppF ABC-type dipeptid 100.0 8.7E-38 1.9E-42 330.3 22.0 205 166-414 21-231 (252)
101 COG1122 CbiO ABC-type cobalt t 100.0 6.8E-38 1.5E-42 342.5 22.0 207 165-414 17-228 (235)
102 cd03261 ABC_Org_Solvent_Resist 100.0 2E-37 4.3E-42 345.0 25.7 206 166-413 14-225 (235)
103 PRK10851 sulfate/thiosulfate t 100.0 2E-37 4.4E-42 362.0 26.9 209 166-413 16-225 (353)
104 COG2884 FtsE Predicted ATPase 100.0 5.1E-38 1.1E-42 317.4 18.5 200 165-408 15-220 (223)
105 COG1132 MdlB ABC-type multidru 100.0 4.7E-38 1E-42 393.8 22.2 255 78-414 295-552 (567)
106 PRK10851 sulfate/thiosulfate t 100.0 1.6E-37 3.5E-42 362.9 25.2 216 856-1093 3-221 (353)
107 TIGR01186 proV glycine betaine 100.0 1.7E-37 3.7E-42 361.8 25.4 207 165-414 6-219 (363)
108 TIGR01188 drrA daunorubicin re 100.0 1.1E-37 2.4E-42 359.1 23.5 202 880-1093 5-208 (302)
109 TIGR00960 3a0501s02 Type II (G 100.0 1.6E-37 3.4E-42 341.4 23.3 208 856-1086 2-215 (216)
110 cd03269 ABC_putative_ATPase Th 100.0 2.1E-37 4.5E-42 338.9 24.0 209 857-1091 2-210 (210)
111 PRK11607 potG putrescine trans 100.0 3.5E-37 7.6E-42 362.3 27.6 205 166-413 33-238 (377)
112 COG3840 ThiQ ABC-type thiamine 100.0 3.8E-38 8.3E-43 315.3 16.4 196 886-1093 17-214 (231)
113 TIGR01288 nodI ATP-binding ABC 100.0 2.4E-37 5.2E-42 356.6 25.5 214 855-1093 4-219 (303)
114 COG3840 ThiQ ABC-type thiamine 100.0 6.6E-38 1.4E-42 313.6 17.8 201 170-413 17-218 (231)
115 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.7E-37 5.8E-42 340.5 24.6 215 857-1093 2-218 (220)
116 cd03265 ABC_DrrA DrrA is the A 100.0 2.8E-37 6.1E-42 340.3 24.6 212 857-1093 2-216 (220)
117 PRK09452 potA putrescine/sperm 100.0 2.6E-37 5.7E-42 362.6 25.8 214 855-1093 14-229 (375)
118 PRK11174 cysteine/glutathione 100.0 1.2E-37 2.6E-42 392.3 24.5 255 78-414 314-572 (588)
119 cd03219 ABC_Mj1267_LivG_branch 100.0 3.2E-37 6.8E-42 343.8 24.8 215 857-1093 2-227 (236)
120 cd03301 ABC_MalK_N The N-termi 100.0 3E-37 6.5E-42 338.4 24.1 210 857-1091 2-213 (213)
121 PRK11000 maltose/maltodextrin 100.0 4.6E-37 1E-41 361.8 27.3 205 166-413 17-222 (369)
122 COG0410 LivF ABC-type branched 100.0 2.3E-37 5.1E-42 325.0 22.0 206 165-414 16-226 (237)
123 PRK11153 metN DL-methionine tr 100.0 3.9E-37 8.4E-42 359.7 25.5 217 856-1093 2-225 (343)
124 cd03218 ABC_YhbG The ABC trans 100.0 4.3E-37 9.4E-42 341.7 24.4 212 857-1093 2-217 (232)
125 COG1124 DppF ABC-type dipeptid 100.0 1.5E-37 3.3E-42 328.5 19.6 217 855-1094 3-227 (252)
126 KOG0058 Peptide exporter, ABC 100.0 2.7E-36 5.9E-41 359.8 32.7 222 846-1092 455-685 (716)
127 cd03266 ABC_NatA_sodium_export 100.0 3.4E-37 7.3E-42 339.3 23.2 215 856-1091 2-218 (218)
128 cd03296 ABC_CysA_sulfate_impor 100.0 6.1E-37 1.3E-41 342.0 25.4 216 856-1093 3-221 (239)
129 PRK11000 maltose/maltodextrin 100.0 4.6E-37 9.9E-42 361.9 25.5 214 855-1093 3-218 (369)
130 COG2274 SunT ABC-type bacterio 100.0 2.8E-36 6.1E-41 375.1 33.8 217 849-1093 465-691 (709)
131 PRK11607 potG putrescine trans 100.0 7.5E-37 1.6E-41 359.5 27.1 214 855-1093 19-234 (377)
132 PRK11153 metN DL-methionine tr 100.0 8.9E-37 1.9E-41 356.6 27.4 206 165-413 18-229 (343)
133 COG1137 YhbG ABC-type (unclass 100.0 3.9E-38 8.4E-43 320.2 13.7 206 879-1094 15-224 (243)
134 PRK13536 nodulation factor exp 100.0 6.2E-37 1.3E-41 356.2 25.7 205 166-414 55-261 (340)
135 PRK09536 btuD corrinoid ABC tr 100.0 4.2E-37 9.2E-42 362.7 24.7 218 855-1094 3-224 (402)
136 cd03268 ABC_BcrA_bacitracin_re 100.0 4.5E-37 9.6E-42 335.8 22.9 206 857-1091 2-208 (208)
137 TIGR01186 proV glycine betaine 100.0 4.2E-37 9.2E-42 358.5 24.1 202 880-1093 5-214 (363)
138 TIGR03522 GldA_ABC_ATP gliding 100.0 6.2E-37 1.3E-41 352.6 25.1 212 856-1093 3-216 (301)
139 cd03260 ABC_PstB_phosphate_tra 100.0 4.7E-37 1E-41 340.2 23.1 213 857-1093 2-224 (227)
140 cd03234 ABCG_White The White s 100.0 8.7E-37 1.9E-41 337.8 25.0 221 856-1091 4-226 (226)
141 cd03258 ABC_MetN_methionine_tr 100.0 6.5E-37 1.4E-41 340.5 23.7 217 856-1093 2-225 (233)
142 cd03256 ABC_PhnC_transporter A 100.0 5.7E-37 1.2E-41 342.8 23.4 216 857-1093 2-229 (241)
143 cd03259 ABC_Carb_Solutes_like 100.0 8.6E-37 1.9E-41 334.8 24.0 199 166-407 14-213 (213)
144 PRK13637 cbiO cobalt transport 100.0 1.4E-36 3E-41 347.3 26.6 218 165-425 20-248 (287)
145 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.4E-37 1.4E-41 337.1 22.7 208 856-1084 1-216 (218)
146 PRK09493 glnQ glutamine ABC tr 100.0 1.2E-36 2.6E-41 339.8 25.2 214 856-1093 2-220 (240)
147 cd03226 ABC_cobalt_CbiO_domain 100.0 4.6E-37 1E-41 334.9 20.8 192 881-1088 13-205 (205)
148 cd03265 ABC_DrrA DrrA is the A 100.0 1.6E-36 3.5E-41 334.3 25.1 204 166-412 14-219 (220)
149 cd03296 ABC_CysA_sulfate_impor 100.0 2.1E-36 4.5E-41 337.7 26.2 209 166-413 16-225 (239)
150 PRK11264 putative amino-acid A 100.0 1.6E-36 3.4E-41 341.1 25.3 214 856-1093 4-228 (250)
151 PRK13637 cbiO cobalt transport 100.0 1.2E-36 2.5E-41 348.0 24.6 218 856-1093 3-229 (287)
152 PRK11629 lolD lipoprotein tran 100.0 1.8E-36 4E-41 336.8 25.5 217 855-1093 5-229 (233)
153 TIGR01188 drrA daunorubicin re 100.0 8.7E-37 1.9E-41 351.7 23.7 206 165-414 6-213 (302)
154 cd03263 ABC_subfamily_A The AB 100.0 1E-36 2.2E-41 335.9 23.2 214 856-1093 1-216 (220)
155 TIGR02673 FtsE cell division A 100.0 1E-36 2.3E-41 334.4 22.7 206 856-1084 2-213 (214)
156 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.4E-36 3E-41 339.7 24.0 213 857-1093 2-220 (242)
157 TIGR01288 nodI ATP-binding ABC 100.0 2.4E-36 5.2E-41 348.3 26.3 205 166-414 18-224 (303)
158 cd03292 ABC_FtsE_transporter F 100.0 1.4E-36 3E-41 333.5 22.7 206 857-1086 2-213 (214)
159 PRK13634 cbiO cobalt transport 100.0 2.5E-36 5.5E-41 345.7 25.8 218 165-425 20-249 (290)
160 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-36 2.6E-41 335.9 22.3 210 857-1093 2-216 (222)
161 cd03219 ABC_Mj1267_LivG_branch 100.0 2.4E-36 5.3E-41 336.6 24.8 214 166-413 14-231 (236)
162 TIGR02315 ABC_phnC phosphonate 100.0 9.5E-37 2.1E-41 341.4 21.7 217 856-1093 2-230 (243)
163 cd03258 ABC_MetN_methionine_tr 100.0 2.7E-36 5.9E-41 335.5 25.1 205 166-413 19-229 (233)
164 PRK13647 cbiO cobalt transport 100.0 1.8E-36 4E-41 344.2 24.2 215 855-1093 4-222 (274)
165 PRK13643 cbiO cobalt transport 100.0 3.8E-36 8.3E-41 343.9 26.9 224 166-433 20-255 (288)
166 COG0411 LivG ABC-type branched 100.0 4.3E-37 9.4E-42 325.4 17.5 221 163-414 15-239 (250)
167 PRK11248 tauB taurine transpor 100.0 2.9E-36 6.3E-41 339.0 25.4 212 856-1093 2-215 (255)
168 cd03301 ABC_MalK_N The N-termi 100.0 2.9E-36 6.4E-41 330.6 24.7 199 166-407 14-213 (213)
169 PRK11831 putative ABC transpor 100.0 2.8E-36 6.1E-41 342.1 25.3 215 855-1093 7-228 (269)
170 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.7E-36 3.8E-41 343.7 23.5 203 879-1093 35-245 (269)
171 COG4988 CydD ABC-type transpor 100.0 1.2E-36 2.7E-41 357.0 22.8 255 79-414 285-543 (559)
172 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 9.3E-37 2E-41 390.2 23.9 253 78-414 418-673 (686)
173 COG4559 ABC-type hemin transpo 100.0 9.2E-37 2E-41 312.9 18.9 206 166-413 15-229 (259)
174 cd03264 ABC_drug_resistance_li 100.0 2.3E-36 5E-41 330.9 23.3 208 857-1091 2-211 (211)
175 TIGR00960 3a0501s02 Type II (G 100.0 2E-36 4.2E-41 332.7 22.7 194 166-403 17-216 (216)
176 KOG0062 ATPase component of AB 100.0 8.8E-36 1.9E-40 340.0 28.6 205 852-1092 359-563 (582)
177 PRK13634 cbiO cobalt transport 100.0 2.2E-36 4.7E-41 346.3 23.8 218 856-1093 3-230 (290)
178 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.3E-36 9.4E-41 330.9 25.1 201 165-410 17-219 (220)
179 cd03218 ABC_YhbG The ABC trans 100.0 4E-36 8.6E-41 334.0 24.9 204 166-413 14-221 (232)
180 PRK10619 histidine/lysine/argi 100.0 4.8E-36 1E-40 338.3 25.9 215 855-1093 5-236 (257)
181 PRK13643 cbiO cobalt transport 100.0 3.1E-36 6.7E-41 344.7 24.5 217 856-1093 2-228 (288)
182 PRK13651 cobalt transporter AT 100.0 2.7E-36 5.9E-41 346.6 24.0 218 856-1093 3-249 (305)
183 TIGR03522 GldA_ABC_ATP gliding 100.0 5.7E-36 1.2E-40 344.6 26.6 204 166-414 16-221 (301)
184 PRK10895 lipopolysaccharide AB 100.0 3.2E-36 7E-41 336.6 23.8 214 856-1093 4-221 (241)
185 cd03257 ABC_NikE_OppD_transpor 100.0 3.2E-36 6.9E-41 333.9 23.6 217 856-1091 2-228 (228)
186 COG4152 ABC-type uncharacteriz 100.0 7.3E-37 1.6E-41 319.6 17.2 202 879-1093 13-214 (300)
187 cd03262 ABC_HisP_GlnQ_permease 100.0 3E-36 6.4E-41 330.6 23.1 206 857-1086 2-212 (213)
188 cd03260 ABC_PstB_phosphate_tra 100.0 2.7E-36 5.8E-41 334.2 22.7 203 166-411 14-226 (227)
189 TIGR00972 3a0107s01c2 phosphat 100.0 5.3E-36 1.1E-40 336.1 25.3 214 856-1093 2-227 (247)
190 PRK10908 cell division protein 100.0 4.1E-36 9E-41 331.5 24.1 208 856-1087 2-215 (222)
191 PRK13636 cbiO cobalt transport 100.0 4.1E-36 9E-41 343.0 24.6 216 855-1094 5-227 (283)
192 cd03235 ABC_Metallic_Cations A 100.0 2E-36 4.4E-41 331.9 21.2 199 881-1091 12-213 (213)
193 PRK13631 cbiO cobalt transport 100.0 3.4E-36 7.3E-41 347.8 24.1 218 855-1093 21-260 (320)
194 COG1137 YhbG ABC-type (unclass 100.0 3E-37 6.4E-42 313.8 13.0 210 163-414 15-228 (243)
195 cd03263 ABC_subfamily_A The AB 100.0 4.7E-36 1E-40 330.7 23.7 203 165-412 15-219 (220)
196 cd03224 ABC_TM1139_LivF_branch 100.0 5.4E-36 1.2E-40 330.7 24.1 202 166-413 14-220 (222)
197 PRK13650 cbiO cobalt transport 100.0 8.7E-36 1.9E-40 339.6 26.3 215 166-424 21-242 (279)
198 TIGR03375 type_I_sec_LssB type 100.0 1.6E-36 3.6E-41 388.4 22.7 258 78-414 428-688 (694)
199 PRK11247 ssuB aliphatic sulfon 100.0 4.6E-36 9.9E-41 336.9 23.5 206 855-1093 12-218 (257)
200 COG4987 CydC ABC-type transpor 100.0 6.3E-37 1.4E-41 352.9 16.7 257 77-414 302-561 (573)
201 PRK13647 cbiO cobalt transport 100.0 1E-35 2.3E-40 338.1 26.6 203 166-412 19-225 (274)
202 TIGR03740 galliderm_ABC gallid 100.0 8.3E-36 1.8E-40 329.3 24.9 208 857-1094 2-209 (223)
203 cd03225 ABC_cobalt_CbiO_domain 100.0 3.2E-36 7E-41 329.8 21.5 193 881-1084 14-210 (211)
204 PRK13646 cbiO cobalt transport 100.0 4.5E-36 9.7E-41 343.2 23.5 217 856-1093 3-230 (286)
205 cd03269 ABC_putative_ATPase Th 100.0 6.1E-36 1.3E-40 327.3 23.6 197 166-407 14-210 (210)
206 cd03256 ABC_PhnC_transporter A 100.0 7.1E-36 1.5E-40 334.0 24.6 213 166-413 15-233 (241)
207 cd03295 ABC_OpuCA_Osmoprotecti 100.0 9E-36 2E-40 333.1 25.4 205 166-413 15-224 (242)
208 PRK11831 putative ABC transpor 100.0 1.2E-35 2.7E-40 336.9 26.8 206 166-413 21-232 (269)
209 PRK13631 cbiO cobalt transport 100.0 9.3E-36 2E-40 344.2 26.0 218 165-426 39-280 (320)
210 PRK11614 livF leucine/isoleuci 100.0 4.6E-36 1E-40 334.5 22.6 212 855-1093 5-221 (237)
211 PRK13650 cbiO cobalt transport 100.0 4.6E-36 1E-40 341.8 23.0 216 855-1093 4-224 (279)
212 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.1E-35 2.3E-40 331.3 25.4 212 856-1093 2-216 (236)
213 PRK11160 cysteine/glutathione 100.0 2.8E-36 6E-41 377.3 23.1 256 78-414 304-562 (574)
214 TIGR03005 ectoine_ehuA ectoine 100.0 8.5E-36 1.8E-40 335.4 24.7 214 856-1093 1-231 (252)
215 PRK09536 btuD corrinoid ABC tr 100.0 8.2E-36 1.8E-40 351.8 25.7 208 166-413 17-227 (402)
216 PRK13651 cobalt transporter AT 100.0 8.6E-36 1.9E-40 342.5 25.2 205 165-413 20-253 (305)
217 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.3E-36 1.1E-40 329.8 22.5 195 165-403 17-218 (218)
218 TIGR02211 LolD_lipo_ex lipopro 100.0 7.5E-36 1.6E-40 329.3 23.7 211 856-1088 2-220 (221)
219 PRK11300 livG leucine/isoleuci 100.0 7.3E-36 1.6E-40 336.7 24.1 218 855-1094 5-239 (255)
220 PRK11629 lolD lipoprotein tran 100.0 1.5E-35 3.3E-40 329.4 26.2 201 165-409 22-229 (233)
221 PRK14247 phosphate ABC transpo 100.0 1.4E-35 3.1E-40 333.2 26.2 216 856-1093 4-229 (250)
222 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.2E-36 2E-40 337.8 24.8 208 163-413 35-249 (269)
223 PRK11124 artP arginine transpo 100.0 1E-35 2.2E-40 332.8 24.8 213 856-1093 3-225 (242)
224 COG0410 LivF ABC-type branched 100.0 3.8E-36 8.3E-41 315.9 19.8 213 856-1094 4-222 (237)
225 TIGR01978 sufC FeS assembly AT 100.0 1.3E-35 2.7E-40 332.4 25.4 219 856-1093 1-229 (243)
226 PRK11176 lipid transporter ATP 100.0 3.1E-36 6.7E-41 379.2 22.9 257 78-414 308-567 (582)
227 PRK15079 oligopeptide ABC tran 100.0 1.1E-35 2.5E-40 344.7 25.7 229 855-1093 8-246 (331)
228 PRK10790 putative multidrug tr 100.0 7.4E-36 1.6E-40 376.1 26.1 253 78-414 308-563 (592)
229 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.9E-35 4.1E-40 329.3 26.4 205 166-414 15-221 (236)
230 PRK13641 cbiO cobalt transport 100.0 8E-36 1.7E-40 341.3 24.0 218 856-1093 3-229 (287)
231 PRK14273 phosphate ABC transpo 100.0 1.4E-35 3.1E-40 334.0 25.5 215 855-1093 7-233 (254)
232 PRK13646 cbiO cobalt transport 100.0 1.3E-35 2.8E-40 339.4 25.4 207 165-414 20-235 (286)
233 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.6E-36 5.7E-41 387.7 22.1 261 78-414 436-700 (710)
234 PRK13548 hmuV hemin importer A 100.0 1.1E-35 2.3E-40 335.4 24.3 213 856-1093 3-225 (258)
235 TIGR02315 ABC_phnC phosphonate 100.0 7.6E-36 1.7E-40 334.1 23.0 212 166-412 16-233 (243)
236 PTZ00265 multidrug resistance 100.0 1.7E-36 3.6E-41 407.8 21.1 263 78-414 1126-1452(1466)
237 TIGR01193 bacteriocin_ABC ABC- 100.0 2.5E-36 5.5E-41 387.5 21.8 257 78-414 438-697 (708)
238 PRK13644 cbiO cobalt transport 100.0 7.2E-36 1.6E-40 339.4 23.0 213 856-1093 2-219 (274)
239 PRK14267 phosphate ABC transpo 100.0 1.6E-35 3.5E-40 333.4 25.7 217 855-1093 4-232 (253)
240 PRK15079 oligopeptide ABC tran 100.0 1.7E-35 3.7E-40 343.2 26.4 208 165-413 34-250 (331)
241 cd03268 ABC_BcrA_bacitracin_re 100.0 1E-35 2.2E-40 325.0 23.2 194 166-407 14-208 (208)
242 PRK13652 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 338.3 24.5 214 856-1093 4-222 (277)
243 cd03266 ABC_NatA_sodium_export 100.0 1.2E-35 2.6E-40 327.0 23.6 198 166-407 19-218 (218)
244 PRK14268 phosphate ABC transpo 100.0 1.8E-35 4E-40 333.7 25.6 214 855-1093 12-237 (258)
245 PRK13635 cbiO cobalt transport 100.0 1.9E-35 4E-40 336.7 25.6 215 166-424 21-242 (279)
246 PRK09493 glnQ glutamine ABC tr 100.0 2.1E-35 4.6E-40 329.8 25.6 204 166-413 15-224 (240)
247 TIGR00958 3a01208 Conjugate Tr 100.0 3.4E-36 7.4E-41 384.8 21.7 256 78-414 444-702 (711)
248 PRK09473 oppD oligopeptide tra 100.0 2.3E-35 5.1E-40 342.3 26.7 214 165-414 29-251 (330)
249 TIGR03411 urea_trans_UrtD urea 100.0 1.6E-35 3.6E-40 331.2 24.5 215 856-1093 3-226 (242)
250 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-35 3.2E-40 321.8 23.3 195 118-407 3-202 (202)
251 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.1E-35 2.3E-40 325.7 22.2 194 886-1091 16-211 (211)
252 PRK11264 putative amino-acid A 100.0 2.2E-35 4.8E-40 331.8 25.4 204 166-413 17-232 (250)
253 COG4559 ABC-type hemin transpo 100.0 5.1E-36 1.1E-40 307.4 18.2 216 856-1094 2-226 (259)
254 COG4618 ArpD ABC-type protease 100.0 3.8E-36 8.3E-41 342.8 19.1 256 80-416 304-562 (580)
255 PRK10070 glycine betaine trans 100.0 1.6E-35 3.5E-40 349.1 25.0 206 165-413 41-253 (400)
256 PRK11231 fecE iron-dicitrate t 100.0 1.4E-35 3.1E-40 334.0 23.6 216 856-1094 3-223 (255)
257 cd03234 ABCG_White The White s 100.0 1.8E-35 4E-40 327.2 23.9 203 165-407 20-226 (226)
258 PRK13635 cbiO cobalt transport 100.0 1.3E-35 2.8E-40 338.0 23.2 215 855-1093 5-224 (279)
259 PRK14245 phosphate ABC transpo 100.0 2.9E-35 6.4E-40 330.6 25.7 219 855-1093 3-229 (250)
260 cd03264 ABC_drug_resistance_li 100.0 1.6E-35 3.5E-40 324.3 22.9 196 166-407 14-211 (211)
261 PRK13638 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 336.8 23.4 213 856-1093 2-220 (271)
262 COG4525 TauB ABC-type taurine 100.0 8.3E-36 1.8E-40 301.3 18.8 200 881-1093 18-219 (259)
263 COG0411 LivG ABC-type branched 100.0 5.7E-36 1.2E-40 316.9 18.5 207 879-1094 15-235 (250)
264 PRK13636 cbiO cobalt transport 100.0 2.7E-35 5.9E-40 336.2 25.6 206 166-414 20-231 (283)
265 PRK10253 iron-enterobactin tra 100.0 1.8E-35 3.8E-40 335.1 23.8 218 855-1094 7-229 (265)
266 cd03226 ABC_cobalt_CbiO_domain 100.0 1.1E-35 2.3E-40 324.1 21.3 191 166-404 14-205 (205)
267 PRK10575 iron-hydroxamate tran 100.0 2E-35 4.3E-40 334.6 24.2 217 855-1093 11-232 (265)
268 PRK14242 phosphate transporter 100.0 3.1E-35 6.8E-40 331.1 25.4 220 854-1093 5-232 (253)
269 PRK14241 phosphate transporter 100.0 3.3E-35 7.1E-40 331.7 25.6 217 855-1093 4-237 (258)
270 TIGR02769 nickel_nikE nickel i 100.0 2.8E-35 6.1E-40 333.4 25.0 223 856-1093 3-235 (265)
271 PRK10744 pstB phosphate transp 100.0 3.4E-35 7.4E-40 331.9 25.4 218 852-1093 10-239 (260)
272 PRK10070 glycine betaine trans 100.0 1.7E-35 3.7E-40 348.9 23.6 201 881-1093 41-249 (400)
273 PRK13639 cbiO cobalt transport 100.0 2.6E-35 5.7E-40 335.2 24.3 214 856-1093 2-221 (275)
274 TIGR03415 ABC_choXWV_ATP choli 100.0 2.4E-35 5.2E-40 345.2 24.6 208 163-413 35-253 (382)
275 PRK11247 ssuB aliphatic sulfon 100.0 2.7E-35 5.8E-40 330.7 24.1 194 166-410 26-219 (257)
276 PRK09984 phosphonate/organopho 100.0 2.5E-35 5.5E-40 333.4 24.0 220 855-1094 4-238 (262)
277 TIGR03873 F420-0_ABC_ATP propo 100.0 2.2E-35 4.8E-40 332.7 23.4 216 856-1093 2-221 (256)
278 PRK11248 tauB taurine transpor 100.0 4.5E-35 9.7E-40 329.4 25.7 200 166-410 15-216 (255)
279 cd03233 ABC_PDR_domain1 The pl 100.0 3E-35 6.4E-40 319.5 23.4 196 855-1091 3-202 (202)
280 PRK10584 putative ABC transpor 100.0 4.3E-35 9.4E-40 324.8 25.2 213 855-1089 6-226 (228)
281 PRK13649 cbiO cobalt transport 100.0 2.8E-35 6E-40 336.3 24.3 217 856-1093 3-229 (280)
282 PRK14237 phosphate transporter 100.0 5.5E-35 1.2E-39 331.2 26.5 225 849-1093 14-246 (267)
283 cd03257 ABC_NikE_OppD_transpor 100.0 4.2E-35 9.2E-40 324.9 24.9 201 166-407 19-228 (228)
284 COG4175 ProV ABC-type proline/ 100.0 6.4E-36 1.4E-40 323.0 17.7 222 164-436 40-268 (386)
285 cd03300 ABC_PotA_N PotA is an 100.0 4.2E-35 9.2E-40 325.5 24.8 212 857-1093 2-215 (232)
286 TIGR03410 urea_trans_UrtE urea 100.0 3.3E-35 7.1E-40 326.2 23.9 201 166-412 14-219 (230)
287 PRK11022 dppD dipeptide transp 100.0 4.4E-35 9.6E-40 339.7 25.8 214 165-414 20-243 (326)
288 TIGR03410 urea_trans_UrtE urea 100.0 2.6E-35 5.5E-40 327.1 22.7 211 856-1094 1-217 (230)
289 cd03232 ABC_PDR_domain2 The pl 100.0 2.9E-35 6.3E-40 317.0 22.5 190 855-1091 3-192 (192)
290 PRK14235 phosphate transporter 100.0 5.2E-35 1.1E-39 331.4 25.4 220 855-1093 19-246 (267)
291 PRK10895 lipopolysaccharide AB 100.0 4.2E-35 9.1E-40 327.6 24.3 205 166-413 17-225 (241)
292 TIGR03005 ectoine_ehuA ectoine 100.0 4.9E-35 1.1E-39 329.2 24.9 205 166-413 14-235 (252)
293 cd03292 ABC_FtsE_transporter F 100.0 3.3E-35 7.2E-40 322.5 22.8 194 166-403 15-214 (214)
294 PRK11308 dppF dipeptide transp 100.0 6.8E-35 1.5E-39 338.0 26.7 208 165-414 28-244 (327)
295 TIGR01184 ntrCD nitrate transp 100.0 2E-35 4.4E-40 327.4 21.3 198 884-1093 1-199 (230)
296 PRK11308 dppF dipeptide transp 100.0 6.1E-35 1.3E-39 338.4 26.2 225 855-1093 5-239 (327)
297 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.8E-34 1.2E-38 364.5 37.8 209 854-1093 450-668 (686)
298 TIGR02211 LolD_lipo_ex lipopro 100.0 4.5E-35 9.7E-40 323.1 23.8 196 165-404 18-220 (221)
299 COG0444 DppD ABC-type dipeptid 100.0 6.3E-35 1.4E-39 322.4 24.8 215 164-413 17-242 (316)
300 TIGR00972 3a0107s01c2 phosphat 100.0 8.3E-35 1.8E-39 326.4 26.3 206 166-413 15-231 (247)
301 PRK11614 livF leucine/isoleuci 100.0 4.4E-35 9.6E-40 326.6 23.9 202 166-413 19-225 (237)
302 cd03267 ABC_NatA_like Similar 100.0 4.9E-35 1.1E-39 325.7 24.2 233 119-407 1-236 (236)
303 PRK13632 cbiO cobalt transport 100.0 4.8E-35 1E-39 332.4 24.6 204 166-413 23-230 (271)
304 PRK13641 cbiO cobalt transport 100.0 4.8E-35 1E-39 334.8 24.8 205 165-413 20-233 (287)
305 PRK13632 cbiO cobalt transport 100.0 4.1E-35 8.8E-40 333.0 23.9 215 855-1093 7-226 (271)
306 TIGR03415 ABC_choXWV_ATP choli 100.0 3.3E-35 7.3E-40 343.9 23.8 203 879-1093 35-249 (382)
307 PRK14256 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 326.4 27.2 220 855-1093 4-231 (252)
308 KOG0057 Mitochondrial Fe/S clu 100.0 1E-35 2.2E-40 343.0 18.9 212 852-1093 348-569 (591)
309 TIGR02673 FtsE cell division A 100.0 4.9E-35 1.1E-39 321.2 23.4 193 166-402 16-214 (214)
310 PRK13548 hmuV hemin importer A 100.0 7.3E-35 1.6E-39 328.5 25.4 205 166-413 16-229 (258)
311 PRK13547 hmuV hemin importer A 100.0 4.2E-35 9.1E-40 331.9 23.5 219 856-1094 2-240 (272)
312 PRK13633 cobalt transporter AT 100.0 6.7E-35 1.5E-39 332.7 25.3 206 165-414 23-233 (280)
313 PRK13648 cbiO cobalt transport 100.0 5.9E-35 1.3E-39 331.5 24.5 216 855-1094 7-227 (269)
314 PRK14269 phosphate ABC transpo 100.0 6.2E-35 1.3E-39 327.1 24.3 219 856-1093 3-225 (246)
315 PRK11022 dppD dipeptide transp 100.0 9.9E-35 2.1E-39 336.8 26.8 220 856-1093 4-238 (326)
316 PRK13549 xylose transporter AT 100.0 3.4E-35 7.5E-40 362.6 24.4 221 855-1095 5-229 (506)
317 PRK14273 phosphate ABC transpo 100.0 9.4E-35 2E-39 327.4 25.8 206 166-413 21-237 (254)
318 TIGR00968 3a0106s01 sulfate AB 100.0 6.7E-35 1.5E-39 324.9 24.2 212 857-1093 2-215 (237)
319 TIGR01277 thiQ thiamine ABC tr 100.0 4.4E-35 9.5E-40 321.2 22.4 198 883-1092 13-212 (213)
320 PRK13652 cbiO cobalt transport 100.0 8.7E-35 1.9E-39 331.2 25.6 205 166-413 18-226 (277)
321 PRK14250 phosphate ABC transpo 100.0 4.3E-35 9.4E-40 327.3 22.6 209 855-1093 3-216 (241)
322 PRK13633 cobalt transporter AT 100.0 4.8E-35 1E-39 333.9 23.3 219 855-1093 4-228 (280)
323 PRK13648 cbiO cobalt transport 100.0 1.2E-34 2.6E-39 329.0 26.4 215 166-424 23-244 (269)
324 cd03267 ABC_NatA_like Similar 100.0 6.1E-35 1.3E-39 324.9 23.4 200 880-1091 33-236 (236)
325 PRK14259 phosphate ABC transpo 100.0 7.3E-35 1.6E-39 330.4 24.4 215 854-1093 12-248 (269)
326 TIGR03411 urea_trans_UrtD urea 100.0 1E-34 2.2E-39 324.8 25.3 211 166-413 16-230 (242)
327 PRK11300 livG leucine/isoleuci 100.0 1.1E-34 2.3E-39 327.2 25.6 220 166-413 19-242 (255)
328 PRK09473 oppD oligopeptide tra 100.0 1E-34 2.2E-39 337.0 26.0 224 855-1093 12-246 (330)
329 PRK13649 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 330.2 27.1 204 166-413 21-233 (280)
330 PRK13645 cbiO cobalt transport 100.0 5.1E-35 1.1E-39 335.3 23.3 219 855-1093 6-235 (289)
331 TIGR03608 L_ocin_972_ABC putat 100.0 4.7E-35 1E-39 319.4 21.9 189 881-1081 11-206 (206)
332 PRK13644 cbiO cobalt transport 100.0 7.7E-35 1.7E-39 330.9 24.5 203 166-413 16-223 (274)
333 PRK14250 phosphate ABC transpo 100.0 9.3E-35 2E-39 324.6 24.7 200 166-413 17-220 (241)
334 PRK13640 cbiO cobalt transport 100.0 5.6E-35 1.2E-39 333.5 23.3 217 855-1093 5-227 (282)
335 PRK10619 histidine/lysine/argi 100.0 1.1E-34 2.5E-39 327.1 25.5 204 166-413 19-240 (257)
336 PRK10584 putative ABC transpor 100.0 1.3E-34 2.8E-39 321.0 25.5 197 166-406 24-227 (228)
337 COG4988 CydD ABC-type transpor 100.0 2E-35 4.4E-40 346.8 19.9 213 852-1093 317-538 (559)
338 PRK14268 phosphate ABC transpo 100.0 1.6E-34 3.4E-39 326.1 26.5 209 166-413 26-241 (258)
339 TIGR02769 nickel_nikE nickel i 100.0 1.2E-34 2.6E-39 328.2 25.5 206 165-413 24-239 (265)
340 COG4525 TauB ABC-type taurine 100.0 6.1E-35 1.3E-39 295.1 20.3 205 165-414 18-224 (259)
341 TIGR01842 type_I_sec_PrtD type 100.0 4.7E-35 1E-39 364.8 23.9 256 78-414 284-542 (544)
342 PRK10908 cell division protein 100.0 1.2E-34 2.6E-39 319.9 24.3 195 166-404 16-216 (222)
343 PRK13638 cbiO cobalt transport 100.0 1.7E-34 3.6E-39 328.2 26.2 204 166-413 15-224 (271)
344 PRK14239 phosphate transporter 100.0 1.3E-34 2.9E-39 325.8 25.2 215 855-1093 5-231 (252)
345 PRK14242 phosphate transporter 100.0 1.5E-34 3.3E-39 325.6 25.6 207 166-413 20-236 (253)
346 PRK13639 cbiO cobalt transport 100.0 1.9E-34 4.1E-39 328.1 26.6 204 166-413 16-225 (275)
347 PRK15093 antimicrobial peptide 100.0 1.3E-34 2.9E-39 336.8 25.9 222 856-1093 4-243 (330)
348 PRK11124 artP arginine transpo 100.0 1.1E-34 2.5E-39 324.4 24.4 203 166-412 16-228 (242)
349 cd03300 ABC_PotA_N PotA is an 100.0 1.9E-34 4.1E-39 320.3 26.0 205 166-413 14-219 (232)
350 PRK10771 thiQ thiamine transpo 100.0 7E-35 1.5E-39 323.9 22.5 211 856-1093 2-214 (232)
351 PRK14257 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 335.1 26.1 210 166-413 96-312 (329)
352 PRK14270 phosphate ABC transpo 100.0 1.4E-34 3E-39 325.4 25.1 215 855-1093 4-230 (251)
353 cd03299 ABC_ModC_like Archeal 100.0 1.2E-34 2.6E-39 322.5 24.2 199 883-1093 14-214 (235)
354 PRK14274 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 326.6 25.2 219 855-1093 12-238 (259)
355 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-33 3.3E-38 361.8 38.0 211 854-1093 472-692 (708)
356 PRK13640 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 329.9 25.6 208 166-414 21-232 (282)
357 PRK14240 phosphate transporter 100.0 1.6E-34 3.4E-39 324.8 25.2 215 855-1093 3-229 (250)
358 cd03213 ABCG_EPDR ABCG transpo 100.0 1.2E-34 2.6E-39 312.7 23.2 190 855-1091 3-194 (194)
359 PRK14247 phosphate ABC transpo 100.0 2.1E-34 4.5E-39 323.9 26.0 212 166-413 17-233 (250)
360 TIGR02142 modC_ABC molybdenum 100.0 8.8E-35 1.9E-39 341.6 24.0 194 886-1093 15-216 (354)
361 PRK14244 phosphate ABC transpo 100.0 1.4E-34 3E-39 325.4 24.6 219 856-1093 6-232 (251)
362 PRK15112 antimicrobial peptide 100.0 9.2E-35 2E-39 329.4 23.2 223 856-1093 5-234 (267)
363 PRK14262 phosphate ABC transpo 100.0 1.7E-34 3.7E-39 324.5 25.1 218 856-1093 4-229 (250)
364 TIGR01978 sufC FeS assembly AT 100.0 1.8E-34 3.8E-39 323.1 25.1 212 166-413 14-233 (243)
365 PRK11144 modC molybdate transp 100.0 9.7E-35 2.1E-39 340.7 23.9 190 886-1093 16-213 (352)
366 COG4181 Predicted ABC-type tra 100.0 3.2E-35 6.8E-40 291.2 16.6 197 879-1088 21-225 (228)
367 cd03297 ABC_ModC_molybdenum_tr 100.0 1.2E-34 2.6E-39 318.1 23.0 191 886-1091 16-214 (214)
368 TIGR03740 galliderm_ABC gallid 100.0 1.8E-34 3.9E-39 318.7 24.5 196 166-410 14-209 (223)
369 PRK15093 antimicrobial peptide 100.0 2E-34 4.4E-39 335.3 26.1 217 165-413 20-247 (330)
370 PRK14253 phosphate ABC transpo 100.0 1.9E-34 4.2E-39 323.9 25.1 219 855-1093 3-228 (249)
371 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-34 2.9E-39 316.9 23.2 195 170-407 16-211 (211)
372 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.6E-33 5.6E-38 360.1 39.0 210 854-1093 476-695 (710)
373 PRK13645 cbiO cobalt transport 100.0 1.6E-34 3.5E-39 331.2 24.8 205 166-413 25-239 (289)
374 PRK14258 phosphate ABC transpo 100.0 2.1E-34 4.5E-39 325.5 25.3 221 855-1093 7-240 (261)
375 PRK14236 phosphate transporter 100.0 2.5E-34 5.5E-39 326.7 26.0 221 853-1093 23-251 (272)
376 PRK10771 thiQ thiamine transpo 100.0 2E-34 4.3E-39 320.3 24.5 201 170-413 17-218 (232)
377 PRK14267 phosphate ABC transpo 100.0 2.5E-34 5.4E-39 323.8 25.6 212 166-413 18-236 (253)
378 PRK14260 phosphate ABC transpo 100.0 2E-34 4.3E-39 325.4 25.0 216 855-1093 7-238 (259)
379 PRK10253 iron-enterobactin tra 100.0 1.8E-34 3.9E-39 326.8 24.6 208 166-413 21-232 (265)
380 COG5265 ATM1 ABC-type transpor 100.0 1.1E-35 2.3E-40 332.1 14.2 237 103-414 246-486 (497)
381 PRK10575 iron-hydroxamate tran 100.0 1.8E-34 4E-39 326.7 24.5 209 166-413 25-236 (265)
382 cd03299 ABC_ModC_like Archeal 100.0 2.9E-34 6.2E-39 319.4 25.5 204 167-413 14-218 (235)
383 TIGR00968 3a0106s01 sulfate AB 100.0 3E-34 6.6E-39 319.6 25.6 205 166-413 14-219 (237)
384 PRK10762 D-ribose transporter 100.0 1.2E-34 2.7E-39 357.3 24.6 218 856-1095 5-227 (501)
385 TIGR02982 heterocyst_DevA ABC 100.0 1.8E-34 3.9E-39 318.0 23.2 211 856-1087 2-219 (220)
386 PRK10789 putative multidrug tr 100.0 7.7E-35 1.7E-39 364.2 23.0 256 78-414 280-538 (569)
387 PRK14257 phosphate ABC transpo 100.0 2.7E-34 6E-39 332.9 25.9 221 854-1093 79-308 (329)
388 PRK13642 cbiO cobalt transport 100.0 1.8E-34 3.8E-39 328.7 23.9 216 855-1093 4-224 (277)
389 cd03225 ABC_cobalt_CbiO_domain 100.0 1.3E-34 2.8E-39 317.1 22.0 194 165-402 14-211 (211)
390 TIGR01846 type_I_sec_HlyB type 100.0 6.6E-35 1.4E-39 373.3 22.8 257 78-414 421-680 (694)
391 PRK11144 modC molybdate transp 100.0 1.2E-34 2.7E-39 339.8 23.0 195 170-413 16-217 (352)
392 PRK14272 phosphate ABC transpo 100.0 3.7E-34 8.1E-39 322.2 26.0 216 855-1093 4-231 (252)
393 PRK10418 nikD nickel transport 100.0 2.2E-34 4.8E-39 324.1 24.1 213 855-1093 4-225 (254)
394 PRK09984 phosphonate/organopho 100.0 2.4E-34 5.3E-39 325.4 24.3 215 166-412 18-240 (262)
395 PRK11231 fecE iron-dicitrate t 100.0 2.2E-34 4.8E-39 324.4 23.9 208 166-413 16-226 (255)
396 TIGR01277 thiQ thiamine ABC tr 100.0 2.7E-34 5.8E-39 315.0 23.8 199 167-408 13-212 (213)
397 PRK11701 phnK phosphonate C-P 100.0 2.6E-34 5.7E-39 324.4 24.3 215 855-1093 6-236 (258)
398 PRK14235 phosphate transporter 100.0 4.7E-34 1E-38 323.6 26.5 208 166-413 33-250 (267)
399 TIGR02770 nickel_nikD nickel i 100.0 1.4E-34 3E-39 321.1 21.6 201 883-1093 1-210 (230)
400 PRK10744 pstB phosphate transp 100.0 3.9E-34 8.3E-39 323.3 25.7 229 113-413 8-243 (260)
401 PRK09700 D-allose transporter 100.0 1.5E-34 3.2E-39 357.6 24.1 218 855-1094 5-230 (510)
402 cd03262 ABC_HisP_GlnQ_permease 100.0 1.6E-34 3.5E-39 316.9 21.6 194 166-403 14-213 (213)
403 PRK14249 phosphate ABC transpo 100.0 3.8E-34 8.2E-39 321.9 25.1 219 855-1093 4-230 (251)
404 TIGR03873 F420-0_ABC_ATP propo 100.0 3.1E-34 6.7E-39 323.4 24.4 207 166-412 15-224 (256)
405 TIGR02203 MsbA_lipidA lipid A 100.0 8.8E-35 1.9E-39 365.5 22.2 257 78-414 297-556 (571)
406 TIGR02770 nickel_nikD nickel i 100.0 2.2E-34 4.7E-39 319.4 22.8 207 167-413 1-214 (230)
407 PRK13657 cyclic beta-1,2-gluca 100.0 1.5E-34 3.2E-39 363.9 24.1 223 117-414 333-558 (588)
408 PRK14237 phosphate transporter 100.0 6.4E-34 1.4E-38 322.5 26.8 230 112-413 14-250 (267)
409 PRK13642 cbiO cobalt transport 100.0 5.6E-34 1.2E-38 324.6 26.3 204 166-413 21-228 (277)
410 TIGR01184 ntrCD nitrate transp 100.0 2E-34 4.3E-39 319.5 22.0 202 168-412 1-202 (230)
411 PRK14263 phosphate ABC transpo 100.0 4.7E-34 1E-38 322.2 25.4 219 854-1093 7-240 (261)
412 PRK15112 antimicrobial peptide 100.0 4.2E-34 9.1E-39 324.0 25.1 207 165-413 26-238 (267)
413 cd03235 ABC_Metallic_Cations A 100.0 1.5E-34 3.3E-39 317.0 20.6 199 166-407 13-213 (213)
414 PRK14269 phosphate ABC transpo 100.0 5E-34 1.1E-38 319.8 25.2 208 166-413 16-229 (246)
415 PRK14261 phosphate ABC transpo 100.0 4.6E-34 1E-38 321.5 25.0 219 855-1093 6-232 (253)
416 TIGR02142 modC_ABC molybdenum 100.0 2.7E-34 5.8E-39 337.5 24.0 199 170-413 15-220 (354)
417 PRK14245 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 320.1 25.7 209 166-413 17-233 (250)
418 PRK14248 phosphate ABC transpo 100.0 4.4E-34 9.5E-39 324.3 24.9 215 855-1093 21-247 (268)
419 PRK13543 cytochrome c biogenes 100.0 3.3E-34 7.2E-39 314.3 23.1 201 855-1082 11-211 (214)
420 PRK14275 phosphate ABC transpo 100.0 4.4E-34 9.5E-39 326.6 25.0 215 855-1093 39-265 (286)
421 PRK14271 phosphate ABC transpo 100.0 5.3E-34 1.2E-38 324.2 25.5 219 855-1093 21-246 (276)
422 PRK00349 uvrA excinuclease ABC 100.0 5.3E-33 1.1E-37 354.4 37.5 122 956-1093 792-922 (943)
423 PRK11174 cysteine/glutathione 100.0 6.3E-35 1.4E-39 367.6 19.7 210 854-1093 348-567 (588)
424 PRK13538 cytochrome c biogenes 100.0 2.4E-34 5.3E-39 313.1 21.7 199 856-1081 2-202 (204)
425 COG0444 DppD ABC-type dipeptid 100.0 4.4E-34 9.6E-39 315.7 23.9 223 856-1093 2-238 (316)
426 PLN03130 ABC transporter C fam 100.0 1.3E-34 2.9E-39 393.0 24.2 257 78-414 1199-1461(1622)
427 PRK14241 phosphate transporter 100.0 6.2E-34 1.3E-38 321.3 25.7 211 166-413 18-241 (258)
428 PRK15056 manganese/iron transp 100.0 3.1E-34 6.7E-39 326.0 23.3 218 855-1094 6-226 (272)
429 PRK00635 excinuclease ABC subu 100.0 1.2E-32 2.7E-37 363.0 41.7 135 952-1094 759-902 (1809)
430 TIGR01846 type_I_sec_HlyB type 100.0 4.4E-33 9.6E-38 356.5 36.6 213 853-1093 453-675 (694)
431 PRK14251 phosphate ABC transpo 100.0 5.3E-34 1.2E-38 320.7 24.8 215 855-1093 4-230 (251)
432 TIGR01192 chvA glucan exporter 100.0 2.2E-34 4.7E-39 360.8 23.9 257 78-414 299-558 (585)
433 TIGR03375 type_I_sec_LssB type 100.0 4E-33 8.7E-38 357.2 36.2 212 854-1093 462-683 (694)
434 COG4175 ProV ABC-type proline/ 100.0 6.3E-35 1.4E-39 315.4 16.4 201 881-1093 41-249 (386)
435 PRK14270 phosphate ABC transpo 100.0 8.6E-34 1.9E-38 318.9 26.4 210 166-413 18-234 (251)
436 PRK14255 phosphate ABC transpo 100.0 8.1E-34 1.8E-38 319.4 26.1 219 855-1093 5-231 (252)
437 cd03231 ABC_CcmA_heme_exporter 100.0 2.2E-34 4.7E-39 312.6 20.7 195 857-1081 2-198 (201)
438 PRK14256 phosphate ABC transpo 100.0 9E-34 1.9E-38 319.0 26.2 211 166-413 18-235 (252)
439 PRK11701 phnK phosphonate C-P 100.0 8.2E-34 1.8E-38 320.4 25.9 206 166-413 20-240 (258)
440 PRK14239 phosphate transporter 100.0 1E-33 2.2E-38 318.7 26.5 210 166-413 19-235 (252)
441 PRK14265 phosphate ABC transpo 100.0 7.9E-34 1.7E-38 322.7 25.8 216 853-1093 18-253 (274)
442 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5E-34 1.1E-38 314.9 23.4 192 879-1091 33-224 (224)
443 PRK10419 nikE nickel transport 100.0 6E-34 1.3E-38 322.7 24.5 224 856-1094 4-237 (268)
444 TIGR02633 xylG D-xylose ABC tr 100.0 3.9E-34 8.6E-39 353.1 25.0 220 856-1095 2-227 (500)
445 PRK15439 autoinducer 2 ABC tra 100.0 3.2E-34 6.9E-39 353.8 23.9 211 855-1094 11-225 (510)
446 PRK10418 nikD nickel transport 100.0 1.2E-33 2.6E-38 318.2 26.4 205 167-413 18-229 (254)
447 KOG0066 eIF2-interacting prote 100.0 1.7E-33 3.6E-38 311.5 26.7 202 852-1093 583-786 (807)
448 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-34 2.6E-39 323.2 17.9 209 857-1093 2-220 (237)
449 PRK14274 phosphate ABC transpo 100.0 1.1E-33 2.3E-38 319.6 25.9 210 166-413 26-242 (259)
450 PRK14262 phosphate ABC transpo 100.0 9.7E-34 2.1E-38 318.4 25.3 210 166-413 17-233 (250)
451 PRK14254 phosphate ABC transpo 100.0 8.8E-34 1.9E-38 323.7 25.2 213 855-1093 39-264 (285)
452 PRK11288 araG L-arabinose tran 100.0 4.4E-34 9.6E-39 352.3 24.4 217 855-1093 4-224 (501)
453 PRK14240 phosphate transporter 100.0 1.2E-33 2.5E-38 317.8 25.6 210 166-413 17-233 (250)
454 PLN03232 ABC transporter C fam 100.0 1.8E-34 3.8E-39 392.1 22.7 259 78-414 1196-1458(1495)
455 CHL00131 ycf16 sulfate ABC tra 100.0 1.3E-33 2.8E-38 317.8 25.7 220 855-1093 7-236 (252)
456 PRK14259 phosphate ABC transpo 100.0 9E-34 2E-38 321.5 24.5 206 166-414 27-253 (269)
457 PRK10247 putative ABC transpor 100.0 4.4E-34 9.5E-39 315.8 21.4 209 855-1091 7-220 (225)
458 PRK14238 phosphate transporter 100.0 8.5E-34 1.9E-38 322.0 24.0 215 855-1093 24-250 (271)
459 PRK14243 phosphate transporter 100.0 9.1E-34 2E-38 320.7 24.1 218 855-1093 10-243 (264)
460 TIGR02323 CP_lyasePhnK phospho 100.0 1.1E-33 2.3E-38 318.6 24.3 215 855-1093 3-233 (253)
461 PRK10982 galactose/methyl gala 100.0 5.3E-34 1.1E-38 351.0 23.8 206 881-1095 11-220 (491)
462 PRK14248 phosphate ABC transpo 100.0 2.3E-33 5.1E-38 318.3 27.2 207 166-413 35-251 (268)
463 TIGR02204 MsbA_rel ABC transpo 100.0 3E-34 6.6E-39 360.9 21.6 259 78-414 301-563 (576)
464 cd03252 ABCC_Hemolysin The ABC 100.0 7.2E-34 1.6E-38 316.9 22.1 205 166-414 16-225 (237)
465 cd03213 ABCG_EPDR ABCG transpo 100.0 1.3E-33 2.9E-38 304.6 23.4 170 165-407 22-194 (194)
466 COG4604 CeuD ABC-type enteroch 100.0 3.8E-35 8.2E-40 297.3 10.5 206 879-1094 12-221 (252)
467 cd03230 ABC_DR_subfamily_A Thi 100.0 6.8E-34 1.5E-38 301.3 20.5 168 857-1084 2-171 (173)
468 TIGR01166 cbiO cobalt transpor 100.0 4.6E-34 1E-38 307.4 19.5 178 881-1068 5-188 (190)
469 PRK13547 hmuV hemin importer A 100.0 1.5E-33 3.2E-38 319.3 24.6 212 166-413 15-243 (272)
470 PRK14266 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 317.0 24.1 219 855-1093 3-229 (250)
471 PRK14272 phosphate ABC transpo 100.0 2.6E-33 5.7E-38 315.4 26.1 207 166-413 18-235 (252)
472 PRK03695 vitamin B12-transport 100.0 9.8E-34 2.1E-38 317.5 22.5 197 883-1093 11-217 (248)
473 COG1132 MdlB ABC-type multidru 100.0 1.7E-34 3.8E-39 361.7 18.1 212 853-1093 326-547 (567)
474 COG1245 Predicted ATPase, RNas 100.0 8.7E-33 1.9E-37 310.2 29.7 173 884-1082 357-530 (591)
475 PRK11176 lipid transporter ATP 100.0 3.3E-34 7E-39 360.9 20.4 213 854-1093 340-562 (582)
476 PRK14236 phosphate transporter 100.0 3E-33 6.6E-38 317.9 26.4 210 166-413 39-255 (272)
477 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.9E-34 1.1E-38 322.6 19.7 211 855-1094 2-221 (275)
478 PRK10790 putative multidrug tr 100.0 5E-34 1.1E-38 359.5 22.0 210 854-1093 339-558 (592)
479 PRK09580 sufC cysteine desulfu 100.0 2.1E-33 4.5E-38 315.4 24.7 219 856-1093 2-230 (248)
480 PRK14251 phosphate ABC transpo 100.0 2.6E-33 5.5E-38 315.2 25.4 210 166-413 18-234 (251)
481 PRK14253 phosphate ABC transpo 100.0 2E-33 4.4E-38 315.6 24.5 209 166-412 17-231 (249)
482 cd03245 ABCC_bacteriocin_expor 100.0 4.3E-34 9.3E-39 315.1 18.7 209 856-1091 3-220 (220)
483 PRK14271 phosphate ABC transpo 100.0 3.3E-33 7.1E-38 317.7 26.5 210 166-413 35-250 (276)
484 PRK14246 phosphate ABC transpo 100.0 2.5E-33 5.5E-38 315.5 25.2 216 855-1093 10-236 (257)
485 PRK14244 phosphate ABC transpo 100.0 2.8E-33 6E-38 314.8 25.5 211 166-413 19-236 (251)
486 PRK14249 phosphate ABC transpo 100.0 3.6E-33 7.7E-38 314.0 26.3 210 166-413 18-234 (251)
487 PRK13539 cytochrome c biogenes 100.0 9.3E-34 2E-38 309.1 20.8 197 856-1082 3-199 (207)
488 PRK14261 phosphate ABC transpo 100.0 3E-33 6.6E-38 314.9 25.6 210 166-413 20-236 (253)
489 PRK14275 phosphate ABC transpo 100.0 3.5E-33 7.7E-38 319.1 26.5 203 166-413 53-269 (286)
490 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.1E-33 2.5E-38 319.6 22.0 198 166-414 18-225 (275)
491 PRK14258 phosphate ABC transpo 100.0 3.8E-33 8.3E-38 315.2 26.3 212 166-413 21-244 (261)
492 cd03251 ABCC_MsbA MsbA is an e 100.0 3.2E-34 7E-39 319.1 17.2 209 857-1093 2-220 (234)
493 PRK14252 phosphate ABC transpo 100.0 4E-33 8.6E-38 316.0 26.2 217 853-1093 14-244 (265)
494 TIGR02868 CydC thiol reductant 100.0 3.3E-34 7.1E-39 356.6 18.7 226 78-382 297-527 (529)
495 TIGR00957 MRP_assoc_pro multi 100.0 6.1E-34 1.3E-38 387.4 22.8 257 78-414 1246-1508(1522)
496 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.1E-34 8.9E-39 319.1 17.4 210 857-1093 2-221 (238)
497 PRK14260 phosphate ABC transpo 100.0 3.4E-33 7.3E-38 315.4 25.0 210 166-413 21-242 (259)
498 PRK11160 cysteine/glutathione 100.0 7.7E-34 1.7E-38 355.3 21.8 212 854-1093 337-557 (574)
499 TIGR02323 CP_lyasePhnK phospho 100.0 4.2E-33 9E-38 313.9 25.6 206 166-413 17-237 (253)
500 COG4181 Predicted ABC-type tra 100.0 1.3E-33 2.8E-38 279.7 18.7 202 160-405 18-226 (228)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.8e-227 Score=2075.65 Aligned_cols=1173 Identities=54% Similarity=0.918 Sum_probs=1095.0
Q ss_pred cchhHhhhHHHHhhCCChhhhhhcccccCCCCcccccccccchHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCC
Q 000787 36 EDDEEALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP 115 (1286)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1286)
+||||+|+|||+|||||++| +++.+... .++|+.+++..++..+.++.....++|+++++.++++|++++ ++|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 44999999999999999999 66653211 279999999999999999999999999999999999999998 889
Q ss_pred ceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHH
Q 000787 116 KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLL 195 (1286)
Q Consensus 116 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 195 (1286)
.++++++++.+++++..| ||++|...+.++.++...+.. ++.+.+||+|+||.++||+|++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999998766 999999999999888766644 55668899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCC
Q 000787 196 LALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1286)
Q Consensus 196 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1286)
++|+|.++..++..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.+++ +..|++++.
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999998878889999999999999999999999999999999999999999999999998876 555655431
Q ss_pred CCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCC
Q 000787 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1286)
Q Consensus 276 ~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD 355 (1286)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 26899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHh
Q 000787 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1286)
Q Consensus 356 ~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~ 435 (1286)
++|+.+++++|++++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHH
Q 000787 436 VTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLL 515 (1286)
Q Consensus 436 v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~ 515 (1286)
+++++++.++|..+..|+.+.++.++.+.|.+++.+.++..+++.++++.+.++.++..++|.++.|+|+++|+.|++++
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhhhhhccccc
Q 000787 516 MKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFF 595 (1286)
Q Consensus 516 ~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y 595 (1286)
++||.+++++++++.+++++++|++|+++.+ ++..+...+.|++||++++.+|+++++++.+++++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999885 55677889999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q 000787 596 PPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFAL 675 (1286)
Q Consensus 596 ~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~ 675 (1286)
+||++.++.+++++|+.+++.++|.+|+||++|+.+++++||++|+++++++++++++|++++++++++.+|+.+|++.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCcccccc------------CC---Cccchhhhhhhcc
Q 000787 676 LVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFT------------QD---SSETLGVQVLKSR 740 (1286)
Q Consensus 676 l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~------------~~---~~~~~G~~~L~~~ 740 (1286)
+++.+++||+|+..+||+||+|++|++|++|+++++++|||++.+|+|.. .. ...+.|.++++.+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 99999999999999999999999999999999999999999999999971 11 2356788999988
Q ss_pred Ccc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCC
Q 000787 741 GFF-----AHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTR 815 (1286)
Q Consensus 741 ~~~-----~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1286)
++. ...+|+|+++|+++||+++|++++++++.|++|..+.+.++..+........... .
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~----------------~ 754 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA----------------G 754 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc----------------c
Confidence 877 7889999999999999999999999999999999888877655443322110000 0
Q ss_pred CCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCc
Q 000787 816 SGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGV 895 (1286)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~ 895 (1286)
..... +. ..+....+++++..|+.+..++++||.|.+++|.+++.+| +++++|+||||.++||.
T Consensus 755 ~~~~~------------~~-~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~ 818 (1391)
T KOG0065|consen 755 SSSEI------------EK-LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGV 818 (1391)
T ss_pred ccccc------------cc-cccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCc
Confidence 00000 00 0001111355778899999999999999999999888877 56889999999999999
Q ss_pred EEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q 000787 896 LTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVD 975 (1286)
Q Consensus 896 ~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~ 975 (1286)
++||||+||||||||||+|+||+++|.++|+|+|||+|+++++|+|++|||+|+|+|.+.+||||.|.|+|+||++.+++
T Consensus 819 LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~ 898 (1391)
T KOG0065|consen 819 LTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVS 898 (1391)
T ss_pred eeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCC
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 000787 976 SETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTV 1054 (1286)
Q Consensus 976 ~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p-~il~LDEPTsgLD~~~~~~v~~~l~~~~ 1054 (1286)
.+++.++||+|++.|+|.+++|.+||.|| +|||++|||||+||+||++|| .||||||||||||++++..|++++|+++
T Consensus 899 ~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla 977 (1391)
T KOG0065|consen 899 DEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLA 977 (1391)
T ss_pred HHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999999 8999999999999999999999999999
Q ss_pred hCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCccchhHHHHHHhCCCccCCCCCCCcccceeeehhhhhhhh
Q 000787 1055 DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELA 1134 (1286)
Q Consensus 1055 ~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~NPad~~l~~~~~~~~~~ 1134 (1286)
++|+||||||||||.++|+.||++++|++||++||+||+|++++++++||++++|+ +||+..||||||||+++.+.+..
T Consensus 978 ~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~NPA~~mLevi~~~~~~~ 1056 (1391)
T KOG0065|consen 978 DTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDENPAEWMLEVIGAGAEAS 1056 (1391)
T ss_pred hcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCCChHHHHHhhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999987 57777799999999999998888
Q ss_pred hcCcHHHHhhccHHHHHHHHHHHhhCCCCCC-CCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 000787 1135 LGIDFTEHYKRSDLYRRNKALIEDLSRPPPG-SKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIAL 1213 (1286)
Q Consensus 1135 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l 1213 (1286)
.+.||++.|++|++++++++++++++.++++ ..+..+.++|++|+|.|++.|+||++++|||+|.|+++|++++++.||
T Consensus 1057 ~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl 1136 (1391)
T KOG0065|consen 1057 LSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGL 1136 (1391)
T ss_pred cCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998 778888899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhchHHHHHHHHHHhcCCCCCHHHHHHHhhcC
Q 000787 1214 LFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVIV 1286 (1286)
Q Consensus 1214 ~~g~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~ 1286 (1286)
++|++||++|+ ++|++||.+|++|++++|.+.+++..++|.+..||.++|||+++||||+.||++||+++
T Consensus 1137 ~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~v 1206 (1391)
T KOG0065|consen 1137 FIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLV 1206 (1391)
T ss_pred hheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHH
Confidence 99999999995 68999999999999999999999888999999999999999999999999999999874
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.2e-206 Score=2034.49 Aligned_cols=1264 Identities=62% Similarity=1.048 Sum_probs=1110.5
Q ss_pred cccccCCCCccCCC---C----CccchhHhhhHHHHhhCCChhhhhhcccccC-----CCC---cccccccccchHhhHH
Q 000787 19 SRWNTNSIGAFSRS---S----REEDDEEALKWAALEKLPTYNRLRKGILTTS-----RGE---ANEVDVYNLGLQERQR 83 (1286)
Q Consensus 19 ~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~ 83 (1286)
++|.. +++|++. + ..|||||+|+|||+||||||+|+|++++.+. .|+ ..|+|+++|+.++++.
T Consensus 19 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1470)
T PLN03140 19 SSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQK 96 (1470)
T ss_pred hhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHH
Confidence 34633 6788542 1 2578999999999999999999999999652 122 2369999999999999
Q ss_pred HHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccc
Q 000787 84 LIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKR 163 (1286)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1286)
+++|++++.++|+++|++++++|.+++|+++|+++|+|+||+|++++.++++.+||++|.+.+.++.+.+.++...+++.
T Consensus 97 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~ 176 (1470)
T PLN03140 97 FIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKT 176 (1470)
T ss_pred HHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988766554444556
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCH
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1286)
+++||+|+||.++||++++|+||||||||||||+|+|+++|+.+++|+|+|||+++++..+++.++||+|+|.|++++||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 78899999999999999999999999999999999999998777899999999998877677889999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+|||.|+++|++.+.++++..+..+++++.++.|+.++|.+|++.+.++.+.+..++++|+.+||++|+||.||++++++
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rg 336 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRG 336 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccC
Confidence 99999999998776666555666677777778888889999999888888888899999999999999999999999999
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|++
T Consensus 337 lSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~i 416 (1470)
T PLN03140 337 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQI 416 (1470)
T ss_pred CCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceE
Confidence 99999999999999999999999999999999999999999999998766789999999999999999999999999999
Q ss_pred EEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCcc
Q 000787 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFD 483 (1286)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~ 483 (1286)
+|+||++++++||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|++++.++.+.++++.+.+
T Consensus 417 vy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 496 (1470)
T PLN03140 417 VYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFD 496 (1470)
T ss_pred EEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999988888887776777888999999999999999888888877766
Q ss_pred ccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHH
Q 000787 484 KSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFF 563 (1286)
Q Consensus 484 ~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff 563 (1286)
+...++.....++|..++++|+++|++|++++++||+..+++|+++.+++|+++|++|++++++.....++..+.|++||
T Consensus 497 ~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff 576 (1470)
T PLN03140 497 KSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLF 576 (1470)
T ss_pred hhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Confidence 65556666666789999999999999999999999999999999999999999999999987665555567778999999
Q ss_pred HHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHHHH
Q 000787 564 AITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALL 643 (1286)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~ 643 (1286)
++++.+++++++++.++.++|||+|||+.+||++|+|++|+++.++|+.++++++|++|+|||+||.+++++||.|++++
T Consensus 577 ~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~ 656 (1470)
T PLN03140 577 SMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLV 656 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCcccc
Q 000787 644 LGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKK 723 (1286)
Q Consensus 644 ~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~ 723 (1286)
++++++++++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||++|+++|+++|||.+..|.+
T Consensus 657 ~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~ 736 (1470)
T PLN03140 657 FLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMN 736 (1470)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred cc-CCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCccc
Q 000787 724 FT-QDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQ 802 (1286)
Q Consensus 724 ~~-~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1286)
.. .+.....|.++|+.+++..++.|+|++++++++|+++|+++++++++|.++......++..+...............
T Consensus 737 ~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1470)
T PLN03140 737 KMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRS 816 (1470)
T ss_pred cccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccc
Confidence 32 23346789999999999999999999999999999999999999999998766655554322111000000000000
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCceE
Q 000787 803 LSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLV 882 (1286)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 882 (1286)
...-............+.... ..... .............++++.+|+.|..++|+||+|.++.+..++..+...+++.
T Consensus 817 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~ 894 (1470)
T PLN03140 817 LSSADGNNTREVAIQRMSNPE-GLSKN-RDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQ 894 (1470)
T ss_pred ccccccccccccccccccccc-ccccc-cccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCce
Confidence 000000000000000000000 00000 0000000001123456677889999999999999998876554444455678
Q ss_pred EeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCHHHHH
Q 000787 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESL 962 (1286)
Q Consensus 883 iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l 962 (1286)
+|+|||+.++||+++||||||||||||||++|+|+.++|..+|+|.+||.+..+..+++.+|||+|+|.+++.+||+|+|
T Consensus 895 iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L 974 (1470)
T PLN03140 895 LLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESL 974 (1470)
T ss_pred EeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHH
Confidence 99999999999999999999999999999999999877778999999998876556677899999999999999999999
Q ss_pred HHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000787 963 LFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1042 (1286)
Q Consensus 963 ~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~ 1042 (1286)
.|++.+|.+...+.++++++++++++.++|.+++|+.+|.+++++|||||||||+||+||+++|+||||||||||||+.+
T Consensus 975 ~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~ 1054 (1470)
T PLN03140 975 IYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1054 (1470)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Confidence 99998887766667777888999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCccchhHHHHHHhCCCccCCCCCCCcccc
Q 000787 1043 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATW 1122 (1286)
Q Consensus 1043 ~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~NPad~ 1122 (1286)
+..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++|||||
T Consensus 1055 a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~ 1134 (1470)
T PLN03140 1055 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATW 1134 (1470)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhh
Confidence 99999999999989999999999999888999999999998899999999999999999999999888889999999999
Q ss_pred eeeehhhhhhhhhcCcHHHHhhccHHHHHHHHHHHhhCCCCCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHH
Q 000787 1123 MLEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTA 1202 (1286)
Q Consensus 1123 ~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~ 1202 (1286)
|||+++.+.+...+.||++.|++|++++++++.++++..+.++.++..++++|++++|+|+++|+||+++++||||.|++
T Consensus 1135 ~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~ 1214 (1470)
T PLN03140 1135 MLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNL 1214 (1470)
T ss_pred hhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHH
Confidence 99999876665666799999999999999988888887776666666667789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhchHHHHHHHHHHhcCCCCCHHHHHHH
Q 000787 1203 VRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALA 1282 (1286)
Q Consensus 1203 ~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a 1282 (1286)
+|+++++++|+++|++||+++++..+++++++++|++|++++|+++.++++++|+|..||+||+|||++|||++.+|++|
T Consensus 1215 ~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la 1294 (1470)
T PLN03140 1215 VRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIA 1294 (1470)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 99999999999999999999988778899999999999999999999999999999999999999999999999999999
Q ss_pred hhcC
Q 000787 1283 QVIV 1286 (1286)
Q Consensus 1283 ~~~~ 1286 (1286)
++++
T Consensus 1295 ~~l~ 1298 (1470)
T PLN03140 1295 QVVC 1298 (1470)
T ss_pred HHHH
Confidence 9874
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2e-163 Score=1630.07 Aligned_cols=1126 Identities=32% Similarity=0.541 Sum_probs=915.4
Q ss_pred cChHHHHHHHHHhhhhcCCCCC--ceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeece
Q 000787 94 VDNERFLLKLKNRIDRVGIDLP--KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDV 171 (1286)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 171 (1286)
.|.+++++.++++.++.+...| +++|+|+||+|++ ...+....||++|.+.+.+..+...+. ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4667777765555555555555 9999999999999 444566789999998887765443331 12344567899999
Q ss_pred eEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCHHHHHH
Q 000787 172 SGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLA 248 (1286)
Q Consensus 172 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1286)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974211 24999999999875432 2456999999999999999999999
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000787 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1286)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1286)
|+++++.+..+... ..+. +..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDG---VSRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCC---CCHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 99877643211000 0000 001123567899999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcC
Q 000787 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1286)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1286)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999998875578999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCcccc---
Q 000787 409 RELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKS--- 485 (1286)
Q Consensus 409 ~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~--- 485 (1286)
++++.+||+++||+||++.++|||+.+++++.+ ++++...+. ....+.++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~-~~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAE-RQIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhh-hhccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 999999999999999999999999999998754 222221111 123578999999999987776666554322110
Q ss_pred ------------chhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccc
Q 000787 486 ------------KSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTD 553 (1286)
Q Consensus 486 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~ 553 (1286)
...+.......|..++|+|+++|++|+++.++||+..++.++++.+++|+++|++|++.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000011223468889999999999999999999999999999999999999999999765432 34
Q ss_pred ccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCch
Q 000787 554 GGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNA 633 (1286)
Q Consensus 554 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 633 (1286)
.+.+.|++||++++.++.++.+++.++.+|++|+|||..++|++++|++|+.+.++|+.++.+++|++|+|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHH
Q 000787 634 GRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVA 713 (1286)
Q Consensus 634 ~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~ 713 (1286)
++||.++++++++..++.+++++++++++++.+|+.+++++++++++|+||+++.++||+||+|++|+||+.|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcccccc--C----------------------CCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 000787 714 NEFLGHSWKKFT--Q----------------------DSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTL 769 (1286)
Q Consensus 714 nef~~~~~~~~~--~----------------------~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l 769 (1286)
|||.+..+.|.. | +.....|.++|+. ++.....|.|.+++++++|+++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887741 1 1123578889985 44445678999999999999999999999
Q ss_pred HHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCccc
Q 000787 770 ALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVL 849 (1286)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (1286)
++.|.++......++............... .........++..... ......+... .......
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~e~~~~~~-----~~~~~~~~~~-~~~~~~~ 751 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGE-----------TSASNKNDIEAGEVLG-----STDLTDESDD-VNDEKDM 751 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhccc-----------ccccccccccccccCC-----CCcccccccc-ccccccc
Confidence 999988654433332211100000000000 0000000000000000 0000000000 0000000
Q ss_pred C--CCCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEE
Q 000787 850 P--FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGN 926 (1286)
Q Consensus 850 ~--~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~ 926 (1286)
| .....++|+|++|.++.+ ++++.+|+|||+.++|||++||||||||||||||++|+|+.++| +.+|+
T Consensus 752 ~~~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~ 822 (1394)
T TIGR00956 752 EKESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGD 822 (1394)
T ss_pred cccCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeE
Confidence 1 112357999999988532 13467999999999999999999999999999999999997644 45699
Q ss_pred EEEcCccCChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 927 ITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 927 i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
|.+||.+... .+++.+|||+|+|.+++.+||+|++.|++.+|.+...+.++++++++++++.++|.+++|+.+|.++ .
T Consensus 823 I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~ 900 (1394)
T TIGR00956 823 RLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-E 900 (1394)
T ss_pred EEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-C
Confidence 9999998753 4678899999999999999999999999998877666677778899999999999999999998764 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~-il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
+|||||||||+||+||+.+|+ ||||||||||||+.++..|++.|++++++|+|||||+|||+..+++.||++++|++||
T Consensus 901 ~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 901 GLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 899999999999999999997 9999999999999999999999999998899999999999977889999999999988
Q ss_pred EEEEeCCCCccchhHHHHHHhCCCccCCCCCCCcccceeeehhhhhhhhhcCcHHHHhhccHHHHHHHHHHHhhCCCCCC
Q 000787 1086 QEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPPG 1165 (1286)
Q Consensus 1086 ~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~NPad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 1165 (1286)
+++|+|+.+++++++++||+++ |.++||+++|||||+||+++...+.....||.+.|++|+.++...+.++.+..+...
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 1059 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSK 1059 (1394)
T ss_pred EEEEECCcccccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhccccc
Confidence 9999999999899999999987 556799999999999999986554444468999999999888776666554433221
Q ss_pred CC---CCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 000787 1166 SK---DLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTA 1242 (1286)
Q Consensus 1166 ~~---~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~f~~ 1242 (1286)
.. +.....+|++|||+|+++|++|+++++||||.|+++|+++++++|+++|++||++++ ++++++|++|++|++
T Consensus 1060 ~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~ 1136 (1394)
T TIGR00956 1060 AEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMA 1136 (1394)
T ss_pred CccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHH
Confidence 11 111224689999999999999999999999999999999999999999999999987 578999999999998
Q ss_pred HHHHHHHhhhhhhhchHHHHHHH-HHHhcCCCCCHHHHHHHhhcC
Q 000787 1243 VLFLGVQYCSSVQPIVSVERTVF-YREKAAGMYAGIPWALAQVIV 1286 (1286)
Q Consensus 1243 ~~~~~~~~~~~~~~~~~~er~v~-~rE~~~~~Y~~~~y~~a~~~~ 1286 (1286)
+++.++. +.+++|.|+.||.+| +||+++|+|++.+|++|++++
T Consensus 1137 ~~~~~~~-~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~ 1180 (1394)
T TIGR00956 1137 TVLFNPL-IQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITV 1180 (1394)
T ss_pred HHHHHHH-HHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 8887776 346678888888885 999999999999999999864
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.2e-82 Score=780.93 Aligned_cols=583 Identities=30% Similarity=0.499 Sum_probs=491.6
Q ss_pred CCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHH
Q 000787 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1286)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1286)
...++++|+|+++++... .+ ..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 357889999999998542 11 4577999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhc
Q 000787 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1286)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1286)
||++|+|+.+....++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+++++.+.. .
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~------- 137 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------L------- 137 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------C-------
Confidence 99999999987667899999999877766677899999999999999999999999999875432 0
Q ss_pred CCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCC
Q 000787 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1286)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsg 353 (1286)
..++.+.+++++++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 138 -----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 138 -----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 112334678999999999999999999998899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHH
Q 000787 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1286)
Q Consensus 354 LD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1286)
||+.++.++++.|+++|+. ++|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++||+||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCch--hhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCccccchhhccccccccCCcHHHHHHHHHHH
Q 000787 434 QEVTSRK--DQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISR 511 (1286)
Q Consensus 434 ~~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 511 (1286)
.++.+.. .+..... ....+..+.++......+..+......... .........++|.|+..+++|
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCCcHHHHHHHHHHH
Confidence 9987742 1110000 000001111110000000000000000000 000111167899999999999
Q ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHH-HHHHHHhhchhhhhhh
Q 000787 512 ELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQR 590 (1286)
Q Consensus 512 ~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~~~~~~~~~~vf~kqr 590 (1286)
.+..+.|++.++..|+++.+++++++|++||+.+.... ......|++||.+.+..+..+. .++.+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999997754333 2235678888888887666555 6889999999999999
Q ss_pred cccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Q 000787 591 DFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTF 670 (1286)
Q Consensus 591 ~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~ 670 (1286)
..++|+.++|++++.+.++|+.++.+++|++++|||+|++++..+|+.+.+++++..+++.+++.+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCccccccC--CCccchhhhhhhccCcccccch
Q 000787 671 GSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQ--DSSETLGVQVLKSRGFFAHEYW 748 (1286)
Q Consensus 671 ~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~--~~~~~~G~~~L~~~~~~~~~~~ 748 (1286)
++++++.+++++||+++.++||.||+|+.|+|+++|++++++.|+|.+....|... ......|.++++..++... .
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--S 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--c
Confidence 99999999999999999999999999999999999999999999999743444332 3456678899998887654 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000787 749 YWLGLGALFGFVLLLNFAYTLALTFLD 775 (1286)
Q Consensus 749 ~w~~~g~l~~~~~~f~~~~~l~l~~~~ 775 (1286)
.|.++.+++++.++|.++.++++++..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 679999999999999999999998864
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6.1e-81 Score=780.84 Aligned_cols=609 Identities=21% Similarity=0.325 Sum_probs=471.2
Q ss_pred CCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHH
Q 000787 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1286)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1286)
.++++++|.|+++.+.......+... +...+..-.. ......+..++++|+|||++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~-~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPK-ISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----cccccccccc-cccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45899999999999754210111100 0010000000 000011223467999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhc
Q 000787 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1286)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1286)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|+|.+++.+||+||+.|++.++..... .
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------T------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------C------
Confidence 999999998874 3589999999987532 235699999999999999999999998765421100 0
Q ss_pred CCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCC
Q 000787 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1286)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsg 353 (1286)
.++...+++++++.+||++++||.||++..++|||||||||+||++|+.+|+||||||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 00112356789999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHH
Q 000787 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1286)
Q Consensus 354 LD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1286)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+++++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999875 5788888888888789999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcC---Cccccc-----hhhc-cccccccCCcHHHH
Q 000787 434 QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHRA-ALTTETYGVGKREL 504 (1286)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~ 504 (1286)
.++++...+.......+.+ ...+++.+.|++.. .++..+.... +....+ ..+. ......+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998754321100000001 11233344443211 1111111100 000000 0000 00112245689999
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHH-hHHHHHHHHHhhc
Q 000787 505 LKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNF-NGFSEISMTIAKL 583 (1286)
Q Consensus 505 ~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~~~~~~~~~ 583 (1286)
+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+.+.|++||.+++.++ ..++.++.+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999653 23456678999998877554 5567888888999
Q ss_pred hhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000787 584 PVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRN 663 (1286)
Q Consensus 584 ~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~ 663 (1286)
++|+|||..++|++++|++|+++.++|+.++.+++|++|+|||+|+.+++++||.|+++++++..++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCcc-----ccccCCCccchhhhhhh
Q 000787 664 MVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW-----KKFTQDSSETLGVQVLK 738 (1286)
Q Consensus 664 ~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~-----~~~~~~~~~~~G~~~L~ 738 (1286)
+.+|+++++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976432 33221110111122233
Q ss_pred ccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000787 739 SRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1286)
Q Consensus 739 ~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~ 775 (1286)
...+. ....|.+++++++++++|+++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 235788999999999999999999998654
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.3e-81 Score=784.70 Aligned_cols=569 Identities=25% Similarity=0.416 Sum_probs=481.0
Q ss_pred cccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCC
Q 000787 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1286)
+.++++|+|+|++++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34577999999999999999999999999999999999998875456899999999876544567899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc-
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM- 320 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1286)
||+|||.|+++++.+.... .++....++++++.+||++++||.||+.+
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998776322100 01122457889999999999999999864
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||+|++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999875 5789999999999999999999999999
Q ss_pred CeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcC
Q 000787 401 GQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT 480 (1286)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 480 (1286)
|+++|+|+++++.+||+++||+||++.+++||+.++.+....... . .....+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998765322110 0 011234566666666555444333221
Q ss_pred Cccccc---hhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccch
Q 000787 481 PFDKSK---SHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1286)
Q Consensus 481 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~ 557 (1286)
...... ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111000 00001122356788999999999999999999999999999999999999999999765432 344556
Q ss_pred hhHHHHHHHHHHHhHH-HHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHH
Q 000787 558 AGATFFAITMVNFNGF-SEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRF 636 (1286)
Q Consensus 558 ~g~lff~~~~~~~~~~-~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 636 (1286)
.|++|+.++..+|.++ ..++.+..++++|+|||..++|++++|++++.+.++|+.++.+++|++++|||+|+.+++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889998888777754 556677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhh
Q 000787 637 FKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEF 716 (1286)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef 716 (1286)
|.++++++++..++.+++.++++++++..+|+.+++++++++++|+||+++.++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-ccccCCC---ccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000787 717 LGHSW-KKFTQDS---SETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFL 774 (1286)
Q Consensus 717 ~~~~~-~~~~~~~---~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~ 774 (1286)
.+..+ .|...+. +...|.++|+.+|+..+ +.|.++++++++.++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 4432111 23458899999888654 458999999999999999999999874
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.8e-79 Score=812.86 Aligned_cols=595 Identities=22% Similarity=0.378 Sum_probs=497.6
Q ss_pred CCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCc
Q 000787 111 GIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSG 190 (1286)
Q Consensus 111 ~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsG 190 (1286)
.++...+.+.|+||+|+++...+.+. ...++.++.+|+|||+.++||++++|+||||||
T Consensus 860 ~~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaG 918 (1470)
T PLN03140 860 VLPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAG 918 (1470)
T ss_pred ccCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCCC
Confidence 34556778999999999965321000 011123457999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHH
Q 000787 191 KTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARRE 270 (1286)
Q Consensus 191 KSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~ 270 (1286)
|||||++|+|+.++. ..+|+|.+||++.++...++.+|||+|+|.|++.+||+|||.|++.++.+... .
T Consensus 919 KTTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~-------~--- 987 (1470)
T PLN03140 919 KTTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV-------S--- 987 (1470)
T ss_pred HHHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC-------C---
Confidence 999999999997642 35899999998875444457799999999999999999999998765421100 0
Q ss_pred HhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecC
Q 000787 271 KAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEI 350 (1286)
Q Consensus 271 ~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEp 350 (1286)
.++....++++++.+||++++|+.||+..+++|||||||||+||++|+.+|++||||||
T Consensus 988 ---------------------~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEP 1046 (1470)
T PLN03140 988 ---------------------KEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEP 1046 (1470)
T ss_pred ---------------------HHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 01112357889999999999999999888889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC-CeEEEEcCh----hHHHHHHHhC-CC-CC
Q 000787 351 STGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD-GQIVYQGPR----ELVLEFFASM-GF-RC 423 (1286)
Q Consensus 351 tsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~c 423 (1286)
|+|||+.++..+++.|++++. .++|+|+++|||..++++.||++++|++ |+++|+|+. +++.+||+++ |+ +|
T Consensus 1047 TsgLD~~~a~~v~~~L~~l~~-~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~ 1125 (1470)
T PLN03140 1047 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKI 1125 (1470)
T ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCC
Confidence 999999999999999999875 5789999999988889999999999996 899999996 6899999997 66 49
Q ss_pred CCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc---CCccccchhhccccccccCCc
Q 000787 424 PKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR---TPFDKSKSHRAALTTETYGVG 500 (1286)
Q Consensus 424 p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~s 500 (1286)
|+..|||||+.++++..... ....++++.|+.++.+++..+++. .+.... +.......|..+
T Consensus 1126 p~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s 1190 (1470)
T PLN03140 1126 KEKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGA---SDLYFATQYSQS 1190 (1470)
T ss_pred CCCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCc---cccccCccccCC
Confidence 99999999999997643211 112467788888877665544332 221111 111123468889
Q ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHH-HHHHH
Q 000787 501 KRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFS-EISMT 579 (1286)
Q Consensus 501 ~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~~~~~ 579 (1286)
+|.|+++|++|+++..+||+.+...|+++.+++|+++|++||+.+.+..+..+.+...|++|+++++..++... .++.+
T Consensus 1191 ~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~ 1270 (1470)
T PLN03140 1191 TWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMV 1270 (1470)
T ss_pred HHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987655544556666789999988887776554 45677
Q ss_pred HhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000787 580 IAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAV 659 (1286)
Q Consensus 580 ~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~ 659 (1286)
..+|++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+||.++++.||.+++++++...++.+++.++++
T Consensus 1271 ~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a 1350 (1470)
T PLN03140 1271 AVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVS 1350 (1470)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCccccccCCC-ccchhhhh-h
Q 000787 660 TGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDS-SETLGVQV-L 737 (1286)
Q Consensus 660 ~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~-~~~~G~~~-L 737 (1286)
++++..+|..++++++.++++|+||++++++||+||+|+||+||+.|++++++.|||.+....+.+++. ....+.++ +
T Consensus 1351 ~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 1430 (1470)
T PLN03140 1351 LTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQ 1430 (1470)
T ss_pred HCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987766655532 12334455 5
Q ss_pred hccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000787 738 KSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDP 776 (1286)
Q Consensus 738 ~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~ 776 (1286)
..+|+. ..|.|.+++++++|+++|.+++++++++++.
T Consensus 1431 ~~~g~~--~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1431 DHYGYD--PDFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred HhcCcC--cccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 667775 4478899999999999999999999999875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.5e-79 Score=761.50 Aligned_cols=842 Identities=22% Similarity=0.272 Sum_probs=467.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhh-hhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRI-DRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1286)
+..++....+++++++..+. +.... ...-..-...+|+|+||++++..
T Consensus 314 f~~a~~aa~~I~~~i~~~~~-----i~~~~~~~~~~~~~~g~ief~nV~FsYPs-------------------------- 362 (1228)
T KOG0055|consen 314 FAKARAAAYRIFETIDRKPS-----IDPYSKGGRVLSSIKGEIEFRNVCFSYPS-------------------------- 362 (1228)
T ss_pred HhccccchHHHHHHhcCCCC-----CCcccccCCcccccccceEEEEEEecCCC--------------------------
Confidence 56778888899998887765 22111 11122335789999999999732
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecC
Q 000787 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1286)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1286)
+ ++..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|++||.+++++.. +.++|.|+|
T Consensus 363 ----R-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Q 434 (1228)
T KOG0055|consen 363 ----R-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQ 434 (1228)
T ss_pred ----C-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeee
Confidence 3 3566999999999999999999999999999999999999998 9999999999987765 478999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
+|.+| ..||+|||.|+. ++...+...++++...+ .--+..|++.+|
T Consensus 435 ePvlF-~~tI~eNI~~G~----~dat~~~i~~a~k~ana-----------------------------~~fi~~lp~g~~ 480 (1228)
T KOG0055|consen 435 EPVLF-ATTIRENIRYGK----PDATREEIEEAAKAANA-----------------------------HDFILKLPDGYD 480 (1228)
T ss_pred chhhh-cccHHHHHhcCC----CcccHHHHHHHHHHccH-----------------------------HHHHHhhHHhhc
Confidence 98555 579999999975 22333344444433211 112456889999
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
|.||++++. |||||||||+|||||+.+|+|||||||||+||+.++..+.+.|++.. .++|+|+.. | +.++.+.+|
T Consensus 481 T~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTivVa-H-RLStIrnaD 555 (1228)
T KOG0055|consen 481 TLVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIVVA-H-RLSTIRNAD 555 (1228)
T ss_pred ccccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEEEe-e-ehhhhhccC
Confidence 999998885 99999999999999999999999999999999999999999999854 456666643 4 345666699
Q ss_pred cEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHH--HhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch--
Q 000787 394 DIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL--QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH-- 469 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-- 469 (1286)
+|++|++|+||+.|+++|+++. ..-.++.+ |+....++. ..+. .. ..++.....+.+.
T Consensus 556 ~I~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~---~~----~~~~~~~s~~~s~~~ 617 (1228)
T KOG0055|consen 556 KIAVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEE---ES----LKEERSRSLKSSSSS 617 (1228)
T ss_pred EEEEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccc---cc----hhhhhhhcccccccc
Confidence 9999999999999999999862 00111221 222211110 0000 00 0000000000000
Q ss_pred ----hhhhHHHhh-cCCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH-------HHHHH
Q 000787 470 ----VGQKISDEL-RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAF-------VAVVY 537 (1286)
Q Consensus 470 ----~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i-------~ali~ 537 (1286)
......... ..+.++....+ ........+ +.|-+.+.+.++.+.+...+..++ .++++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~s--------~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~ 687 (1228)
T KOG0055|consen 618 PSLSRGSNRSNLLSVKPEGEDPEEP--VSEEDEKVS--------FWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVF 687 (1228)
T ss_pred ccccCCccccccccccccccccccc--ccccccccc--------HHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 000000000 00000000000 001112223 334444455555444443333333 23333
Q ss_pred HHHHhccc-CCCcccccccchhhHHHHHHHHHHH--hHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHH
Q 000787 538 MTLFLRTK-MHKDTVTDGGIFAGATFFAITMVNF--NGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFL 614 (1286)
Q Consensus 538 gtlf~~~~-~~~~~~~~~~~~~g~lff~~~~~~~--~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~ 614 (1286)
+.++--.. .+.+..........++|.++....+ +.+......+..... ..++-
T Consensus 688 s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~L--------------------t~R~R---- 743 (1228)
T KOG0055|consen 688 SQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKL--------------------TKRLR---- 743 (1228)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHH----
Confidence 33221101 1111111111123333332222111 111111111111111 11111
Q ss_pred HHHHHHhhhhhccCCCCc---hHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheecc
Q 000787 615 EVAVWVFLSYYVVGYDSN---AGRFFKQYALLL-----GVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFIL 686 (1286)
Q Consensus 615 ~~~i~~~i~Y~~~g~~~~---~~~f~~~~l~~~-----~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i 686 (1286)
...|..+++.=+++-.+ .++....+...- ++..-...+...++++.-.+.+|..++|-+.++++.+..+++
T Consensus 744 -~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~ 822 (1228)
T KOG0055|consen 744 -SMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLI 822 (1228)
T ss_pred -HHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222223333332111 133333322211 111222233344444445555666666544444433222111
Q ss_pred CccchHHHHHHHHhhcH---HHHHHHHHHHHhhcCCccccccCCCccchhhhhhhccCc-------ccccchhHHHHHHH
Q 000787 687 SREDIKKWWKWAYWCSP---LTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGF-------FAHEYWYWLGLGAL 756 (1286)
Q Consensus 687 ~~~~ip~~~~W~~~isP---~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~-------~~~~~~~w~~~g~l 756 (1286)
-...+.. +++.-.+. -.|.-.+.+++|-..+-... ........++..+.- ..-....|.+++.-
T Consensus 823 ~~~~~~~--~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV----~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~ 896 (1228)
T KOG0055|consen 823 LSGYLQK--KFLKGFSKDDKKAYEEASKIAIEAVSNIRTV----AALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFG 896 (1228)
T ss_pred HHHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 00000000 00111111122211100000 000001111111100 00011223333333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhh
Q 000787 757 FGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAE 836 (1286)
Q Consensus 757 ~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (1286)
+...++| +.+.++++|...+-........+.... .....+++..........|+...+...........+
T Consensus 897 ~sqs~~~-~~~A~~f~~G~~Li~~g~~~~~~~~~v---------f~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~d 966 (1228)
T KOG0055|consen 897 FSQSLLF-FVYALSFWYGARLISNGEMTFEDVFRV---------FMALSFTAMALGQASSYAPDISKAKIAAGSIFEILD 966 (1228)
T ss_pred HHHHHHH-HHHHHHHHHhHHHHhcCCcCHHHHHHH---------HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhc
Confidence 2222222 334455555432211111111000000 000000000000000011111100000000000001
Q ss_pred hhc--CCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhh
Q 000787 837 AEA--SRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVL 914 (1286)
Q Consensus 837 ~~~--~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L 914 (1286)
..+ +.....+...|.....++|+||.|.||..+ ..+||+|+|++|++|+.+||||||||||||.+.+|
T Consensus 967 r~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LL 1036 (1228)
T KOG0055|consen 967 RKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLL 1036 (1228)
T ss_pred CCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 111 011112222344456899999999998653 45799999999999999999999999999999999
Q ss_pred cCCCCCceEEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcC
Q 000787 915 AGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE 991 (1286)
Q Consensus 915 ~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~ 991 (1286)
-+... +..|.|.|||.+++. ..+|+.+|.|.|+|.++. -|++||+.|+. . +++.++ +.++++..+
T Consensus 1037 eRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e----Ii~Aak~AN 1104 (1228)
T KOG0055|consen 1037 ERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE----IIEAAKLAN 1104 (1228)
T ss_pred HHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH----HHHHHHHhh
Confidence 87655 678999999998764 457889999999999986 69999999981 1 134332 444555443
Q ss_pred -------CCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Q 000787 992 -------LNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTI 1064 (1286)
Q Consensus 992 -------l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~ 1064 (1286)
|.+=.|+.+|..| .+||||||||++|||||++||+||+|||.||.||+++.+.|+++|.+.. .|||.|+++
T Consensus 1105 aH~FI~sLP~GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIA 1182 (1228)
T KOG0055|consen 1105 AHNFISSLPQGYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIA 1182 (1228)
T ss_pred hHHHHhcCcCcccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEe
Confidence 3445688888775 4799999999999999999999999999999999999999999999874 699999999
Q ss_pred cCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1065 HQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1065 H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|++| ..+.+|.|.++++ |++++.|.-
T Consensus 1183 HRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1183 HRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred cchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 9997 4788999999985 899999974
No 9
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.2e-73 Score=759.22 Aligned_cols=577 Identities=24% Similarity=0.356 Sum_probs=471.3
Q ss_pred ceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHH
Q 000787 116 KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLL 195 (1286)
Q Consensus 116 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 195 (1286)
...++|+||++.+.. ++.++.+|+|||+.++||++++|+|||||||||||
T Consensus 757 ~~~l~~~nl~~~~~~------------------------------~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL 806 (1394)
T TIGR00956 757 EDIFHWRNLTYEVKI------------------------------KKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLL 806 (1394)
T ss_pred CceEEEEeeEEEecC------------------------------CCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHH
Confidence 345899999988732 11235699999999999999999999999999999
Q ss_pred HHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCC
Q 000787 196 LALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1286)
Q Consensus 196 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1286)
++|+|+.++....+|+|.+||++++. ..++.++||+|+|.+++.+||+|||.|+++++.+...
T Consensus 807 ~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~---------------- 869 (1394)
T TIGR00956 807 NVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV---------------- 869 (1394)
T ss_pred HHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC----------------
Confidence 99999987321227999999998753 3467899999999999999999999998876532110
Q ss_pred CCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCc-cceeecCCCCC
Q 000787 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPAL-ALFMDEISTGL 354 (1286)
Q Consensus 276 ~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~-vllLDEptsgL 354 (1286)
..++....++++++.+||++++|+.||+.+. +|||||||||+||++|+.+|+ |||||||||||
T Consensus 870 ---------------~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgL 933 (1394)
T TIGR00956 870 ---------------SKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGL 933 (1394)
T ss_pred ---------------CHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCC
Confidence 0011223578899999999999999997544 899999999999999999997 99999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC-eEEEEcCh----hHHHHHHHhCCC-CCCCCCC
Q 000787 355 DSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG-QIVYQGPR----ELVLEFFASMGF-RCPKRKG 428 (1286)
Q Consensus 355 D~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G-~iv~~G~~----~~~~~~f~~~G~-~cp~~~~ 428 (1286)
|+.++..|++.|+++++ .++|+|+++|||...+++.||+|++|++| +++|+|+. +++.+||+++|+ +||+..|
T Consensus 934 D~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~N 1012 (1394)
T TIGR00956 934 DSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIINYFEKHGAPKCPEDAN 1012 (1394)
T ss_pred CHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHHHHHhcCCCCCCCCCC
Confidence 99999999999999875 57889999998887788999999999997 99999997 678999999996 9999999
Q ss_pred hHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc---CCccccchhhccccccccCCcHHHHH
Q 000787 429 VADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR---TPFDKSKSHRAALTTETYGVGKRELL 505 (1286)
Q Consensus 429 ~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~s~~~~~ 505 (1286)
||||+.++.+...... ...++.+.|+.+...+...+++. .+..............++..+++.|+
T Consensus 1013 pAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~ 1080 (1394)
T TIGR00956 1013 PAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASLWYQF 1080 (1394)
T ss_pred HHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCHHHHH
Confidence 9999999876432110 01234556665554444333221 11110000000112246789999999
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchh
Q 000787 506 KANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPV 585 (1286)
Q Consensus 506 ~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~v 585 (1286)
+.+++|.++..+|++.+...|+++.+++|+++|++|++.+.+ ..+.+...|++|+.+++..+.....++.++.++++
T Consensus 1081 ~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~ 1157 (1394)
T TIGR00956 1081 KLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQGLQNQMFAVFMATVLFNPLIQQYLPPFVAQRDL 1157 (1394)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 999999999999999999999999999999999999977543 34556678888887776655555566677777777
Q ss_pred h-hhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHH-------HHHHHHHHHHHHHHHHHHHHHH
Q 000787 586 F-YKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGR-------FFKQYALLLGVNQMASALFRFI 657 (1286)
Q Consensus 586 f-~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~-------f~~~~l~~~~~~~~~~~l~~~i 657 (1286)
+ +|||..++|++++|++++.+.++|+.++.+++|.+++||++|+.+++.. |+.+++++++...++.+++.++
T Consensus 1158 ~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~ 1237 (1394)
T TIGR00956 1158 YEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFSTLGQMV 1237 (1394)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 9999999999999999999999999999999999999999999887765 9999999999999999999999
Q ss_pred HHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCccccccC-----------
Q 000787 658 AVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQ----------- 726 (1286)
Q Consensus 658 a~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~----------- 726 (1286)
++++++..+|..++++++.++++|+||+++.++||.||+|++|+||++|++++++.|||.+....|...
T Consensus 1238 ~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~ 1317 (1394)
T TIGR00956 1238 ISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTFNPPSGQ 1317 (1394)
T ss_pred HHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCccccceecCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999887655321
Q ss_pred --------------------CC---c----cchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000787 727 --------------------DS---S----ETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFL 774 (1286)
Q Consensus 727 --------------------~~---~----~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~ 774 (1286)
+. + ...|.++|+.+++..++ .|.+++++++|++++ ++.++++.|.
T Consensus 1318 tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~--~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1318 TCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG--RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred CHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc--cccchhhhhHHHHHH-HHHHHhhheE
Confidence 00 1 23678888887765443 589999999998887 6666667664
No 10
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-75 Score=728.01 Aligned_cols=560 Identities=23% Similarity=0.363 Sum_probs=471.7
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCC
Q 000787 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1286)
.++.+|+||+|.++||.+|||||+|||||||||++|||+... +.++|+|++||.+.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 567799999999999999999999999999999999999865 4689999999999987777899999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|||.|.|+|.++.+... ..++....+|++++.++|++++|.+||+.+ +
T Consensus 881 VrESL~fSA~LRlp~~v-------------------------------~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEV-------------------------------SDEEKYEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCcC-------------------------------CHHHHHHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 99999999988643211 112234578999999999999999999998 8
Q ss_pred CCChhHhhHHHHHHHHhcCC-ccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec-C
Q 000787 323 GISGGQKKRVTTGEMMVGPA-LALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS-D 400 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p-~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~-~ 400 (1286)
|||..||||++||..|+.+| .||||||||||||+.++..|++.+|+++. .|+|++|+||||+.++++.||++++|. +
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999987 789999999999999999999999996 5
Q ss_pred CeEEEEcChh----HHHHHHHhCC-CCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHH
Q 000787 401 GQIVYQGPRE----LVLEFFASMG-FRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKIS 475 (1286)
Q Consensus 401 G~iv~~G~~~----~~~~~f~~~G-~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 475 (1286)
|++||.||.. .+++||++.| .+||+..|||||+.|+.+...+.. ...++++.|++|..+++..
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 8999999864 5677999987 899999999999999987643321 1237889999999888776
Q ss_pred Hhhc---CCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccc
Q 000787 476 DELR---TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVT 552 (1286)
Q Consensus 476 ~~l~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~ 552 (1286)
+++. .+... ..........|+.+.|.|++.|++|++...||++.+...|++..++.++++|+.||+.+ .+.+
T Consensus 1076 e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~q 1150 (1391)
T KOG0065|consen 1076 ELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNVQ 1150 (1391)
T ss_pred HHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcHH
Confidence 6543 33332 12222334568899999999999999999999999999999999999999999999877 3456
Q ss_pred cccchhhHHHHHHHHHHHhHHH-HHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCC
Q 000787 553 DGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDS 631 (1286)
Q Consensus 553 ~~~~~~g~lff~~~~~~~~~~~-~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~ 631 (1286)
+.+..++++|.++++...+.-. ..+..-.++-++||||..+.|+..+|.++..+.++|+.++.+.+|.++.||++||..
T Consensus 1151 ~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~ 1230 (1391)
T KOG0065|consen 1151 GLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYW 1230 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchh
Confidence 6777788888887766554443 344445688999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHH
Q 000787 632 NAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAI 711 (1286)
Q Consensus 632 ~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al 711 (1286)
++.+|+.+++..+...+....++.++.+++|+..+|..+.++++.++.+|+||++++..||.||+|+||+||+.|..+++
T Consensus 1231 ~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gl 1310 (1391)
T KOG0065|consen 1231 TASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGL 1310 (1391)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCccccccCC-------CccchhhhhhhccC----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000787 712 VANEFLGHSWKKFTQD-------SSETLGVQVLKSRG----FFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1286)
Q Consensus 712 ~~nef~~~~~~~~~~~-------~~~~~G~~~L~~~~----~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~ 775 (1286)
+...+.+..-.|...+ ...+.|...-..++ +..+...+ ...+.++|.+.+.+++.+..+|.+
T Consensus 1311 i~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~--~~c~~c~y~v~~~~l~~f~~~y~~ 1383 (1391)
T KOG0065|consen 1311 ISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLAT--TACVYCAYTVADAFLAAFNIKYLN 1383 (1391)
T ss_pred HHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcce--eEEEEeeeehHHHHHHHHHHHHHH
Confidence 9999987766553322 23455554444444 32221111 111233455555666666666654
No 11
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.4e-71 Score=737.70 Aligned_cols=224 Identities=28% Similarity=0.412 Sum_probs=193.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++. .++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 4889999887731 12579999999999999999999999999999999999876 4689999999876
Q ss_pred Ch--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000787 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 1012 (1286)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+++|..+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998876653 234445667889999999999888875 5699999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|+|+++ ++..+|||+++|.+ |+++..|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 57889999999985 79999998
Q ss_pred CCccchhHHHHHH
Q 000787 1093 LGRHSCHLISYFE 1105 (1286)
Q Consensus 1093 ~~~~~~~~~~yf~ 1105 (1286)
. +++.+.|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 6 35554443
No 12
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.7e-73 Score=701.62 Aligned_cols=410 Identities=35% Similarity=0.620 Sum_probs=353.4
Q ss_pred CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEc
Q 000787 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITIS 930 (1286)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~ 930 (1286)
.+..+.|+|+++..+.+.. ..+++|+||||.++|||++|||||||||||||||+|+|+..++ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3567899999998865421 3468999999999999999999999999999999999998764 789999999
Q ss_pred CccCChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 931 GYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 931 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
|++.....+++.+|||+|+|.++|.+||+|++.|+|.+|++.+.+.++++++|+++++.+||.+|+|+++|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
||||||+||.||++||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred CCCCccchhHHHHHHhCCCccCCCCCCCcccceeeehhhh--hhhh----hcCcHHHHhhccHHHHHHHH-HHHhhCCCC
Q 000787 1091 GPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAAS--QELA----LGIDFTEHYKRSDLYRRNKA-LIEDLSRPP 1163 (1286)
Q Consensus 1091 G~~~~~~~~~~~yf~~~~g~~~~~~~~NPad~~l~~~~~~--~~~~----~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~ 1163 (1286)
|+. +++.+||+++ |. +||+++|||||++|+++.. .+.. ......+.++..+...+... ..+.+...
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS- 325 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhcccc-
Confidence 997 6899999998 44 5999999999999998842 1110 00011111111111111110 00111111
Q ss_pred CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHH
Q 000787 1164 PGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAV 1243 (1286)
Q Consensus 1164 ~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1243 (1286)
. ..+.....+||.|++.|++|.+++.+|+|.+...|+++.+++|+++|++||++++ +..+++++.|++|+.+
T Consensus 326 ---~--~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 326 ---K--KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFIL 397 (613)
T ss_pred ---c--ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHH
Confidence 1 1111227899999999999999999999999999999999999999999999976 4567779999999999
Q ss_pred HHHHHHhhhhhhhchHHHHHHHHHHhcCCCCCHHHHHHHhhc
Q 000787 1244 LFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVI 1285 (1286)
Q Consensus 1244 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~ 1285 (1286)
.++.+..+..+++.|+.||.+|.||+.+|+|+.++|++|+++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l 439 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTL 439 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 999898888889999999999999999999999999999986
No 13
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.8e-71 Score=704.59 Aligned_cols=809 Identities=20% Similarity=0.273 Sum_probs=450.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.-++..+++|+-+.+..+... .+...+.+.+.+...|.++|.+++=+.
T Consensus 483 ~vqa~VS~~Ri~~fl~~~e~~-----~~~~~~~~~~~~~~~i~i~~~sfsW~~--------------------------- 530 (1381)
T KOG0054|consen 483 LVQAKVSLKRLKEFLLSEELD-----PDSVERSPDEAGENAIEIKNGSFSWDS--------------------------- 530 (1381)
T ss_pred HHHHHHHHHHHHHHhcCcccC-----ccccccCCCCCCCceEEEeeeeEecCC---------------------------
Confidence 346788889998888766541 111122344455667888888877432
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNH 237 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 237 (1286)
....+.|+|+|++|++|+++||+||.|||||+||.+|.|+++.. +|+|.++|. ++||+|++ |
T Consensus 531 ----~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~gs----------iaYv~Q~p-W 592 (1381)
T KOG0054|consen 531 ----ESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNGS----------VAYVPQQP-W 592 (1381)
T ss_pred ----CCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcCe----------EEEecccc-H
Confidence 11223899999999999999999999999999999999999876 999999983 99999976 6
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
+.+.||||||.|+..+. ..+|+...++|..+++.++.|++| .|.||
T Consensus 593 I~ngTvreNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIG 638 (1381)
T KOG0054|consen 593 IQNGTVRENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIG 638 (1381)
T ss_pred hhCCcHHHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceec
Confidence 66789999999998764 478999999999999888888777 59999
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~-~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
++++ +||||||||+++|||++++++|++||+|.|++|+++..+|++ +++.+. .++|+|+ ++| ..+....+|.|+
T Consensus 639 ErGi-nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~IL-VTH-ql~~L~~ad~Ii 713 (1381)
T KOG0054|consen 639 ERGI-NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVIL-VTH-QLQFLPHADQII 713 (1381)
T ss_pred CCcc-CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEE-EeC-chhhhhhCCEEE
Confidence 9998 599999999999999999999999999999999999999996 675432 3456555 455 567888999999
Q ss_pred EecCCeEEEEcChhHHHH---HHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhh
Q 000787 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQK 473 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 473 (1286)
+|++|+|+..|+++|+++ .|+++ .. +.....+.. .....+.......+. +. +.......
T Consensus 714 vl~~G~I~~~Gty~el~~~~~~~~~l-~~------------~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~ 775 (1381)
T KOG0054|consen 714 VLKDGKIVESGTYEELLKSGGDFAEL-AH------------EEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSS 775 (1381)
T ss_pred EecCCeEecccCHHHHHhcchhHHHH-hh------------ccchhhccc---cccccccccccccch-hh-hhhhhhcc
Confidence 999999999999999984 23332 00 000000000 000000000000000 00 00000000
Q ss_pred HHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHH--HHHHHHH-HHHHHHHHHhcccCCCc-
Q 000787 474 ISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIF--KLIQIAF-VAVVYMTLFLRTKMHKD- 549 (1286)
Q Consensus 474 ~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~--~~~~~~i-~ali~gtlf~~~~~~~~- 549 (1286)
..+.. ..................+.-.|... ..+.... ..+.... -+..... +..+....|+..+.+..
T Consensus 776 ~~~~~-~~~~~~~~~~~~~ee~~~G~v~~~vY-----~~Y~~a~-~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~ 848 (1381)
T KOG0054|consen 776 EEEKS-KDEKEEEDKLVQEEERETGKVSWSVY-----KKYIKAA-GGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGE 848 (1381)
T ss_pred ccccc-ccccchhhHHHHHHHHhcCEeeHHHH-----HHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 00000 00000000000000000000001000 1111110 1111111 1111111 11122222322222211
Q ss_pred --cc--ccccch----hhHHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHh
Q 000787 550 --TV--TDGGIF----AGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVF 621 (1286)
Q Consensus 550 --~~--~~~~~~----~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~ 621 (1286)
.. .+...| ..+.+...++.++.++......+.....++. -+-..+++.|++|+++
T Consensus 849 ~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~------------~ml~~Ilrapm~FFdt----- 911 (1381)
T KOG0054|consen 849 DNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD------------KLLNSILRAPMSFFDT----- 911 (1381)
T ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHhCcchhcCC-----
Confidence 00 111112 1112222222222222222222211111111 1234566777777764
Q ss_pred hhhhccCCCCchHHHHHHHHHHHHH---------HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchH
Q 000787 622 LSYYVVGYDSNAGRFFKQYALLLGV---------NQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIK 692 (1286)
Q Consensus 622 i~Y~~~g~~~~~~~f~~~~l~~~~~---------~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip 692 (1286)
.+.||.+..|...... ..+...+..+++.+ .+++...-.+++.++.++.
T Consensus 912 ---------TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~---~vi~~~~P~fli~~~pl~v---------- 969 (1381)
T KOG0054|consen 912 ---------TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGIL---VVISYVTPWFLIAIIPLGV---------- 969 (1381)
T ss_pred ---------CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHH---HHhhHHhHHHHHHHHHHHH----------
Confidence 4567777666532221 11112222222211 1111111111111111111
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHhhcCCccccc-cCCCccchhhhhhhccCccc--------------------ccchhHH
Q 000787 693 KWWKWAYWCSPLTYAQNAIVANEFLGHSWKKF-TQDSSETLGVQVLKSRGFFA--------------------HEYWYWL 751 (1286)
Q Consensus 693 ~~~~W~~~isP~~y~~~al~~nef~~~~~~~~-~~~~~~~~G~~~L~~~~~~~--------------------~~~~~w~ 751 (1286)
+||.--..|.-.+--.....+...... ...+....|..+++.++-.. .....|+
T Consensus 970 -----~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWl 1044 (1381)
T KOG0054|consen 970 -----IYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWL 1044 (1381)
T ss_pred -----HHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 111111111111111111111100000 00001122334444333211 0011344
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCccccc-----ccCCCCCCCCCCCCCCcccc
Q 000787 752 GLGA--LFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLS-----TLGGSSNHNTRSGSTDDIRG 824 (1286)
Q Consensus 752 ~~g~--l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 824 (1286)
++-. +...++++ .... ++........+ +.+++. .+++...+..+. ..+.++
T Consensus 1045 a~Rle~ig~~~v~~-~al~-~vl~~~~~~~~------------------g~vGLslsyal~lt~~l~~~vR~--~~elEn 1102 (1381)
T KOG0054|consen 1045 AVRLELLGNLVVLI-AALF-AVLLPSGLISP------------------GLVGLSLSYALQLTGLLQWLVRQ--SSELEN 1102 (1381)
T ss_pred HHHHHHHHHHHHHH-HHHH-HHHccCCCCCc------------------chHHHHHHHHHHHHHHHHHHHHH--HHHHHh
Confidence 4322 21111111 1111 11111100000 000000 000000000000 001111
Q ss_pred cccccchhh---hhhhhcCCCCCCCcccCC--CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEE
Q 000787 825 QQSSSQSLS---LAEAEASRPKKKGMVLPF--EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTAL 899 (1286)
Q Consensus 825 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al 899 (1286)
.+.++++.. ....+...........+. ....++|+|++..|.. +-..+|||||+.|+|||++||
T Consensus 1103 ~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGI 1171 (1381)
T KOG0054|consen 1103 NMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGI 1171 (1381)
T ss_pred cchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEE
Confidence 111111111 001111111111111122 2357999999877742 234699999999999999999
Q ss_pred EccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCH
Q 000787 900 MGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDS 976 (1286)
Q Consensus 900 ~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~ 976 (1286)
+|++|||||||+++|.+... +.+|+|.|||.++.+ ..+|++++.+||||.++. -|+|. +.|+..
T Consensus 1172 VGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~----------NLDPf~ 1238 (1381)
T KOG0054|consen 1172 VGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRF----------NLDPFD 1238 (1381)
T ss_pred eCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-Ccccc----------ccCccc
Confidence 99999999999999998765 468999999998765 457889999999998764 35555 446667
Q ss_pred HHHHHHHHHHHHHcCCCcccccccC------CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 000787 977 ETRKMFIDEVMELVELNPLRQSLVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1050 (1286)
Q Consensus 977 ~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l 1050 (1286)
+..++.++++||.++|.+...++.+ .+++.++|-||||.+|+||||+++++||+|||+|+++|+++...|+++|
T Consensus 1239 e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tI 1318 (1381)
T KOG0054|consen 1239 EYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTI 1318 (1381)
T ss_pred ccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHH
Confidence 7778889999999999876544432 2356799999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1051 RNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1051 ~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
|+-.+ +||||+++|+.+. + ..+|||++|++ |+++.+|.+.
T Consensus 1319 R~~F~-dcTVltIAHRl~T-V-md~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1319 REEFK-DCTVLTIAHRLNT-V-MDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred HHHhc-CCeEEEEeeccch-h-hhcCeEEEeeC-CeEeecCChH
Confidence 99764 7999999999874 4 45799999996 7999999873
No 14
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.5e-68 Score=720.70 Aligned_cols=212 Identities=22% Similarity=0.301 Sum_probs=179.6
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+||++.|+. +.+.+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999999842 12359999999999999999999999999999999999876 468999999998
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+.+ ..+|+.++||||++.++.. |+||||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 4578899999999998864 9999997531 122 34578888888876543 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++. ...||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~t--I~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT--IIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChHH--HHhCCEEEEEEC
Confidence 45899999999999999999999999999999999999999999999985 48999999999864 566999999986
Q ss_pred CcEEEEeCCCC
Q 000787 1084 GGQEIYVGPLG 1094 (1286)
Q Consensus 1084 gG~~~y~G~~~ 1094 (1286)
|+++.+|+..
T Consensus 1448 -G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 -GRVVEFDTPE 1457 (1622)
T ss_pred -CEEEEeCCHH
Confidence 7999999863
No 15
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-68 Score=717.24 Aligned_cols=217 Identities=19% Similarity=0.305 Sum_probs=180.6
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc------------
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 921 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~------------ 921 (1286)
..++|+||+|.|+.. ++.++|+|+|++|+||+.+||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999999632 1236999999999999999999999999999999999976531
Q ss_pred ----------------------------------------eEEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCCH
Q 000787 922 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTI 958 (1286)
Q Consensus 922 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 958 (1286)
+.+|+|.+||.++.+ ..+++.+|||+|++.++. .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 147999999998643 567889999999998874 799
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000787 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1286)
Q Consensus 959 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~L 1031 (1286)
+|||.|+. ++.+. +.++++++..++.+. .|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 22333 346777777776553 46777754 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCEEEEEecC---cE-EEEeCCC
Q 000787 1032 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GQ-EIYVGPL 1093 (1286)
Q Consensus 1032 DEPTsgLD~~~~~~v~~~l~~~~-~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g---G~-~~y~G~~ 1093 (1286)
|||||+||+.+++.|++.|+++. .+|+|+|+++|+++ ..+.+|+|++|++| |+ ++..|+-
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 36899999999986 46789999999973 67 4578874
No 16
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.3e-67 Score=712.12 Aligned_cols=211 Identities=20% Similarity=0.275 Sum_probs=179.0
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+||++.|+. +.+.+|+|||++|+|||.+||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46999999999842 12469999999999999999999999999999999999876 468999999998
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+.+ ..+++.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 653 4578899999999998874 9999997531 222 34578888888886543 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
..+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4899999999986 4566999999986
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 799999986
No 17
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.1e-67 Score=615.72 Aligned_cols=491 Identities=26% Similarity=0.332 Sum_probs=377.0
Q ss_pred EEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHH
Q 000787 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1286)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1286)
=++.+||++++... + ....+++||||++.+||+++|+|.|||||||+.++
T Consensus 5 lL~V~nL~v~~~~~-~-----------------------------~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~ 54 (539)
T COG1123 5 LLEVENLTVEFATD-G-----------------------------GRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALA 54 (539)
T ss_pred eEEEeceEEEEecC-C-----------------------------cceeeeecceEEecCCcEEEEEcCCCCCHHHHHHH
Confidence 47889999998653 1 22569999999999999999999999999999999
Q ss_pred HhCCCCCC-CCceeEEEEcCccCCCccc-------cceEEEecCCC--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHH
Q 000787 198 LAGKLDPT-LKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELA 267 (1286)
Q Consensus 198 L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~ 267 (1286)
|.|.+++. ...+|+|.++|.++..... .+.++||+|++ .+.|-+||.+.|.-..+..+...
T Consensus 55 i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~--------- 125 (539)
T COG1123 55 LMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGS--------- 125 (539)
T ss_pred HhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcccc---------
Confidence 99999986 4568999999997755433 26799999996 46777999888876554433211
Q ss_pred HHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCcccee
Q 000787 268 RREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFM 347 (1286)
Q Consensus 268 ~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllL 347 (1286)
.++...++.++|+..||++.... +++++.|||||||||.||+||+.+|++|++
T Consensus 126 ------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~rQRv~iAmALa~~P~LLIa 178 (539)
T COG1123 126 ------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMRQRVMIAMALALKPKLLIA 178 (539)
T ss_pred ------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHHHHHHHHHHHhCCCCEEEE
Confidence 12233456788999999987654 678899999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCC
Q 000787 348 DEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRK 427 (1286)
Q Consensus 348 DEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~ 427 (1286)
||||++||..++.+|++.|+++.+ ..++.++.++|+..-+.++||+|+||.+|++|+.|+.++++..+ .
T Consensus 179 DEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p--------~-- 247 (539)
T COG1123 179 DEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNP--------Q-- 247 (539)
T ss_pred CCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhcc--------C--
Confidence 999999999999999999999876 45677788999999999999999999999999999999885411 0
Q ss_pred ChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCccccchhhccccccccCCcHHHHHHH
Q 000787 428 GVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKA 507 (1286)
Q Consensus 428 ~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 507 (1286)
.||.. .+... .|.
T Consensus 248 -----------------------hpYT~-----------------~Ll~a--~p~------------------------- 260 (539)
T COG1123 248 -----------------------HPYTR-----------------GLLAA--VPR------------------------- 260 (539)
T ss_pred -----------------------CcccH-----------------HHHhh--CCC-------------------------
Confidence 01100 00000 000
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhh
Q 000787 508 NISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFY 587 (1286)
Q Consensus 508 ~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~ 587 (1286)
....
T Consensus 261 --------------------------------------~~~~-------------------------------------- 264 (539)
T COG1123 261 --------------------------------------LGDE-------------------------------------- 264 (539)
T ss_pred --------------------------------------cccc--------------------------------------
Confidence 0000
Q ss_pred hhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Q 000787 588 KQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVA 667 (1286)
Q Consensus 588 kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA 667 (1286)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCccccccCCCccchhhhhhhccCcccccc
Q 000787 668 NTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEY 747 (1286)
Q Consensus 668 ~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~ 747 (1286)
..
T Consensus 265 ------------------------------------------------------~~------------------------ 266 (539)
T COG1123 265 ------------------------------------------------------KI------------------------ 266 (539)
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCccccccc
Q 000787 748 WYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQS 827 (1286)
Q Consensus 748 ~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1286)
. .. +
T Consensus 267 -----------------------------------------------~-------------------~~--~-------- 270 (539)
T COG1123 267 -----------------------------------------------I-------------------RL--P-------- 270 (539)
T ss_pred -----------------------------------------------c-------------------cc--c--------
Confidence 0 00 0
Q ss_pred ccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcH
Q 000787 828 SSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGK 907 (1286)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGK 907 (1286)
. .. ..+ ...-++.+|++..+..+..+. . ...+...+++||||.+++||++||+|+|||||
T Consensus 271 ----~------------~~-~~~-~~~ll~V~~l~k~y~~~~~~~-~-~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGK 330 (539)
T COG1123 271 ----R------------RG-PLR-AEPLLSVRNLSKRYGSRKGLF-V-RERGEVKAVDDVSFDLREGETLGLVGESGSGK 330 (539)
T ss_pred ----c------------cc-ccc-cCceeEeeeeeeeeccccccc-c-ccccceeeeeeeeeEecCCCEEEEECCCCCCH
Confidence 0 00 000 011244555554444322111 0 00123569999999999999999999999999
Q ss_pred HHHHhhhcCCCCCceEEEEEEEcCccC--C---hhcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHH
Q 000787 908 TTLMDVLAGRKTGGYITGNITISGYPK--K---QETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRK 980 (1286)
Q Consensus 908 TTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~ 980 (1286)
|||.++|+|... +..|.|.++|.+. . ....++.+-+|+||+ .+.|.+||++.+.-....... ....+++
T Consensus 331 STlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~ 406 (539)
T COG1123 331 STLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERR 406 (539)
T ss_pred HHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--cchHHHH
Confidence 999999999887 4689999999762 1 123456677888876 467999999999876443322 2356677
Q ss_pred HHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CC
Q 000787 981 MFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GR 1058 (1286)
Q Consensus 981 ~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~ 1058 (1286)
++|.++++.++|.+ +.+.. +.+||||||||++|||||+.+|++|++|||||.||+..++.|.+.|+++.++ |.
T Consensus 407 ~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~ 481 (539)
T COG1123 407 ARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGL 481 (539)
T ss_pred HHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCC
Confidence 78999999999986 45555 4679999999999999999999999999999999999999999999999766 99
Q ss_pred EEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1059 TVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1059 tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|.|+++||.+. +.+.|||+++|.+ |++|..||.
T Consensus 482 t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 482 TYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred EEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 99999999974 7789999999985 899999975
No 18
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.6e-67 Score=660.00 Aligned_cols=420 Identities=28% Similarity=0.476 Sum_probs=342.7
Q ss_pred CCceeEEeceeeEeeccchhh--------------hcc--cccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhc
Q 000787 852 EPHSLTFDEVVYSVDMPEEMK--------------VQG--VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 915 (1286)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~--------------~~~--~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~ 915 (1286)
.+..+.|.++.|.++...... ..+ ...+++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999986542100 000 1123567999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc
Q 000787 916 GRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL 995 (1286)
Q Consensus 916 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~ 995 (1286)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999876533 345689999999999999999999999887766555666777889999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhc
Q 000787 996 RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1075 (1286)
Q Consensus 996 ~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~ 1075 (1286)
+|+.+|....++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999997789999
Q ss_pred CEEEEEecCcEEEEeCCCCccchhHHHHHHhCCCccCCCCCCCcccceeeehhhhhhh------hh---cCcHHHHhhcc
Q 000787 1076 DELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQEL------AL---GIDFTEHYKRS 1146 (1286)
Q Consensus 1076 D~~~lL~~gG~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~NPad~~l~~~~~~~~~------~~---~~~~~~~~~~s 1146 (1286)
|++++|++ |+++|.|+. +++++||+++| . +||+++|||||++|+++..... .. .....+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999996 68999999995 4 6999999999999998753210 00 01123344321
Q ss_pred HHHHHHHHHHHhh--CC-CCC-----CCCCCC-CCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 000787 1147 DLYRRNKALIEDL--SR-PPP-----GSKDLY-FPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGS 1217 (1286)
Q Consensus 1147 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~ 1217 (1286)
. .++....++.. .. +.. ..+... ....+..+||+|+++|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 000000 11235678999999999999998 99999999999999999999999
Q ss_pred HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhchHHHHHHHHHHhcCCCCCHHHHHHHhhcC
Q 000787 1218 LFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVIV 1286 (1286)
Q Consensus 1218 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~ 1286 (1286)
+||+++ ..+++++.|++|++++++++.+++++++.|+.||+||+||+++|+|++++|++||+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~ 489 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVG 489 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHH
Confidence 999984 4679999999999999999888888899999999999999999999999999999874
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5e-65 Score=690.23 Aligned_cols=211 Identities=18% Similarity=0.208 Sum_probs=179.1
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999998521 1359999999999999999999999999999999999876 467999999998
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+.+ ..+|+.++||||++.++.. |+||||... .+.+ ++.++++++.+++.+.. |+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~------~~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPF------SQYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCcc------cCCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 754 4578899999999999875 999999621 1223 33478888988886543 4555553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
..+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4899999999986 4667999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++.+|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 899999986
No 20
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.9e-67 Score=654.87 Aligned_cols=397 Identities=33% Similarity=0.534 Sum_probs=345.2
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCH
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 958 (1286)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987643 3589999999987666677889999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000787 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1286)
Q Consensus 959 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~-~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsg 1037 (1286)
+||+.|++.++.+...+.++++++++++++.+||.+++|+.+|.++ .++|||||||||+||+||+++|++|||||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999887777778888899999999999999999999764 578999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCccchhHHHHHHhCCCccCCCCCC
Q 000787 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGY 1117 (1286)
Q Consensus 1038 LD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~ 1117 (1286)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|+||. +++.+||+++| . +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g-~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG-H-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC-C-CCCCCC
Confidence 9999999999999999988999999999999889999999999984 899999997 57899999984 4 699999
Q ss_pred Ccccceeeehhhhhhhh-----hcCcHHHHhhccHHHHHHHHHHHhhCCCCCC---CCCCCCCCccCCCHHHHHHHHHHH
Q 000787 1118 NPATWMLEVSAASQELA-----LGIDFTEHYKRSDLYRRNKALIEDLSRPPPG---SKDLYFPTQFSQSSWIQFVACLWK 1189 (1286)
Q Consensus 1118 NPad~~l~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~R 1189 (1286)
|||||++|+++...+.. ...++.+.|+.|+.+++..+.+.....+.++ ........+|..+|+.|+++|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 99999999987543211 1124667777777666554433321111111 111112346789999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhchHHHHHHHHHHh
Q 000787 1190 QHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREK 1269 (1286)
Q Consensus 1190 ~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~ 1269 (1286)
+++.+||||.++.+|+++++++|+++|++||++++ ++++++++.|++|++++++++.+++.+.+.|+.||.+|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986 467899999999999999999888888899999999999999
Q ss_pred cCCCCCHHHHHHHhhcC
Q 000787 1270 AAGMYAGIPWALAQVIV 1286 (1286)
Q Consensus 1270 ~~~~Y~~~~y~~a~~~~ 1286 (1286)
++|+|++.+|++||+++
T Consensus 427 ~~~~Y~~~~y~la~~l~ 443 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIA 443 (617)
T ss_pred cCCccCHHHHHHHHHHH
Confidence 99999999999999863
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-65 Score=630.03 Aligned_cols=457 Identities=21% Similarity=0.299 Sum_probs=347.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCccc----cceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|.++..... ++.++||+|++.+++
T Consensus 19 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 19 KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 499999999999999999999999999999999999986 5 8999999998765432 356999999988899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.|+......+.. . ..+....++++++.+||++..+..+
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~-~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 141 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIM-D------------------------------YDAMYLRAQKLLAQLKLDINPATPV--- 141 (506)
T ss_pred CCcHHHHhhhcccccccCCc-C------------------------------HHHHHHHHHHHHHHcCCCCCcccch---
Confidence 99999999987532100000 0 0001224567899999987776555
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+|++|+
T Consensus 142 --~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~ 217 (506)
T PRK13549 142 --GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIR 217 (506)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4456668889899999999999999
Q ss_pred CCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000787 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 479 (1286)
+|++++.|+.+++.. .+..+.
T Consensus 218 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 238 (506)
T PRK13549 218 DGRHIGTRPAAGMTE--------------------------------------------DDIITM--------------- 238 (506)
T ss_pred CCEEeeecccccCCH--------------------------------------------HHHHHH---------------
Confidence 999998886442200 000000
Q ss_pred CCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhh
Q 000787 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1286)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1286)
+. + .. .
T Consensus 239 -------------------------------------------------------------~~--~--~~-~-------- 244 (506)
T PRK13549 239 -------------------------------------------------------------MV--G--RE-L-------- 244 (506)
T ss_pred -------------------------------------------------------------hh--C--cC-c--------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHH
Q 000787 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1286)
Q Consensus 560 ~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1286)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 000787 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1286)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1286)
+
T Consensus 245 ----------------------------------------------------~--------------------------- 245 (506)
T PRK13549 245 ----------------------------------------------------T--------------------------- 245 (506)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred ccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000787 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1286)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1286)
. . .+
T Consensus 246 ---------~-------------------------------------------~-~~----------------------- 249 (506)
T PRK13549 246 ---------A-------------------------------------------L-YP----------------------- 249 (506)
T ss_pred ---------c-------------------------------------------c-cc-----------------------
Confidence 0 0 00
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccC
Q 000787 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1286)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~ 879 (1286)
.. . .. + ....++++|+++.++.. +
T Consensus 250 ---------------~~----------------------~-~~-------~-~~~~l~~~~l~~~~~~~----------~ 273 (506)
T PRK13549 250 ---------------RE----------------------P-HT-------I-GEVILEVRNLTAWDPVN----------P 273 (506)
T ss_pred ---------------cc----------------------c-cC-------C-CCceEEEecCccccccc----------c
Confidence 00 0 00 0 00125566666554210 1
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEeccCC---CC
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IH 952 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~ 952 (1286)
++.+|+||||+|++||++||+||||||||||+++|+|...+ +.+|+|.++|.++.. ...++.+||++|++ .+
T Consensus 274 ~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 352 (506)
T PRK13549 274 HIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGI 352 (506)
T ss_pred ccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCC
Confidence 23589999999999999999999999999999999998641 247999999976532 12345689999985 46
Q ss_pred CCCCCHHHHHHHHHhhhcCC--CCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000787 953 SPFVTIYESLLFSAWLRLSP--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1029 (1286)
Q Consensus 953 ~~~lTv~E~l~f~a~lr~~~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il 1029 (1286)
++.+||.|++.+........ ..+.++..+.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||
T Consensus 353 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~ll 427 (506)
T PRK13549 353 VPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKIL 427 (506)
T ss_pred cCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEE
Confidence 77899999998753211110 112333446689999999996 4666653 579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCc
Q 000787 1030 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1286)
Q Consensus 1030 ~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~ 1095 (1286)
||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |+++..|+..+
T Consensus 428 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 428 ILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred EEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 999999999999999999999999888999999999987 57889999999986 79999887643
No 22
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.7e-65 Score=625.77 Aligned_cols=449 Identities=21% Similarity=0.322 Sum_probs=345.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK10762 18 KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQL 94 (501)
T ss_pred EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 35699999998899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.|+........... ..+....++++++.+||++..|..++
T Consensus 95 tv~e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 140 (501)
T PRK10762 95 TIAENIFLGREFVNRFGRID------------------------------WKKMYAEADKLLARLNLRFSSDKLVG---- 140 (501)
T ss_pred cHHHHhhhccccccccCccC------------------------------HHHHHHHHHHHHHHcCCCCCccCchh----
Confidence 99999998643210000000 00012245678999999887765554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||+|++|++|
T Consensus 141 -~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~G 217 (501)
T PRK10762 141 -ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRDG 217 (501)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 5999999999999999999999999999999999999999999998754 3 455666888999999999999999999
Q ss_pred eEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000787 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1286)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 481 (1286)
+++..|+.+++.. ++..+.
T Consensus 218 ~i~~~~~~~~~~~--------------------------------------------~~~~~~----------------- 236 (501)
T PRK10762 218 QFIAEREVADLTE--------------------------------------------DSLIEM----------------- 236 (501)
T ss_pred EEEEecCcCcCCH--------------------------------------------HHHHHH-----------------
Confidence 9998775442100 000000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000787 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1286)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1286)
++ . ..
T Consensus 237 -----------------------------------------------------------~~--~--~~------------ 241 (501)
T PRK10762 237 -----------------------------------------------------------MV--G--RK------------ 241 (501)
T ss_pred -----------------------------------------------------------hc--C--CC------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHH
Q 000787 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1286)
Q Consensus 562 ff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1286)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 000787 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1286)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1286)
.
T Consensus 242 -------------------------------------------------------------------------------~ 242 (501)
T PRK10762 242 -------------------------------------------------------------------------------L 242 (501)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000787 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1286)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1286)
.. . .+
T Consensus 243 ~~-~-------------------------------------------------~~------------------------- 247 (501)
T PRK10762 243 ED-Q-------------------------------------------------YP------------------------- 247 (501)
T ss_pred cc-c-------------------------------------------------cc-------------------------
Confidence 00 0 00
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCce
Q 000787 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1286)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1286)
.. . . +..+..++++|++.
T Consensus 248 -------------~~-------------------~--~----------~~~~~~l~~~~l~~------------------ 265 (501)
T PRK10762 248 -------------RL-------------------D--K----------APGEVRLKVDNLSG------------------ 265 (501)
T ss_pred -------------cc-------------------c--c----------CCCCcEEEEeCccc------------------
Confidence 00 0 0 00001245556541
Q ss_pred EEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEeccCC---CCCC
Q 000787 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSP 954 (1286)
Q Consensus 882 ~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~ 954 (1286)
.+|+|+||+|++||++||+|||||||||||++|+|... +.+|+|.++|.++.. ...++.+|||+|++ .+++
T Consensus 266 ~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~ 343 (501)
T PRK10762 266 PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVL 343 (501)
T ss_pred CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcC
Confidence 26999999999999999999999999999999999875 458999999976532 12345699999995 4678
Q ss_pred CCCHHHHHHHHHhhhcC---CCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000787 955 FVTIYESLLFSAWLRLS---PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1286)
Q Consensus 955 ~lTv~E~l~f~a~lr~~---~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~ 1030 (1286)
.+||.|++.+....... .....++.++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+|||
T Consensus 344 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lll 418 (501)
T PRK10762 344 GMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLI 418 (501)
T ss_pred CCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEE
Confidence 89999999875321110 0122333456688999999995 5666654 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCc
Q 000787 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1286)
Q Consensus 1031 LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~ 1095 (1286)
|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++.|+...
T Consensus 419 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 419 LDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999999999999888999999999987 57889999999985 79999988753
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-65 Score=628.75 Aligned_cols=457 Identities=22% Similarity=0.297 Sum_probs=346.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 19 ~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 95 (510)
T PRK09700 19 HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDEL 95 (510)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998889999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.++...... .+.. +..+ ..+....++++++.+||++..++.+
T Consensus 96 tv~e~l~~~~~~~~~--~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~----- 143 (510)
T PRK09700 96 TVLENLYIGRHLTKK--VCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKV----- 143 (510)
T ss_pred cHHHHhhhccccccc--cccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccch-----
Confidence 999999875421000 0000 0000 0011234677899999987776655
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
.+|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.+++|+|++|++|
T Consensus 144 ~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~G 221 (510)
T PRK09700 144 ANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKDG 221 (510)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999864 3 455666888999999999999999999
Q ss_pred eEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000787 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1286)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 481 (1286)
++++.|+++++.. .+..+.
T Consensus 222 ~i~~~g~~~~~~~--------------------------------------------~~~~~~----------------- 240 (510)
T PRK09700 222 SSVCSGMVSDVSN--------------------------------------------DDIVRL----------------- 240 (510)
T ss_pred EEeeecchhhCCH--------------------------------------------HHHHHH-----------------
Confidence 9999887654210 000000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000787 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1286)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1286)
+. + .. ..
T Consensus 241 -----------------------------------------------------------~~--~--~~-~~--------- 247 (510)
T PRK09700 241 -----------------------------------------------------------MV--G--RE-LQ--------- 247 (510)
T ss_pred -----------------------------------------------------------hc--C--CC-cc---------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHH
Q 000787 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1286)
Q Consensus 562 ff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1286)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 000787 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1286)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1286)
..+
T Consensus 248 ------------------------------------------------------------------------~~~----- 250 (510)
T PRK09700 248 ------------------------------------------------------------------------NRF----- 250 (510)
T ss_pred ------------------------------------------------------------------------ccc-----
Confidence 000
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000787 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1286)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1286)
. . ..+
T Consensus 251 ~----~----------------------------------------------~~~------------------------- 255 (510)
T PRK09700 251 N----A----------------------------------------------MKE------------------------- 255 (510)
T ss_pred c----c----------------------------------------------ccc-------------------------
Confidence 0 0 000
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCce
Q 000787 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1286)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1286)
.. . .. . .+..++++|+++.+ +
T Consensus 256 -------------~~---------------~---------~~------~-~~~~l~~~~l~~~~-------------~-- 276 (510)
T PRK09700 256 -------------NV---------------S---------NL------A-HETVFEVRNVTSRD-------------R-- 276 (510)
T ss_pred -------------cc---------------c---------cC------C-CCcEEEEeCccccC-------------C--
Confidence 00 0 00 0 00136667776432 1
Q ss_pred EEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEeccC---CCCCC
Q 000787 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQN---DIHSP 954 (1286)
Q Consensus 882 ~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~ 954 (1286)
.+|+||||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+|||+|+ ..+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 354 (510)
T PRK09700 277 KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFP 354 (510)
T ss_pred CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcC
Confidence 27999999999999999999999999999999999875 457999999976532 1234568999998 45778
Q ss_pred CCCHHHHHHHHHhhh---cCC--C-CCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000787 955 FVTIYESLLFSAWLR---LSP--E-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1286)
Q Consensus 955 ~lTv~E~l~f~a~lr---~~~--~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~ 1027 (1286)
.+||+|++.+....+ ... . ......++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+
T Consensus 355 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~ 429 (510)
T PRK09700 355 NFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPE 429 (510)
T ss_pred CCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCC
Confidence 899999998753211 000 0 11223335678999999996 6667664 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1028 il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||||||||+|||+.++..+++.|++++++|.|||+++||+. .+.+.||++++|++ |++++.++.
T Consensus 430 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 430 VIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred EEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999999999999999999999878999999999986 57789999999986 789988865
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-64 Score=633.15 Aligned_cols=490 Identities=21% Similarity=0.246 Sum_probs=353.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCC----------Ccc------c-cce
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----------EFV------P-QRT 227 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 227 (1286)
.++|+||||++++|++++|+|||||||||||++|+|.++|+ +|+|.++|..+. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 45999999999999999999999999999999999999987 999999986431 111 1 246
Q ss_pred EEEecCCC--CCCCCCCHHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHH
Q 000787 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1286)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1286)
++||+|++ .+++.+||+||+.++.+.. +.. + .+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999987 5788899999999976432 110 0 011234677899
Q ss_pred HcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecC
Q 000787 305 VLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQP 384 (1286)
Q Consensus 305 ~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~ 384 (1286)
.+||++.. ..-++.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++||.++|+
T Consensus 152 ~~gL~~~~--~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~itHd 228 (623)
T PRK10261 152 QVRIPEAQ--TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFITHD 228 (623)
T ss_pred HCCCCChh--hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEEcCC
Confidence 99996411 01134456799999999999999999999999999999999999999999999986533 4556668999
Q ss_pred hhhHHhhcCcEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHH
Q 000787 385 APETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEA 464 (1286)
Q Consensus 385 ~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1286)
..++.+++|+|++|++|++++.|+++++.. . |.. ++ ...+...
T Consensus 229 l~~~~~~adri~vl~~G~i~~~g~~~~~~~---~-----~~~-------------------------~~----~~~l~~~ 271 (623)
T PRK10261 229 MGVVAEIADRVLVMYQGEAVETGSVEQIFH---A-----PQH-------------------------PY----TRALLAA 271 (623)
T ss_pred HHHHHHhCCEEEEeeCCeecccCCHHHhhc---C-----CCC-------------------------hh----hhhhhhc
Confidence 999999999999999999999998876521 0 000 00 0000000
Q ss_pred HHhchhhhhHHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcc
Q 000787 465 FQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRT 544 (1286)
Q Consensus 465 ~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~ 544 (1286)
. +
T Consensus 272 -------------~--~--------------------------------------------------------------- 273 (623)
T PRK10261 272 -------------V--P--------------------------------------------------------------- 273 (623)
T ss_pred -------------c--C---------------------------------------------------------------
Confidence 0 0
Q ss_pred cCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhh
Q 000787 545 KMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSY 624 (1286)
Q Consensus 545 ~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y 624 (1286)
.... ..
T Consensus 274 ~~~~--~~------------------------------------------------------------------------ 279 (623)
T PRK10261 274 QLGA--MK------------------------------------------------------------------------ 279 (623)
T ss_pred cccc--cc------------------------------------------------------------------------
Confidence 0000 00
Q ss_pred hccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHH
Q 000787 625 YVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPL 704 (1286)
Q Consensus 625 ~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~ 704 (1286)
T Consensus 280 -------------------------------------------------------------------------------- 279 (623)
T PRK10261 280 -------------------------------------------------------------------------------- 279 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhcCCccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccee
Q 000787 705 TYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVI 784 (1286)
Q Consensus 705 ~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~ 784 (1286)
+.......+.. .. . .+
T Consensus 280 -------------~~~~~~~~~~~---------~~-~---------------------------------~~-------- 295 (623)
T PRK10261 280 -------------GLDYPRRFPLI---------SL-E---------------------------------HP-------- 295 (623)
T ss_pred -------------cccCCcccccc---------cc-c---------------------------------cc--------
Confidence 00000000000 00 0 00
Q ss_pred eccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeE
Q 000787 785 TEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYS 864 (1286)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 864 (1286)
....+.. . . ... +....-++++|+++.
T Consensus 296 ------------------------------~~~~~~~----------~------~-~~~------~~~~~~L~~~~l~~~ 322 (623)
T PRK10261 296 ------------------------------AKQEPPI----------E------Q-DTV------VDGEPILQVRNLVTR 322 (623)
T ss_pred ------------------------------cccCccc----------c------c-ccc------cCCCceEEEeeeEEE
Confidence 0000000 0 0 000 000113788888887
Q ss_pred eeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hc
Q 000787 865 VDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ET 938 (1286)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~ 938 (1286)
++..... ... ......+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..
T Consensus 323 y~~~~~~-~~~-~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~ 398 (623)
T PRK10261 323 FPLRSGL-LNR-VTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQA 398 (623)
T ss_pred EcCCCcc-ccc-cCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHH
Confidence 7421000 000 0012469999999999999999999999999999999999876 457999999986532 12
Q ss_pred ccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHH
Q 000787 939 FARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 939 ~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
+++.++||+|++ .+++.+||.|++.+....+. ....++.++++.++++.++|. ...+.. +..||||||||
T Consensus 399 ~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQR 471 (623)
T PRK10261 399 LRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQR 471 (623)
T ss_pred hcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHH
Confidence 356799999997 47888999999988643321 112344556789999999996 456665 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|+|||||+.+|+||||||||+|||+.++..|++.|++++++ |.|||++|||++ .+.+.+|++++|++ |++++.|+.
T Consensus 472 v~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 472 ICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999999765 899999999987 47788999999986 799999986
No 25
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.1e-64 Score=620.46 Aligned_cols=217 Identities=22% Similarity=0.325 Sum_probs=175.6
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEc-Ccc-
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP- 933 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~-g~~- 933 (1286)
++++|+++.++... .+.+.+|+|+||+|++|+++||+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISVD--------RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccCC--------CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 66777777663100 012469999999999999999999999999999999999875 458999996 532
Q ss_pred --CCh------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-----cccccc
Q 000787 934 --KKQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-----LRQSLV 1000 (1286)
Q Consensus 934 --~~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~~ 1000 (1286)
... ...++.+||++|++.+++.+||+|++.+...+. ...+..+++++++++.++|.+ ..+..
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456899999988888999999998754321 123334466889999999975 34444
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEE
Q 000787 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1079 (1286)
Q Consensus 1001 g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~ 1079 (1286)
+..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|+++
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999999765 899999999987 4778899999
Q ss_pred EEecCcEEEEeCCC
Q 000787 1080 LMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1080 lL~~gG~~~y~G~~ 1093 (1286)
+|++ |++++.|+.
T Consensus 500 ~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 500 LMRD-GKIVKIGDP 512 (520)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 789998874
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6.7e-64 Score=620.90 Aligned_cols=464 Identities=22% Similarity=0.295 Sum_probs=345.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCccc-------cceEEEecCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1286)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 359999999999999999999999999999999999998610 128999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc-
Q 000787 236 N--HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC- 311 (1286)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 311 (1286)
. +.+.+||+|++.+..... +.. ..+...+++++++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987653211 100 00112346778999999752
Q ss_pred --ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 000787 312 --ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETY 389 (1286)
Q Consensus 312 --~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~ 389 (1286)
.+.. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +.+||.++|+..++.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 3443 45799999999999999999999999999999999999999999999976533 445666788889999
Q ss_pred hhcCcEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch
Q 000787 390 DLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH 469 (1286)
Q Consensus 390 ~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 469 (1286)
+++|+|++|++|++++.|+++++.+. |. .+ ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------~~--------~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------HP--------YT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC-------------------------CH--------HH-------
Confidence 99999999999999999987654210 00 00 00
Q ss_pred hhhhHHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 000787 470 VGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKD 549 (1286)
Q Consensus 470 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~ 549 (1286)
+. ++... .
T Consensus 254 -----------------------------------------~~----------------------------~~~~~--~- 261 (529)
T PRK15134 254 -----------------------------------------QK----------------------------LLNSE--P- 261 (529)
T ss_pred -----------------------------------------HH----------------------------HHHhC--c-
Confidence 00 00000 0
Q ss_pred ccccccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCC
Q 000787 550 TVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGY 629 (1286)
Q Consensus 550 ~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~ 629 (1286)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHH
Q 000787 630 DSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQN 709 (1286)
Q Consensus 630 ~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~ 709 (1286)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeecccc
Q 000787 710 AIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIE 789 (1286)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~ 789 (1286)
. . .+.
T Consensus 262 -----------------~-----~-----------------------------------------~~~------------ 266 (529)
T PRK15134 262 -----------------S-----G-----------------------------------------DPV------------ 266 (529)
T ss_pred -----------------c-----c-----------------------------------------ccc------------
Confidence 0 0 000
Q ss_pred ccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccc
Q 000787 790 SNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPE 869 (1286)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~ 869 (1286)
.. . . + .+..++++|+++.++...
T Consensus 267 -------------------------~~----------------------~----~-----~-~~~~l~~~~l~~~~~~~~ 289 (529)
T PRK15134 267 -------------------------PL----------------------P----E-----P-ASPLLDVEQLQVAFPIRK 289 (529)
T ss_pred -------------------------cc----------------------C----C-----C-CCCcccccCcEEEeecCc
Confidence 00 0 0 0 000245566666553110
Q ss_pred hhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh------cccceE
Q 000787 870 EMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFARIS 943 (1286)
Q Consensus 870 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~ 943 (1286)
.. .++ ..+.+.+|+||||+|++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+
T Consensus 290 ~~-~~~-~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i 364 (529)
T PRK15134 290 GI-LKR-TVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRI 364 (529)
T ss_pred cc-ccc-ccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhce
Confidence 00 000 0012469999999999999999999999999999999999863 479999999765321 134568
Q ss_pred EEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHH
Q 000787 944 GYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAV 1020 (1286)
Q Consensus 944 gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~ 1020 (1286)
||++|++ .+++.+||+|++.++...+.. .....+.+++++++++.++|. +..+.. +..|||||||||+||+
T Consensus 365 ~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~ 438 (529)
T PRK15134 365 QVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIAR 438 (529)
T ss_pred EEEEeCchhhcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHH
Confidence 9999996 467889999999986533211 123344456788999999997 456655 3579999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1021 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1021 ~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
+|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 439 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 439 ALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999865 899999999986 47788999999986 799998875
No 27
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.4e-64 Score=618.12 Aligned_cols=452 Identities=20% Similarity=0.276 Sum_probs=342.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 25 ~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 101 (510)
T PRK15439 25 EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNL 101 (510)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988764432 24699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.|+.... + +....++++++.+||++..+..+
T Consensus 102 tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~----- 138 (510)
T PRK15439 102 SVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSA----- 138 (510)
T ss_pred cHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCCh-----
Confidence 9999998853100 0 00123566889999987776655
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++|++|
T Consensus 139 ~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~G 216 (510)
T PRK15439 139 GSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRDG 216 (510)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 455666888999999999999999999
Q ss_pred eEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000787 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1286)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 481 (1286)
++++.|+++++... +.+ +.+..
T Consensus 217 ~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~-------------- 238 (510)
T PRK15439 217 TIALSGKTADLSTD---------------DII-----------------------------QAITP-------------- 238 (510)
T ss_pred EEEEecChHHcCHH---------------HHH-----------------------------HHHhC--------------
Confidence 99999987653210 000 00000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000787 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1286)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1286)
+ ..... ....
T Consensus 239 ------------------------------------~--------------------------~~~~~-~~~~------- 248 (510)
T PRK15439 239 ------------------------------------A--------------------------AREKS-LSAS------- 248 (510)
T ss_pred ------------------------------------c--------------------------ccccc-cccc-------
Confidence 0 00000 0000
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHH
Q 000787 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1286)
Q Consensus 562 ff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1286)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 000787 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1286)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1286)
.. .
T Consensus 249 --------------------------------------------------~~---------------------------~ 251 (510)
T PRK15439 249 --------------------------------------------------QK---------------------------L 251 (510)
T ss_pred --------------------------------------------------cc---------------------------c
Confidence 00 0
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000787 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1286)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1286)
. ..+ +
T Consensus 252 ~-----------------~~~---------------------------------~------------------------- 256 (510)
T PRK15439 252 W-----------------LEL---------------------------------P------------------------- 256 (510)
T ss_pred c-----------------ccc---------------------------------c-------------------------
Confidence 0 000 0
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCce
Q 000787 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1286)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1286)
.. . ... +..+..+..+|++.
T Consensus 257 -------------~~-------------------~--~~~--------~~~~~~l~~~~l~~------------------ 276 (510)
T PRK15439 257 -------------GN-------------------R--RQQ--------AAGAPVLTVEDLTG------------------ 276 (510)
T ss_pred -------------cc-------------------c--ccc--------CCCCceEEEeCCCC------------------
Confidence 00 0 000 00011255666641
Q ss_pred EEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----cccceEEEeccCC---CCCC
Q 000787 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSP 954 (1286)
Q Consensus 882 ~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~ 954 (1286)
.+|+|||++|++|+++||+|||||||||||++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~ 354 (510)
T PRK15439 277 EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYL 354 (510)
T ss_pred CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccC
Confidence 14899999999999999999999999999999999865 4579999999765321 1235689999984 4778
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000787 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1286)
Q Consensus 955 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1286)
.+|+.|++......+..........++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||||||
T Consensus 355 ~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDE 429 (510)
T PRK15439 355 DAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDE 429 (510)
T ss_pred CCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECC
Confidence 899999986431111110011222345688999999997 5666653 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1034 PTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
||+|||+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |++++.|..+
T Consensus 430 Pt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 430 PTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred CCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999999999888999999999997 57889999999985 7999888664
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.8e-63 Score=613.71 Aligned_cols=457 Identities=19% Similarity=0.273 Sum_probs=343.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCccc----cceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1286)
++|+|+|+.+++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+++
T Consensus 15 ~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 15 KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 499999999999999999999999999999999999986 5 8999999998765332 356999999988899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.++......+.... ..+....++++++.+||++..+ ++
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~----~~ 137 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNV----TR 137 (500)
T ss_pred CCcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcc----cC
Confidence 9999999988643210000000 0011224567899999976542 12
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
.+..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|++++. . +++|+.++|+..++.++||+|++|+
T Consensus 138 ~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 138 PVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred chhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 3446999999999999999999999999999999999999999999998754 3 4556668899999999999999999
Q ss_pred CCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000787 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 479 (1286)
+|++++.|+.+++.. ....+
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~---------------- 235 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIIT---------------- 235 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHH----------------
Confidence 999987664321000 00000
Q ss_pred CCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhh
Q 000787 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1286)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1286)
.+. + ..
T Consensus 236 ------------------------------------------------------------~~~--~--~~---------- 241 (500)
T TIGR02633 236 ------------------------------------------------------------MMV--G--RE---------- 241 (500)
T ss_pred ------------------------------------------------------------HHh--C--cc----------
Confidence 000 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHH
Q 000787 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1286)
Q Consensus 560 ~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1286)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 000787 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1286)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1286)
.+ +
T Consensus 242 ---------------------------------------------------~~----------~---------------- 244 (500)
T TIGR02633 242 ---------------------------------------------------IT----------S---------------- 244 (500)
T ss_pred ---------------------------------------------------cc----------c----------------
Confidence 00 0
Q ss_pred ccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000787 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1286)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1286)
. .+
T Consensus 245 ----------------------~--------------------------------~~----------------------- 247 (500)
T TIGR02633 245 ----------------------L--------------------------------YP----------------------- 247 (500)
T ss_pred ----------------------c--------------------------------cc-----------------------
Confidence 0 00
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccC
Q 000787 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1286)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~ 879 (1286)
.. . ... ....++++|+++.+... +
T Consensus 248 ---------------~~----------------------~-~~~--------~~~~l~~~~l~~~~~~~----------~ 271 (500)
T TIGR02633 248 ---------------HE----------------------P-HEI--------GDVILEARNLTCWDVIN----------P 271 (500)
T ss_pred ---------------cc----------------------c-cCC--------CCceEEEeCCccccccc----------c
Confidence 00 0 000 00125666666543100 1
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEeccCC---CC
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IH 952 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~ 952 (1286)
++.+|+|+||+|++||++||+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+
T Consensus 272 ~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l 350 (500)
T TIGR02633 272 HRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGI 350 (500)
T ss_pred cccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCc
Confidence 23589999999999999999999999999999999998752 147999999976532 22356789999995 47
Q ss_pred CCCCCHHHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000787 953 SPFVTIYESLLFSAWLRLS--PEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1029 (1286)
Q Consensus 953 ~~~lTv~E~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il 1029 (1286)
++.+||+|++.++..-... ........++.++++++.+++.+ ..+..+ ..||||||||++||++|+.+|++|
T Consensus 351 ~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~ll 425 (500)
T TIGR02633 351 VPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVL 425 (500)
T ss_pred CCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEE
Confidence 8889999999875421110 11222334566889999999964 456553 579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1030 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1030 ~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.||++++|++ |+++..++.
T Consensus 426 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 426 ILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred EEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 999999999999999999999999888999999999997 57889999999985 788887765
No 29
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-63 Score=613.23 Aligned_cols=450 Identities=22% Similarity=0.313 Sum_probs=341.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 18 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK11288 18 KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEM 94 (501)
T ss_pred EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988753321 35799999998889999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.++......+.. + ..+....++.+++.+||++..+..+
T Consensus 95 tv~~~l~~~~~~~~~~~~--------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~----- 138 (501)
T PRK11288 95 TVAENLYLGQLPHKGGIV--------------------N-----------RRLLNYEAREQLEHLGVDIDPDTPL----- 138 (501)
T ss_pred CHHHHHHhcccccccCCC--------------------C-----------HHHHHHHHHHHHHHcCCCCCcCCch-----
Confidence 999999986321000000 0 0011224567899999986665544
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++||.++|+..++.+++|+|++|++|
T Consensus 139 ~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~G 216 (501)
T PRK11288 139 KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKDG 216 (501)
T ss_pred hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 455666888889999999999999999
Q ss_pred eEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000787 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1286)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 481 (1286)
+++..++.... .+.++..+.
T Consensus 217 ~i~~~~~~~~~-------------------------------------------~~~~~~~~~----------------- 236 (501)
T PRK11288 217 RYVATFDDMAQ-------------------------------------------VDRDQLVQA----------------- 236 (501)
T ss_pred EEEeecCcccc-------------------------------------------CCHHHHHHH-----------------
Confidence 99865421100 000000000
Q ss_pred ccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhhHH
Q 000787 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1286)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~l 561 (1286)
+. . ..
T Consensus 237 -----------------------------------------------------------~~--~--~~------------ 241 (501)
T PRK11288 237 -----------------------------------------------------------MV--G--RE------------ 241 (501)
T ss_pred -----------------------------------------------------------hc--C--CC------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHHHH
Q 000787 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1286)
Q Consensus 562 ff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1286)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 000787 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1286)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1286)
.
T Consensus 242 -------------------------------------------------------------------------------~ 242 (501)
T PRK11288 242 -------------------------------------------------------------------------------I 242 (501)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000787 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1286)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1286)
. .. ..
T Consensus 243 ~-----------------------~~---------------------------~~------------------------- 247 (501)
T PRK11288 243 G-----------------------DI---------------------------YG------------------------- 247 (501)
T ss_pred c-----------------------cc---------------------------cc-------------------------
Confidence 0 00 00
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccCce
Q 000787 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1286)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1286)
.. + . +..+..++++|+++.
T Consensus 248 -------------~~--~-----------------------~------~~~~~~l~~~~~~~~----------------- 266 (501)
T PRK11288 248 -------------YR--P-----------------------R------PLGEVRLRLDGLKGP----------------- 266 (501)
T ss_pred -------------cc--c-----------------------c------CCCCcEEEEeccccC-----------------
Confidence 00 0 0 000113555666421
Q ss_pred EEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEeccCC---CCCC
Q 000787 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSP 954 (1286)
Q Consensus 882 ~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~ 954 (1286)
.+++|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 37999999999999999999999999999999999875 468999999976532 12345789999986 4788
Q ss_pred CCCHHHHHHHHHhhhcCC-C--CCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000787 955 FVTIYESLLFSAWLRLSP-E--VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1286)
Q Consensus 955 ~lTv~E~l~f~a~lr~~~-~--~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~ 1030 (1286)
.+|+.|++.++....... . ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+|||
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEE
Confidence 899999998754221100 0 11223345688999999994 5667664 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCc
Q 000787 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1286)
Q Consensus 1031 LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~ 1095 (1286)
|||||+|||+.++..+++.|+++++.|.|||+++||+. ++.+.+|++++|++ |++++.|..++
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 99999999999999999999999888999999999987 58889999999985 79999998754
No 30
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.7e-62 Score=663.45 Aligned_cols=210 Identities=19% Similarity=0.230 Sum_probs=178.5
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 47999999999852 12469999999999999999999999999999999999864 47999999998
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 1003 (1286)
+.+ ..+++.++||||++.+++. |+||||.... .. .++.++++++.++|.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 754 4578899999999999874 9999995321 11 24468899999988654 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
..+||||||||++|||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4799999999986 4567999999986
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++.+|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 799999986
No 31
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3e-62 Score=661.05 Aligned_cols=211 Identities=23% Similarity=0.259 Sum_probs=179.5
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..+.|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999999852 12359999999999999999999999999999999999876 468999999998
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+.. ..+++.+|||||++.++.. |++|||... .+.+ ++.++++++.+++.+.. |+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 753 4678899999999998864 999999531 1222 34588999999987643 5556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1004 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~-p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
..+||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 467999999999999999996 89999999999999999999999999875 4799999999985 567899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999986
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-62 Score=600.89 Aligned_cols=450 Identities=18% Similarity=0.275 Sum_probs=340.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 240 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1286)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35999999999999999999999999999999999999998 9999999998754322 3569999999888999
Q ss_pred CCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
+||+||+.++.. ..+.... ..+....++.+++.+||++..+..+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVD--------------------------------QDKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhcccccccccccC--------------------------------HHHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987531 1110000 0001124567889999987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||++|+.+|++|||||||+|||+.+..++.+.|++++. . +.+|+.++|+..++.++||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4455667889999999999999999
Q ss_pred CCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000787 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 479 (1286)
+|+++..|+++++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876542100 000000
Q ss_pred CCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhh
Q 000787 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1286)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1286)
+. + ..
T Consensus 230 -------------------------------------------------------------~~--~--~~---------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MV--G--RS---------- 234 (491)
T ss_pred -------------------------------------------------------------Hh--C--CC----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHH
Q 000787 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1286)
Q Consensus 560 ~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1286)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 000787 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1286)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1286)
+
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000787 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1286)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1286)
.. .+ +
T Consensus 236 -~~-------------------------------------------------~~--~----------------------- 240 (491)
T PRK10982 236 -TQ-------------------------------------------------RF--P----------------------- 240 (491)
T ss_pred -cc-------------------------------------------------cc--c-----------------------
Confidence 00 00 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccC
Q 000787 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1286)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~ 879 (1286)
. + . .. + .+..+.++|+++..
T Consensus 241 ---------------~---~-------------------~-~~-------~-~~~~i~~~~l~~~~-------------- 260 (491)
T PRK10982 241 ---------------D---K-------------------E-NK-------P-GEVILEVRNLTSLR-------------- 260 (491)
T ss_pred ---------------c---c-------------------c-CC-------C-CCcEEEEeCccccc--------------
Confidence 0 0 0 00 0 01136677776541
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----cccceEEEeccCCC---C
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---H 952 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~---~ 952 (1286)
+.+|+|||+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+.. +
T Consensus 261 -~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~ 337 (491)
T PRK10982 261 -QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGI 337 (491)
T ss_pred -CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCc
Confidence 138999999999999999999999999999999999876 4689999999765421 23456899999853 5
Q ss_pred CCCCCHHHHHHHHHh---hhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000787 953 SPFVTIYESLLFSAW---LRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1028 (1286)
Q Consensus 953 ~~~lTv~E~l~f~a~---lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~i 1028 (1286)
++.+|+.++..+... ............++.+.++++.+++. +..+.. +..|||||||||+||++|+.+|+|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~i 412 (491)
T PRK10982 338 YAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEI 412 (491)
T ss_pred ccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCE
Confidence 678888877433211 01000012233345678899999985 445555 357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1029 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1029 l~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.+|++++|++ |+++..++.+
T Consensus 413 llLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 413 LMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred EEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999999999999888999999999987 57789999999986 7888777654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2e-61 Score=594.04 Aligned_cols=214 Identities=19% Similarity=0.303 Sum_probs=166.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+|+||.+++||+++|+||||||||||+++|+|..+. ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 377888887763 24599999999999999999999999999999999996531 1479999999764
Q ss_pred Ch----hcccceEEEeccCCCCCC--CCCHHHHHHHHHhh--hcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 000787 935 KQ----ETFARISGYCEQNDIHSP--FVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1286)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~~~~--~lTv~E~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 1005 (1286)
.. ...++.+||++|++.+.. ..|+++++.+.... ....... +..+++++++++.++|.+ ..+..+
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~----- 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF----- 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----
Confidence 21 123457999999875543 35677766543211 1111112 223456889999999986 666653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCC-EEEEEecCCcHHHHH-hcCEEEEEec
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR-TVVCTIHQPSIDIFE-AFDELFLMKR 1083 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~-tvi~t~H~ps~~i~~-~~D~~~lL~~ 1083 (1286)
..|||||||||+||++|+.+|++|||||||+|||+.++..+++.|++++++|. |||+++|+++ ++.+ .+|++++|++
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 57999999999999999999999999999999999999999999999987764 6999999986 3655 5899999986
Q ss_pred CcEEEEe
Q 000787 1084 GGQEIYV 1090 (1286)
Q Consensus 1084 gG~~~y~ 1090 (1286)
|++++.
T Consensus 479 -G~i~~~ 484 (490)
T PRK10938 479 -GDIYRY 484 (490)
T ss_pred -CceEEe
Confidence 566654
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-59 Score=517.80 Aligned_cols=469 Identities=24% Similarity=0.325 Sum_probs=366.2
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcccc-------ceEEEecCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFVPQ-------RTAAYISQH 234 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q~ 234 (1286)
...++++|||.+++||.+||+|.||||||-..+.+.|+++.. ...+|+|.|+|.++-....+ ..|++++|+
T Consensus 22 ~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQE 101 (534)
T COG4172 22 TVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQE 101 (534)
T ss_pred ceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecc
Confidence 456999999999999999999999999999999999999863 35589999999997544322 479999999
Q ss_pred C--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000787 235 D--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1286)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1286)
| .+.|-.|+..-|.-..++.... .....+.++-++|+..|+++-.
T Consensus 102 PMtSLNPl~tIg~Qi~E~l~~Hrg~---------------------------------~~~~Ar~r~lelL~~VgI~~p~ 148 (534)
T COG4172 102 PMTSLNPLHTIGKQLAEVLRLHRGL---------------------------------SRAAARARALELLELVGIPEPE 148 (534)
T ss_pred cccccCcHhHHHHHHHHHHHHHhcc---------------------------------cHHHHHHHHHHHHHHcCCCchh
Confidence 7 4677778877776655543110 1112344667789999998765
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000787 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1286)
Q Consensus 313 dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1286)
..+ +.++.+|||||||||.||.||+.+|++||-||||++||.....+|.+.|+++-.. -+..++.|+|+..-+-.++
T Consensus 149 ~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~A 225 (534)
T COG4172 149 KRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKFA 225 (534)
T ss_pred hhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHhh
Confidence 443 4678899999999999999999999999999999999999999999999998654 4667777999999999999
Q ss_pred CcEEEecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhh
Q 000787 393 DDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQ 472 (1286)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 472 (1286)
|+|+||.+|+||++|+.+.+.. .|.+ ||.
T Consensus 226 DrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT------------------ 254 (534)
T COG4172 226 DRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT------------------ 254 (534)
T ss_pred hhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH------------------
Confidence 9999999999999998776532 0000 000
Q ss_pred hHHHhhcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccc
Q 000787 473 KISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVT 552 (1286)
Q Consensus 473 ~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~ 552 (1286)
|.++ +
T Consensus 255 --------------------------------------r~Ll------------------------------~------- 259 (534)
T COG4172 255 --------------------------------------RKLL------------------------------A------- 259 (534)
T ss_pred --------------------------------------HHHH------------------------------h-------
Confidence 0000 0
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCc
Q 000787 553 DGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSN 632 (1286)
Q Consensus 553 ~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~ 632 (1286)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHH
Q 000787 633 AGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIV 712 (1286)
Q Consensus 633 ~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~ 712 (1286)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcCCccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccc
Q 000787 713 ANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNE 792 (1286)
Q Consensus 713 ~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 792 (1286)
. .|
T Consensus 260 -a------------------------------------------------------------eP---------------- 262 (534)
T COG4172 260 -A------------------------------------------------------------EP---------------- 262 (534)
T ss_pred -c------------------------------------------------------------CC----------------
Confidence 0 00
Q ss_pred cccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhh
Q 000787 793 QDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMK 872 (1286)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~ 872 (1286)
. + .+. ...+..+.-++.+|+...++.+..+-
T Consensus 263 ----~-g------------------~~~--------------------------p~~~~~~~ll~~~~v~v~f~i~~g~~ 293 (534)
T COG4172 263 ----S-G------------------DPP--------------------------PLPEDAPVLLEVEDLRVWFPIKGGFL 293 (534)
T ss_pred ----C-C------------------CCC--------------------------CCCCCCCceEEecceEEEEecCCccc
Confidence 0 0 000 00001123455566655555443221
Q ss_pred hcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEe
Q 000787 873 VQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETFARISGYC 946 (1286)
Q Consensus 873 ~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv 946 (1286)
.. ..+...++++||++.++||.+||+|.||||||||=.+|.+... .+|+|.++|.++.. ..+++.+..|
T Consensus 294 ~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvV 368 (534)
T COG4172 294 RR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVV 368 (534)
T ss_pred cc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEE
Confidence 11 1133579999999999999999999999999999999998775 35999999988653 2356788999
Q ss_pred ccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHh
Q 000787 947 EQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELV 1023 (1286)
Q Consensus 947 ~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~ia~~L~ 1023 (1286)
+|||. +.|.+||.+-+.=+.....+ ..+..+++++|.++|+.+||++- ++.. +.++|||||||++|||||+
T Consensus 369 FQDPygSLsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAli 442 (534)
T COG4172 369 FQDPYGSLSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALI 442 (534)
T ss_pred EeCCCCCCCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHh
Confidence 99985 67899999988776555443 56788999999999999999863 3433 4689999999999999999
Q ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1024 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1024 ~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
.+|++++||||||.||-.-+.+|+++|+++.++ |.+-++++||.. -+-.+||++++|++ |++|..||.
T Consensus 443 LkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 443 LKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred cCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999999999999999999999999999999654 999999999986 37778999999985 899999995
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.2e-58 Score=575.99 Aligned_cols=201 Identities=21% Similarity=0.295 Sum_probs=164.4
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 488899988763 2469999999999999999999999999999999999875 4689999854 1
Q ss_pred ChhcccceEEEeccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 000787 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGq 1012 (1286)
..+||++|+. .+++.+||+|++.+....+. .... +..+.++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 67788999999988643221 1111 123457899999964 44555 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeC
Q 000787 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1286)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~-y~G 1091 (1286)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. | |||+++|++. .+.+.||++++|++||++. |.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999987 4778899999998767776 444
Q ss_pred C
Q 000787 1092 P 1092 (1286)
Q Consensus 1092 ~ 1092 (1286)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 3
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-59 Score=575.02 Aligned_cols=198 Identities=17% Similarity=0.254 Sum_probs=165.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+|+|++|++|++++|+|||||||||||++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999988773 2359999999999999999999999999999999999875 45799999873
Q ss_pred ChhcccceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHH
Q 000787 935 KQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgG 1011 (1286)
+.+||++|+.. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE---G--DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC---C--ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 35899999864 456789999986421 11 1 1234578899999994 556655 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-Ee
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~-y~ 1090 (1286)
||||++||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||++||++. .+.+.+|++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999986 459999999987 47788999999986 5776 87
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.9e-58 Score=571.34 Aligned_cols=201 Identities=18% Similarity=0.273 Sum_probs=164.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.+. ++.+|+|||+.|++|+++||+|||||||||||++|+|... +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 478899988763 2469999999999999999999999999999999999875 4589999854 1
Q ss_pred ChhcccceEEEeccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 000787 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGq 1012 (1286)
..+||++|+. .+++.+||+|++.+...... .... +..+.++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 47788999999988642211 1111 123567899999964 44555 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeC
Q 000787 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1286)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~-y~G 1091 (1286)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||+++|++. .+...+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999873 48999999987 4778899999998767766 444
Q ss_pred C
Q 000787 1092 P 1092 (1286)
Q Consensus 1092 ~ 1092 (1286)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 3
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-56 Score=560.76 Aligned_cols=197 Identities=22% Similarity=0.347 Sum_probs=161.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478899988763 2469999999999999999999999999999999999875 45799998641
Q ss_pred ChhcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHH
Q 000787 935 KQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgG 1011 (1286)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.+ ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 122356788999999963 455553 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-Ee
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~-y~ 1090 (1286)
|||||+||++|+.+|+||||||||+|||+.+...+.+.|+++ . .|||+++||+. .+...||++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999986 47788999999986 6776 88
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.1e-55 Score=556.70 Aligned_cols=202 Identities=23% Similarity=0.323 Sum_probs=163.5
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +..|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478899988763 2469999999999999999999999999999999999865 46799988 4321
Q ss_pred ChhcccceEEEeccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHH
Q 000787 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGq 1012 (1286)
.+||++|+. .+.+.+||.|++.+..... ... .....+.++++.+++. +..+..+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 5778899999998753211 011 1133577889999885 3455553 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-cCcEEEEeC
Q 000787 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGQEIYVG 1091 (1286)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~-~gG~~~y~G 1091 (1286)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||+. .+...+|++++|+ +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999986 4778899999997 554445666
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 53
No 40
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=6.7e-56 Score=548.76 Aligned_cols=211 Identities=20% Similarity=0.235 Sum_probs=172.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 477888887653 1 24899999999999999999999999999999999876 457999885
Q ss_pred ChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..+..+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888889999999875211 111 124688999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++||+. .+...+|++++|+ |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 4778899999996 377777764
Q ss_pred Ccc---chhHHHHHHhC
Q 000787 1094 GRH---SCHLISYFEAI 1107 (1286)
Q Consensus 1094 ~~~---~~~~~~yf~~~ 1107 (1286)
... ...+-.|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 321 12344556665
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-54 Score=507.08 Aligned_cols=449 Identities=23% Similarity=0.372 Sum_probs=348.4
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc----ceEEEecCCCCCCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIG 239 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1286)
..++|+||||.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||.+.....++ .-|+.|.|+..+.|
T Consensus 20 gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 20 GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 456999999999999999999999999999999999999999 99999999988655553 46899999999999
Q ss_pred CCCHHHHHHHHhHhcCC-CchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 240 EMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+|||.|||.++...... +. + .....+..+..+|+.+|++...++.|++
T Consensus 97 ~LsVaeNifLgre~~~~~g~----------------------i---------d~~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 97 NLSVAENIFLGREPTRRFGL----------------------I---------DRKAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CccHHHHhhcccccccCCCc----------------------c---------CHHHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 99999999887643220 00 0 0112234567789999997557888875
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
||+||||-|.||+|+..+++|++|||||++|+...+..+++.++++. ..+..||.++|..+|++++||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 99999999999999999999999999999999999999999999975 45777788999999999999999999
Q ss_pred cCCeEEEEcCh-hHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHh
Q 000787 399 SDGQIVYQGPR-ELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDE 477 (1286)
Q Consensus 399 ~~G~iv~~G~~-~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 477 (1286)
.||+++..++. .+. +.+++.
T Consensus 219 RDG~~v~~~~~~~~~--------------------------------------------~~~~lv--------------- 239 (500)
T COG1129 219 RDGRVVGTRPTAAET--------------------------------------------SEDELV--------------- 239 (500)
T ss_pred eCCEEeeecccccCC--------------------------------------------CHHHHH---------------
Confidence 99999876642 211 000000
Q ss_pred hcCCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccch
Q 000787 478 LRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1286)
Q Consensus 478 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~ 557 (1286)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHH
Q 000787 558 AGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFF 637 (1286)
Q Consensus 558 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~ 637 (1286)
-.|+|=
T Consensus 240 ------------------------------------------------------------------~~MvGr-------- 245 (500)
T COG1129 240 ------------------------------------------------------------------RLMVGR-------- 245 (500)
T ss_pred ------------------------------------------------------------------HHhhCc--------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhc
Q 000787 638 KQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFL 717 (1286)
Q Consensus 638 ~~~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~ 717 (1286)
++
T Consensus 246 -----------------------------------------------------------------------------~~- 247 (500)
T COG1129 246 -----------------------------------------------------------------------------EL- 247 (500)
T ss_pred -----------------------------------------------------------------------------ch-
Confidence 00
Q ss_pred CCccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeecccccccccccc
Q 000787 718 GHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRI 797 (1286)
Q Consensus 718 ~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1286)
+. .| +
T Consensus 248 ----~~------------------------------------------------~~--~--------------------- 252 (500)
T COG1129 248 ----ED------------------------------------------------LF--P--------------------- 252 (500)
T ss_pred ----hh------------------------------------------------hc--c---------------------
Confidence 00 00 0
Q ss_pred CCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccc
Q 000787 798 GGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVL 877 (1286)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~ 877 (1286)
. . ... ...+..+++++++..
T Consensus 253 -----------------~-----------------------~-~~~------~~~~~~l~v~~l~~~------------- 272 (500)
T COG1129 253 -----------------E-----------------------P-PEE------GIGEPVLEVRNLSGG------------- 272 (500)
T ss_pred -----------------c-----------------------c-ccc------CCCCcEEEEecCCCC-------------
Confidence 0 0 000 000112344444311
Q ss_pred cCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEeccCC---
Q 000787 878 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND--- 950 (1286)
Q Consensus 878 ~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~--- 950 (1286)
..++||||++++||++||-|-=|||+|-|+++|.|... ...|+|.+||.+... ...+..++||+.|.
T Consensus 273 ----~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~ 346 (500)
T COG1129 273 ----GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSE 346 (500)
T ss_pred ----CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccC
Confidence 14889999999999999999999999999999999554 458999999997643 23456799999874
Q ss_pred CCCCCCCHHHHHHHHHhhhcCC--CCCHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000787 951 IHSPFVTIYESLLFSAWLRLSP--EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1286)
Q Consensus 951 ~~~~~lTv~E~l~f~a~lr~~~--~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~ 1027 (1286)
-++..++|.+|+.++...+... -++....++.+++..+.+++..-. +.. +..||||++|||.|||.|..+|+
T Consensus 347 Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~ 421 (500)
T COG1129 347 GLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPK 421 (500)
T ss_pred cCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCC
Confidence 4678899999999883323221 245555566788999999885322 222 46899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1028 il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
||+|||||.|+|..+...|.+++++++++|++||+++-+.. |+..+||||++|++ |+++-.=+
T Consensus 422 vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~ 484 (500)
T COG1129 422 VLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELD 484 (500)
T ss_pred EEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEec
Confidence 99999999999999999999999999999999999999875 79999999999996 78776433
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.4e-53 Score=536.65 Aligned_cols=200 Identities=18% Similarity=0.268 Sum_probs=158.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|... +..|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 488999988873 12369999999999999999999999999999999999876 45799988652
Q ss_pred ChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHH
Q 000787 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqr 1013 (1286)
..+||++|+.. ..+++.++..+......+ ... ++.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999752 345665654322111111 111 245788999999974 44544 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~-y~G~ 1092 (1286)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888865 3 49999999987 47788999999985 6877 7775
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2e-52 Score=503.77 Aligned_cols=218 Identities=27% Similarity=0.324 Sum_probs=170.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHH
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
+++|+|+|+.+.+|+.++|+|+||||||||||+|+|...|+ +|+|...+. -.++|++|++...+..||.
T Consensus 16 ~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv~ 84 (530)
T COG0488 16 RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTVL 84 (530)
T ss_pred ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccHH
Confidence 45999999999999999999999999999999999999998 999998642 3699999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChH---HHH-HHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDID---VYM-KAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~---~~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1286)
+.+.-+.. ...+...+..... ...++++.. .+. .....++.+.+.+++.+|.-||++.. ++.++
T Consensus 85 ~~v~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~--- 152 (530)
T COG0488 85 DYVIEGFG-----ELRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS--- 152 (530)
T ss_pred HHHHhhhH-----HHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh---
Confidence 99976542 1122222222211 111222111 111 11223445667788999999999876 65554
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
.||||||.||++|++|+.+|++|+|||||++||..+..++-+.|++ ..+ +||.++|++..+-+.|++|+-++.
T Consensus 153 --~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 153 --SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHhhheEEecC
Confidence 5999999999999999999999999999999999999999999985 234 566689999999999999999999
Q ss_pred CeE-EEEcChhHH
Q 000787 401 GQI-VYQGPRELV 412 (1286)
Q Consensus 401 G~i-v~~G~~~~~ 412 (1286)
|++ .|.|..+..
T Consensus 226 g~l~~y~Gny~~~ 238 (530)
T COG0488 226 GKLTPYKGNYSSY 238 (530)
T ss_pred CceeEecCCHHHH
Confidence 987 567766543
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.5e-50 Score=460.74 Aligned_cols=458 Identities=22% Similarity=0.313 Sum_probs=356.0
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc----ceEEEecCCCCCCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIG 239 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1286)
...+++|||+.+++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ .-||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 456999999999999999999999999999999999999999 99999999998665553 46899999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
++||.|||..+..-... .+. ...+...+++++.+..||+--.|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~~------------------------------~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GLI------------------------------DRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-ccc------------------------------CHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999987632100 000 0011234577888999999988888875
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
||-||||||.|-++|+.+|++|||||||+-|-|....++++.|++++. . +.+||.|+|-..|+.+.+|++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~-G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-E-GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999864 4 4556668999999999999999999
Q ss_pred CCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000787 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 479 (1286)
.|+++-.-++. . + .+.+++++.
T Consensus 215 ~Gkvvgt~~~~----------------~------------------------~---~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDPV----------------A------------------------E---TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecCC----------------C------------------------C---CCHHHHHHH---------------
Confidence 99986432100 0 0 000000000
Q ss_pred CCccccchhhccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccchhh
Q 000787 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1286)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1286)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhchhhhhhhcccccChhhHHHHHHHHhccHHHHHHHHHHhhhhhccCCCCchHHHHHH
Q 000787 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1286)
Q Consensus 560 ~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1286)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhheeccCccchHHHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 000787 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1286)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1286)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCccchhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000787 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1286)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1286)
.++.. +
T Consensus 240 --------------~~v~~-------------------------------------~----------------------- 245 (501)
T COG3845 240 --------------REVVL-------------------------------------R----------------------- 245 (501)
T ss_pred --------------Ccccc-------------------------------------c-----------------------
Confidence 00000 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCCCCCcccCCCCceeEEeceeeEeeccchhhhcccccC
Q 000787 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1286)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~ 879 (1286)
. + ..... | .+..++++|++..-+.
T Consensus 246 ----------------~--~--------------------~~~~~-----p-g~~vL~V~~L~v~~~~------------ 269 (501)
T COG3845 246 ----------------V--V--------------------KPPST-----P-GEVVLEVEDLSVKDRR------------ 269 (501)
T ss_pred ----------------c--c--------------------cCCCC-----C-CCeEEEEeeeEeecCC------------
Confidence 0 0 00000 0 0124667777654321
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC----Chh-cccceEEEeccCCC---
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK----KQE-TFARISGYCEQNDI--- 951 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~----~~~-~~~~~~gyv~Q~~~--- 951 (1286)
....+++|||++++||++||.|..|-|-+.|+.+|+|..+. ..|+|.++|.+. ... ..+..++|||.|..
T Consensus 270 ~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~G 347 (501)
T COG3845 270 GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHG 347 (501)
T ss_pred CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCc
Confidence 13579999999999999999999999999999999997652 349999999985 222 23456899999864
Q ss_pred CCCCCCHHHHHHHHHhhhc----CCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000787 952 HSPFVTIYESLLFSAWLRL----SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1286)
Q Consensus 952 ~~~~lTv~E~l~f~a~lr~----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~ 1027 (1286)
+.+.+|+.||+.+...-+. ..-.+..+.+++..++++.++.....-. ...+.||||++||+-+||||..+|+
T Consensus 348 lv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~ 423 (501)
T COG3845 348 LVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPD 423 (501)
T ss_pred cccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCC
Confidence 4678999999988754221 1134566778889999999988632211 1146899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCc
Q 000787 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1286)
Q Consensus 1028 il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~ 1095 (1286)
+|+..+||-|||..+.+.|.+.|.+.++.|+.|++++-+.+ ++++++||+.+|.+ |+++...+...
T Consensus 424 lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 424 LLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred EEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 99999999999999999999999999999999999999998 79999999999995 79998887753
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-44 Score=372.57 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=190.7
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|++.++ ++..+|+|||++|++||+++|+|||||||||||+||.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5678887776 35689999999999999999999999999999999999876 56899999996542
Q ss_pred ----hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 936 ----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 936 ----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
-...|+.+|+|+|+..+||.+||.||+.++-..- ...++++.++...+.|+.+||.+.+|.. +.+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2356788999999999999999999999875322 2456777888899999999999999988 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|||||+|||||+.+|+++++|||||+|||+....|.+.+++++++|.|.||+||...+ .-+.+||+++|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999875 6678999999985 7999999
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 76
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=370.68 Aligned_cols=220 Identities=26% Similarity=0.431 Sum_probs=187.3
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC----ccccceEEEecCCCCCCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----FVPQRTAAYISQHDNHIG 239 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~~~~~~~~yv~Q~d~~~~ 239 (1286)
...+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++.. ...|+.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 345999999999999999999999999999999999999998 9999999976532 123578999999999999
Q ss_pred CCCHHHHHHHHhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 240 EMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
++||.||+..+-.. ++. ..++++..+.++|+.+||.+.+|.+
T Consensus 91 HlTvleNv~lap~~v~~~----------------------------------~k~eA~~~A~~lL~~VGL~~ka~~y--- 133 (240)
T COG1126 91 HLTVLENVTLAPVKVKKL----------------------------------SKAEAREKALELLEKVGLADKADAY--- 133 (240)
T ss_pred cchHHHHHHhhhHHHcCC----------------------------------CHHHHHHHHHHHHHHcCchhhhhhC---
Confidence 99999999987421 111 1223344567889999999988854
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+.+|||||||||+|||||+.+|+++++|||||+|||....++.+.+++++. . +.+.+.++|....+.+.+|||+.|
T Consensus 134 --P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-e-GmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 134 --PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred --ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-c-CCeEEEEechhHHHHHhhheEEEe
Confidence 567999999999999999999999999999999999999999999999986 3 455555889999999999999999
Q ss_pred cCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHh
Q 000787 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~ 435 (1286)
++|+++..|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 455666666777754
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=8.9e-43 Score=398.96 Aligned_cols=202 Identities=19% Similarity=0.238 Sum_probs=156.1
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..+.++|++|.++. +..++++++|-|.+++.+|+||||||||||||+++.|... +..|.+.-.-+.
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc
Confidence 45889999988752 2258999999999999999999999999999999999876 456766543221
Q ss_pred CChhcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 934 KKQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 934 ~~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
.+++..|+- .+.-..++.|+++=. ...+.+.+.+..++..+||..-.+.. ..++||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVV----PMSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCcccccc----chhhcccc
Confidence 123334432 222345666655421 11133445678899999998544433 15789999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||+||..|+.++..|.||+|||||+|||..+...+-++|.+. ..+||.++||-.. |-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999998865 5699999999874 778899999999998999998
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 74
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-42 Score=372.66 Aligned_cols=224 Identities=29% Similarity=0.381 Sum_probs=194.2
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCCC
Q 000787 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDN 236 (1286)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1286)
...++|+|||++|++|++.+|+|+||||||||++++.++..|+ +|+|.++|.++..... |+.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999999 9999999988866543 478999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1286)
++...||.||++|..++.+.. ..+.+.++.++|+.+||++.+|.
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~-- 137 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADR-- 137 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhcc--
Confidence 999999999999998876532 12234578889999999988874
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 317 g~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
++.+|||||||||+|||||+.+|+||++|||||+|||.|+..|++.|+++-+.. +.+|+.++|-++-+-+.||+|.
T Consensus 138 ---yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 138 ---YPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ---CchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 456799999999999999999999999999999999999999999999987654 5666668899999999999999
Q ss_pred EecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhhc
Q 000787 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~ 437 (1286)
+|++|+++++|+..++ |..|.+.-...|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 34466555566665544
No 49
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-42 Score=363.24 Aligned_cols=209 Identities=27% Similarity=0.413 Sum_probs=185.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1286)
+.+++|+|++|++|++++++|||||||||+||+|.++++|+ +|+|.+||.++.+.+. |+.+|||-|.-.+||++
T Consensus 14 ~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~ 90 (309)
T COG1125 14 KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHL 90 (309)
T ss_pred ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCCc
Confidence 45999999999999999999999999999999999999999 9999999999877654 68999999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||.|||.+--.++++.. ++.+.+++++|+.+||+.. ...++++
T Consensus 91 Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~RyP 133 (309)
T COG1125 91 TVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADRYP 133 (309)
T ss_pred cHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcCc
Confidence 99999999877765432 1234568899999999742 2345778
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
.+|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++-+.. +++||.++|+.+|++.++|+|++|++|
T Consensus 134 ~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~G 212 (309)
T COG1125 134 HELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDAG 212 (309)
T ss_pred hhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecCC
Confidence 8999999999999999999999999999999999999999999998875544 555666899999999999999999999
Q ss_pred eEEEEcChhHHHH
Q 000787 402 QIVYQGPRELVLE 414 (1286)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1286)
+++.++++++++.
T Consensus 213 ~i~Q~~~P~~il~ 225 (309)
T COG1125 213 EIVQYDTPDEILA 225 (309)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999999875
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.9e-42 Score=391.21 Aligned_cols=223 Identities=30% Similarity=0.430 Sum_probs=194.0
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|++..+. .++.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCc
Confidence 56677776652 13689999999999999999999999999999999999887 46899999998765
Q ss_pred h--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
. ...++.+||++|++.+++.+||+|+|.|.+.++.... +..+++++++++.++|.+.++.. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 4567789999999999999999999999999986542 45567899999999999855554 467999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g-~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+||+||+++|++|||||||+|||+.++..+++.|++++++| +||+++||+++ ++...||++++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 68888999999985 79999997
Q ss_pred CCccchhHHHHHHh
Q 000787 1093 LGRHSCHLISYFEA 1106 (1286)
Q Consensus 1093 ~~~~~~~~~~yf~~ 1106 (1286)
. .++...+..
T Consensus 221 ~----~~l~~~~~~ 230 (293)
T COG1131 221 P----EELKEKFGG 230 (293)
T ss_pred H----HHHHHhhcc
Confidence 5 345555443
No 51
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.2e-42 Score=359.94 Aligned_cols=231 Identities=27% Similarity=0.384 Sum_probs=201.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+++++++.++ +.+.||+||+++|++||+++||||||+||||||+.|.|..+ +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 57888888775 45789999999999999999999999999999999999887 5689999999876
Q ss_pred Ch------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCC
Q 000787 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSG 1007 (1286)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~ 1007 (1286)
.+ ...++++|+++|+-.+|..+||+||+.|. +|.....+++..++.+..-|+.+||.+. .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp--lre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP--LREHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhhee--hHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 23567899999999999999999999995 4555567788888889999999999887 5555 578
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||++||++|||||+.+|+|||+||||+||||.++..+-++++++.+. |.|+|++|||.. +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999876 999999999997 48999999999996 79
Q ss_pred EEEeCCCCc----cchhHHHHHHhCCC
Q 000787 1087 EIYVGPLGR----HSCHLISYFEAIPG 1109 (1286)
Q Consensus 1087 ~~y~G~~~~----~~~~~~~yf~~~~g 1109 (1286)
++..|++.+ +-.-+.+||....+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 999999842 22345677776543
No 52
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-42 Score=370.24 Aligned_cols=217 Identities=26% Similarity=0.426 Sum_probs=186.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++ .+|+|||+++++|++++|+||||||||||+++|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 578999999884 22 59999999999999999999999999999999999776 4689999999876
Q ss_pred ChhcccceEEEeccCCCC--CCCCCHHHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQETFARISGYCEQNDIH--SPFVTIYESLLFSAWLRLS--PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~--~~~lTv~E~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
....-+..+|||||...+ ...+||+|-+..+..-+.. ...++ +.++.|+++|+.+|+.+++++.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~-~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNK-KDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccH-HHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 554445689999996532 2348999999987443321 12233 336789999999999999999875 5999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
||+||+.|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++||++ .+.+.||++++|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 4899999999997 589999
Q ss_pred CCCCc
Q 000787 1091 GPLGR 1095 (1286)
Q Consensus 1091 G~~~~ 1095 (1286)
|++.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99854
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-42 Score=372.14 Aligned_cols=219 Identities=23% Similarity=0.331 Sum_probs=192.3
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+++++|+..+... ..+...+|+|||++|++||++||+|.||||||||+++|.+... +.+|.|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5677887555321 1123579999999999999999999999999999999999876 57899999997653
Q ss_pred h------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
. ..+|+.+|+++|+..++...||+||+.|...+.. .++++++++|.++++.+||.+.++.. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 2 3467889999999999999999999999876653 56889999999999999999999887 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
|||||||+|||||+.+|+||++|||||+|||.+...|++.|+++.++ |.||++++|+++. +-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999755 9999999999874 7789999999985 8999
Q ss_pred EeCCCC
Q 000787 1089 YVGPLG 1094 (1286)
Q Consensus 1089 y~G~~~ 1094 (1286)
..|+..
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999873
No 54
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.5e-42 Score=373.94 Aligned_cols=218 Identities=27% Similarity=0.398 Sum_probs=190.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++.+|+++.|+ ++.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367889998884 4689999999999999999999999999999999999876 4689999999886
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCC-CCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-VDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..+++.++||||.....+.+||+|.+.++..-....- ...++.++.|+++|+.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 43 4578899999999988889999999998854322111 123344457999999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||+.|||||+++|+||+||||||+||...+..|++.++++++ +|+|||++.||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 59999999999985 7889999999985 89999
Q ss_pred eCCCC
Q 000787 1090 VGPLG 1094 (1286)
Q Consensus 1090 ~G~~~ 1094 (1286)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99974
No 55
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-42 Score=412.78 Aligned_cols=255 Identities=22% Similarity=0.389 Sum_probs=209.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCC---CceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhH
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL---PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1286)
..+..-..+|+++.+|..|. + +.-|... .+..|+|+||+|.|..
T Consensus 431 lmkgvGAs~rvFel~dr~P~-----i----~~~G~~~p~~~~G~IeF~~VsFaYP~------------------------ 477 (716)
T KOG0058|consen 431 LMKGVGASERVFELMDRKPR-----I----PLTGTLAPDHLQGVIEFEDVSFAYPT------------------------ 477 (716)
T ss_pred HHHhcchHHHHHHHhccCCC-----C----CCCCccccccccceEEEEEeeeecCC------------------------
Confidence 44556667888988887765 2 2124333 4678999999999843
Q ss_pred hhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEe
Q 000787 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1286)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1286)
+ +..+||+|+||+|+|||.|||+||||+||||+.++|.++++|+ +|+|++||+|+.++++ ++.+|+|
T Consensus 478 ------R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V 547 (716)
T KOG0058|consen 478 ------R-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLV 547 (716)
T ss_pred ------C-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeee
Confidence 2 3467999999999999999999999999999999999999999 9999999999998876 4889999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000787 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1286)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1286)
.|+|.+|. .||+|||.|+.. ....|.+.++++....++ . +.+++++
T Consensus 548 ~QEPvLFs-~sI~eNI~YG~~----~~t~e~i~~AAk~ANah~--------------------------F---I~~~p~g 593 (716)
T KOG0058|consen 548 GQEPVLFS-GSIRENIAYGLD----NATDEEIEAAAKMANAHE--------------------------F---ITNFPDG 593 (716)
T ss_pred eccceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhChHH--------------------------H---HHhCccc
Confidence 99998776 699999999864 223334444443332211 1 4579999
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000787 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1286)
Q Consensus 312 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1286)
+||.||+++. .||||||||++|||||+++|+||||||.||+||+.+...+.+.|.+..+ ++|+++ |.| +.++.+.
T Consensus 594 Y~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAH-RLSTV~~ 668 (716)
T KOG0058|consen 594 YNTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAH-RLSTVRH 668 (716)
T ss_pred cccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eeh-hhhHhhh
Confidence 9999999887 5999999999999999999999999999999999999999999988653 355554 444 5789999
Q ss_pred cCcEEEecCCeEEEEcChhHHHH
Q 000787 392 FDDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|+|+++++|++++.|+++|+++
T Consensus 669 Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 669 ADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred ccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999975
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-42 Score=364.25 Aligned_cols=204 Identities=25% Similarity=0.371 Sum_probs=181.4
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++++++.+. ...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 366778877764 2579999999999999999999999999999999999887 5689999999887
Q ss_pred ChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
. .....+|||+|++.++|++||+||+.|+...+. .+++++++++++.++.+||.+..+.. +.+|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 3 234568999999999999999999999876653 35566777999999999999999987 4689999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
||+|||||+.+|+||+||||++.||+.++..+++.|.++.+ +++|||++|||.+ |...++|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999864 4899999999997 677889999999864
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=384.02 Aligned_cols=217 Identities=30% Similarity=0.448 Sum_probs=193.8
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc-ceEEEecCCCCCCCCCCHHH
Q 000787 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDNHIGEMTVRE 245 (1286)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1286)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998775 89999999999999999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000787 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1286)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1286)
||.|+.+.++.. .++.+.+++++.+.|+|++..|.. +++||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 999999876532 112345688899999999988754 56799
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEE
Q 000787 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1286)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1286)
|||||||++||||+.+|++++||||+|.||...+..+...|+++-+ .-++++|.++|+..|+..++|+|++|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999998644 455666668999999999999999999999999
Q ss_pred EcChhHHHHHHHhCCCCCCCCCChHHHHH
Q 000787 406 QGPRELVLEFFASMGFRCPKRKGVADFLQ 434 (1286)
Q Consensus 406 ~G~~~~~~~~f~~~G~~cp~~~~~adfl~ 434 (1286)
.|++.++ |..|.+.-+|+|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 45677777777763
No 58
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=383.86 Aligned_cols=222 Identities=30% Similarity=0.437 Sum_probs=196.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCH
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1286)
..+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+ +|.+++|+|+-.+||+|||
T Consensus 18 ~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV 94 (352)
T COG3842 18 FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTV 94 (352)
T ss_pred eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcH
Confidence 45999999999999999999999999999999999999999 9999999999998877 4889999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.|+.+.++... ..+...+++++|+.++|++.++ +.+.+
T Consensus 95 ~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-----R~p~q 136 (352)
T COG3842 95 EENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-----RKPHQ 136 (352)
T ss_pred HHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh-----hChhh
Confidence 999999987443111 1123457888999999998666 45567
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||++||||+.+|++|+||||.|+||..-+.++..-|+++.+.. +++.|.++|+..|+..++|+|++|++|+|
T Consensus 137 LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I 215 (352)
T COG3842 137 LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRI 215 (352)
T ss_pred hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCce
Confidence 99999999999999999999999999999999999999999999987655 56666689999999999999999999999
Q ss_pred EEEcChhHHHHHHHhCCCCCCCCCChHHHHHhh
Q 000787 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1286)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v 436 (1286)
...|+++++ |..|...-+|+|+-+.
T Consensus 216 ~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 216 EQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 999999998 5678888889998654
No 59
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.7e-41 Score=370.07 Aligned_cols=210 Identities=34% Similarity=0.475 Sum_probs=180.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc---ceEEEecCCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEM 241 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1286)
++||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.+
T Consensus 15 ~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~ 91 (258)
T COG1120 15 KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGL 91 (258)
T ss_pred eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCc
Confidence 35999999999999999999999999999999999999998 99999999999877654 7899999998888999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+|-+.++..-.. + ... ...++....++..|+.+|+.+.++..+.
T Consensus 92 tV~d~V~~GR~p~~-~-----------------~~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~---- 137 (258)
T COG1120 92 TVYELVLLGRYPHL-G-----------------LFG------------RPSKEDEEIVEEALELLGLEHLADRPVD---- 137 (258)
T ss_pred EEeehHhhcCCccc-c-----------------ccc------------CCCHhHHHHHHHHHHHhCcHHHhcCccc----
Confidence 99999998853210 0 000 0011122357888999999999886654
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
.|||||||||.||+||+++|++|+||||||+||...+.++++.++++.+.. +.+||.++|+...+.++||++++|++|
T Consensus 138 -~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~G 215 (258)
T COG1120 138 -ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKDG 215 (258)
T ss_pred -ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 699999999999999999999999999999999999999999999998654 455555788999999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
+++.+|++++++
T Consensus 216 ~i~a~G~p~evl 227 (258)
T COG1120 216 KIVAQGTPEEVL 227 (258)
T ss_pred eEEeecCcchhc
Confidence 999999998875
No 60
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.8e-41 Score=358.02 Aligned_cols=193 Identities=28% Similarity=0.438 Sum_probs=168.3
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcc-cceEEEeccCCCCC
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETF-ARISGYCEQNDIHS 953 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~gyv~Q~~~~~ 953 (1286)
..+|++||++|++||++||||||||||||||++|.|... +.+|.+.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 579999999999999999999999999999999999877 468999999976542 123 35799999999999
Q ss_pred CCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccc-cccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000787 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1286)
Q Consensus 954 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LD 1032 (1286)
|.+||+||+.+...+... ....+++.++++++.+||.+..+ .. +.+|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22256677899999999986665 44 4679999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1033 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1033 EPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
|||.+||+.++..|++.+++++++ |+|||++|||| ++...|||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999866 99999999998 4788999999999753
No 61
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=354.84 Aligned_cols=213 Identities=26% Similarity=0.365 Sum_probs=190.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++|+||+..+. .+.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|+|||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 56788876653 4579999999999999999999999999999999999877 56899999999875
Q ss_pred h---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCH
Q 000787 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSg 1010 (1286)
. ..+||.+|||-|+-.+||++||.||+.+--.+. ..++++.+++++|+|+.+||.+ ++++. +.+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 457889999999999999999999999865554 4577888999999999999985 67776 478999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||+|||.+||||+++|+||+||||+++|||.++..+++.++++.++ |+|||++|||.. +.+.+.||+.+|+. |+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 999999999987 68899999999984 79988
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
++++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8876
No 62
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-41 Score=353.07 Aligned_cols=220 Identities=26% Similarity=0.334 Sum_probs=187.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|++-.++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +..|+|.++|..+
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 477888877664 45689999999999999999999999999999999999765 5689999999754
Q ss_pred Ch------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-----CCCCHHHHHHHHHHHHHHcCCCcccccccCCC
Q 000787 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLVGLP 1003 (1286)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 1003 (1286)
.. ..+++.+||++|++.+.+.+||.+|+..+..-+.+ -....++.+..+-++|+.+|+.+.+-...
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 34678899999999999999999999976432211 12233445566778999999998887764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+.|||||+|||+|||+|+.+|+||+.|||+++|||.++..||+.|++++++ |.|||++.||... ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 469999999999999999999999999999999999999999999999754 9999999999875 678999999998
Q ss_pred cCcEEEEeCCCCc
Q 000787 1083 RGGQEIYVGPLGR 1095 (1286)
Q Consensus 1083 ~gG~~~y~G~~~~ 1095 (1286)
. |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999854
No 63
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=355.76 Aligned_cols=192 Identities=27% Similarity=0.393 Sum_probs=169.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHH
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
..+|+|+|++|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 45999999999999999999999999999999999999998 999999999873 4567899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+....+... .+...+++++|+.+||.+..| +++.+|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----KYPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----cCcccc
Confidence 99999987764211 111235778899999988776 556789
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
||||||||+|||||+.+|++|+||||+++||+-|+..+.+.|.++.+..+ .+|+.++|+-+|+..++|+|++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999999988877554 55666899999999999999999994
No 64
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-40 Score=376.79 Aligned_cols=212 Identities=34% Similarity=0.489 Sum_probs=184.6
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc--cccceEEEecCCCCCCCCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1286)
.+.+|+||||.+++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 357999999999999999999999999999999999999998 99999999887652 3357899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+|||.|.+++.+.... ....+++++++.+||++.++ ..+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~-----~~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKAN-----KKV 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhC-----cch
Confidence 999999999988764210 01235788999999998444 345
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
++||+||||||+||.||+++|++|||||||+|||+.++.++.+.|++++.. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999998763 4355666788889999999999999999
Q ss_pred eEEEEcChhHHHHHHHh
Q 000787 402 QIVYQGPRELVLEFFAS 418 (1286)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1286)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998776544
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.6e-40 Score=347.10 Aligned_cols=209 Identities=27% Similarity=0.389 Sum_probs=178.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1286)
..||+|||++|++||+++|+|||||||||||++|.|+++|+ +|+|.++|.++.+... ++.+|+++|+-.+|
T Consensus 21 ~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALF 97 (263)
T COG1127 21 RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALF 97 (263)
T ss_pred EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccc
Confidence 45999999999999999999999999999999999999999 9999999999876543 46799999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
..+||+||+.|..+-... + | ....+..+..-|+..||... +++
T Consensus 98 ssltV~eNVafplre~~~---------l----------p--------------~~~i~~lv~~KL~~VGL~~~----~~~ 140 (263)
T COG1127 98 SSLTVFENVAFPLREHTK---------L----------P--------------ESLIRELVLMKLELVGLRGA----AAD 140 (263)
T ss_pred cccchhHhhheehHhhcc---------C----------C--------------HHHHHHHHHHHHHhcCCChh----hhh
Confidence 999999999997643211 0 0 01112234445778899754 345
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
.++.+||||++||+++|||++.+|+++|+||||+||||.++..+.+.++++.+.. +.+++.++|+.++++..+|+|++|
T Consensus 141 ~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv~~L 219 (263)
T COG1127 141 LYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRVAVL 219 (263)
T ss_pred hCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceEEEE
Confidence 6788899999999999999999999999999999999999999999999987655 455556889999999999999999
Q ss_pred cCCeEEEEcChhHHHH
Q 000787 399 SDGQIVYQGPRELVLE 414 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1286)
.+|+|+.+|+++++.+
T Consensus 220 ~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 220 ADGKVIAEGTPEELLA 235 (263)
T ss_pred eCCEEEEeCCHHHHHh
Confidence 9999999999999864
No 66
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=360.35 Aligned_cols=223 Identities=30% Similarity=0.452 Sum_probs=188.8
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCc---cCCCccc-cceEEEecCCCCCCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH---DMDEFVP-QRTAAYISQHDNHIG 239 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 239 (1286)
...+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|+|.+||. +.++... .|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 355899999999999999999999999999999999999999 999999999 6655433 388999999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.|||.+||+|+.+++... | ...+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~~-------------------p-------------~~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKER-------------------P-------------SEAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhcccccccC-------------------C-------------ChhhHHHHHHHHHHHhcccchhh-----c
Confidence 999999999999775210 0 01123456788899999987655 6
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
++.+|||||||||++||||+..|++|+||||+++||...+..+-+.|+++.... +.+.+.++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEec
Confidence 678899999999999999999999999999999999999999999999875543 4555568999999999999999999
Q ss_pred CCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHh
Q 000787 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~ 435 (1286)
+|+|...||++++. .-|...-++.|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999984 34555555555543
No 67
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-41 Score=361.55 Aligned_cols=205 Identities=29% Similarity=0.448 Sum_probs=186.0
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc---cCCh-hcccceEEEeccCCCCCCC
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSPF 955 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~~ 955 (1286)
...+++|||+.|+.||++||+|||||||||||++|||..+ +..|.|.+||. +.++ ....|.+|||+|+..+++.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999987 56899999998 5444 3345789999999999999
Q ss_pred CCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000787 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1286)
Q Consensus 956 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPT 1035 (1286)
|||.+|+.|+...+ ...++..+.+.+|+++|+.+.|.++.+.. +.+|||||||||++||||+.+|++|+||||+
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998776 34456778889999999999999999987 4689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1036 sgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
++||+.-+..+.+.|+++.+. |.|+|++|||+. ++.+.+||+++|++ |++.-.||+.
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999876 999999999997 79999999999996 7999999873
No 68
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-41 Score=339.83 Aligned_cols=200 Identities=28% Similarity=0.369 Sum_probs=184.1
Q ss_pred EEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEeccCCCCCCCCCHH
Q 000787 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTIY 959 (1286)
Q Consensus 882 ~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~ 959 (1286)
++++||||.++.||++||+|+|||||||+|++|++... +.+|.|+++|.+... ...++.+|.++.+--++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999887 568999999998643 45678899999888888999999
Q ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000787 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1286)
Q Consensus 960 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD 1039 (1286)
|||.|.+.+.. ...++.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 99999998863 5667788999999999999999999975 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1040 ~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
..+...+.+.++++.+.|++||+++|..+ ++-.+||++++|++ |++++.|..
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 99999999999999988999999999986 68889999999997 799999986
No 69
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.3e-40 Score=411.50 Aligned_cols=258 Identities=27% Similarity=0.368 Sum_probs=211.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.|+.+...+|+.++++.++|.-..+. ....+....+++|+|++|.+...
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~~~~g~I~~~nvsf~y~~~-------------------------- 484 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDKT-----LIHLPKLQGEIEFENVSFRYGPD-------------------------- 484 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccc-----cccccccCceEEEEEEEEEeCCC--------------------------
Confidence 78999999999999999888211110 23334456789999999998541
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
...+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||+++++.++ |+.++||+|+
T Consensus 485 ------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 485 ------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred ------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 124999999999999999999999999999999999999998 9999999999987765 5899999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+ ++.+.||+||+.++. +....+...++++....+ + .+..++.++||
T Consensus 556 ~-~Lf~gSI~eNi~l~~----p~~~~e~i~~A~~~ag~~--------------------------~---fI~~lP~gy~t 601 (709)
T COG2274 556 P-FLFSGSIRENIALGN----PEATDEEIIEAAQLAGAH--------------------------E---FIENLPMGYDT 601 (709)
T ss_pred c-hhhcCcHHHHHhcCC----CCCCHHHHHHHHHHhCcH--------------------------H---HHHhccccccc
Confidence 6 555679999999875 233334444444332211 1 14568999999
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.++..|.+.|.++. .++|+|+..| +..+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaH--Rl~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAH--RLSTIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEc--cchHhhhccE
Confidence 9998765 799999999999999999999999999999999999999999999864 3566666543 4678999999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|+||++|+|+.+|+++++++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999986
No 70
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-40 Score=354.73 Aligned_cols=223 Identities=27% Similarity=0.427 Sum_probs=187.0
Q ss_pred eEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHH
Q 000787 117 VEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLL 196 (1286)
Q Consensus 117 ~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~ 196 (1286)
..|+++||+|.++. + ++|+|||+.+++|++++|+||||||||||+|
T Consensus 3 ~~i~v~nl~v~y~~---------------------------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK 48 (254)
T COG1121 3 PMIEVENLTVSYGN---------------------------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLK 48 (254)
T ss_pred cEEEEeeeEEEECC---------------------------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHH
Confidence 46889999999842 1 3999999999999999999999999999999
Q ss_pred HHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCC--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcC
Q 000787 197 ALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAG 274 (1286)
Q Consensus 197 ~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1286)
+|+|+++|. +|+|.++|.+..+...+..||||||.. .+-..+||+|.+..+..-+. + .....
T Consensus 49 ~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~-g----~~~~~-------- 112 (254)
T COG1121 49 AILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKK-G----WFRRL-------- 112 (254)
T ss_pred HHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccc-c----ccccc--------
Confidence 999999998 999999999887776678999999953 33344899999988732110 0 00000
Q ss_pred CCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCC
Q 000787 275 IKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGL 354 (1286)
Q Consensus 275 ~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgL 354 (1286)
..+.+..+++.|+.+|+.+.+|..+|+ |||||+|||-|||||+++|++|+|||||+|+
T Consensus 113 -----------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~-----LSGGQ~QRV~lARAL~~~p~lllLDEP~~gv 170 (254)
T COG1121 113 -----------------NKKDKEKVDEALERVGMEDLRDRQIGE-----LSGGQKQRVLLARALAQNPDLLLLDEPFTGV 170 (254)
T ss_pred -----------------cHHHHHHHHHHHHHcCchhhhCCcccc-----cCcHHHHHHHHHHHhccCCCEEEecCCcccC
Confidence 111235688899999999999988875 9999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHH
Q 000787 355 DSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 355 D~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
|+.++..|++.|+++.+. +.+|+.++|+...+.++||+|+.|++ ++++.|+++++.+
T Consensus 171 D~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~~ 227 (254)
T COG1121 171 DVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVLT 227 (254)
T ss_pred CHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhccC
Confidence 999999999999998754 55566689999999999999999986 6889999998753
No 71
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-40 Score=337.31 Aligned_cols=220 Identities=25% Similarity=0.388 Sum_probs=178.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|||+.|+++++||++|||||||||||++|.+..+. ..+++|+|.++|+++-+. ..|+.+|+|+|.+.-|
T Consensus 21 ~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPF 100 (253)
T COG1117 21 HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPF 100 (253)
T ss_pred hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCC
Confidence 499999999999999999999999999999999988653 468899999999997543 2368999999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-ccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMVG 317 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 317 (1286)
| +||+||+.|+.++.|... +.+. .+++..|+.-+|.+ ..|.+
T Consensus 101 p-~SIydNVayG~r~~g~~~--~~ld--------------------------------eiVe~sLk~AaLWdEVKDrL-- 143 (253)
T COG1117 101 P-MSIYDNVAYGLRLHGIKD--KELD--------------------------------EIVESSLKKAALWDEVKDRL-- 143 (253)
T ss_pred C-chHHHHHHHhHHhhccch--HHHH--------------------------------HHHHHHHHHhHhHHHhHHHh--
Confidence 9 999999999999887532 2222 23333444444432 22222
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
++...+|||||+||++|||||+-+|+||+||||||+|||.++..|-+.+.++. ..-+||.++|.+..+.+..|+...
T Consensus 144 ~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~taF 220 (253)
T COG1117 144 HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYTAF 220 (253)
T ss_pred hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhhhh
Confidence 12234799999999999999999999999999999999999999999999874 244555588999999999999999
Q ss_pred ecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHH
Q 000787 398 LSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1286)
Q Consensus 398 L~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1286)
+..|++|++|+.+++ |..|..+...||+
T Consensus 221 f~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 221 FYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 999999999999987 4456666666665
No 72
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-40 Score=370.08 Aligned_cols=215 Identities=28% Similarity=0.390 Sum_probs=192.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|++..+. ...+|+|||++|+.||.++|+|||||||||||++|||... +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467788876663 1229999999999999999999999999999999999876 5789999999987
Q ss_pred Ch-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
+. ...+|.+++|+|+..++|.+||+||+.|+..++. .++++.+++|+++.+.|+|.++.++. +++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 65 3456889999999999999999999999977653 46788899999999999999999987 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. |.+.++||+.+|+ +|++.-.|.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999975 7899999999999 589999998
Q ss_pred CC
Q 000787 1093 LG 1094 (1286)
Q Consensus 1093 ~~ 1094 (1286)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 73
No 73
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=340.47 Aligned_cols=215 Identities=26% Similarity=0.383 Sum_probs=179.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1286)
+++|+|||+.|++|||++|+|||||||||||++|.|+.+|+ +|+|.+||.++..... ++.+||++|+..+.
T Consensus 17 ~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv 93 (258)
T COG3638 17 HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLV 93 (258)
T ss_pred ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcc
Confidence 45999999999999999999999999999999999999998 9999999988765542 46899999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+.+||.+|+..+..-.. ... ..-.++.+ ++.+..+-+.|+.+|+.+.+-+..+
T Consensus 94 ~r~sv~~NVl~grl~~~--s~~---------~slfglfs---------------k~dk~~Al~aLervgi~~~A~qra~- 146 (258)
T COG3638 94 PRLSVLENVLLGRLGYT--STW---------RSLFGLFS---------------KEDKAQALDALERVGILDKAYQRAS- 146 (258)
T ss_pred cccHHHHHHHhhhcccc--hHH---------HHHhCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHhc-
Confidence 99999999998753221 110 01112211 1223345567999999988887765
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
.|||||+|||+|||||+.+|++++-|||+++|||.++.++++.|+++....+.|+|+ .+|..+-+.++||||+-|
T Consensus 147 ----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~Riigl 221 (258)
T COG3638 147 ----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYADRIIGL 221 (258)
T ss_pred ----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHhhheEe
Confidence 599999999999999999999999999999999999999999999998766556555 556788999999999999
Q ss_pred cCCeEEEEcChhHHHH
Q 000787 399 SDGQIVYQGPRELVLE 414 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1286)
++|+|+|.||++++-+
T Consensus 222 ~~G~ivfDg~~~el~~ 237 (258)
T COG3638 222 KAGRIVFDGPASELTD 237 (258)
T ss_pred cCCcEEEeCChhhhhH
Confidence 9999999999988654
No 74
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-40 Score=372.65 Aligned_cols=216 Identities=26% Similarity=0.387 Sum_probs=193.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|++-.+. +..+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888876663 4679999999999999999999999999999999999887 5689999999987
Q ss_pred Ch-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
.. ...+|.+|+|+|+-.+||+|||+||+.|+..++ ....+++.+++|+++++.++|.++.+.. +.+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 65 345788999999999999999999999997633 3345677888999999999999999887 467999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+.+|++|+||||.|+||..-+..+..-|+++.++ |.|.|++|||.. +.+.++|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998755 999999999986 68899999999985 79998888
Q ss_pred CC
Q 000787 1093 LG 1094 (1286)
Q Consensus 1093 ~~ 1094 (1286)
+.
T Consensus 221 P~ 222 (352)
T COG3842 221 PE 222 (352)
T ss_pred HH
Confidence 73
No 75
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=9.1e-40 Score=330.06 Aligned_cols=213 Identities=25% Similarity=0.327 Sum_probs=184.1
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.|+||+-.|+. .+++|+||||+|++||++-|+|||||||||||++|.+... +..|.|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 567888766642 3569999999999999999999999999999999999766 56899999999864
Q ss_pred h------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
. .-++|.+|+|+||..+.+..||+||+.|...... .+..+.+++|.++|+.+||.+.++.. +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 2367899999999999999999999999866553 35567788899999999999988876 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||||++||||++.+|++|+.||||.+||+..+..||+++.++...|.|||+.||+.+. +-..-.+++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999899999999999642 3344468888885 78887
Q ss_pred eCC
Q 000787 1090 VGP 1092 (1286)
Q Consensus 1090 ~G~ 1092 (1286)
...
T Consensus 218 d~~ 220 (223)
T COG2884 218 DES 220 (223)
T ss_pred ccc
Confidence 654
No 76
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.9e-39 Score=369.43 Aligned_cols=215 Identities=27% Similarity=0.405 Sum_probs=188.3
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..+.++|++..+. ++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEe
Confidence 3588899988763 2469999999999999999999999999999999999876 468999999988
Q ss_pred CCh--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
... ...++.+|||+|++.+++.+||+|++.|.+.++. .+.++..++++++++.++|.+..++.+ ++||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 643 2356789999999999999999999998765542 233444567889999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g 220 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEG 220 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999878999999999997 58889999999986 7999999
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
+.
T Consensus 221 ~~ 222 (306)
T PRK13537 221 AP 222 (306)
T ss_pred CH
Confidence 85
No 77
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=331.76 Aligned_cols=206 Identities=32% Similarity=0.377 Sum_probs=182.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1286)
..+++||||.++.|++++|+|||||||||+|++|++++.|+ +|+|++||.+..+.+ .++.+|.++.+..++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 34899999999999999999999999999999999999999 999999999875432 3588999998888999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
++|||.|.+++.+.. ..+.+.+++++.+.|+|.+|.|+.+|+
T Consensus 92 ~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~---- 133 (245)
T COG4555 92 ARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE---- 133 (245)
T ss_pred HHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh----
Confidence 999999988775432 122345788899999999999999885
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
+|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++. ..+.+|+..+|..+|+..+||+|++|++|+
T Consensus 134 -~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 134 -FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred -hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 99999999999999999999999999999999999999999999863 345666668899999999999999999999
Q ss_pred EEEEcChhHHHH
Q 000787 403 IVYQGPRELVLE 414 (1286)
Q Consensus 403 iv~~G~~~~~~~ 414 (1286)
+|+.|+.+.+.+
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999988754
No 78
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=333.33 Aligned_cols=217 Identities=23% Similarity=0.320 Sum_probs=187.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCC---CCceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 931 (1286)
.++.+|++.+|. .+.+|+|||+.|++++++||||||||||||||++|.... ++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 578889988873 467999999999999999999999999999999999753 3446889999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGV 1005 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~ 1005 (1286)
.++.. ..+|+.+|.|+|.+.-|| +|++||+.|+.++....+ ++.++.|++.|+...|.+- +|.+ ... .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL-~~s-a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRL-HKS-A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHh-hCC-c
Confidence 87643 357889999999999999 999999999987765432 6778889999999998754 4443 222 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
.+|||||+|||||||+|+.+|+||+||||||+|||.+...|-+++.++. +.-|||++||.+. +.....|+..++.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5799999999999999999999999999999999999999999999997 4699999999986 57788899999986 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
+++.+|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999996
No 79
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.7e-39 Score=343.67 Aligned_cols=196 Identities=30% Similarity=0.451 Sum_probs=166.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1286)
..+|+++|+.|++||+++|+|||||||||||++|.|+..|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999998876542 3679999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
+|++||+||+.+...+.+...+ ......+.+++.+||.+..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999988766543211 11234677889999986655
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
+..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.|+++.+.. +++|+.++|+ +++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd-~~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHD-PELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCC-HHHHHhCCEEEE
Confidence 13345799999999999999999999999999999999999999999999987644 4455556665 578889999999
Q ss_pred ecCCeE
Q 000787 398 LSDGQI 403 (1286)
Q Consensus 398 L~~G~i 403 (1286)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 80
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.9e-39 Score=371.10 Aligned_cols=229 Identities=24% Similarity=0.362 Sum_probs=193.9
Q ss_pred cCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCC
Q 000787 110 VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSS 189 (1286)
Q Consensus 110 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 189 (1286)
..+..|..+|+|+||++++.+ +.+||+++||+|++|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~~---------------------------------k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYGP---------------------------------KRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeCC---------------------------------CCceecceeEEecCCCEEEEECCCCC
Confidence 567778889999999999842 22399999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHH
Q 000787 190 GKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTEL 266 (1286)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1286)
||||+|++|.++++ . +|+|.+||.++++..+ |+.||||||+. ++++-||.+||.|+. +...++...++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~-~LFndTIl~NI~YGn----~sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDS-VLFNDTILYNIKYGN----PSASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcc-cccchhHHHHhhcCC----CCcCHHHHHHH
Confidence 99999999999998 5 8999999999987654 57899999955 555679999999985 33455666666
Q ss_pred HHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccce
Q 000787 267 ARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALF 346 (1286)
Q Consensus 267 ~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vll 346 (1286)
|++...++ -+..|+++++|.||+++.+ |||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~hd-----------------------------~i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGLHD-----------------------------VISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCcHH-----------------------------HHHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 66543211 1456899999999999876 99999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHH
Q 000787 347 MDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 347 LDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|||||+||+.|...|++.+... ..++|+|+.+ |. ..+..-||+|++|++|++...|+++|++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~Iv-H~-l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMIV-HR-LDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEEE-ec-chhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 2456666655 43 46788899999999999999999999976
No 81
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-39 Score=405.09 Aligned_cols=258 Identities=23% Similarity=0.377 Sum_probs=212.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCC--CCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI--DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1286)
...++....++++++|..+. +... +..+. +.-..+|+|+||+|.|..
T Consensus 951 ~~ka~~Aa~~iF~i~dr~~~-----i~~~-~~~~~~~~~~~G~I~~~~V~F~YPs------------------------- 999 (1228)
T KOG0055|consen 951 ISKAKIAAGSIFEILDRKPT-----IDPD-STSGGKLPNVKGDIEFRNVSFAYPT------------------------- 999 (1228)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----CCCC-CCCCCccccceeEEEEeeeEeeCCC-------------------------
Confidence 44677788888888887764 2111 12342 233567999999999842
Q ss_pred hhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEec
Q 000787 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1286)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1286)
+ +..+||+|+|+++++|+.+||+|||||||||...+|-++|+|+ +|.|.+||+++++++. |+++|.|+
T Consensus 1000 -----R-P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVs 1070 (1228)
T KOG0055|consen 1000 -----R-PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVS 1070 (1228)
T ss_pred -----C-CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceec
Confidence 2 4567999999999999999999999999999999999999998 9999999999998876 48899999
Q ss_pred CCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000787 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1286)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1286)
|+|.+|. .|+||||.|+.. . ...+.+.++++....+++ +.+|++++
T Consensus 1071 QEP~LF~-~TIrENI~YG~~--~--vs~~eIi~Aak~ANaH~F-----------------------------I~sLP~Gy 1116 (1228)
T KOG0055|consen 1071 QEPVLFN-GTIRENIAYGSE--E--VSEEEIIEAAKLANAHNF-----------------------------ISSLPQGY 1116 (1228)
T ss_pred cCchhhc-ccHHHHHhccCC--C--CCHHHHHHHHHHhhhHHH-----------------------------HhcCcCcc
Confidence 9997775 699999999821 1 234455555554433222 56899999
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000787 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1286)
Q Consensus 313 dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1286)
||.||+++. +||||||||++||||+++||+||||||.||+||+.+..-+.+.|.+.. .++|+|+.. |+..+.+.+
T Consensus 1117 DT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIA--HRLSTIqna 1191 (1228)
T KOG0055|consen 1117 DTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIA--HRLSTIQNA 1191 (1228)
T ss_pred cCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEe--cchhhhhcC
Confidence 999999887 599999999999999999999999999999999999999999999854 455665544 467899999
Q ss_pred CcEEEecCCeEEEEcChhHHHH
Q 000787 393 DDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
|.|+|+++|+|+++|+|+++++
T Consensus 1192 D~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1192 DVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred CEEEEEECCEEEecccHHHHHh
Confidence 9999999999999999999976
No 82
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.6e-38 Score=366.92 Aligned_cols=206 Identities=24% Similarity=0.351 Sum_probs=177.3
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1286)
.++|+|||+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 45999999999999999999999999999999999999998 9999999998876532 46799999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+.+||+||+.|+....+... .+...++.++++.+||.+..|..
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~--- 137 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSY--- 137 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC---
Confidence 99999999998765432110 01123467789999998877655
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+..|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.+..+ .+|+.++|+.+.+.++||+|++|
T Consensus 138 --~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 138 --PSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999865334 45555888899999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.9e-38 Score=369.14 Aligned_cols=206 Identities=28% Similarity=0.405 Sum_probs=178.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+||++||+
T Consensus 18 ~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (353)
T TIGR03265 18 TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVA 94 (353)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHH
Confidence 4899999999999999999999999999999999999998 9999999998865444 47899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+.+.++... .+....++++++.+||++..|.. +..|
T Consensus 95 eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~-----~~~L 135 (353)
T TIGR03265 95 DNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKY-----PGQL 135 (353)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCC-----hhhC
Confidence 99999865432110 01123567889999999877654 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~ 214 (353)
T TIGR03265 136 SGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVIE 214 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 455566788999999999999999999999
Q ss_pred EEcChhHHHH
Q 000787 405 YQGPRELVLE 414 (1286)
Q Consensus 405 ~~G~~~~~~~ 414 (1286)
+.|+++++.+
T Consensus 215 ~~g~~~~~~~ 224 (353)
T TIGR03265 215 QVGTPQEIYR 224 (353)
T ss_pred EEcCHHHHHh
Confidence 9999998753
No 84
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-38 Score=352.21 Aligned_cols=213 Identities=24% Similarity=0.352 Sum_probs=181.4
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5678877763 2469999999999999999999999999999999999876 468999999987532
Q ss_pred ------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
..+++.++||+|++.+++.+||+|++.+...... ..+.++..++++++++.++|.+..+..+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2345679999999988899999999988643221 2234445567889999999988776653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999874 899999999987 47788999999985 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 9875
No 85
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.6e-38 Score=366.83 Aligned_cols=217 Identities=23% Similarity=0.303 Sum_probs=187.1
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++.. .....+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5788888777421 012469999999999999999999999999999999999876 46899999998764
Q ss_pred hh------cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
.. ..++.+||++|+..+++..||+||+.|..... ..+.++.++++.++++.+||.+..+..+ ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999999875433 2345566678999999999998888763 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 999999999986 47788999999985 7999
Q ss_pred EeCCC
Q 000787 1089 YVGPL 1093 (1286)
Q Consensus 1089 y~G~~ 1093 (1286)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99986
No 86
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-38 Score=367.82 Aligned_cols=205 Identities=24% Similarity=0.382 Sum_probs=178.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
.+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..++|++||+
T Consensus 20 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~ 96 (351)
T PRK11432 20 TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLG 96 (351)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999999876554 37899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+.+.++... .+....++++++.+||.+..+.. +..|
T Consensus 97 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~L 137 (351)
T PRK11432 97 ENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQI 137 (351)
T ss_pred HHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999875432211 01123567789999998766544 5579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+. .+++++.++|+..++.+++|+|++|++|+++
T Consensus 138 SgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~e~~~laD~i~vm~~G~i~ 216 (351)
T PRK11432 138 SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ-FNITSLYVTHDQSEAFAVSDTVIVMNKGKIM 216 (351)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987653 3455666889999999999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
..|+++++.
T Consensus 217 ~~g~~~~~~ 225 (351)
T PRK11432 217 QIGSPQELY 225 (351)
T ss_pred EEcCHHHHH
Confidence 999999874
No 87
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=369.01 Aligned_cols=205 Identities=25% Similarity=0.364 Sum_probs=177.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.++|++||+
T Consensus 18 ~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (356)
T PRK11650 18 QVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVR 94 (356)
T ss_pred EEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999999876544 37899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+.+..+... .+....++++++.+||++..+.. ++.|
T Consensus 95 eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 135 (356)
T PRK11650 95 ENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRK-----PREL 135 (356)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCC-----hhhC
Confidence 99999875432110 01123467789999998777654 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~ 214 (356)
T PRK11650 136 SGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGGVAE 214 (356)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999987653 3455666888999999999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
..|+++++.
T Consensus 215 ~~g~~~~~~ 223 (356)
T PRK11650 215 QIGTPVEVY 223 (356)
T ss_pred EECCHHHHH
Confidence 999999874
No 88
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.2e-38 Score=368.16 Aligned_cols=206 Identities=23% Similarity=0.347 Sum_probs=178.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCce--eEEEEcCccCCCccc-cceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVS--GTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+++.+|
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~t 95 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLK 95 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCc
Confidence 4999999999999999999999999999999999999998 8 999999998865544 467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+|||.|+.+..+... .+....++++++.+||++..|..+ +
T Consensus 96 v~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~-----~ 136 (362)
T TIGR03258 96 VEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP-----A 136 (362)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----h
Confidence 9999999875432110 011234678899999988777554 5
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|+
T Consensus 137 ~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 137 QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999987653324566668899999999999999999999
Q ss_pred EEEEcChhHHH
Q 000787 403 IVYQGPRELVL 413 (1286)
Q Consensus 403 iv~~G~~~~~~ 413 (1286)
++..|+++++.
T Consensus 217 i~~~g~~~~~~ 227 (362)
T TIGR03258 217 LAAHGEPQALY 227 (362)
T ss_pred EEEEcCHHHHH
Confidence 99999999874
No 89
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.7e-38 Score=368.26 Aligned_cols=215 Identities=25% Similarity=0.359 Sum_probs=189.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|++..++ .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 378889988763 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Ch-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+.++.+++++++++.++|.++.+.. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 224577999999999999999999999986543 234566677899999999999988876 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 999999999997 68899999999996 79999998
Q ss_pred CC
Q 000787 1093 LG 1094 (1286)
Q Consensus 1093 ~~ 1094 (1286)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 63
No 90
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-38 Score=368.74 Aligned_cols=215 Identities=25% Similarity=0.359 Sum_probs=187.7
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|++..++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888887762 12469999999999999999999999999999999999876 46899999998764
Q ss_pred h-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 936 Q-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 936 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
. ...++.+|||+|++.++|.+||+||+.|+...+ ..+.++.+++++++++.++|.++.+..+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 3 123468999999999999999999999986433 2345566678999999999998888764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++|||+. ++.+++|++++|++ |+++..|++
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 999999999986 68899999999985 899999986
Q ss_pred C
Q 000787 1094 G 1094 (1286)
Q Consensus 1094 ~ 1094 (1286)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 3
No 91
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=8e-38 Score=360.06 Aligned_cols=205 Identities=27% Similarity=0.406 Sum_probs=177.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1286)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+||
T Consensus 21 ~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 97 (306)
T PRK13537 21 LVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTV 97 (306)
T ss_pred EEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.|.+++.+.... +...+++++++.+||.+.+++.++ +
T Consensus 98 ~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 138 (306)
T PRK13537 98 RENLLVFGRYFGLSAA----------------------------------AARALVPPLLEFAKLENKADAKVG-----E 138 (306)
T ss_pred HHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHcCCchHhcCchh-----h
Confidence 9999986654432100 011245678899999988887764 6
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|...++.++||+|++|++|++
T Consensus 139 LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~i 216 (306)
T PRK13537 139 LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGRK 216 (306)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 45566678899999999999999999999
Q ss_pred EEEcChhHHHH
Q 000787 404 VYQGPRELVLE 414 (1286)
Q Consensus 404 v~~G~~~~~~~ 414 (1286)
++.|+++++.+
T Consensus 217 ~~~g~~~~l~~ 227 (306)
T PRK13537 217 IAEGAPHALIE 227 (306)
T ss_pred EEECCHHHHHh
Confidence 99999998864
No 92
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=8e-38 Score=367.04 Aligned_cols=217 Identities=28% Similarity=0.383 Sum_probs=183.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|+.+++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.++|.+||+
T Consensus 28 ~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 104 (375)
T PRK09452 28 EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVF 104 (375)
T ss_pred EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998866544 47799999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
|||.|+.+..+... .+....++++++.+||++..+.. +..|
T Consensus 105 eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----p~~L 145 (375)
T PRK09452 105 ENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRK-----PHQL 145 (375)
T ss_pred HHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 99999865432110 01123467789999998877655 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 146 SgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~ 224 (375)
T PRK09452 146 SGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIE 224 (375)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999886543 455666889999999999999999999999
Q ss_pred EEcChhHHHHHHHhCCCCCCCCCChHHHH
Q 000787 405 YQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1286)
Q Consensus 405 ~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1286)
..|+++++.+ .|....+++|+
T Consensus 225 ~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 225 QDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEcCHHHHHh--------CcccHHHHHhc
Confidence 9999988743 35444455544
No 93
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=362.67 Aligned_cols=257 Identities=20% Similarity=0.338 Sum_probs=214.7
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.|..-.-+|++++++++++| +.+......+..++..|+|+||++.+++
T Consensus 502 iQ~nfiDmEnmfdllkee~e-----Vvd~P~a~pl~~~~G~i~fsnvtF~Y~p--------------------------- 549 (790)
T KOG0056|consen 502 IQKNFIDMENMFDLLKEEPE-----VVDLPGAPPLKVTQGKIEFSNVTFAYDP--------------------------- 549 (790)
T ss_pred HHHhhhhHHHHHHHhhcCch-----hhcCCCCCCccccCCeEEEEEeEEecCC---------------------------
Confidence 45555667888999998888 7887777888889999999999999864
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc---cccceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF---VPQRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~ 234 (1286)
.+++|+||||++.||+.+||+||||+||||+|++|.++++.+ +|.|++||++++.. ..++.||.||||
T Consensus 550 ------~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQD 620 (790)
T KOG0056|consen 550 ------GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQD 620 (790)
T ss_pred ------CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCc
Confidence 245999999999999999999999999999999999999988 99999999998654 346789999996
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
..+| +-|+..||.|+. ++...|...++++... ---++++++++++|
T Consensus 621 tvLF-NdTI~yNIryak----~~AsneevyaAAkAA~-----------------------------IHdrIl~fPegY~t 666 (790)
T KOG0056|consen 621 TVLF-NDTILYNIRYAK----PSASNEEVYAAAKAAQ-----------------------------IHDRILQFPEGYNT 666 (790)
T ss_pred ceee-cceeeeheeecC----CCCChHHHHHHHHHhh-----------------------------HHHHHhcCchhhhh
Confidence 6555 569999999874 3333333333322211 11247899999999
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.||+++.+ |||||||||+|||+++..|.+++|||.||+||..+..+|..+|.+++. ++|+|+.. |+.++.-.+|.
T Consensus 667 ~VGERGLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ 741 (790)
T KOG0056|consen 667 RVGERGLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADL 741 (790)
T ss_pred hhhhcccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccE
Confidence 99999997 999999999999999999999999999999999999999999999874 45555543 35667778999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|+++++|+|++.|.++|++.
T Consensus 742 ILvi~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLK 761 (790)
T ss_pred EEEEeCCeEeecCcHHHHHh
Confidence 99999999999999999875
No 94
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-38 Score=365.33 Aligned_cols=215 Identities=24% Similarity=0.373 Sum_probs=189.5
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 578899988763 2468999999999999999999999999999999999876 4689999999876
Q ss_pred Chh-cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
... ..+|.+|||+|+..++|.+||+||+.|+...+. .+.++.+++++++++.++|.++.+.. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 234779999999999999999999999865432 34566678899999999999888776 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++|||++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999997 68899999999996 79999998
Q ss_pred CC
Q 000787 1093 LG 1094 (1286)
Q Consensus 1093 ~~ 1094 (1286)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 95
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1e-37 Score=362.68 Aligned_cols=215 Identities=27% Similarity=0.378 Sum_probs=187.6
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++++|++..++ ++.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3588999988773 3569999999999999999999999999999999999876 468999999987
Q ss_pred CCh--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
... ...++.+|||+|++.+++.+||+|++.|.+.++. .+..+..++++++++.++|.+..++.+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2346679999999999999999999997665442 233444556788999999998888774 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||||++||++|+++|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999987 68889999999986 7999999
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 96
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9.4e-38 Score=365.21 Aligned_cols=215 Identities=24% Similarity=0.331 Sum_probs=188.5
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEE--EEEEEcCc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNITISGY 932 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~--G~i~i~g~ 932 (1286)
.++++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 478889988773 2469999999999999999999999999999999999876 457 99999998
Q ss_pred cCCh-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 933 PKKQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 933 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
+... ...++.+|||+|+..++|.+||+||+.|+...+ ..+.++.+++++++++.++|.++.++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 223567999999999999999999999986443 2345566778999999999999888774 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~--g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999987 58889999999985 79999
Q ss_pred eCCCC
Q 000787 1090 VGPLG 1094 (1286)
Q Consensus 1090 ~G~~~ 1094 (1286)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99863
No 97
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-38 Score=342.43 Aligned_cols=210 Identities=28% Similarity=0.402 Sum_probs=177.4
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677777663 2469999999999999999999999999999999999875 468999999987643
Q ss_pred -hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000787 937 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 937 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
...++.++|++|++.+++.+|++|++.+..... ....+..++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 123457999999998888899999998865332 1233444567889999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
++||++|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999976 4899999999986 47788999999986 6887765
No 98
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-38 Score=344.24 Aligned_cols=214 Identities=23% Similarity=0.334 Sum_probs=189.1
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.+++++|+++. +..+|+|+|+.|++|+.++|+|+||||||||+++|+|... +.+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 678899998852 2479999999999999999999999999999999999877 45799999998854
Q ss_pred ----hhcccceEEEeccCCCCC-CCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 936 ----QETFARISGYCEQNDIHS-PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ----~~~~~~~~gyv~Q~~~~~-~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
...+++.+|||+|++... ..-||.|.+.|+..-. ..+.++.+++++++++.+++.++++.. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 345788999999998654 4579999999986432 455667889999999999999998876 467999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |.|||+++||.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 699999999987 58888999999996 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 99
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.7e-35 Score=395.81 Aligned_cols=216 Identities=22% Similarity=0.358 Sum_probs=187.9
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++++|++..++. +++.+|+|||+.+.+||+++|+|+|||||||||++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46889999887731 23569999999999999999999999999999999999876 468999999987
Q ss_pred CCh--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.+++++++++.++|.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999876653 233445567899999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|||||+||+||+.+|+||||||||+|||+.+++.+++.|+++. +|+|||+|||+++ ++..++||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57778999999986 7999999
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 100
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-38 Score=330.30 Aligned_cols=205 Identities=27% Similarity=0.333 Sum_probs=177.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc----ccceEEEecCCC--CCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHD--NHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 239 (1286)
++|+|||+++.+||..+|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+-+|+||+ .+.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999998 999999998765542 347899999996 5789
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
..||++.|.-+.+..+.+. ...++.++|+.+||+... -++
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~----l~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSF----LDR 137 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHH----Hhc
Confidence 9999999987654432211 112366789999998532 346
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
.+.+|||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+ ..+.+++.++|+..-+..+||||+||+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeeee
Confidence 6778999999999999999999999999999999999999999999998765 456677779999999999999999999
Q ss_pred CCeEEEEcChhHHHH
Q 000787 400 DGQIVYQGPRELVLE 414 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1286)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 101
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-38 Score=342.51 Aligned_cols=207 Identities=29% Similarity=0.420 Sum_probs=180.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCC----CccccceEEEecCCC-CCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----EFVPQRTAAYISQHD-NHIG 239 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1286)
..+|+|+|+.+++|+.++|+||||||||||+++|+|++.|+ +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 45999999999999999999999999999999999999998 899999999865 233468899999996 4577
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.-||.|.++|+.+..+... ++...+++.+++.+||.+.++.
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r----- 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDR----- 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccC-----
Confidence 8899999999987665421 1133567889999999988764
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
.+..|||||||||+||.+|+.+|++|+|||||+|||+..+.++++.++++.. .++.+||.++|+...+..++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999999865 444556668899999999999999999
Q ss_pred CCeEEEEcChhHHHH
Q 000787 400 DGQIVYQGPRELVLE 414 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1286)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 102
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=345.04 Aligned_cols=206 Identities=30% Similarity=0.390 Sum_probs=171.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.+++
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4999999999999999999999999999999999999998 999999999875532 2457999999998999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.++..... +... .+....++.+++.+||++..++.+
T Consensus 91 ~~tv~~~l~~~~~~~~-~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (235)
T cd03261 91 SLTVFENVAFPLREHT-RLSE--------------------------------EEIREIVLEKLEAVGLRGAEDLYP--- 134 (235)
T ss_pred CCcHHHHHHHHHhhcc-CCCH--------------------------------HHHHHHHHHHHHHcCCchhhcCCh---
Confidence 9999999988643210 0000 001124566788999987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.+++|+|++|+
T Consensus 135 --~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l~ 211 (235)
T cd03261 135 --AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVLY 211 (235)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876432 4455567888889999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (235)
T cd03261 212 DGKIVAEGTPEELR 225 (235)
T ss_pred CCeEEEecCHHHHc
Confidence 99999999988753
No 103
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2e-37 Score=361.98 Aligned_cols=209 Identities=28% Similarity=0.390 Sum_probs=177.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|+++|+++....+ ++.++||+|++.+++.+||+
T Consensus 16 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 16 QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998865443 36799999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+.+........ ...+....++++++.+||++..|.. +..|
T Consensus 93 eni~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~L 137 (353)
T PRK10851 93 DNIAFGLTVLPRRERP------------------------------NAAAIKAKVTQLLEMVQLAHLADRY-----PAQL 137 (353)
T ss_pred HHHHhhhhhcccccCC------------------------------CHHHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 9999986432100000 0001123567789999998776654 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+.+++.++|+..++..++|+|++|++|+++
T Consensus 138 SgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~ 216 (353)
T PRK10851 138 SGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNIE 216 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765 33455666889999999999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
+.|+++++.
T Consensus 217 ~~g~~~~i~ 225 (353)
T PRK10851 217 QAGTPDQVW 225 (353)
T ss_pred EEcCHHHHH
Confidence 999999874
No 104
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.1e-38 Score=317.40 Aligned_cols=200 Identities=27% Similarity=0.397 Sum_probs=174.7
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1286)
..+|+|||+.|++||++-|+||||||||||||+|.+...|+ +|+|.+||+++..... +|.||+|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 44999999999999999999999999999999999999998 9999999999865532 58999999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+..||.||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999988765422 12345678899999999887644
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+.+|||||+|||+||||++.+|++|+.||||-+||+.++..|++.+.++-+ . +|+|+..+|+..-+..+--+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~-GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-L-GTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-c-CcEEEEEeccHHHHHhccCcEEEE
Confidence 557999999999999999999999999999999999999999999998754 3 566666788888888888899999
Q ss_pred cCCeEEEEcC
Q 000787 399 SDGQIVYQGP 408 (1286)
Q Consensus 399 ~~G~iv~~G~ 408 (1286)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 105
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.7e-38 Score=393.83 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=204.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.+......||+.+++++.++ +++.... .+.+..+++|+|+++.++.
T Consensus 295 ~~~~~~a~~ri~~~l~~~~~-----~~~~~~~--~~~~~~~I~f~~vsf~y~~--------------------------- 340 (567)
T COG1132 295 LQRASAAAERLFELLDEEPE-----VEDPPDP--LKDTIGSIEFENVSFSYPG--------------------------- 340 (567)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCCCC--CCCCCCeEEEEEEEEEcCC---------------------------
Confidence 56788888999999988655 3332222 3445677999999999852
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
++++|+|+|+.++|||.+||+||||||||||+++|.|+++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 341 ------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 341 ------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred ------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 234999999999999999999999999999999999999998 9999999999887654 5789999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+|. .||+|||.++.. ....+.+.++++... ..+. +..|++++||
T Consensus 412 ~~LF~-~TI~~NI~~g~~----~at~eei~~a~k~a~---------------------------~~d~--I~~lp~g~dt 457 (567)
T COG1132 412 PLLFS-GTIRENIALGRP----DATDEEIEEALKLAN---------------------------AHEF--IANLPDGYDT 457 (567)
T ss_pred ceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhC---------------------------hHHH--HHhCcccccc
Confidence 76665 899999999852 122234444443321 1122 2345888999
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.||+++. .||||||||++||||++.+|++|+||||||+||+.+...|.+.++++. .++|+++ +.|.. .+...+|+
T Consensus 458 ~vge~G~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRl-sti~~aD~ 532 (567)
T COG1132 458 IVGERGV-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRL-STIKNADR 532 (567)
T ss_pred eecCCCc-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccH-hHHHhCCE
Confidence 9997665 599999999999999999999999999999999999999999998764 3457776 55554 45555999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|++++.|++++++.
T Consensus 533 IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 533 IIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred EEEEECCEEEEecCHHHHHH
Confidence 99999999999999999976
No 106
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=362.87 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=186.7
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887763 2469999999999999999999999999999999999876 46899999998764
Q ss_pred h-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 Q-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
. ...++.+|||+|++.++|.+||+||+.|+...+.. ...+.++.+++++++++.++|.++.+.. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 3 22346799999999999999999999997643211 1234556667899999999999888776 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++.+.+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999866 899999999997 58899999999985 79999998
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 6
No 107
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-37 Score=361.79 Aligned_cols=207 Identities=21% Similarity=0.310 Sum_probs=178.7
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1286)
+.+|+|+||+|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 45999999999999999999999999999999999999998 9999999999876543 4689999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++++||+||+.|+.+..+... .+...++.++++.+||++..++.+
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p- 127 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP- 127 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh-
Confidence 999999999999875543211 011234677899999987766554
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++..++|+|++
T Consensus 128 ----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~v 202 (363)
T TIGR01186 128 ----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIVI 202 (363)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999875433 45566688999999999999999
Q ss_pred ecCCeEEEEcChhHHHH
Q 000787 398 LSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1286)
|++|+++..|+++++..
T Consensus 203 l~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 203 MKAGEIVQVGTPDEILR 219 (363)
T ss_pred EeCCEEEeeCCHHHHHh
Confidence 99999999999998753
No 108
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-37 Score=359.14 Aligned_cols=202 Identities=27% Similarity=0.379 Sum_probs=177.7
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEeccCCCCCCCCC
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVT 957 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 957 (1286)
++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3579999999999999999999999999999999999876 468999999987643 234567999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000787 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1286)
Q Consensus 958 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsg 1037 (1286)
|+|++.|.+.++. ....+.+++++++++.++|.+..+..+ +.|||||||||+||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 233445567899999999988877764 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1038 LD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999878999999999987 57889999999986 799999975
No 109
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.6e-37 Score=341.42 Aligned_cols=208 Identities=23% Similarity=0.322 Sum_probs=176.1
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 567888887731 12469999999999999999999999999999999999875 45899999998753
Q ss_pred h------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
. ..+++.++|++|++.+++.+||+|++.+....+. ...++.+++++++++.+++.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999988889999999998754331 233445567899999999988777663 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|++ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999777999999999986 46778999999986 44
No 110
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-37 Score=338.88 Aligned_cols=209 Identities=24% Similarity=0.417 Sum_probs=178.4
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+|+|+++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 5677777663 2469999999999999999999999999999999999865 468999999987643
Q ss_pred hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 000787 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1286)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl 1016 (1286)
..++.++|++|++.+++.+|++|++.+....+. ....+..+.++++++.+++.+..+.. +..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345679999999988888999999988654432 23344456788999999998776665 357999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1017 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999877999999999986 47788999999986 7887754
No 111
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-37 Score=362.28 Aligned_cols=205 Identities=25% Similarity=0.340 Sum_probs=177.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|++.+||++||+
T Consensus 33 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 109 (377)
T PRK11607 33 HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVE 109 (377)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998865443 47899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+.+.++... .+...+++++++.+||.+..+.. +.+|
T Consensus 110 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~-----~~~L 150 (377)
T PRK11607 110 QNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRK-----PHQL 150 (377)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999865432110 01123467789999998766544 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.+.. +.+++.++|+..++..++|+|++|++|+++
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i~ 229 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKFV 229 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999998876544 455666889999999999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
..|+++++.
T Consensus 230 ~~g~~~~~~ 238 (377)
T PRK11607 230 QIGEPEEIY 238 (377)
T ss_pred EEcCHHHHH
Confidence 999999874
No 112
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.8e-38 Score=315.27 Aligned_cols=196 Identities=25% Similarity=0.343 Sum_probs=172.2
Q ss_pred cccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCCHHHHHHH
Q 000787 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYESLLF 964 (1286)
Q Consensus 886 ~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f 964 (1286)
..+..|.+||++||+||||||||||||.|+|... +.+|.|.|||.+... ....|-++.++|+..+|..+||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 3567899999999999999999999999999887 468999999988654 3356778999999999999999999988
Q ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000787 965 SAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1286)
Q Consensus 965 ~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~ 1044 (1286)
+..-.+ ..+ ++.+++++.++..+||.++.+.+. .+||||||||+++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 743222 122 345567999999999999999884 469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1045 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1045 ~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
.+..++.+++++ +.|++++||+|+ |.....|+++++++ |++.|.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999754 899999999998 79999999999996 799999985
No 113
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.4e-37 Score=356.58 Aligned_cols=214 Identities=27% Similarity=0.373 Sum_probs=184.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 377888888763 2469999999999999999999999999999999999875 4689999999875
Q ss_pred Ch--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000787 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 1012 (1286)
.. ...++.+||++|++.+++.+||+|++.+.+..+. .+.++..++++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2345679999999998899999999987554321 233444556788999999988777764 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||++||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999997 57789999999985 79999997
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 114
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.6e-38 Score=313.60 Aligned_cols=201 Identities=24% Similarity=0.380 Sum_probs=173.2
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHHHHHH
Q 000787 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1286)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1286)
.+++.|++||++||+||||||||||||+|+|+..|. +|+|.+||.+.....| +|-++.++|+.++|..+||++|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999998 9999999999877666 478999999999999999999999
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000787 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1286)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1286)
++.. ++-+. ..+....++.++..+||..+.+.+ +.+|||||
T Consensus 94 LGl~---P~LkL-------------------------------~a~~r~~v~~aa~~vGl~~~~~RL-----P~~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKL-------------------------------NAEQREKVEAAAAQVGLAGFLKRL-----PGELSGGQ 134 (231)
T ss_pred ccCC---ccccc-------------------------------CHHHHHHHHHHHHHhChhhHhhhC-----ccccCchH
Confidence 8753 22110 011123567788999999887755 45699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcC
Q 000787 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1286)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1286)
||||++||+|+++-+|++||||+|+||+.-+.++...+.+++...+.|+++ ++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999988765555555 6666789999999999999999999999
Q ss_pred hhHHH
Q 000787 409 RELVL 413 (1286)
Q Consensus 409 ~~~~~ 413 (1286)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98764
No 115
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-37 Score=340.48 Aligned_cols=215 Identities=24% Similarity=0.362 Sum_probs=180.1
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++.. ...+.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 467777766310 011469999999999999999999999999999999999875 468999999987642
Q ss_pred hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 000787 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1286)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl 1016 (1286)
.++.++||+|++.+++.+|++|++.+....+. ...+...+.++++++.++|.+..+..+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35679999999988888999999988754331 233444567889999999987776653 57999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEec-CcEEEEeCCC
Q 000787 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1286)
Q Consensus 1017 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~-gG~~~y~G~~ 1093 (1286)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999864 4899999999986 47788999999985 4899888764
No 116
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-37 Score=340.34 Aligned_cols=212 Identities=29% Similarity=0.377 Sum_probs=180.7
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ .+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 5677877663 2469999999999999999999999999999999999865 468999999976532
Q ss_pred --hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
...++.++|++|++.+++.+||+|++.+....+. ...++.+++++++++.++|.+..+..+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2335679999999988899999999998754432 233444567899999999988777664 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999987 57788999999985 799988864
No 117
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.6e-37 Score=362.64 Aligned_cols=214 Identities=22% Similarity=0.328 Sum_probs=188.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488999988773 2469999999999999999999999999999999999876 4689999999876
Q ss_pred Ch-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
.. ...+|.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.++|.++.+..+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223567999999999999999999999975433 2344555677899999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 999999999986 68899999999985 89999998
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
+
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 6
No 118
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-37 Score=392.30 Aligned_cols=255 Identities=23% Similarity=0.340 Sum_probs=195.7
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCC-CceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL-PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1286)
.++.....+|+.++++.+++. ........+. ...+|+|+||++.+..
T Consensus 314 ~~~~~~~~~ri~~~l~~~~~~------~~~~~~~~~~~~~~~i~~~~vsf~~~~-------------------------- 361 (588)
T PRK11174 314 KAQAVGAAESLVTFLETPLAH------PQQGEKELASNDPVTIEAEDLEILSPD-------------------------- 361 (588)
T ss_pred HHHHHHHHHHHHHHHcCCCcc------cCCCccccCCCCCceEEEEeeEEeccC--------------------------
Confidence 467778889998888765431 0000111111 1347999999976521
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecC
Q 000787 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1286)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1286)
..++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|.+||+++++... ++.++||+|
T Consensus 362 -------~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q 430 (588)
T PRK11174 362 -------GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQ 430 (588)
T ss_pred -------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecC
Confidence 124999999999999999999999999999999999999 87 9999999999887654 478999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
++.+| +.||+|||.++.. ....+.+.++++... .++. +-.|+++.|
T Consensus 431 ~~~LF-~~TI~eNI~~g~~----~~~~eei~~al~~a~---------------------------l~~~--i~~lp~G~d 476 (588)
T PRK11174 431 NPQLP-HGTLRDNVLLGNP----DASDEQLQQALENAW---------------------------VSEF--LPLLPQGLD 476 (588)
T ss_pred CCcCC-CcCHHHHhhcCCC----CCCHHHHHHHHHHhC---------------------------HHHH--HHhcccccc
Confidence 87655 5699999998631 122233333322211 1112 234778889
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
|.||+++. .||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++. .++|+|+.. |.. ++...||
T Consensus 477 T~vge~G~-~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiIt-Hrl-~~i~~aD 551 (588)
T PRK11174 477 TPIGDQAA-GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVT-HQL-EDLAQWD 551 (588)
T ss_pred cccccCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEe-cCh-HHHHhCC
Confidence 99998765 599999999999999999999999999999999999999999998763 345666644 443 6678899
Q ss_pred cEEEecCCeEEEEcChhHHHH
Q 000787 394 DIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|++|++|++++.|+++++++
T Consensus 552 ~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 552 QIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred EEEEEeCCeEeecCCHHHHHh
Confidence 999999999999999999864
No 119
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.2e-37 Score=343.75 Aligned_cols=215 Identities=26% Similarity=0.354 Sum_probs=180.2
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+|+|+++++|+++||+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4677777663 2469999999999999999999999999999999999875 468999999987643
Q ss_pred h---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCC-------CCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000787 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-------VDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1286)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1286)
. . .++.++|++|++.+++.+||+|++.+....+.... ...++..+.++++++.+++.+..+.. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 1 1 23468999999999999999999988754322110 11334456788999999998776665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999878999999999997 47788999999986 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 99998875
No 120
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3e-37 Score=338.44 Aligned_cols=210 Identities=26% Similarity=0.394 Sum_probs=178.2
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5678877763 2469999999999999999999999999999999999875 468999999987543
Q ss_pred h-cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000787 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
. ..++.++|++|++.+++..|++|++.+....+ ....++.+++++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 1 22457999999998888899999998865432 1233444567889999999988777664 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++++|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999864 899999999986 57788999999985 7888876
No 121
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-37 Score=361.82 Aligned_cols=205 Identities=26% Similarity=0.387 Sum_probs=175.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||+
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 17 VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998865433 46799999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+.+..+... .+....++++++.+||++..+..+ ..|
T Consensus 94 eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~L 134 (369)
T PRK11000 94 ENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KAL 134 (369)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hhC
Confidence 99999865432110 011234677899999987766554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+++
T Consensus 135 SgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~ 213 (369)
T PRK11000 135 SGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVA 213 (369)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 455566788889999999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
..|+++++.
T Consensus 214 ~~g~~~~i~ 222 (369)
T PRK11000 214 QVGKPLELY 222 (369)
T ss_pred EEcCHHHHH
Confidence 999998874
No 122
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=325.01 Aligned_cols=206 Identities=24% Similarity=0.395 Sum_probs=172.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc----ceEEEecCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIGE 240 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~~ 240 (1286)
.+||+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+. .-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 46999999999999999999999999999999999999987 99999999999887663 569999999999999
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcC-Cccccccccccc
Q 000787 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDE 319 (1286)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1286)
|||+|||..++..... .. .. ....+.+.+.|- |.+-.+..-|
T Consensus 93 LTVeENL~~g~~~~~~-~~----------~~------------------------~~~~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRD-KE----------AQ------------------------ERDLEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhcccc-cc----------cc------------------------cccHHHHHHHChhHHHHhcCccc--
Confidence 9999999987643210 00 00 000233333332 3344444444
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
.|||||+|-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+ ..+.+|+.+.|....+.+.+|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~-~~g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRK-EGGMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHH-cCCcEEEEEeccHHHHHHhhCEEEEEe
Confidence 5999999999999999999999999999999999999999999999865 345677779999999999999999999
Q ss_pred CCeEEEEcChhHHHH
Q 000787 400 DGQIVYQGPRELVLE 414 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1286)
+|+|++.|+.+++.+
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998864
No 123
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-37 Score=359.66 Aligned_cols=217 Identities=22% Similarity=0.299 Sum_probs=184.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|++++++.. ...+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5688888877411 013579999999999999999999999999999999999876 46899999998764
Q ss_pred hh------cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
.. .+++.+||++|++.+++.+||+||+.+....+ ..+.++.+++++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 21 23567999999999999999999999875443 233445556789999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999987 57788999999985 7999
Q ss_pred EeCCC
Q 000787 1089 YVGPL 1093 (1286)
Q Consensus 1089 y~G~~ 1093 (1286)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99975
No 124
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.3e-37 Score=341.74 Aligned_cols=212 Identities=26% Similarity=0.361 Sum_probs=180.2
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ .+.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 5677777763 2469999999999999999999999999999999999876 468999999987532
Q ss_pred h---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000787 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 1012 (1286)
. . .++.++|++|++.+++.+||+|++.+....+. ...++..+.++++++.+++.+..+.. +..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHH
Confidence 1 1 23468999999999999999999988643321 23344456788999999998777665 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999997 58889999999985 79999887
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=328.45 Aligned_cols=217 Identities=26% Similarity=0.346 Sum_probs=179.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++.+|++..++... ....+|+||||+|.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 367788887765321 11259999999999999999999999999999999999877 4689999999765
Q ss_pred Chh----cccceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCC
Q 000787 935 KQE----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSG 1007 (1286)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~ 1007 (1286)
... .+.+.+.+|+||+. +.|..||++.|.=.... ...++. .+++.++++.+||.+ +.+.. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 432 46788999999985 67889999988654332 122333 334899999999975 33443 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||||||++|||||+.+|++|+||||||+||+..++.|++.|.++.++ |.|.|+++||.+. +..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 8899999999874 7789999999996 79
Q ss_pred EEEeCCCC
Q 000787 1087 EIYVGPLG 1094 (1286)
Q Consensus 1087 ~~y~G~~~ 1094 (1286)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999974
No 126
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-36 Score=359.77 Aligned_cols=222 Identities=27% Similarity=0.424 Sum_probs=185.5
Q ss_pred CcccCC-CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEE
Q 000787 846 GMVLPF-EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT 924 (1286)
Q Consensus 846 ~~~~~~-~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~ 924 (1286)
|...|. -...++|+||+|+|+..+ +.++|+|+||+|+|||.||||||||+||||+.+.|..... +.+
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--Pts 522 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTS 522 (716)
T ss_pred CccccccccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 433442 345799999999998653 4679999999999999999999999999999999998766 578
Q ss_pred EEEEEcCccCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHH-----HHHHHHHHcCCCccc
Q 000787 925 GNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKM-----FIDEVMELVELNPLR 996 (1286)
Q Consensus 925 G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~-----~v~~~l~~l~l~~~~ 996 (1286)
|.|.+||+|+++ ..+++.+|+|.|+|.++. -||+||+.|+.. ..+.++... .+++.+. ++.+-.
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY 594 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGY 594 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCcccc
Confidence 999999999764 457889999999999986 599999999753 334443222 2222332 345557
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcC
Q 000787 997 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1076 (1286)
Q Consensus 997 ~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D 1076 (1286)
|+.+|..| ..||||||||++|||||++||.||||||+||.||+++...|.++|.++.+ |+|||+++|+.| ..+.+|
T Consensus 595 ~T~VGEkG-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad 670 (716)
T KOG0058|consen 595 NTVVGEKG-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHAD 670 (716)
T ss_pred ccccCCcc-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--Hhhhcc
Confidence 89999876 47999999999999999999999999999999999999999999998865 699999999986 578899
Q ss_pred EEEEEecCcEEEEeCC
Q 000787 1077 ELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1077 ~~~lL~~gG~~~y~G~ 1092 (1286)
+|+++++ |+++..|.
T Consensus 671 ~Ivvi~~-G~V~E~G~ 685 (716)
T KOG0058|consen 671 QIVVIDK-GRVVEMGT 685 (716)
T ss_pred EEEEEcC-CeEEeccc
Confidence 9999986 79999995
No 127
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.4e-37 Score=339.28 Aligned_cols=215 Identities=27% Similarity=0.415 Sum_probs=180.6
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++.. .....+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4678888776411 011269999999999999999999999999999999999875 46899999998764
Q ss_pred h--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
. ..+++.++|++|++.+++.+||+|++.+....+ .....+..+.++++++.+++.+..+.. +..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHH
Confidence 3 234567999999998888899999998865433 123445566789999999998877765 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 6887654
No 128
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-37 Score=341.96 Aligned_cols=216 Identities=27% Similarity=0.392 Sum_probs=181.3
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ .+.+|+|||+++++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888888763 2469999999999999999999999999999999999875 46899999998754
Q ss_pred hh-cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
.. ..++.++|++|++.+++.+||+|++.+....+.. ......+..+.++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 31 2245699999999888889999999886543211 00122334556889999999987776653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999865 899999999986 47788999999985 79999987
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 129
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-37 Score=361.87 Aligned_cols=214 Identities=25% Similarity=0.374 Sum_probs=185.6
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.+. ++.+|+|+|++|++|++++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 377888887763 2469999999999999999999999999999999999876 4689999999876
Q ss_pred Ch-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
.. ...++.+|||+|+..+++.+||+||+.|+...+. .+.++.+++++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 43 1234679999999999999999999998764432 234555677999999999988877764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999987 58889999999985 79999998
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
+
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 6
No 130
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.8e-36 Score=375.08 Aligned_cols=217 Identities=29% Similarity=0.449 Sum_probs=181.5
Q ss_pred cCCCCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEE
Q 000787 849 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT 928 (1286)
Q Consensus 849 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~ 928 (1286)
.|.-...++|+|++|.++. +...+|+|+|++|+|||.+||+|+||||||||+|+|.|... +..|+|+
T Consensus 465 ~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 3444568999999999963 22369999999999999999999999999999999999887 5689999
Q ss_pred EcCccCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------ccc
Q 000787 929 ISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQS 998 (1286)
Q Consensus 929 i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~ 998 (1286)
+||+++.+ ..+|+.+|||+|++.++. -|++||+.++. ++.+.+ .+.++++..|..+. .++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDE----EIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHH----HHHHHHHHhCcHHHHHhccccccc
Confidence 99998643 568899999999998765 69999999852 233322 24455555554432 345
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEE
Q 000787 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1078 (1286)
Q Consensus 999 ~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~ 1078 (1286)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.++. +|+|+|+++|+++ .++.+|++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 56654 46899999999999999999999999999999999999999999999985 5799999999996 58899999
Q ss_pred EEEecCcEEEEeCCC
Q 000787 1079 FLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1079 ~lL~~gG~~~y~G~~ 1093 (1286)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99985 899999985
No 131
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-37 Score=359.51 Aligned_cols=214 Identities=24% Similarity=0.363 Sum_probs=187.8
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 588999987763 2468999999999999999999999999999999999876 4689999999876
Q ss_pred Ch-hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
.. ...+|.+|||+|+..++|.+||.||+.|+...+ ..+..+.+++++++++.++|.+..+.. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999975433 234556677899999999999888776 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.+ .|.|+|++|||+. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999987 68899999999985 79999998
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
+
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 6
No 132
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-37 Score=356.63 Aligned_cols=206 Identities=27% Similarity=0.375 Sum_probs=175.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1286)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 45999999999999999999999999999999999999998 9999999998765432 35799999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+.+||+||+.|+....+... .+....++++++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998764432110 001124567889999987766554
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999987653 3455666788889999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998774
No 133
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.9e-38 Score=320.23 Aligned_cols=206 Identities=26% Similarity=0.362 Sum_probs=183.0
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhc----ccceEEEeccCCCCCC
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 954 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~~ 954 (1286)
+++.++++||+.|++||++||+|||||||||.+.++.|... +.+|.|.+||.++.... .+..+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 45789999999999999999999999999999999999876 46899999999876432 2346899999999999
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000787 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1286)
Q Consensus 955 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEP 1034 (1286)
.+||+||+..-...+.. +....+++.+++++|+.+++.++++... ..||||||+|+.|||||+.+|+.|+||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999876665532 2233566777899999999999999873 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1035 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1035 TsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
++|+||.+-..|.++++.+.+.|..|++|-|... +....+||.+++.+ |+++..|.+.
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 9999999999999999999999999999999987 68999999999997 7999999863
No 134
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6.2e-37 Score=356.17 Aligned_cols=205 Identities=27% Similarity=0.392 Sum_probs=176.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1286)
.+|+||||+|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+||
T Consensus 55 ~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 131 (340)
T PRK13536 55 AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTV 131 (340)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.|.....+... .+....++++++.+||++..++.++ +
T Consensus 132 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~-----~ 172 (340)
T PRK13536 132 RENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS-----D 172 (340)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----h
Confidence 999987654432110 0011234567889999988877765 5
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 173 LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~i 250 (340)
T PRK13536 173 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGRK 250 (340)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999754 3 45566678899999999999999999999
Q ss_pred EEEcChhHHHH
Q 000787 404 VYQGPRELVLE 414 (1286)
Q Consensus 404 v~~G~~~~~~~ 414 (1286)
+++|+++++.+
T Consensus 251 ~~~g~~~~l~~ 261 (340)
T PRK13536 251 IAEGRPHALID 261 (340)
T ss_pred EEEcCHHHHHh
Confidence 99999998865
No 135
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.2e-37 Score=362.67 Aligned_cols=218 Identities=26% Similarity=0.362 Sum_probs=185.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++ ++.+|+|+||.|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 377888887763 3579999999999999999999999999999999999876 4689999999875
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..+++.+|||+|++.+++.+||+|++.++....... ....+..+++++++++.+++.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 345678999999999888999999999864321100 1012334567899999999998888763 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||+.|||+|+++|+||||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999997 57889999999985 799999
Q ss_pred CCCC
Q 000787 1091 GPLG 1094 (1286)
Q Consensus 1091 G~~~ 1094 (1286)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9864
No 136
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.5e-37 Score=335.79 Aligned_cols=206 Identities=30% Similarity=0.397 Sum_probs=175.7
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ .+.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5677777663 2469999999999999999999999999999999999875 468999999987543
Q ss_pred -hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000787 937 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 937 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
...++.++||+|++.+++.+||+|++.+....+. . .+++++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2345679999999988889999999988654321 1 1345788999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877999999999987 46778999999985 7888765
No 137
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.2e-37 Score=358.50 Aligned_cols=202 Identities=25% Similarity=0.298 Sum_probs=178.8
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcc----cceEEEeccCCCC
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETF----ARISGYCEQNDIH 952 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~----~~~~gyv~Q~~~~ 952 (1286)
.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+ ++.+|||+|++.+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4569999999999999999999999999999999999876 568999999987653 122 5689999999999
Q ss_pred CCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000787 953 SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1286)
Q Consensus 953 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LD 1032 (1286)
++.+||+||+.|...+. ..+.++..+++.++++.++|.+..+..+ ..|||||||||+|||||+.+|+|||||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999976543 2345666778999999999988877764 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1033 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1033 EPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|||++||+.++..+++.|+++.++ |+|||++||++. ++.+.+|++++|++ |+++..|++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999999754 899999999986 57889999999985 799999975
No 138
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.2e-37 Score=352.63 Aligned_cols=212 Identities=23% Similarity=0.364 Sum_probs=184.7
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++ ++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67788887763 2569999999999999999999999999999999999876 46899999998764
Q ss_pred h--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
. ...++.+||++|++.+++.+||.|++.|.+.++. ...++..++++++++.++|.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998775542 233445567899999999998887764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||++||+||+++|++|||||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999865 799999999987 58889999999985 799999986
No 139
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.7e-37 Score=340.24 Aligned_cols=213 Identities=23% Similarity=0.280 Sum_probs=177.7
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCC-----CCceEEEEEEEcC
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNITISG 931 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~-----~~~~~~G~i~i~g 931 (1286)
+++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 5677777653 236999999999999999999999999999999999986 4 5689999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.+... ..+++.++|++|++.++ .+||+||+.+....+. ....++.+++++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 23456799999998877 7999999988754331 11222345678899999999876655421 25
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ ++.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999877 99999999987 47788999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9999875
No 140
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.7e-37 Score=337.78 Aligned_cols=221 Identities=35% Similarity=0.603 Sum_probs=182.3
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC-CceEEEEEEEcCccC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYITGNITISGYPK 934 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~-~~~~~G~i~i~g~~~ 934 (1286)
+.|+|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 56788888774210 13579999999999999999999999999999999999864 123689999999876
Q ss_pred ChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHH-HHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDE-VMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
.....++.++|++|++.+++.+||+||+.|.+..........+.....+++ .++.+++.++.++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544566789999999999999999999998765433222222233334555 89999998776654 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998877999999999985468899999999986 7888765
No 141
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-37 Score=340.49 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=181.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4678887776310 001369999999999999999999999999999999999876 46899999998754
Q ss_pred hh------cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 21 235679999999999889999999988654332 23344456788999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 47788999999985 7999
Q ss_pred EeCCC
Q 000787 1089 YVGPL 1093 (1286)
Q Consensus 1089 y~G~~ 1093 (1286)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 98874
No 142
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-37 Score=342.79 Aligned_cols=216 Identities=26% Similarity=0.316 Sum_probs=178.1
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ +++.+|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYP------------NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecC------------CccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 4677776653 11469999999999999999999999999999999999875 458999999987542
Q ss_pred ------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhh-----cCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000787 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1286)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1286)
...++.++|++|++.+++.+||+|++.+..... ...........++++++++.+++.+..+.. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 224567999999998888899999998753210 000111223445688899999998776665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999997 47779999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 799999875
No 143
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-37 Score=334.79 Aligned_cols=199 Identities=29% Similarity=0.442 Sum_probs=166.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 14 RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998754332 35799999998888999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.++....+... ......++.+++.+||++..++.+ ..|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03259 91 ENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYP-----HEL 131 (213)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 99988653221100 001123566788999987666554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|+|++|++|+++
T Consensus 132 SgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~ 210 (213)
T cd03259 132 SGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRIV 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876433 455666788888999999999999999998
Q ss_pred EEc
Q 000787 405 YQG 407 (1286)
Q Consensus 405 ~~G 407 (1286)
+.|
T Consensus 211 ~~g 213 (213)
T cd03259 211 QVG 213 (213)
T ss_pred ecC
Confidence 765
No 144
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=347.34 Aligned_cols=218 Identities=27% Similarity=0.400 Sum_probs=177.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc-----ccceEEEecCCCC-CC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDN-HI 238 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1286)
+++|+|||++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999886532 2467999999863 44
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc--ccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD--VCADTMV 316 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1286)
..+||+||+.|+....+.. + ++....++++++.+||+ +..|
T Consensus 97 ~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~--- 139 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS-E---------------------------------EEIENRVKRAMNIVGLDYEDYKD--- 139 (287)
T ss_pred ccccHHHHHHhHHHHCCCC-H---------------------------------HHHHHHHHHHHHHcCCCchhhcc---
Confidence 5689999999875432210 0 11123467789999996 4444
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 317 g~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
+.++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++.+. .+++|+.++|+..++..+||+|+
T Consensus 140 --~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 140 --KSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred --CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 345679999999999999999999999999999999999999999999987653 35566668888899999999999
Q ss_pred EecCCeEEEEcChhHHHH---HHHhCCCCCCC
Q 000787 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~cp~ 425 (1286)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999998753 23345655544
No 145
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.4e-37 Score=337.10 Aligned_cols=208 Identities=28% Similarity=0.408 Sum_probs=173.0
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++.. ...+.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehh
Confidence 3567887776311 001469999999999999999999999999999999999876 46899999998754
Q ss_pred hh------c-ccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000787 936 QE------T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1286)
Q Consensus 936 ~~------~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 1008 (1286)
.. . .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.++|.+..+..+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 21 1 24579999999999899999999998764432 223344567889999999987776653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.+|++++|++|
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~G 216 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRDG 216 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeCC
Confidence 99999999999999999999999999999999999999999999977 58999999999863 4 489999999863
No 146
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.2e-36 Score=339.83 Aligned_cols=214 Identities=22% Similarity=0.334 Sum_probs=181.7
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56788877763 2469999999999999999999999999999999999865 46899999998754
Q ss_pred h-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 936 Q-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
. ...++.++|++|++.+++.+||+|++.+...... .....+.++.+.++++.+++.+..+.. +..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2345679999999988888999999987642111 123444556788999999998777665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999987 47788999999985 799999
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 147
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.6e-37 Score=334.86 Aligned_cols=192 Identities=28% Similarity=0.388 Sum_probs=163.9
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCC-CCCCCCHH
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTIY 959 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 959 (1286)
+.+|+|+||++++|++++|+|||||||||||++|+|... +.+|+|.++|.+......++.+||++|++. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 369999999999999999999999999999999999876 468999999987644445567999999974 33467999
Q ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000787 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1286)
Q Consensus 960 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD 1039 (1286)
||+.+..... . . ..++++++++.++|.+..+..+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~--~---~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL--D---A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc--C---c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998764322 1 1 1245789999999988777663 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1040 ~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999987 47778999999986 6653
No 148
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=334.27 Aligned_cols=204 Identities=29% Similarity=0.384 Sum_probs=171.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 14 EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 4999999999999999999999999999999999999998 999999998764321 23579999999988999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.+.....+... .+....++++++.+||++..++.+ ..
T Consensus 91 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 131 (220)
T cd03265 91 WENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----KT 131 (220)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----hh
Confidence 999998754322100 001124567899999987766655 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|+|++|++|++
T Consensus 132 LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~i 210 (220)
T cd03265 132 YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGRI 210 (220)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999876532 44566688888999999999999999999
Q ss_pred EEEcChhHH
Q 000787 404 VYQGPRELV 412 (1286)
Q Consensus 404 v~~G~~~~~ 412 (1286)
++.|+++++
T Consensus 211 ~~~~~~~~~ 219 (220)
T cd03265 211 IAEGTPEEL 219 (220)
T ss_pred EEeCChHHc
Confidence 999987653
No 149
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=337.68 Aligned_cols=209 Identities=30% Similarity=0.404 Sum_probs=171.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 16 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 92 (239)
T cd03296 16 VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVF 92 (239)
T ss_pred EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHH
Confidence 4999999999999999999999999999999999999987 9999999988754332 35799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.|+....+...+. + ..+....++.+++.+||++..++.+ ..|
T Consensus 93 e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 137 (239)
T cd03296 93 DNVAFGLRVKPRSERP-------------------P-----------EAEIRAKVHELLKLVQLDWLADRYP-----AQL 137 (239)
T ss_pred HHHhhhhhhccccccC-------------------C-----------HHHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 9999875332110000 0 0001123567788999977666544 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+.+|+|++|++|+++
T Consensus 138 S~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (239)
T cd03296 138 SGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRIE 216 (239)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 9999999999999999999999999999999999999999999876533 445555777888899999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
+.|+++++.
T Consensus 217 ~~~~~~~~~ 225 (239)
T cd03296 217 QVGTPDEVY 225 (239)
T ss_pred EecCHHHHh
Confidence 999988763
No 150
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.6e-36 Score=341.12 Aligned_cols=214 Identities=26% Similarity=0.359 Sum_probs=181.3
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.+. ++.+|+|+||+|++|++++|+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887763 2469999999999999999999999999999999999875 45799999997653
Q ss_pred h-----------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000787 936 Q-----------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1286)
Q Consensus 936 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1286)
. ...++.++|++|++.+++.+|++|++.+...... ....++..+.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235679999999988888999999987543211 123344556788999999998776655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1005 ~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999999877999999999986 47788999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 799999875
No 151
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=348.00 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=181.7
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++... ...+.+|+||||+|.+||++||+||||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67889988874210 012469999999999999999999999999999999999876 46899999998764
Q ss_pred h-----hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC--cccccccCCCCCCC
Q 000787 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN--PLRQSLVGLPGVSG 1007 (1286)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~~g~~~~~~ 1007 (1286)
. ...++.+|||+|++. .+...||+|++.|+.... ..+.++..++++++++.+||. +..+.. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 234568999999863 334579999999865432 244556667789999999996 555554 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 999999999986 47788999999986 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999975
No 152
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=336.76 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=180.4
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++... ..+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~~---------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEGS---------VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCCC---------cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 378899988874210 11469999999999999999999999999999999999875 4689999999876
Q ss_pred Chhc------c-cceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000787 935 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1286)
Q Consensus 935 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1286)
.... + ++.++|++|++.+++.+|++||+.+....+ ....++.+++++++++.++|.+..+.. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 4311 2 256999999998888899999999865432 123344556789999999998777665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||||||++||++|+.+|+||||||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 58999999999863 4 44689999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
++..|++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9998876
No 153
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.7e-37 Score=351.75 Aligned_cols=206 Identities=28% Similarity=0.395 Sum_probs=176.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1286)
+++|+|+|+.|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45999999999999999999999999999999999999998 999999998875421 2357999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.|.+++.+... .+....++++++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765433110 0011245678999999887776654
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++.+ . +++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998754 3 4556668888999999999999999999
Q ss_pred EEEEcChhHHHH
Q 000787 403 IVYQGPRELVLE 414 (1286)
Q Consensus 403 iv~~G~~~~~~~ 414 (1286)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999998765
No 154
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1e-36 Score=335.90 Aligned_cols=214 Identities=25% Similarity=0.391 Sum_probs=180.0
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++. +.+.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 356777776631 11469999999999999999999999999999999999875 46899999998764
Q ss_pred h--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
. ..+++.++|++|++.+++.+|++||+.+....+. ...++..+.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 2 2345679999999988889999999988654332 233344566889999999987776653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999876 699999999997 47778999999985 799998875
No 155
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1e-36 Score=334.40 Aligned_cols=206 Identities=25% Similarity=0.344 Sum_probs=174.4
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ +++.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788887762 12369999999999999999999999999999999999875 46899999998754
Q ss_pred h------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
. ..+++.++|++|++.+++.+|++|++.+....+. ...+..+++++++++.+++.+..+..+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999988889999999998754331 233444567889999999987666653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999864
No 156
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=339.74 Aligned_cols=213 Identities=27% Similarity=0.374 Sum_probs=179.9
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++. .+.+|+|+|++|++|++++|+|||||||||||++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 46777776631 1459999999999999999999999999999999999876 457999999986532
Q ss_pred ---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCHH
Q 000787 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSgG 1011 (1286)
...++.++|++|++.+++.+||+||+.+...++. .+.++..+.++++++.+++.+ ..+.. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2345678999999999989999999988654331 233445567889999999985 55554 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999765 899999999986 57788999999985 799999
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 157
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.4e-36 Score=348.25 Aligned_cols=205 Identities=29% Similarity=0.411 Sum_probs=173.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 18 ~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 94 (303)
T TIGR01288 18 VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTV 94 (303)
T ss_pred EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcH
Confidence 4999999999999999999999999999999999999998 999999998874322 24679999999988999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.+.....+.... +....++.+++.+||++..++.++ .
T Consensus 95 ~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~ll~~~~l~~~~~~~~~-----~ 135 (303)
T TIGR01288 95 RENLLVFGRYFGMSTR----------------------------------EIEAVIPSLLEFARLESKADVRVA-----L 135 (303)
T ss_pred HHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHCCChhHhcCchh-----h
Confidence 9999875433221000 011234567889999887776654 6
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 136 LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~i 213 (303)
T TIGR01288 136 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGRK 213 (303)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 45566688888999999999999999999
Q ss_pred EEEcChhHHHH
Q 000787 404 VYQGPRELVLE 414 (1286)
Q Consensus 404 v~~G~~~~~~~ 414 (1286)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (303)
T TIGR01288 214 IAEGRPHALID 224 (303)
T ss_pred EEEcCHHHHHh
Confidence 99999998754
No 158
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-36 Score=333.50 Aligned_cols=206 Identities=25% Similarity=0.368 Sum_probs=174.0
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
.++|+++.++ +.+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777663 12469999999999999999999999999999999999865 468999999986532
Q ss_pred ------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
..+++.++|++|++.+++.+|++||+.+....+. ...++.+++++++++.+++.+..+.. +..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCH
Confidence 1245679999999999999999999998754332 23344456788999999998777665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++ |+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999999777999999999986 46678999999986 44
No 159
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=345.70 Aligned_cols=218 Identities=24% Similarity=0.351 Sum_probs=175.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------cccceEEEecCCCC-
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDN- 236 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1286)
.++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 34999999999999999999999999999999999999998 99999999987531 12357999999852
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1286)
.+...||+||+.|+....+... .+....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3446799999998754322110 01112467789999996 445544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4579999999999999999999999999999999999999999999987653 3455666888889999999999
Q ss_pred EEecCCeEEEEcChhHHHH---HHHhCCCCCCC
Q 000787 396 ILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~f~~~G~~cp~ 425 (1286)
++|++|++++.|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999988742 23444554444
No 160
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-36 Score=335.86 Aligned_cols=210 Identities=28% Similarity=0.417 Sum_probs=175.3
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+|+||++++|+++||+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCC
Confidence 5677776652 2469999999999999999999999999999999999876 468999999987542
Q ss_pred h---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCHH
Q 000787 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
. . .++.++|++|++.+++.+|++||+.+...... ..+.++.+.++++.+ ++.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHH
Confidence 1 1 24569999999999999999999988654321 122344567788887 466655554 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 214 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEG 214 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeC
Confidence 999999999999999999999999999999999999999999877999999999986 47788999999985 7999988
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
+.
T Consensus 215 ~~ 216 (222)
T cd03224 215 TA 216 (222)
T ss_pred CH
Confidence 74
No 161
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.4e-36 Score=336.63 Aligned_cols=214 Identities=27% Similarity=0.389 Sum_probs=172.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 14 VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 4999999999999999999999999999999999999987 9999999998765432 24699999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.++....+... ..+. .... ...+....++++++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~~-------~~~~------~~~~-----------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 91 TVLENVMVAAQARTGSG-------LLLA------RARR-----------EEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CHHHHHHHHHhhccccc-------cccc------cccc-----------cHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 99999998754321000 0000 0000 00011234677889999987666544
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++|+|++|++|
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 56999999999999999999999999999999999999999999998754 34 45566788888999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+++++.
T Consensus 220 ~i~~~~~~~~~~ 231 (236)
T cd03219 220 RVIAEGTPDEVR 231 (236)
T ss_pred EEEeecCHHHhc
Confidence 999999988763
No 162
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=9.5e-37 Score=341.42 Aligned_cols=217 Identities=24% Similarity=0.281 Sum_probs=178.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.+. .++.+|+|+|+++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 45778877653 02459999999999999999999999999999999999875 46899999998753
Q ss_pred h------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhh-----cCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000787 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1286)
. ..+++.++|++|++.+++.+||+||+.+..... .......++.+++++++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 124567999999998888999999998742110 000111233456788999999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1005 ~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999987 46788999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 799988875
No 163
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-36 Score=335.55 Aligned_cols=205 Identities=30% Similarity=0.402 Sum_probs=172.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 5999999999999999999999999999999999999998 9999999998764321 357999999998899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.+.....+... ......++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988654321100 001123567889999987666544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999987543 24555667788888999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987653
No 164
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=344.25 Aligned_cols=215 Identities=24% Similarity=0.328 Sum_probs=181.8
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++. ...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 3778899887731 2359999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ...++.+||++|++. .++..||.|++.|+.... ..+.++.+++++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 234567999999863 345689999999864321 2344455567899999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 46788999999985 799999
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 985
No 165
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=343.87 Aligned_cols=224 Identities=27% Similarity=0.382 Sum_probs=180.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------cccceEEEecCCC-CC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHD-NH 237 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1286)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 4999999999999999999999999999999999999998 99999999987521 1246799999985 24
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1286)
+...||.||+.|+....+... .+...++.++++.+||. ...+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~--- 139 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWE--- 139 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhcc---
Confidence 445799999999764332110 01122456788899995 3444
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 317 g~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
+.++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|+|+
T Consensus 140 --~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 140 --KSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred --CCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 4556667888899999999999
Q ss_pred EecCCeEEEEcChhHHH---HHHHhCCCCCCCCCChHHHH
Q 000787 397 LLSDGQIVYQGPRELVL---EFFASMGFRCPKRKGVADFL 433 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~---~~f~~~G~~cp~~~~~adfl 433 (1286)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999874 34556777776655544444
No 166
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-37 Score=325.41 Aligned_cols=221 Identities=28% Similarity=0.405 Sum_probs=187.8
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc----ceEEEecCCCCCC
Q 000787 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1286)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1286)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4567999999999999999999999999999999999999998 99999999999888764 4578899999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
++|||.||+..++..+.. ... .... |. ...+..+...++.++|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~---------~l~~-~~---------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSG---------LLGR-PR---------ARKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhh---------hhcc-cc---------chhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998754321 000 0000 00 0001123345678899999999999988875
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ .++++|+.+-|+..-++.+||+|+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999865 45677777999999999999999999
Q ss_pred cCCeEEEEcChhHHHH
Q 000787 399 SDGQIVYQGPRELVLE 414 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1286)
+.|+++..|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 167
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=338.99 Aligned_cols=212 Identities=27% Similarity=0.374 Sum_probs=179.6
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|+|++|++|++++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56778877663 2469999999999999999999999999999999999875 45899999998764
Q ss_pred hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000787 936 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
. ..+.+||++|++.+++.+||+|++.+....+ .....+..++++++++.++|.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 2345899999998888899999998864432 123344456789999999998776665 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEec-CcEEEEeCCC
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~-gG~~~y~G~~ 1093 (1286)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999997 57788999999985 5899888764
No 168
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.9e-36 Score=330.61 Aligned_cols=199 Identities=30% Similarity=0.424 Sum_probs=167.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 4999999999999999999999999999999999999987 9999999998754332 35799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.++.+..+... .+....++++++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988654321100 001123567788999987766555 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++...+ ++|+.++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765334 45555778888999999999999999999
Q ss_pred EEc
Q 000787 405 YQG 407 (1286)
Q Consensus 405 ~~G 407 (1286)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 169
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.8e-36 Score=342.13 Aligned_cols=215 Identities=19% Similarity=0.290 Sum_probs=182.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+||||+|++|++++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Chh------cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000787 935 KQE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1286)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 1008 (1286)
... ..++.++|++|+..+++.+||.||+.+...... ..+.+..++.+.++++.+++.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134579999999988888999999988643211 1233444566888999999988777653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
|||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 47788999999985 799
Q ss_pred EEeCCC
Q 000787 1088 IYVGPL 1093 (1286)
Q Consensus 1088 ~y~G~~ 1093 (1286)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999875
No 170
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=343.68 Aligned_cols=203 Identities=25% Similarity=0.311 Sum_probs=173.9
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh---c----ccceEEEeccCCC
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDI 951 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 951 (1286)
+.+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 34579999999999999999999999999999999999876 4589999999875421 1 1357999999998
Q ss_pred CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000787 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1286)
Q Consensus 952 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~L 1031 (1286)
+++.+||+|++.+..... .....+..++++++++.++|.+..+..+ ..||||||||++||++|+.+|+||||
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 888999999998875432 1233444567889999999988777764 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1032 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1032 DEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999986 47788999999985 799999875
No 171
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-36 Score=357.00 Aligned_cols=255 Identities=27% Similarity=0.398 Sum_probs=196.1
Q ss_pred HhhHHHHHHhhhccccChHHHHHHHHHhhhh-cCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 79 QERQRLIDKLVKVTDVDNERFLLKLKNRIDR-VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
+...+..|+++...+.+++. .+.-.. .-...|.++++.+||++.++.
T Consensus 285 ~~g~aa~d~i~~~l~~~~~~-----~~~~~~~~~~~~~~~ei~~~~l~~~y~~--------------------------- 332 (559)
T COG4988 285 AAGEAAADKLFTLLESPVAT-----PGSGEKAEVANEPPIEISLENLSFRYPD--------------------------- 332 (559)
T ss_pred hhhhhHHHHHHHHhcCCCCC-----CCCccccccccCCCceeeecceEEecCC---------------------------
Confidence 34566667777666666541 111111 122346889999999999853
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
.+++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+.++... +++++||+|+
T Consensus 333 ------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~ 403 (559)
T COG4988 333 ------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQN 403 (559)
T ss_pred ------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCC
Confidence 115899999999999999999999999999999999999998 9999999999877654 5899999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.++ ..|+||||.++.. ....+.+.++.++. .+.+.+.-+.+.||
T Consensus 404 p~lf-~gTireNi~l~~~----~~s~e~i~~al~~a------------------------------~l~~~v~~p~GLdt 448 (559)
T COG4988 404 PYLF-AGTIRENILLARP----DASDEEIIAALDQA------------------------------GLLEFVPKPDGLDT 448 (559)
T ss_pred Cccc-cccHHHHhhccCC----cCCHHHHHHHHHHh------------------------------cHHHhhcCCCcccc
Confidence 7555 4699999998752 11122222221111 11222333667899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+ ++|||||+|||++||||+.+++++++||||++||.+|+..|.+.|.++++ ++|+++ ++| +.+...-+|+
T Consensus 449 ~ige~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itH-rl~~~~~~D~ 523 (559)
T COG4988 449 VIGEGG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITH-RLEDAADADR 523 (559)
T ss_pred hhccCC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEc-ChHHHhcCCE
Confidence 999765 47999999999999999999999999999999999999999999998764 355555 444 4567788999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++++|.++++.+
T Consensus 524 I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 524 IVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EEEecCCceeccCCHHHHhh
Confidence 99999999999999999854
No 172
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=9.3e-37 Score=390.16 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=195.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++....++|+.++++.++|. .. +....+.....|+|+||++.++.
T Consensus 418 ~~~~~~~~~ri~~~l~~~~e~-----~~--~~~~~~~~~~~I~~~nvsf~Y~~--------------------------- 463 (686)
T TIGR03797 418 ILAVIPLWERAKPILEALPEV-----DE--AKTDPGKLSGAIEVDRVTFRYRP--------------------------- 463 (686)
T ss_pred HHHHHHHHHHHHHHhcCCccc-----cc--CcCCCCCCCceEEEEEEEEEcCC---------------------------
Confidence 567788888888887765541 00 00001112347999999999842
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
...++|+|+|++|+||+.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++..+ ++.++||+|+
T Consensus 464 -----~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 535 (686)
T TIGR03797 464 -----DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQN 535 (686)
T ss_pred -----CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccC
Confidence 1134999999999999999999999999999999999999998 9999999999987654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+| +.|++|||.++.. ...+.+.++++. .++ ++. ...|+++.||
T Consensus 536 ~~lf-~gTI~eNi~~~~~-----~~~e~i~~al~~---a~l------------------------~~~--i~~lp~G~dt 580 (686)
T TIGR03797 536 GRLM-SGSIFENIAGGAP-----LTLDEAWEAARM---AGL------------------------AED--IRAMPMGMHT 580 (686)
T ss_pred CccC-cccHHHHHhcCCC-----CCHHHHHHHHHH---cCc------------------------HHH--HHhccccccc
Confidence 7665 5799999998642 112222222221 111 111 2246788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+ ..||||||||++|||||+++|++|+||||||+||+.++.+|.+.|+++ ++|+|+ ++|.. ++.+.+|+
T Consensus 581 ~ige~G-~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~ 653 (686)
T TIGR03797 581 VISEGG-GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADR 653 (686)
T ss_pred cccCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCE
Confidence 999876 469999999999999999999999999999999999999999999863 355555 45543 66778999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++++|+++++++
T Consensus 654 Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 654 IYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999864
No 173
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-37 Score=312.89 Aligned_cols=206 Identities=30% Similarity=0.444 Sum_probs=175.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc---ceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lT 242 (1286)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|.+||.+++.+.+. +.-+.++|+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 4999999999999999999999999999999999999998 99999999999988764 56789999988877789
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+|-+.+++.-.+.+.. ..+...+++..|...++.+.+. +..+
T Consensus 92 v~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~-----R~y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAG-----RDYR 134 (259)
T ss_pred HHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhc-----cchh
Confidence 99999998744322111 0012234666777888877665 3456
Q ss_pred CCChhHhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 323 GISGGQKKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~------~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
.|||||||||.+||.|+. ++++||||||||+||......+++..+++++. + ..|+++.|+..-+..++|+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheee
Confidence 799999999999999985 44689999999999999999999999999874 3 556668899999999999999
Q ss_pred EecCCeEEEEcChhHHH
Q 000787 397 LLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1286)
+|.+|+++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999999876
No 174
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=330.90 Aligned_cols=208 Identities=32% Similarity=0.477 Sum_probs=175.9
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+|+||++++| ++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 5677777663 246999999999999 999999999999999999999876 468999999987543
Q ss_pred --hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
...++.++|++|++.+++.+||+|++.+....+. ...++..+.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2345679999999998889999999988654432 223344567889999999987776653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 46678999999986 7887765
No 175
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2e-36 Score=332.71 Aligned_cols=194 Identities=25% Similarity=0.384 Sum_probs=163.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 4999999999999999999999999999999999999998 999999999875432 2357999999998899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.++.+..+... .+....++++++.+||++..+..+
T Consensus 94 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 136 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP--- 136 (216)
T ss_pred cccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754322100 001123567889999987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++..++|+|++|+
T Consensus 137 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 137 --MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTLS 212 (216)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998753 3 4456667888889999999999999
Q ss_pred CCeE
Q 000787 400 DGQI 403 (1286)
Q Consensus 400 ~G~i 403 (1286)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9974
No 176
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.8e-36 Score=339.98 Aligned_cols=205 Identities=20% Similarity=0.222 Sum_probs=152.9
Q ss_pred CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000787 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1286)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1286)
.|..+.+.+|.+.++. +.-+++.+++..+..-...+++|+||+||||+++++.|... +..|-+-+++
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 4456888888877642 11268999999999999999999999999999999998655 3466665543
Q ss_pred ccCChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 932 YPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 932 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
++.++|-.|..+-+..+.|.+- .+-...+ +.... +.+++-+..+||..-.-. . .+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~--pG~~~----ee~r~hl~~~Gl~g~la~---~-si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF--PGKTE----EEIRRHLGSFGLSGELAL---Q-SIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhC--CCCCH----HHHHHHHHhcCCCchhhh---c-cccccCCc
Confidence 3468999998665544555432 2222222 22222 235677888888642211 1 15689999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||-||++|.....+|.+|+|||||+.||..+-..+-++|++. +..||+++|+-+. +-..|+.+.+.++|.-.-..|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999875 5689999999764 677899999998754444444
Q ss_pred C
Q 000787 1092 P 1092 (1286)
Q Consensus 1092 ~ 1092 (1286)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 3
No 177
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=346.26 Aligned_cols=218 Identities=26% Similarity=0.300 Sum_probs=180.8
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++.... ....+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~--------~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKTP--------FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCCc--------ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 678999988742110 11359999999999999999999999999999999999876 46899999998763
Q ss_pred h-------hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000787 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1286)
. ..+++.+|||+|++. .+...||+||+.|+.... ..+.++..++++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999863 233479999999875332 234455556789999999996 556655 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
.|||||||||+||++|+.+|++|||||||+|||+.++..+++.|++++++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 999999999987 57889999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999975
No 178
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-36 Score=330.89 Aligned_cols=201 Identities=29% Similarity=0.407 Sum_probs=168.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHH
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 45999999999999999999999999999999999999987 9999999988753 246799999998888889999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.++....+... ......++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988754322100 001123567888999987666554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec--CCe
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~ 402 (1286)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+.+|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999875433 4455557788888999999999999 799
Q ss_pred EEEEcChh
Q 000787 403 IVYQGPRE 410 (1286)
Q Consensus 403 iv~~G~~~ 410 (1286)
+++.++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988753
No 179
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4e-36 Score=334.02 Aligned_cols=204 Identities=22% Similarity=0.379 Sum_probs=171.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 14 KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 4999999999999999999999999999999999999998 9999999998754332 24699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 131 (232)
T cd03218 91 TVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKA----- 131 (232)
T ss_pred cHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 99999988643221100 001124567888999987666554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+|++|++|
T Consensus 132 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G 209 (232)
T cd03218 132 SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYEG 209 (232)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 445666778888999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+.+++.
T Consensus 210 ~i~~~~~~~~~~ 221 (232)
T cd03218 210 KVLAEGTPEEIA 221 (232)
T ss_pred eEEEEeCHHHhh
Confidence 999999988753
No 180
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=338.33 Aligned_cols=215 Identities=20% Similarity=0.259 Sum_probs=181.6
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +..|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 478899988773 2469999999999999999999999999999999999876 4579999999765
Q ss_pred Ch----------------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-c
Q 000787 935 KQ----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-Q 997 (1286)
Q Consensus 935 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~ 997 (1286)
.. ..+++.++|++|++.+++.+||+||+.+...... .....+.++++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 2345679999999999988999999987542111 123445566788999999997653 4
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCE
Q 000787 998 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1077 (1286)
Q Consensus 998 ~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~ 1077 (1286)
.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 43 4679999999999999999999999999999999999999999999999877999999999987 47778999
Q ss_pred EEEEecCcEEEEeCCC
Q 000787 1078 LFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1078 ~~lL~~gG~~~y~G~~ 1093 (1286)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 799999875
No 181
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=344.66 Aligned_cols=217 Identities=25% Similarity=0.347 Sum_probs=181.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++... ...+.+|+|||++|.+||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 57889998884210 011359999999999999999999999999999999999876 46899999998763
Q ss_pred h-------hcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000787 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1286)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1286)
. ..+++.+|||+|++ .+++ .||.|++.|+.... ..+.++.++++.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23466799999986 3444 69999999875432 234556667889999999996 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 679999999999999999999999999999999999999999999999877999999999986 47788999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999986
No 182
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=346.59 Aligned_cols=218 Identities=25% Similarity=0.309 Sum_probs=181.0
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 67889998874210 011358999999999999999999999999999999999876 35799999886531
Q ss_pred ---------------------------hhcccceEEEeccCC-CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH
Q 000787 936 ---------------------------QETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVM 987 (1286)
Q Consensus 936 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l 987 (1286)
....++.+|||+|++ ..+...||+|++.|+.... ..+.++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3344579999999875432 234556667889999
Q ss_pred HHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000787 988 ELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1066 (1286)
Q Consensus 988 ~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ 1066 (1286)
+.+||. +..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred CcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1067 PSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1067 ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
+. .+.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 47789999999985 799999986
No 183
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.7e-36 Score=344.59 Aligned_cols=204 Identities=26% Similarity=0.383 Sum_probs=175.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 16 ~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv 92 (301)
T TIGR03522 16 NALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYV 92 (301)
T ss_pred EEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999998875422 24679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.|.+++.+... .+....++.+++.+||++..++.+ +.
T Consensus 93 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 133 (301)
T TIGR03522 93 REYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKI-----GQ 133 (301)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCch-----hh
Confidence 999998765433110 001123567899999998877665 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||+||+++|++|||||||+|||+.++..+.+.|+++. .+ ++|+.++|..+++.++||+|++|++|++
T Consensus 134 LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~i 210 (301)
T TIGR03522 134 LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGKI 210 (301)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999873 34 5566688889999999999999999999
Q ss_pred EEEcChhHHHH
Q 000787 404 VYQGPRELVLE 414 (1286)
Q Consensus 404 v~~G~~~~~~~ 414 (1286)
++.|+.+++..
T Consensus 211 ~~~g~~~~~~~ 221 (301)
T TIGR03522 211 VADKKLDELSA 221 (301)
T ss_pred EEeCCHHHHHH
Confidence 99999998765
No 184
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-36 Score=336.63 Aligned_cols=214 Identities=27% Similarity=0.381 Sum_probs=181.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|+|+++++|+++||+||||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887763 2469999999999999999999999999999999999875 46899999998753
Q ss_pred h----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 936 Q----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
. ...++.++|++|++.+++.+||+||+.+...++. ..+.++.+..++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 1234679999999988888999999987643221 123344556788999999998766654 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 57889999999985 7999998
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 185
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.2e-36 Score=333.90 Aligned_cols=217 Identities=24% Similarity=0.279 Sum_probs=173.1
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++.. .....+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678888776311 001369999999999999999999999999999999999875 46899999998754
Q ss_pred h------hcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000787 936 Q------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1286)
. ..+++.++|++|++ .+.+.+||+||+.+....... ....+..+..++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 2 23456799999998 456789999999886543321 111111122236889999985 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999865 899999999986 46678999999985 7
Q ss_pred EEEEeC
Q 000787 1086 QEIYVG 1091 (1286)
Q Consensus 1086 ~~~y~G 1091 (1286)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 887654
No 186
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.3e-37 Score=319.61 Aligned_cols=202 Identities=24% Similarity=0.391 Sum_probs=186.4
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCH
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 958 (1286)
+++.+++||||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+.++. .+.++||.|.+.-+++.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCccCcH
Confidence 46789999999999999999999999999999999999887 5689999999998764 34568999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000787 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1286)
Q Consensus 959 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1286)
.|.|.|-|.|+. ++.++..+.++.+|+.+++....... ++.||.|++|++.+-.+++++|++++||||+|||
T Consensus 90 ~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 999999998874 56778888899999999999888776 4689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1039 D~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||.+.+.+.+.+.++.+.|.|||+++|+.+ .+-++||++++|++ |+.|..|+.
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999987 58899999999986 799999987
No 187
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3e-36 Score=330.60 Aligned_cols=206 Identities=24% Similarity=0.344 Sum_probs=174.0
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+++||++++|+++||+|||||||||||++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 5677877763 2469999999999999999999999999999999999875 468999999987531
Q ss_pred -----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 937 -----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 937 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
..+++.++|++|++.+++.+|++|++.+...... ....++..+.++++++.+++.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHH
Confidence 2345679999999988888999999988642111 123344456788999999998776665 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877999999999986 47788999999986 44
No 188
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.7e-36 Score=334.22 Aligned_cols=203 Identities=25% Similarity=0.367 Sum_probs=168.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCCCceeEEEEcCccCCCcc-----ccceEEEecCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL-----DPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|+++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 4999999999999999999999999999999999999 777 999999999875432 245799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
.++ .+||+||+.++....+.... .+....++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 777 89999999887543211000 00112356678899998765544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
+. +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . ++|+.++|+..++.+++|+|
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 20 357999999999999999999999999999999999999999999998754 2 55666788888999999999
Q ss_pred EEecCCeEEEEcChhH
Q 000787 396 ILLSDGQIVYQGPREL 411 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~ 411 (1286)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 189
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.3e-36 Score=336.09 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=178.5
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1286)
++++|+++.++ +..+|+|+|++|++||+++|+|+|||||||||++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788887763 235999999999999999999999999999999999987531 12799999998
Q ss_pred cCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCCC
Q 000787 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGLP 1003 (1286)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~~ 1003 (1286)
+... ...++.++|++|++.+++ .|++||+.+....+. ....++..+.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999998754331 123344556788999999997 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999876 489999999987 47788999999986
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 799999875
No 190
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.1e-36 Score=331.51 Aligned_cols=208 Identities=24% Similarity=0.312 Sum_probs=175.3
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ +++.+|+|+|++|++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788887762 12369999999999999999999999999999999999875 46899999998653
Q ss_pred hh------cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
.. .+++.++|++|++.+++.+|++|++.+....+ ....++..+.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 24567999999998888899999998865433 123344455688899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999877899999999987 47778999999986 564
No 191
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=342.95 Aligned_cols=216 Identities=26% Similarity=0.390 Sum_probs=182.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 588999998873 12469999999999999999999999999999999999876 4689999999876
Q ss_pred C-----hhcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000787 935 K-----QETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1286)
Q Consensus 935 ~-----~~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 1008 (1286)
. ...+++.+||++|++. .+...||+|++.+..... ..+.++..++++++++.++|.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 1234567999999974 234579999998864322 234445556789999999998877766 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
|||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999987 46678999999986 799
Q ss_pred EEeCCCC
Q 000787 1088 IYVGPLG 1094 (1286)
Q Consensus 1088 ~y~G~~~ 1094 (1286)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 192
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2e-36 Score=331.86 Aligned_cols=199 Identities=27% Similarity=0.421 Sum_probs=165.1
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCC--CCCCH
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTI 958 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 958 (1286)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999875 46899999997653 3456799999998763 34799
Q ss_pred HHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000787 959 YESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1286)
Q Consensus 959 ~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsg 1037 (1286)
+||+.+....... .....+..+++++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011223445688999999998776665 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1038 LD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999878999999999987 47788999999974 4 66654
No 193
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=347.83 Aligned_cols=218 Identities=25% Similarity=0.342 Sum_probs=181.4
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++... ...+.+|+|||++|++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 589999999885210 012359999999999999999999999999999999999876 4689999999765
Q ss_pred Ch-------------------hcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC
Q 000787 935 KQ-------------------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN 993 (1286)
Q Consensus 935 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~ 993 (1286)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467899999986 3444 59999998864322 234455556788999999996
Q ss_pred -cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000787 994 -PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1072 (1286)
Q Consensus 994 -~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~ 1072 (1286)
+..+.. +..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 4579999999999999999999999999999999999999999999999877999999999986 477
Q ss_pred HhcCEEEEEecCcEEEEeCCC
Q 000787 1073 EAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1073 ~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
+.+|++++|++ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 799999985
No 194
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3e-37 Score=313.83 Aligned_cols=210 Identities=22% Similarity=0.381 Sum_probs=181.1
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc----ceEEEecCCCCCC
Q 000787 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1286)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1286)
+++.+++|||+.+++||+++|+|||||||||.+.++.|+.+|+ +|+|.+||.+++.++.. .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4456999999999999999999999999999999999999999 99999999999887653 4589999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
-.+||+|||.-..+.+....+ ..+.+...+.+|+.|+|.++++..-
T Consensus 92 r~LtV~dNi~~vlE~~~~d~~--------------------------------~~~~~~~l~~LL~ef~i~hlr~~~a-- 137 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDLK--------------------------------KAERKEELDALLEEFHITHLRDSKA-- 137 (243)
T ss_pred hcCcHHHHHHHHHhhhhcchh--------------------------------HHHHHHHHHHHHHHhchHHHhcCcc--
Confidence 999999999876644321100 0112335778999999999988653
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..||||||+|+.|||||+.+|+.++||||++|+||.+..+|.+.++.+.. .+.-|+.+-|.-.|+...+||.+++
T Consensus 138 ---~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 138 ---YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred ---cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEE
Confidence 36999999999999999999999999999999999999999999998764 3555555788899999999999999
Q ss_pred cCCeEEEEcChhHHHH
Q 000787 399 SDGQIVYQGPRELVLE 414 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1286)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999998864
No 195
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.7e-36 Score=330.67 Aligned_cols=203 Identities=31% Similarity=0.443 Sum_probs=170.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1286)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 35999999999999999999999999999999999999998 999999999875321 2356999999988888999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.+..+..+.... +....++++++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPKS----------------------------------EIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 99999886543321100 01123566788999987776655 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998743 3 556667888888989999999999999
Q ss_pred EEEEcChhHH
Q 000787 403 IVYQGPRELV 412 (1286)
Q Consensus 403 iv~~G~~~~~ 412 (1286)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 196
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5.4e-36 Score=330.68 Aligned_cols=202 Identities=25% Similarity=0.415 Sum_probs=167.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 14 QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988755432 35699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHc-CCcccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1286)
||+||+.++....+ .. + ....++.+++.+ ++++..++.
T Consensus 91 t~~~~l~~~~~~~~--~~-----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~----- 129 (222)
T cd03224 91 TVEENLLLGAYARR--RA-----K-----------------------------RKARLERVYELFPRLKERRKQL----- 129 (222)
T ss_pred cHHHHHHHHhhhcC--ch-----h-----------------------------HHHHHHHHHHHHHhhhhhhhCc-----
Confidence 99999988653221 00 0 011233455666 466555544
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|++|++
T Consensus 130 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 130 AGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 446999999999999999999999999999999999999999999998754 3 45566677888899999999999999
Q ss_pred CeEEEEcChhHHH
Q 000787 401 GQIVYQGPRELVL 413 (1286)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1286)
|++++.|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (222)
T cd03224 208 GRVVLEGTAAELL 220 (222)
T ss_pred CeEEEeCCHHHHh
Confidence 9999999987653
No 197
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-36 Score=339.59 Aligned_cols=215 Identities=22% Similarity=0.340 Sum_probs=174.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCC-CCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD-NHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 241 (1286)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998864322 35799999986 367789
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+|||.|+....+... .+....++++++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 99999998754322110 011224567899999987666554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.... +++|+.++|+..++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999876533 44555567777777 589999999999
Q ss_pred eEEEEcChhHHHH---HHHhCCCCCC
Q 000787 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1286)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~~G~~cp 424 (1286)
+++..|+++++.+ .++..|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 217 QVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred EEEEECCHHHHHcChHHHHHcCCCCc
Confidence 9999999987653 2334455433
No 198
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.6e-36 Score=388.36 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=198.7
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.+..++|+.++++.++|. .........+....+++|+||++.++.
T Consensus 428 ~~~~~~~~~ri~~il~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~Y~~--------------------------- 475 (694)
T TIGR03375 428 YQQAKTALQSLDELMQLPVER-----PEGTRFLHRPRLQGEIEFRNVSFAYPG--------------------------- 475 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCCCccceEEEEEEEEEeCC---------------------------
Confidence 678889999999988876541 000000011112357999999999842
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
...++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 476 -----~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~ 547 (694)
T TIGR03375 476 -----QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQD 547 (694)
T ss_pred -----CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCC
Confidence 1124999999999999999999999999999999999999998 9999999999887654 5789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+|. .||+|||.++.. ....+.+.++++.. + .++. +-.|++..||
T Consensus 548 ~~lf~-~TI~eNi~~~~~----~~~~~~i~~a~~~~---~------------------------l~~~--i~~lp~gl~T 593 (694)
T TIGR03375 548 PRLFY-GTLRDNIALGAP----YADDEEILRAAELA---G------------------------VTEF--VRRHPDGLDM 593 (694)
T ss_pred hhhhh-hhHHHHHhCCCC----CCCHHHHHHHHHHc---C------------------------hHHH--HHhCcccccc
Confidence 76554 699999987631 11112222222111 0 1111 2247788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+. .||||||||++|||||+++|++++||||||+||+.++..|.+.|+++. .++|+|+ ++|.. ++.+.||+
T Consensus 594 ~i~e~G~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~ii-ItHrl-~~~~~~D~ 668 (694)
T TIGR03375 594 QIGERGR-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVL-VTHRT-SLLDLVDR 668 (694)
T ss_pred eecCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEE-EecCH-HHHHhCCE
Confidence 9998765 699999999999999999999999999999999999999999998764 3456655 44443 56789999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++++|+++++++
T Consensus 669 iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 669 IIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999875
No 199
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=336.95 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=177.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 488999998873 2369999999999999999999999999999999999876 4589999998764
Q ss_pred ChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
. ..++.++|++|++.+++.+||+||+.+... . ..++++.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~----~-----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK----G-----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc----c-----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 345679999999988888999999987421 0 1234678899999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|++||++|+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999987 47788999999985 799988764
No 200
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.3e-37 Score=352.85 Aligned_cols=257 Identities=22% Similarity=0.319 Sum_probs=198.3
Q ss_pred chHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhh
Q 000787 77 GLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1286)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1286)
..++...+..|+-++.+++++. .. +.-..+.+...++++||+|+++.
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~-----~~--~~~~~~~~~~~l~~~~vsF~y~~-------------------------- 348 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEV-----TF--PDEQTATTGQALELRNVSFTYPG-------------------------- 348 (573)
T ss_pred HhhHHHHHHHHHhhhccCCccc-----CC--CccccCCccceeeeccceeecCC--------------------------
Confidence 3556777888888888888772 11 11122222237999999999864
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecC
Q 000787 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1286)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1286)
++.++|+|+|+++++||.+||+|++|||||||+++|+|-++|+ +|+|+.||.++...+. ++.+++++|
T Consensus 349 ------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Q 419 (573)
T COG4987 349 ------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQ 419 (573)
T ss_pred ------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhcc
Confidence 1234999999999999999999999999999999999999999 9999999999877665 468999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
..|++..|+|+||.++.. +...+.+.++.++ .+ .++. ..+.+++.|
T Consensus 420 -r~hlF~~Tlr~NL~lA~~----~AsDEel~~aL~q---vg------------------------L~~l--~~~~p~gl~ 465 (573)
T COG4987 420 -RVHLFSGTLRDNLRLANP----DASDEELWAALQQ---VG------------------------LEKL--LESAPDGLN 465 (573)
T ss_pred -chHHHHHHHHHHHhhcCC----CCCHHHHHHHHHH---cC------------------------HHHH--HHhChhhhh
Confidence 467778899999988642 2222222222111 00 1111 123456778
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
|.+|+.+. .||||||||++|||+|++++++++|||||.|||+.|+.++++.|.+.+ .++|+++ ++|+... .+.||
T Consensus 466 t~lge~G~-~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~-vTHrL~~-le~~d 540 (573)
T COG4987 466 TWLGEGGR-RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLM-VTHRLRG-LERMD 540 (573)
T ss_pred chhccCCC-cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEE-Eeccccc-HhhcC
Confidence 99997654 699999999999999999999999999999999999999999998643 4566665 5555544 46799
Q ss_pred cEEEecCCeEEEEcChhHHHH
Q 000787 394 DIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|++|++|+++++|.+.++++
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999999875
No 201
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=338.06 Aligned_cols=203 Identities=26% Similarity=0.337 Sum_probs=169.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCC-CCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4999999999999999999999999999999999999998 9999999998764332 357999999863 45678
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.|+....+... .+....++++++.+||.+..+..+
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 99999998653221100 011124567889999987666554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.. . +.+|+.++|+..++.+++|+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 455666788888999999999999999
Q ss_pred eEEEEcChhHH
Q 000787 402 QIVYQGPRELV 412 (1286)
Q Consensus 402 ~iv~~G~~~~~ 412 (1286)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 202
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=8.3e-36 Score=329.34 Aligned_cols=208 Identities=25% Similarity=0.340 Sum_probs=177.6
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4667776653 2469999999999999999999999999999999999875 468999999987643
Q ss_pred hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 000787 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1286)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl 1016 (1286)
.. .+.++|++|++.+++.+|++|++.+....+. .. +..+.++++.+++.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2578999999988888999999987654331 11 235788999999988777653 57999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1017 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999877999999999987 47788999999985 7999999864
No 203
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.2e-36 Score=329.79 Aligned_cols=193 Identities=26% Similarity=0.380 Sum_probs=163.9
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 956 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 956 (1286)
+.+|+|+||++++|+++||+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999875 468999999986532 234567999999974 35678
Q ss_pred CHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000787 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1286)
Q Consensus 957 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTs 1036 (1286)
|++|++.+....+ .......++.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998865332 123334455688999999998776665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1037 gLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
|||+.++..+++.|++++++|+|||+++|++. ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 477789999999864
No 204
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-36 Score=343.19 Aligned_cols=217 Identities=22% Similarity=0.326 Sum_probs=180.4
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67889988874210 011359999999999999999999999999999999999876 46899999998763
Q ss_pred h-------hcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000787 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1286)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1286)
. ..+++.+|||+|++ .+++ .||.|++.|+.... ..+.++..++++++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23566899999986 3444 59999999875332 234455567789999999996 566654 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 67999999999999999999999999999999999999999999999975 4899999999987 47788999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799999985
No 205
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-36 Score=327.32 Aligned_cols=197 Identities=27% Similarity=0.415 Sum_probs=166.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+|
T Consensus 14 ~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 14 TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 4999999999999999999999999999999999999988 9999999987753 23467999999998889999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000787 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1286)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1286)
|+.+.....+... .+....++++++.+||++..++.+ ..||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (210)
T cd03269 90 QLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EELS 130 (210)
T ss_pred HHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhCC
Confidence 9988654322100 001123567888999987766554 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEE
Q 000787 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1286)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1286)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 131 KGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 9999999999999999999999999999999999999999998754 3 4556667888889999999999999999987
Q ss_pred Ec
Q 000787 406 QG 407 (1286)
Q Consensus 406 ~G 407 (1286)
.|
T Consensus 209 ~~ 210 (210)
T cd03269 209 YG 210 (210)
T ss_pred cC
Confidence 64
No 206
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-36 Score=333.99 Aligned_cols=213 Identities=30% Similarity=0.416 Sum_probs=171.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 15 KALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred EEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 4999999999999999999999999999999999999987 999999999876543 1357999999988899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.++..... . . .... .+.. .......++.+++.+||.+..++.
T Consensus 92 ~~tv~~~l~~~~~~~~-~-~---~~~~------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~---- 141 (241)
T cd03256 92 RLSVLENVLSGRLGRR-S-T---WRSL------FGLF---------------PKEEKQRALAALERVGLLDKAYQR---- 141 (241)
T ss_pred cCcHHHHHHhhhcccc-h-h---hhhh------cccC---------------cHHHHHHHHHHHHHcCChhhhCCC----
Confidence 9999999987642110 0 0 0000 0000 000122456788899998665544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|+|++|+
T Consensus 142 -~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l~ 219 (241)
T cd03256 142 -ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGLK 219 (241)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 45699999999999999999999999999999999999999999999876433 4456667888889999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+++++.
T Consensus 220 ~G~i~~~~~~~~~~ 233 (241)
T cd03256 220 DGRIVFDGPPAELT 233 (241)
T ss_pred CCEEEeecCHHHhh
Confidence 99999999988753
No 207
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-36 Score=333.15 Aligned_cols=205 Identities=28% Similarity=0.423 Sum_probs=170.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 15 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 15 KAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred eEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 4999999999999999999999999999999999999997 9999999988754332 357999999998999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc--cccccccccc
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV--CADTMVGDEM 320 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~~ 320 (1286)
|+||+.++.+..+... .+....+.++++.+||++ ..++ .
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~-----~ 132 (242)
T cd03295 92 VEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADR-----Y 132 (242)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----C
Confidence 9999988654322100 001123567788999975 4443 4
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|++|++
T Consensus 133 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~~ 211 (242)
T cd03295 133 PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMKN 211 (242)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999987653 245566677888889999999999999
Q ss_pred CeEEEEcChhHHH
Q 000787 401 GQIVYQGPRELVL 413 (1286)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1286)
|++++.|+++++.
T Consensus 212 G~i~~~~~~~~~~ 224 (242)
T cd03295 212 GEIVQVGTPDEIL 224 (242)
T ss_pred CEEEEecCHHHHH
Confidence 9999999987763
No 208
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-35 Score=336.88 Aligned_cols=206 Identities=21% Similarity=0.355 Sum_probs=171.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 21 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 97 (269)
T PRK11831 21 CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFT 97 (269)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCC
Confidence 4899999999999999999999999999999999999997 999999998875432 1356999999988889
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.+...... ... + ......+..+++.+||++..+..+
T Consensus 98 ~~tv~enl~~~~~~~~-~~~--------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 141 (269)
T PRK11831 98 DMNVFDNVAYPLREHT-QLP--------A------------------------PLLHSTVMMKLEAVGLRGAAKLMP--- 141 (269)
T ss_pred CCCHHHHHHHHHHHcc-CCC--------H------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999988642210 000 0 001123566788999987776654
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|++|+
T Consensus 142 --~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l~ 218 (269)
T PRK11831 142 --SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIVA 218 (269)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEEE
Confidence 469999999999999999999999999999999999999999999987643 24555667888899999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (269)
T PRK11831 219 DKKIVAHGSAQALQ 232 (269)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 209
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=344.17 Aligned_cols=218 Identities=22% Similarity=0.410 Sum_probs=174.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------------------ccc
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------------------VPQ 225 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 225 (1286)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 34999999999999999999999999999999999999998 99999999887532 124
Q ss_pred ceEEEecCCCC-CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHH
Q 000787 226 RTAAYISQHDN-HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1286)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1286)
+.++||+|++. .+...||+||+.|+....+.. . .+...+++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 67999999862 333469999998875322110 0 001124567888
Q ss_pred HcCCc-ccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 000787 305 VLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQ 383 (1286)
Q Consensus 305 ~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q 383 (1286)
.+||+ ...+ +.+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|
T Consensus 162 ~~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 3444 33457999999999999999999999999999999999999999999998753 3 455666788
Q ss_pred ChhhHHhhcCcEEEecCCeEEEEcChhHHHH---HHHhCCCCCCCC
Q 000787 384 PAPETYDLFDDIILLSDGQIVYQGPRELVLE---FFASMGFRCPKR 426 (1286)
Q Consensus 384 ~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~---~f~~~G~~cp~~ 426 (1286)
+..++.+.+|+|++|++|++++.|+++++.. .++..|+.+|..
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~ 280 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPRV 280 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCChH
Confidence 8888999999999999999999999988742 344556655543
No 210
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=334.51 Aligned_cols=212 Identities=22% Similarity=0.335 Sum_probs=178.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 378899988763 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Chh----cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCC
Q 000787 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lS 1009 (1286)
... ..++.++|++|++.+++.+||+||+.+..... ..++..+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 23567999999998888899999998864221 1222344567778887 466555543 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 58889999999986 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9986
No 211
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=341.85 Aligned_cols=216 Identities=24% Similarity=0.304 Sum_probs=182.8
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++.. ..+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37889999887421 12359999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ...++.+|||+|++. .++..||+||+.|+.... ..+.++.+++++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 234567999999973 567789999999875332 2345555677899999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~-~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE-V-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999863 5 67999999985 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 212
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.1e-35 Score=331.32 Aligned_cols=212 Identities=26% Similarity=0.381 Sum_probs=177.8
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 46778877763 2469999999999999999999999999999999999875 46899999998653
Q ss_pred h--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
. ....+.++|++|++.+++.+|++|++.+.+..+ ....++..+.++++++.++|.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 2 122357999999998888899999998765432 1233444566889999999987766653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 58999999999973 4 45999999985 78998887
Q ss_pred C
Q 000787 1093 L 1093 (1286)
Q Consensus 1093 ~ 1093 (1286)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 213
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.8e-36 Score=377.30 Aligned_cols=256 Identities=24% Similarity=0.370 Sum_probs=193.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++..+..+|+.++++.+++ ..+.. .........+++|+|+++.++.
T Consensus 304 ~~~~~~s~~ri~~ll~~~~~-----~~~~~-~~~~~~~~~~i~~~~v~f~y~~--------------------------- 350 (574)
T PRK11160 304 LGQVIASARRINEITEQKPE-----VTFPT-TSTAAADQVSLTLNNVSFTYPD--------------------------- 350 (574)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----CCCCc-ccCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 45667788888888776544 11100 0011122457999999999742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
.+.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|++||.++++... ++.++||+|+
T Consensus 351 -----~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~ 422 (574)
T PRK11160 351 -----QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQR 422 (574)
T ss_pred -----CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEccc
Confidence 1124899999999999999999999999999999999999998 9999999999887654 4679999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+| +.|++|||.++.. ....+.+.++.+.. + .++. .-. +++.||
T Consensus 423 ~~lf-~~ti~~Ni~~~~~----~~~~~~i~~al~~~---~------------------------l~~~--i~~-p~GldT 467 (574)
T PRK11160 423 VHLF-SATLRDNLLLAAP----NASDEALIEVLQQV---G------------------------LEKL--LED-DKGLNA 467 (574)
T ss_pred chhh-cccHHHHhhcCCC----ccCHHHHHHHHHHc---C------------------------CHHH--HcC-ccccCc
Confidence 7655 4699999988641 11112222211110 0 0111 123 677899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.||+.+. .||||||||++|||+++++|++|+|||||++||+.++..|.+.|++.. .++|+|++ +|.. +....+|+
T Consensus 468 ~vge~g~-~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviii-tHr~-~~~~~~d~ 542 (574)
T PRK11160 468 WLGEGGR-QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMI-THRL-TGLEQFDR 542 (574)
T ss_pred hhcCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEE-ecCh-hHHHhCCE
Confidence 9998754 699999999999999999999999999999999999999999998863 35566664 4443 34567999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|++++.|+++++++
T Consensus 543 i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 543 ICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999865
No 214
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.5e-36 Score=335.43 Aligned_cols=214 Identities=22% Similarity=0.303 Sum_probs=180.8
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ .+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35788887763 2469999999999999999999999999999999999876 46899999997653
Q ss_pred h----------------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccc
Q 000787 936 Q----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSL 999 (1286)
Q Consensus 936 ~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~ 999 (1286)
. ..+++.++|++|++.+++..|+.||+.+..... .....++..+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 1 124567999999999888999999998754221 1123444556788999999998777665
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEE
Q 000787 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1286)
Q Consensus 1000 ~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~ 1078 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999987 477889999
Q ss_pred EEEecCcEEEEeCCC
Q 000787 1079 FLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1079 ~lL~~gG~~~y~G~~ 1093 (1286)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799998875
No 215
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.2e-36 Score=351.75 Aligned_cols=208 Identities=26% Similarity=0.437 Sum_probs=174.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1286)
++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+|
T Consensus 17 ~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~t 93 (402)
T PRK09536 17 TVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFD 93 (402)
T ss_pred EEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 467999999998889999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.++..... + .. .. ...+....++++++.+||.+..++.+ +
T Consensus 94 v~e~v~~~~~~~~-~-~~---------------~~-------------~~~~~~~~v~~~le~vgl~~~~~~~~-----~ 138 (402)
T PRK09536 94 VRQVVEMGRTPHR-S-RF---------------DT-------------WTETDRAAVERAMERTGVAQFADRPV-----T 138 (402)
T ss_pred HHHHHHhccchhc-c-cc---------------cC-------------CCHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 9999998642110 0 00 00 00011235678899999987776554 5
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||.|||||+++|++|||||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++.+++|++++|++|+
T Consensus 139 ~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 139 SLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 34 456668889999999999999999999
Q ss_pred EEEEcChhHHH
Q 000787 403 IVYQGPRELVL 413 (1286)
Q Consensus 403 iv~~G~~~~~~ 413 (1286)
+++.|++++++
T Consensus 217 iv~~G~~~ev~ 227 (402)
T PRK09536 217 VRAAGPPADVL 227 (402)
T ss_pred EEEecCHHHHh
Confidence 99999998864
No 216
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-36 Score=342.49 Aligned_cols=205 Identities=26% Similarity=0.374 Sum_probs=169.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC-----------------------
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----------------------- 221 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------------- 221 (1286)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999998 9999999876421
Q ss_pred ----ccccceEEEecCCC-CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhH
Q 000787 222 ----FVPQRTAAYISQHD-NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEAN 296 (1286)
Q Consensus 222 ----~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~ 296 (1286)
...++.+|||+|++ ..++..||+|||.|+....+... ++..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 01235799999985 34556899999998764332110 0112
Q ss_pred HHHHHHHHHcCCc-ccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 000787 297 VITDYYLKVLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSG 375 (1286)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~ 375 (1286)
.+++++++.+||+ +..+. .+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~-----~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQR-----SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhC-----ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3466788999996 45554 4457999999999999999999999999999999999999999999998753 3 4
Q ss_pred eEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHH
Q 000787 376 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 376 t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
++|+.++|+.+++.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666888999999999999999999999999998874
No 217
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.3e-36 Score=329.81 Aligned_cols=195 Identities=29% Similarity=0.415 Sum_probs=161.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1286)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 45999999999999999999999999999999999999998 9999999998765431 3579999999989
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++.+||+||+.++....+... ......++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998754332100 001123567888999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++. .+|++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEE
Confidence 4699999999999999999999999999999999999999999999876423 445555677777775 9999999
Q ss_pred ecCCeE
Q 000787 398 LSDGQI 403 (1286)
Q Consensus 398 L~~G~i 403 (1286)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 218
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=7.5e-36 Score=329.29 Aligned_cols=211 Identities=25% Similarity=0.334 Sum_probs=173.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++.. ...+.+|+|+|++|++|++++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5678888776321 012469999999999999999999999999999999999876 46899999998753
Q ss_pred hh---c---cc-ceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 000787 936 QE---T---FA-RISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1286)
Q Consensus 936 ~~---~---~~-~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 1008 (1286)
.. . ++ +.++|++|++.+++.+|++|++.+....+. ....+..+++.++++.+++.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 22 569999999988888999999988654331 223334456789999999987766653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1009 SgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
|||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~-~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLEL-A-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 8999999999863 4 55799999986 665
Q ss_pred E
Q 000787 1088 I 1088 (1286)
Q Consensus 1088 ~ 1088 (1286)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 219
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=336.70 Aligned_cols=218 Identities=22% Similarity=0.267 Sum_probs=180.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 478889988763 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Chh---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC----------CCC--CHHHHHHHHHHHHHHcCCCccccc
Q 000787 935 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLS----------PEV--DSETRKMFIDEVMELVELNPLRQS 998 (1286)
Q Consensus 935 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~----------~~~--~~~~~~~~v~~~l~~l~l~~~~~~ 998 (1286)
... . .+..++|++|++.+++.+||+||+.++...... ... ...+..+.++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999986432110 000 112234567889999999877766
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCE
Q 000787 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1077 (1286)
Q Consensus 999 ~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~ 1077 (1286)
. +..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999999775 899999999987 57788999
Q ss_pred EEEEecCcEEEEeCCCC
Q 000787 1078 LFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1078 ~~lL~~gG~~~y~G~~~ 1094 (1286)
+++|++ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999985 7999998863
No 220
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=329.35 Aligned_cols=201 Identities=25% Similarity=0.346 Sum_probs=165.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1286)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 35999999999999999999999999999999999999988 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++.+||+||+.+.....+... .+....++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999998654321100 001124567889999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
..||||||||++||++++.+|+++||||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQ-GTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHHh-hCEEEE
Confidence 4699999999999999999999999999999999999999999999875433 4555557777777765 589999
Q ss_pred ecCCeEEEEcCh
Q 000787 398 LSDGQIVYQGPR 409 (1286)
Q Consensus 398 L~~G~iv~~G~~ 409 (1286)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 221
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=333.24 Aligned_cols=216 Identities=24% Similarity=0.280 Sum_probs=179.0
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1286)
++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887763 246999999999999999999999999999999999986531 36899999998
Q ss_pred cCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc----cccccCCCCC
Q 000787 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL----RQSLVGLPGV 1005 (1286)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~~g~~~~ 1005 (1286)
++.. ..+++.+||++|++.+++.+||+||+.+....+.. ....++..+.++++++.++|.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7532 23456799999999888899999999986533211 11233445678899999998642 3333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
..||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999864 899999999987 47788999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 99999875
No 222
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-36 Score=337.79 Aligned_cols=208 Identities=25% Similarity=0.342 Sum_probs=174.3
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCC
Q 000787 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1286)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1286)
....+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3456999999999999999999999999999999999999998 9999999988754321 24699999999
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
.+++.+||+||+.+.....+... ......++++++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 88989999999998754322100 00112356788999998777665
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
+ ..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.+++|+|
T Consensus 158 ~-----~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 P-----DELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAEL-QKTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred c-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEE
Confidence 5 4699999999999999999999999999999999999999999999876533 445556778888999999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000787 396 ILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1286)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 223
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=332.79 Aligned_cols=213 Identities=23% Similarity=0.316 Sum_probs=179.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67888887763 2469999999999999999999999999999999999876 46899999998642
Q ss_pred ---------hhcccceEEEeccCCCCCCCCCHHHHHHHHH-hhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000787 936 ---------QETFARISGYCEQNDIHSPFVTIYESLLFSA-WLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1286)
Q Consensus 936 ---------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a-~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1286)
....++.++|++|++.+++.+||.||+.+.. ... .....+..+.+.++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 1123567999999999999999999997532 221 1233344567889999999987777653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999987 46778999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99999875
No 224
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-36 Score=315.87 Aligned_cols=213 Identities=26% Similarity=0.401 Sum_probs=177.6
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5677776655 34689999999999999999999999999999999999876 34899999999875
Q ss_pred h----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCH
Q 000787 936 Q----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~lSg 1010 (1286)
. ...++-++||||-...|+.+||+|||..++..+.. ++..+..++++.+.+- |.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 4 23566799999999999999999999998755432 1111222667777664 4555555543 6999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||.|+|||||+++|++|+|||||.||-|.-...|.++|+++.++ |.||+.+-+.-. ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999866 779999988765 47789999999985 89999
Q ss_pred eCCCC
Q 000787 1090 VGPLG 1094 (1286)
Q Consensus 1090 ~G~~~ 1094 (1286)
.|+..
T Consensus 218 ~G~~~ 222 (237)
T COG0410 218 SGTAA 222 (237)
T ss_pred ecCHH
Confidence 99863
No 225
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.3e-35 Score=332.40 Aligned_cols=219 Identities=23% Similarity=0.254 Sum_probs=176.7
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35678877763 24699999999999999999999999999999999997411146899999998754
Q ss_pred hh---cc-cceEEEeccCCCCCCCCCHHHHHHHHHhhhcC--C--CCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000787 936 QE---TF-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~~---~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~--~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1286)
.. .. +..++|++|++.+++.+|++|++.+....... . ..+.++..+.++++++.++|. ++.+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 21 22 23489999999999999999999876432211 0 112233456788999999997 45554421 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~-~D~~~lL~~gG 1085 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877999999999986 46666 799999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 99999875
No 226
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.1e-36 Score=379.18 Aligned_cols=257 Identities=22% Similarity=0.366 Sum_probs=193.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.+...+|+.++.+.+++. ..+....+.+..+|+++||++.++.
T Consensus 308 ~~~~~~~~~ri~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 353 (582)
T PRK11176 308 FQRGMAACQTLFAILDLEQEK-------DEGKRVIERAKGDIEFRNVTFTYPG--------------------------- 353 (582)
T ss_pred HHHHHHHHHHHHHHhcCCCcC-------CCCCcCCCCCCCeEEEEEEEEecCC---------------------------
Confidence 455666777777766544330 0011111222346999999998742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
...++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 354 -----~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 425 (582)
T PRK11176 354 -----KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQN 425 (582)
T ss_pred -----CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccC
Confidence 1134999999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+|+ .|++|||.++..- ....+.+.++++.. + .++.+ -.|+++.||
T Consensus 426 ~~lf~-~Ti~~Ni~~~~~~---~~~~~~i~~al~~~---~------------------------l~~~i--~~lp~Gldt 472 (582)
T PRK11176 426 VHLFN-DTIANNIAYARTE---QYSREQIEEAARMA---Y------------------------AMDFI--NKMDNGLDT 472 (582)
T ss_pred ceeec-chHHHHHhcCCCC---CCCHHHHHHHHHHh---C------------------------cHHHH--HhcccccCc
Confidence 76665 7999999876310 01112222222111 0 11122 236788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+ +.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .++|+|+ ++|.. +..+.||+
T Consensus 473 ~ig~~g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~ 547 (582)
T PRK11176 473 VIGENG-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADE 547 (582)
T ss_pred eeCCCC-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCE
Confidence 999876 4699999999999999999999999999999999999999999998753 3456555 44443 67788999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++++|+++++.+
T Consensus 548 Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 548 ILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred EEEEECCEEEEeCCHHHHHh
Confidence 99999999999999998864
No 227
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-35 Score=344.71 Aligned_cols=229 Identities=21% Similarity=0.233 Sum_probs=185.4
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
-++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 47889998877532110000000123579999999999999999999999999999999999876 4589999999876
Q ss_pred Chh------cccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000787 935 KQE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1286)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1286)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++.++++.++++.++|. ...+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 421 2456799999997 57889999999988644321 1235566677889999999995 345554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
..||||||||++||+||+.+|++|+|||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999987 47778999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 228
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.4e-36 Score=376.14 Aligned_cols=253 Identities=19% Similarity=0.229 Sum_probs=195.2
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.....+|+.++++.+++. . +....+....+++|+|+++.++.
T Consensus 308 ~~~~~~s~~ri~~~l~~~~~~------~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 352 (592)
T PRK10790 308 LQQAVVAGERVFELMDGPRQQ------Y--GNDDRPLQSGRIDIDNVSFAYRD--------------------------- 352 (592)
T ss_pred HHHHHHHHHHHHHHhcCCCcc------C--CCCccCCCCCeEEEEEEEEEeCC---------------------------
Confidence 467778888888887654431 0 00011112346999999998742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
+ .++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|+
T Consensus 353 ---~---~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~ 423 (592)
T PRK10790 353 ---D---NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQD 423 (592)
T ss_pred ---C---CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 23999999999999999999999999999999999999998 9999999999887654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+|+ .|++|||.++.. ...+.+.++++. .+ .++.++ .|+++.||
T Consensus 424 ~~lF~-~Ti~~NI~~~~~-----~~d~~i~~a~~~---~g------------------------l~~~i~--~lp~Gldt 468 (592)
T PRK10790 424 PVVLA-DTFLANVTLGRD-----ISEEQVWQALET---VQ------------------------LAELAR--SLPDGLYT 468 (592)
T ss_pred Ccccc-chHHHHHHhCCC-----CCHHHHHHHHHH---cC------------------------cHHHHH--hccccccc
Confidence 87766 599999998631 111222222211 11 111222 26778899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+. .||||||||++|||||+++|+|++||||||+||+.++..|.+.|+++. .++|+|++. |.. +....+|+
T Consensus 469 ~i~e~g~-~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIivt-Hr~-~~l~~~D~ 543 (592)
T PRK10790 469 PLGEQGN-NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVIA-HRL-STIVEADT 543 (592)
T ss_pred cccCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEEe-cch-HHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998763 346666644 433 66778999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++..|+++++++
T Consensus 544 ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 544 ILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999864
No 229
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.9e-35 Score=329.27 Aligned_cols=205 Identities=26% Similarity=0.381 Sum_probs=169.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc--cceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP--QRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lTV 243 (1286)
.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+||
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 15 RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 4999999999999999999999999999999999999998 9999999988754322 2579999999888899999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.+.....+... .+....++++++.+||++..++.+ ..
T Consensus 92 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 132 (236)
T TIGR03864 92 RQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKV-----RE 132 (236)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hh
Confidence 999987653321100 001123566788999987766555 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++++..+ ++|+.++|+..++. .+|+|++|++|++
T Consensus 133 LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~-~~d~i~~l~~G~i 210 (236)
T TIGR03864 133 LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQG-LSVLWATHLVDEIE-ADDRLVVLHRGRV 210 (236)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecChhhHh-hCCEEEEEeCCeE
Confidence 999999999999999999999999999999999999999999998764334 44555777777775 4999999999999
Q ss_pred EEEcChhHHHH
Q 000787 404 VYQGPRELVLE 414 (1286)
Q Consensus 404 v~~G~~~~~~~ 414 (1286)
++.|+++++.+
T Consensus 211 ~~~~~~~~~~~ 221 (236)
T TIGR03864 211 LADGAAAELRG 221 (236)
T ss_pred EEeCCHHHHHH
Confidence 99999887654
No 230
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-36 Score=341.29 Aligned_cols=218 Identities=24% Similarity=0.295 Sum_probs=180.3
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++... ...+.+|+|||+++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888888774110 001359999999999999999999999999999999999876 46899999998753
Q ss_pred h-------hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000787 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1286)
. ...++.+||++|++. .+..+||.|++.|..... ....++..++++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 2 234567999999963 233579999998865332 234455566789999999997 566665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.||++++|++ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999987 47889999999986 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13641 223 LIKHASP 229 (287)
T ss_pred EEEeCCH
Confidence 9999875
No 231
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=333.99 Aligned_cols=215 Identities=21% Similarity=0.237 Sum_probs=177.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+||||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988773 235899999999999999999999999999999999986531 2479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 1002 (1286)
.++.. ..+++.++|++|++.+++ +||+||+.|....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999987774 899999998754321 112333456688899998874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999996 4799999999997 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 232
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=339.43 Aligned_cols=207 Identities=21% Similarity=0.315 Sum_probs=169.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc-------ccceEEEecCCCC-
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN- 236 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1286)
..+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 34999999999999999999999999999999999999998 999999999875421 2467999999852
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1286)
.+...||+||+.|+....+... .+....++++++.+||. +..++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334699999998753221100 01122456788899996 455543
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.+.+|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4579999999999999999999999999999999999999999999987543 3556666888889999999999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000787 396 ILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1286)
++|++|++++.|+++++.+
T Consensus 217 ~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999987643
No 233
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.6e-36 Score=387.70 Aligned_cols=261 Identities=22% Similarity=0.275 Sum_probs=196.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCC-CCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI-DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1286)
.++....++|+.++++.++|.-......+...... +.....++|+||++.++.
T Consensus 436 ~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~-------------------------- 489 (710)
T TIGR03796 436 LQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSP-------------------------- 489 (710)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCC--------------------------
Confidence 56788889999988877655210000000000000 112357999999999842
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecC
Q 000787 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1286)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1286)
...++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|
T Consensus 490 ------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q 560 (710)
T TIGR03796 490 ------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQ 560 (710)
T ss_pred ------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEec
Confidence 1134999999999999999999999999999999999999998 9999999999877654 578999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
++.+| +.|++|||.++. +....+.+.++++.. + .++. +..|+.+.|
T Consensus 561 ~~~lf-~gTi~eNi~l~~----~~~~~~~i~~al~~~---~------------------------l~~~--i~~lp~gl~ 606 (710)
T TIGR03796 561 DIFLF-EGTVRDNLTLWD----PTIPDADLVRACKDA---A------------------------IHDV--ITSRPGGYD 606 (710)
T ss_pred CChhh-hccHHHHhhCCC----CCCCHHHHHHHHHHh---C------------------------CHHH--HHhCcCccc
Confidence 87655 579999998752 111222222222211 1 1111 224677889
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
|.+|+.+ .+||||||||++|||||+++|++|+||||||+||+.++..|.+.|++ .++|+|+ ++|.. ++...+|
T Consensus 607 t~i~e~G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D 679 (710)
T TIGR03796 607 AELAEGG-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCD 679 (710)
T ss_pred ceeccCC-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCC
Confidence 9999876 47999999999999999999999999999999999999999999975 3456655 45543 5667799
Q ss_pred cEEEecCCeEEEEcChhHHHH
Q 000787 394 DIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|++|++|+++++|+++++++
T Consensus 680 ~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 680 EIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred EEEEEeCCEEEEecCHHHHHH
Confidence 999999999999999999875
No 234
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=335.35 Aligned_cols=213 Identities=25% Similarity=0.358 Sum_probs=179.4
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 57788887763 2469999999999999999999999999999999999865 46899999998653
Q ss_pred h---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000787 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 1012 (1286)
. ...++.++|++|++.+++.+||+|++.+..... ....++.++.++++++.+++.+..+..+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 234467999999988878899999998864221 1122333456889999999987777663 5799999
Q ss_pred HHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1013 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1013 rqrl~ia~~L~------~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~-~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
|||++||++|+ .+|++|+|||||+|||+.++..+++.|++++ ++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999997 67999999999986 47789999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 99998875
No 235
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=7.6e-36 Score=334.12 Aligned_cols=212 Identities=27% Similarity=0.379 Sum_probs=170.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 16 QALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 4999999999999999999999999999999999999987 999999998875432 2457999999988899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.++..... ... .... +. ........++++++.+||.+..+..
T Consensus 93 ~~tv~~~l~~~~~~~~--~~~---~~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~---- 142 (243)
T TIGR02315 93 RLTVLENVLHGRLGYK--PTW---RSLL------GR---------------FSEEDKERALSALERVGLADKAYQR---- 142 (243)
T ss_pred cccHHHHHhhcccccc--cch---hhhh------cc---------------ccHHHHHHHHHHHHHcCcHhhhcCC----
Confidence 9999999987532100 000 0000 00 0001123456788999998766544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|+..++.+++|+|++|+
T Consensus 143 -~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l~ 220 (243)
T TIGR02315 143 -ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGLK 220 (243)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEE
Confidence 45699999999999999999999999999999999999999999999876533 4456667888888999999999999
Q ss_pred CCeEEEEcChhHH
Q 000787 400 DGQIVYQGPRELV 412 (1286)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1286)
+|++++.|+++++
T Consensus 221 ~G~i~~~~~~~~~ 233 (243)
T TIGR02315 221 AGEIVFDGAPSEL 233 (243)
T ss_pred CCEEEecCCHHHh
Confidence 9999999998765
No 236
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.7e-36 Score=407.75 Aligned_cols=263 Identities=21% Similarity=0.291 Sum_probs=200.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCC-----CCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHH
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI-----DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDIL 152 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 152 (1286)
.+.+++..+|+.++++..++ +..+ +.-+. +....+|+|+||+|.|..
T Consensus 1126 ~~~a~~a~~ri~~ll~~~~~-----~~~~-~~~~~~~~~~~~~~g~I~f~nVsF~Y~~---------------------- 1177 (1466)
T PTZ00265 1126 SENAKLSFEKYYPLIIRKSN-----IDVR-DNGGIRIKNKNDIKGKIEIMDVNFRYIS---------------------- 1177 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCCc-----CCCC-CCcccccccCCCCCceEEEEEEEEECCC----------------------
Confidence 56778888888888876542 1000 00111 112357999999999842
Q ss_pred hHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---------------------------
Q 000787 153 NYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--------------------------- 205 (1286)
Q Consensus 153 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------- 205 (1286)
+ +..+||+|+|++|+||+.+||+||||||||||+++|.|+++|+
T Consensus 1178 --------~-~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 (1466)
T PTZ00265 1178 --------R-PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQ 1248 (1466)
T ss_pred --------C-CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence 1 1235999999999999999999999999999999999999981
Q ss_pred ------------------------CCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCc
Q 000787 206 ------------------------LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 258 (1286)
Q Consensus 206 ------------------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~ 258 (1286)
...+|+|++||+++++... ++.++||+|++.+| +.||||||.|+.. ..
T Consensus 1249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~----~a 1323 (1466)
T PTZ00265 1249 NVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE----DA 1323 (1466)
T ss_pred ccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC----CC
Confidence 0138999999999987654 57899999987665 6899999999742 12
Q ss_pred hhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHH
Q 000787 259 RYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMM 338 (1286)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al 338 (1286)
..+.+.++++.... ++. +..|++++||.||+.+. .||||||||++|||||
T Consensus 1324 t~eeI~~A~k~A~l---------------------------~~f--I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARAL 1373 (1466)
T PTZ00265 1324 TREDVKRACKFAAI---------------------------DEF--IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARAL 1373 (1466)
T ss_pred CHHHHHHHHHHcCC---------------------------HHH--HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHH
Confidence 22333333332211 111 23689999999998765 5999999999999999
Q ss_pred hcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC----CeEE-EEcChhHHH
Q 000787 339 VGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD----GQIV-YQGPRELVL 413 (1286)
Q Consensus 339 ~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~----G~iv-~~G~~~~~~ 413 (1286)
+++|+||+||||||+||+.++..|.+.|+++....++|+|+ +.|. .++.+.||+|++|++ |+++ ++|++++++
T Consensus 1374 lr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHR-lsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1374 LREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHR-IASIKRSDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEE-Eech-HHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 99999999999999999999999999998864223456555 4444 467788999999999 9955 899999986
Q ss_pred H
Q 000787 414 E 414 (1286)
Q Consensus 414 ~ 414 (1286)
+
T Consensus 1452 ~ 1452 (1466)
T PTZ00265 1452 S 1452 (1466)
T ss_pred h
Confidence 4
No 237
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.5e-36 Score=387.49 Aligned_cols=257 Identities=24% Similarity=0.307 Sum_probs=197.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.+..++|+.++++.++|. .+..+....+....+|+|+||++.++.
T Consensus 438 ~~~~~~~~~ri~~~l~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~y~~--------------------------- 485 (708)
T TIGR01193 438 LQAARVANNRLNEVYLVDSEF-----INKKKRTELNNLNGDIVINDVSYSYGY--------------------------- 485 (708)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cccccccCCCCCCCcEEEEEEEEEcCC---------------------------
Confidence 567788889998888766551 100000111223457999999999841
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
..++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|+
T Consensus 486 ------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 556 (708)
T TIGR01193 486 ------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQE 556 (708)
T ss_pred ------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecC
Confidence 124999999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+| +.||+|||.++.+. ....+.+.++++.. + .++. +..|+.+.||
T Consensus 557 ~~lf-~gTI~eNi~l~~~~---~~~~~~i~~a~~~a---~------------------------l~~~--i~~lp~gldt 603 (708)
T TIGR01193 557 PYIF-SGSILENLLLGAKE---NVSQDEIWAACEIA---E------------------------IKDD--IENMPLGYQT 603 (708)
T ss_pred ceeh-hHHHHHHHhccCCC---CCCHHHHHHHHHHh---C------------------------CHHH--HHhcccccCc
Confidence 7665 56999999986311 11122222222211 0 1111 2247788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.||+.+ .+||||||||++||||++++|++|+||||||+||+.++..+.+.|+++ .++|+|+ ++|.. ++...+|+
T Consensus 604 ~i~e~G-~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~ 677 (708)
T TIGR01193 604 ELSEEG-SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDK 677 (708)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCE
Confidence 999865 469999999999999999999999999999999999999999999863 3456555 55544 56788999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|++++.|+++++++
T Consensus 678 i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 678 IIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999865
No 238
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=339.38 Aligned_cols=213 Identities=23% Similarity=0.320 Sum_probs=179.6
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ +++.+|+||||+|++||++||+|||||||||||++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56778877763 12359999999999999999999999999999999999876 46899999998764
Q ss_pred h----hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 936 Q----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
. ...++.+||++|++. .+...|+.||+.|..... ..+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999975 356689999998865332 2344555567899999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||++||+||+.+|+||||||||+|||+.++..+++.|+++.++|+|||+++|++. ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999987 35 67999999986 799999
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 985
No 239
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=333.40 Aligned_cols=217 Identities=24% Similarity=0.265 Sum_probs=179.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 377889988773 246999999999999999999999999999999999986532 3589999999
Q ss_pred ccCC-----hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....++..+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8753 123456799999999999899999999886543211 1123344556888999999853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 799999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 799999885
No 240
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.7e-35 Score=343.25 Aligned_cols=208 Identities=23% Similarity=0.246 Sum_probs=173.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCC--C
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1286)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999987 9999999998865432 35799999986 5
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1286)
+++.+||.||+.+..+....+.. ..+....++++++.+||. +..+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~~--------------------------------~~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKLS--------------------------------RQEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCCC--------------------------------HHHHHHHHHHHHHHcCCChHHhc--
Confidence 78899999999986543210000 001123456788999994 3344
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
+.+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 445679999999999999999999999999999999999999999999987653 3556677899999999999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000787 396 ILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1286)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 241
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1e-35 Score=325.02 Aligned_cols=194 Identities=26% Similarity=0.397 Sum_probs=164.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-cccceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-VPQRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+||+
T Consensus 14 ~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 14 RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 4999999999999999999999999999999999999988 99999999877542 1235799999998889999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.+.....+. ....++++++.+||++..++.+ ..|
T Consensus 91 e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (208)
T cd03268 91 ENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KGF 127 (208)
T ss_pred HHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hhC
Confidence 999886532110 0113456788899987666544 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+ .+|+.++|+..++.+++|++++|++|+++
T Consensus 128 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~i~ 205 (208)
T cd03268 128 SLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGKLI 205 (208)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 34 45555778888999999999999999998
Q ss_pred EEc
Q 000787 405 YQG 407 (1286)
Q Consensus 405 ~~G 407 (1286)
+.|
T Consensus 206 ~~g 208 (208)
T cd03268 206 EEG 208 (208)
T ss_pred ecC
Confidence 765
No 242
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=338.35 Aligned_cols=214 Identities=25% Similarity=0.366 Sum_probs=181.0
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++. ++.+|+||||++++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 678888887731 2358999999999999999999999999999999999876 46899999998754
Q ss_pred h---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 936 Q---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
. ...++.+|||+|++. .+...||.|++.+..... ..+.+...++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 2 234567899999973 334579999998765322 2344455567899999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999775 899999999987 57789999999986 799999
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 986
No 243
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.2e-35 Score=327.01 Aligned_cols=198 Identities=31% Similarity=0.454 Sum_probs=166.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc--cccceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 243 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999998 99999999887542 124679999999988899999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.+.....+... .+....++++++.+||++..+..+ ..
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987643321100 011224567889999987666544 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 44566678888899999999999999999
Q ss_pred EEEc
Q 000787 404 VYQG 407 (1286)
Q Consensus 404 v~~G 407 (1286)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 244
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=333.68 Aligned_cols=214 Identities=24% Similarity=0.292 Sum_probs=177.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1286)
.++++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588899988763 24699999999999999999999999999999999998652 13589999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.++.. ..+++.++|++|++.+++ +|++||+.|....+ ..+.+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 234567999999988877 89999999875432 1233444556888999999843 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 899999999986 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 245
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=336.70 Aligned_cols=215 Identities=27% Similarity=0.403 Sum_probs=174.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCC-CCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD-NHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 241 (1286)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998865432 35799999986 367778
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+|||.++....+... .+....++++++.+||++..++.+
T Consensus 98 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13635 98 TVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREP----- 138 (279)
T ss_pred cHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----
Confidence 99999998654321100 011224677889999987766554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++. .+|+|++|++|
T Consensus 139 ~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~~~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 139 HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE-QKGITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 33455555677777775 59999999999
Q ss_pred eEEEEcChhHHHH---HHHhCCCCCC
Q 000787 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1286)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~~G~~cp 424 (1286)
++++.|+.+++.. .+...|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 217 EILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred EEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 9999999988753 3444455443
No 246
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-35 Score=329.85 Aligned_cols=204 Identities=21% Similarity=0.353 Sum_probs=170.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc-----ccceEEEecCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHIGE 240 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~~ 240 (1286)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 15 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 15 QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 4999999999999999999999999999999999999988 999999999875421 23579999999888899
Q ss_pred CCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
+||+||+.|+.. ..+... .+....++++++.+||++..+..+
T Consensus 92 ~tv~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 134 (240)
T PRK09493 92 LTALENVMFGPLRVRGASK----------------------------------EEAEKQARELLAKVGLAERAHHYP--- 134 (240)
T ss_pred CcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChHHHhcCh---
Confidence 999999988642 111000 001123567888999986666544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.. . +++|+.++|+.+++.+++|+|++|+
T Consensus 135 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 210 (240)
T PRK09493 135 --SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFID 210 (240)
T ss_pred --hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 56999999999999999999999999999999999999999999998753 3 4455667788889999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (240)
T PRK09493 211 KGRIAEDGDPQVLI 224 (240)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 247
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.4e-36 Score=384.78 Aligned_cols=256 Identities=22% Similarity=0.339 Sum_probs=191.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.....+|+.+.++.+++. .+. .....+.....|+|+||++.++..
T Consensus 444 ~~~~~~a~~ri~~~l~~~~~~-----~~~-~~~~~~~~~~~I~~~nVsf~Y~~~-------------------------- 491 (711)
T TIGR00958 444 MMQAVGASEKVFEYLDRKPNI-----PLT-GTLAPLNLEGLIEFQDVSFSYPNR-------------------------- 491 (711)
T ss_pred HHHHHHHHHHHHHHhCCCCCC-----CCC-CCCCCCCCCCeEEEEEEEEECCCC--------------------------
Confidence 567777888888887765441 000 000001123469999999998421
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
+++++|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 492 -----~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 563 (711)
T TIGR00958 492 -----PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQE 563 (711)
T ss_pred -----CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecC
Confidence 1235999999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+| +.||||||.++.. ....+.+.++++. .+ .++.+ -.|+++.||
T Consensus 564 ~~lF-~gTIreNI~~g~~----~~~~e~i~~al~~---a~------------------------l~~~i--~~lp~GldT 609 (711)
T TIGR00958 564 PVLF-SGSVRENIAYGLT----DTPDEEIMAAAKA---AN------------------------AHDFI--MEFPNGYDT 609 (711)
T ss_pred cccc-ccCHHHHHhcCCC----CCCHHHHHHHHHH---cC------------------------CHHHH--HhCCCccCC
Confidence 7655 5799999998642 1111222222211 11 11112 236778899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+. .||||||||++||||++++|+|++||||||+||+.++..|.+ ... ..++|+|+ ++|.. ++.+.+|+
T Consensus 610 ~ige~G~-~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD~ 682 (711)
T TIGR00958 610 EVGEKGS-QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERADQ 682 (711)
T ss_pred cccCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999988 321 23455555 55554 56678999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+|+++|+++++++
T Consensus 683 IivL~~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 683 ILVLKKGSVVEMGTHKQLME 702 (711)
T ss_pred EEEEECCEEEEeeCHHHHHh
Confidence 99999999999999999875
No 248
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-35 Score=342.26 Aligned_cols=214 Identities=21% Similarity=0.239 Sum_probs=175.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCC--
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD-- 235 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1286)
..+|+||||+|++||+++|+|+||||||||+++|+|+++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 459999999999999999999999999999999999998742238999999998865432 14799999997
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
.+.+.+||.+++.+......... ..+....+.++|+.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMS---------------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 67899999999987643321000 00112345677889999764332
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
+ ++.+.+|||||||||+||+||+.+|++||+||||+|||..++.+|.+.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3567789999999999999999999999999999999999999999999988653 3566777889999999999999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000787 396 ILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1286)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998753
No 249
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-35 Score=331.17 Aligned_cols=215 Identities=25% Similarity=0.315 Sum_probs=178.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ .+.+|+|+||+|++||+++|+|+|||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56788877663 2469999999999999999999999999999999999865 46899999998754
Q ss_pred hh----cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC--C---CCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P---EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~--~---~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.. ..++.++|++|++.+++.+||+||+.+....... . ....++.+++++++++.+++.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 21 1234699999999999999999999886432100 0 011233456789999999998777665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 799999999987 47788999999986 78
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 9998875
No 250
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=321.84 Aligned_cols=195 Identities=41% Similarity=0.733 Sum_probs=166.5
Q ss_pred EEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHH
Q 000787 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1286)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1286)
.+.|+||++.++.. +..+.+|+|+|+.+++|++++|+|||||||||||++
T Consensus 3 ~~~~~~~~~~~~~~------------------------------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~ 52 (202)
T cd03233 3 TLSWRNISFTTGKG------------------------------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKA 52 (202)
T ss_pred eEEEEccEEEeccC------------------------------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHH
Confidence 47899999998641 133469999999999999999999999999999999
Q ss_pred HhCCCC---CCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHh
Q 000787 198 LAGKLD---PTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKA 272 (1286)
Q Consensus 198 L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 272 (1286)
|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++.+..
T Consensus 53 l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~------------------ 111 (202)
T cd03233 53 LANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK------------------ 111 (202)
T ss_pred hcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc------------------
Confidence 999998 66 999999999876432 3467999999999999999999998753210
Q ss_pred cCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCC
Q 000787 273 AGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEIST 352 (1286)
Q Consensus 273 ~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEpts 352 (1286)
.+..+..||||||||++||++|+.+|++++|||||+
T Consensus 112 --------------------------------------------~~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~ 147 (202)
T cd03233 112 --------------------------------------------GNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTR 147 (202)
T ss_pred --------------------------------------------cccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCc
Confidence 112334699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEc
Q 000787 353 GLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1286)
Q Consensus 353 gLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1286)
|||+.++..+.+.|+++....+.++|+++||+.+++.+.+|++++|++|++++.|
T Consensus 148 ~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 148 GLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999998765335677777788888999999999999999998765
No 251
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=325.69 Aligned_cols=194 Identities=25% Similarity=0.340 Sum_probs=164.8
Q ss_pred cccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCCHHHHHHH
Q 000787 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYESLLF 964 (1286)
Q Consensus 886 ~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f 964 (1286)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 468999999987543 1234679999999998888999999987
Q ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000787 965 SAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1286)
Q Consensus 965 ~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~ 1044 (1286)
....+. .. .++.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1234556889999999988777653 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1045 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1045 ~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
.+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999999754 899999999986 47788999999985 7887654
No 252
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.2e-35 Score=331.77 Aligned_cols=204 Identities=25% Similarity=0.375 Sum_probs=170.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-----------cccceEEEecCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----------VPQRTAAYISQH 234 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 234 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 4999999999999999999999999999999999999987 99999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHHHhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 235 DNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
+.+++.+||+||+.++... .+. .. .+....++.+++.+||++..|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE--PK--------------------------------EEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC--CH--------------------------------HHHHHHHHHHHHHcCCcchhh
Confidence 8888899999999875421 110 00 001123566788999987665
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
+. ++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|
T Consensus 140 ~~-----~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SY-----PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CC-----hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcC
Confidence 54 456999999999999999999999999999999999999999999998754 3 4455667888889999999
Q ss_pred cEEEecCCeEEEEcChhHHH
Q 000787 394 DIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1286)
+|++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 253
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-36 Score=307.43 Aligned_cols=216 Identities=27% Similarity=0.387 Sum_probs=183.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
|+.+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|... +..|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 46688998873 4679999999999999999999999999999999999876 45799999999875
Q ss_pred h---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000787 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 1012 (1286)
. ....+.-+..+|+..+....||+|-+.++..-... .-...+..+.++++|+..++.+++... ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 4 34566778999999888888999999998532211 111224445678999999999888765 35799999
Q ss_pred HHHHHHHHHHhhC------CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1013 RKRLTIAVELVAN------PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1013 rqrl~ia~~L~~~------p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||.+||.|+.- +++||||||||.||...+..++++.|+++++|..|+|+-||.+. ...++|||++|++ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 9999999999863 35899999999999999999999999999999999999999986 6788999999985 89
Q ss_pred EEEeCCCC
Q 000787 1087 EIYVGPLG 1094 (1286)
Q Consensus 1087 ~~y~G~~~ 1094 (1286)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999874
No 254
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.8e-36 Score=342.81 Aligned_cols=256 Identities=27% Similarity=0.397 Sum_probs=204.2
Q ss_pred hhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcC
Q 000787 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIP 159 (1286)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~ 159 (1286)
.++.+-.|+-+.+.+.++ +.+++.+|.|+..+..|++++-- +
T Consensus 304 ~Ar~s~~Rl~~lL~~~p~--------~~~~m~LP~P~g~L~Ve~l~~~P-P----------------------------- 345 (580)
T COG4618 304 AARQSYKRLNELLAELPA--------AAERMPLPAPQGALSVERLTAAP-P----------------------------- 345 (580)
T ss_pred HHHHHHHHHHHHHHhCcc--------ccCCCCCCCCCceeeEeeeeecC-C-----------------------------
Confidence 455555666655555544 33467888899999999999821 1
Q ss_pred CccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcccc---ceEEEecCCCC
Q 000787 160 SKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDN 236 (1286)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~ 236 (1286)
..++++|+|+||.+.+|+-++|+||||||||||.++|.|..+|. +|.|.+||.+++++++. +.+||+||+-
T Consensus 346 --g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdV- 419 (580)
T COG4618 346 --GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDV- 419 (580)
T ss_pred --CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccc-
Confidence 13356999999999999999999999999999999999999998 99999999999988764 7899999954
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1286)
-++..||.|||. |+.. ....+.+.++++.... .++ ++.|++++||.|
T Consensus 420 eLF~GTIaeNIa---Rf~~-~~d~~kIieAA~lAgv---------------------------Hel--Il~lP~GYdT~i 466 (580)
T COG4618 420 ELFDGTIAENIA---RFGE-EADPEKVIEAARLAGV---------------------------HEL--ILRLPQGYDTRI 466 (580)
T ss_pred eecCCcHHHHHH---hccc-cCCHHHHHHHHHHcCh---------------------------HHH--HHhCcCCccCcc
Confidence 455579999995 2221 1222333344333211 111 578999999999
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 317 g~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
|+.+. +||||||||+++||||+++|.+++||||-|+||+.....+.+.|.+.. ..++|+|+. + |++.+...+|+|+
T Consensus 467 G~~G~-~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvvi-a-HRPs~L~~~Dkil 542 (580)
T COG4618 467 GEGGA-TLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVVI-A-HRPSALASVDKIL 542 (580)
T ss_pred CCCCC-CCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEEE-e-cCHHHHhhcceee
Confidence 98765 699999999999999999999999999999999999999999998864 345555554 3 3578999999999
Q ss_pred EecCCeEEEEcChhHHHHHH
Q 000787 397 LLSDGQIVYQGPRELVLEFF 416 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f 416 (1286)
+|++|++-.+|+.+|++...
T Consensus 543 vl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 543 VLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred eecCChHHhcCCHHHHHHHh
Confidence 99999999999999998754
No 255
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=349.11 Aligned_cols=206 Identities=24% Similarity=0.335 Sum_probs=175.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1286)
..+|+|+|++|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 45899999999999999999999999999999999999998 9999999998865432 2479999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++.+||+||+.|+.+..+... .+....++++++.+||++..+..+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999999765432110 001124567899999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|+..++..++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEE
Confidence 5699999999999999999999999999999999999999999999875433 44556678889999999999999
Q ss_pred ecCCeEEEEcChhHHH
Q 000787 398 LSDGQIVYQGPRELVL 413 (1286)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1286)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999998774
No 256
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=334.05 Aligned_cols=216 Identities=25% Similarity=0.348 Sum_probs=180.3
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++ ++.+|+|||+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56788887763 2469999999999999999999999999999999999865 46899999998653
Q ss_pred h---hcccceEEEeccCCCCCCCCCHHHHHHHHHhh--hcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
. ..+++.++|++|+..+++.+|+.|++.++... ..... ..+...+.++++++.+++.+..++. +..|||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 141 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGR-LSAEDNARVNQAMEQTRINHLADRR-----LTDLSG 141 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccC-CCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCH
Confidence 2 23455699999998888889999999875311 11111 1123345688999999998777765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (255)
T PRK11231 142 GQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQ 219 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEE
Confidence 9999999999999999999999999999999999999999999877999999999997 57889999999985 799999
Q ss_pred CCCC
Q 000787 1091 GPLG 1094 (1286)
Q Consensus 1091 G~~~ 1094 (1286)
|+.+
T Consensus 220 ~~~~ 223 (255)
T PRK11231 220 GTPE 223 (255)
T ss_pred cCHH
Confidence 8863
No 257
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.8e-35 Score=327.19 Aligned_cols=203 Identities=34% Similarity=0.544 Sum_probs=163.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1286)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 559999999999999999999999999999999999998 76 999999998875434457899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHH-HHHHcCCcccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLDVCADTMVGDEM 320 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~ 320 (1286)
||+||+.|+.......... ... .....+. .++.+++.+..++ .
T Consensus 97 tv~enl~~~~~~~~~~~~~---~~~----------------------------~~~~~~~~~l~~~~l~~~~~~-----~ 140 (226)
T cd03234 97 TVRETLTYTAILRLPRKSS---DAI----------------------------RKKRVEDVLLRDLALTRIGGN-----L 140 (226)
T ss_pred cHHHHHHHHHHhhcccccc---hHH----------------------------HHHHHHHHHHHhhcchhhhcc-----c
Confidence 9999999875432211000 000 0011233 6778888765554 4
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++..++.+.+|+|++|++
T Consensus 141 ~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~~ 219 (226)
T cd03234 141 VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLSS 219 (226)
T ss_pred ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEeC
Confidence 457999999999999999999999999999999999999999999998754 3556555444434689999999999999
Q ss_pred CeEEEEc
Q 000787 401 GQIVYQG 407 (1286)
Q Consensus 401 G~iv~~G 407 (1286)
|+++++|
T Consensus 220 G~i~~~g 226 (226)
T cd03234 220 GEIVYSG 226 (226)
T ss_pred CEEEecC
Confidence 9999876
No 258
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=337.99 Aligned_cols=215 Identities=26% Similarity=0.299 Sum_probs=181.8
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
-+.++|+++.++. ..+.+|+|+|++|++||++||+||||||||||+++|+|... +..|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3788999887731 12359999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ...++.+||++|++. .++..||+||+.+..... ..+.++..++++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 234567999999973 566789999998865432 1234455667899999999988877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|++.. + +.+|++++|++ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999876 8999999999863 4 46999999985 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 259
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=330.65 Aligned_cols=219 Identities=21% Similarity=0.284 Sum_probs=176.4
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCC---CCceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 931 (1286)
.++++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999962 2112479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 234567999999988776 6999999886543311 12233445688999999986432111111 146
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999997 47788999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999975
No 260
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=324.27 Aligned_cols=196 Identities=30% Similarity=0.452 Sum_probs=165.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--ccceEEEecCCCCCCCCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1286)
++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 4999999999999 99999999999999999999999998 999999998875432 24679999999988999999
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.+.....+... .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----GS 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----hh
Confidence 999988654321100 001123567888999987766655 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 5566678888889999999999999999
Q ss_pred EEEc
Q 000787 404 VYQG 407 (1286)
Q Consensus 404 v~~G 407 (1286)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 261
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=336.80 Aligned_cols=213 Identities=25% Similarity=0.372 Sum_probs=178.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++ ++.+|+|+|++|++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 56788887763 2358999999999999999999999999999999999876 46899999998753
Q ss_pred h-----hcccceEEEeccCCCC-CCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 Q-----ETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
. ...++.++|++|++.. ....|+.|++.+....+ ....++..+.++++++.+++.+..+.. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1345679999999753 34568999998864332 223344456688999999998877665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 47788999999985 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9875
No 262
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-36 Score=301.27 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=178.0
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCHHH
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYE 960 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 960 (1286)
..+|+|||+.|.+||.++++||||||||||||+++|..+ +..|.|.+||.++....-. -|.|+|++.++|++|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPgae--rgvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGAE--RGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCcc--ceeEeccCccchhhHHHH
Confidence 358999999999999999999999999999999999887 5689999999987654333 389999999999999999
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000787 961 SLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1040 (1286)
Q Consensus 961 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~ 1040 (1286)
|+.|+..++. +++.++.+.+.+.+..+||.+..+..+ -+||||||||+.|||||+.+|++|+||||++.||+
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999988874 678899999999999999999887763 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC-cEEEEeCCC
Q 000787 1041 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG-GQEIYVGPL 1093 (1286)
Q Consensus 1041 ~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~g-G~~~y~G~~ 1093 (1286)
-+++.++++|-++.+ +|+.++++||+... ..-+++++++|+.| |+++..=|+
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieE-AlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEE-ALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHhhhheeEEecCCCceeeEecCC
Confidence 999999999999864 59999999999874 44567999999864 688877665
No 263
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-36 Score=316.90 Aligned_cols=207 Identities=27% Similarity=0.376 Sum_probs=181.2
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----cccceEEEeccCCCCCC
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDIHSP 954 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 954 (1286)
+...+++|||+++++||++||+||||||||||+|+|+|..+ +..|+|.++|.++... ..+.-++--+|...+++
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 56789999999999999999999999999999999999887 5689999999986542 23456788899999999
Q ss_pred CCCHHHHHHHHHhhhc--------CCC-CCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhC
Q 000787 955 FVTIYESLLFSAWLRL--------SPE-VDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 1025 (1286)
Q Consensus 955 ~lTv~E~l~f~a~lr~--------~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~ 1025 (1286)
.|||.||+..++..+. +.. -..++..++..++|+.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998765331 111 1234556778999999999999999865 5999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1026 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1026 p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+.+. ++.+||||++|+. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999874 7999999999985 9999999999986 7999999973
No 264
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=336.23 Aligned_cols=206 Identities=26% Similarity=0.356 Sum_probs=170.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC--c---cccceEEEecCCCC-CCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1286)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 4999999999999999999999999999999999999998 9999999998741 1 12367999999863 345
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
..||+||+.++....+... .+....++++++.+||.+..++.
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~---- 138 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKP---- 138 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCC----
Confidence 6899999988653221100 00112457788999998766654
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.+++|+|++|+
T Consensus 139 -~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 139 -THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45699999999999999999999999999999999999999999999876533 4455557888889999999999999
Q ss_pred CCeEEEEcChhHHHH
Q 000787 400 DGQIVYQGPRELVLE 414 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1286)
+|++++.|+++++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988754
No 265
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=335.06 Aligned_cols=218 Identities=21% Similarity=0.274 Sum_probs=182.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++ ++.+|+|+|+++++|++++|+|||||||||||++|+|..+ +..|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 588899998874 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..+++.++|++|++.+++..|++|++.+....... .....+..+++++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 23345799999999888889999999875311100 0001123345688999999998776665 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999987 58899999999985 79999
Q ss_pred eCCCC
Q 000787 1090 VGPLG 1094 (1286)
Q Consensus 1090 ~G~~~ 1094 (1286)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 99863
No 266
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-35 Score=324.08 Aligned_cols=191 Identities=28% Similarity=0.380 Sum_probs=160.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCC-CCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDN-HIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV~ 244 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||+
T Consensus 14 ~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 14 EILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred ceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4999999999999999999999999999999999999998 9999999988754333467999999864 35578999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.++....+ . ....++++++.+||++..++.+ ..|
T Consensus 91 e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (205)
T cd03226 91 EELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHP-----LSL 127 (205)
T ss_pred HHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hhC
Confidence 99987542210 0 0123466788999987766554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.+++|+|++|++|+++
T Consensus 128 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 128 SGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999999999999999999998754 3 445555778888899999999999999975
No 267
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=334.61 Aligned_cols=217 Identities=27% Similarity=0.373 Sum_probs=180.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +..|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 588999987763 2469999999999999999999999999999999999865 4689999999765
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..+++.++|++|+..+++.+|+.|++.+....... ........+++++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456799999998888889999999875321100 00111233456889999999987766663 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999987 57789999999985 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 9875
No 268
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=331.08 Aligned_cols=220 Identities=23% Similarity=0.307 Sum_probs=177.6
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC---CceEEEEEEEc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITIS 930 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~---~~~~~G~i~i~ 930 (1286)
..+.++|+++.++ ++.+|+|+|++|++||+++|+|+|||||||||++|+|... ..+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 4588999998873 2359999999999999999999999999999999999742 11358999999
Q ss_pred CccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000787 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1286)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1286)
|.++.. ..+++.++|++|++.+++ .||+||+.+....+.. ...+..+++++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987532 234567999999988877 5999999987543311 12233456688899999985422111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 6799999999999999999999999999999999999999999999985 4799999999987 47788999999986 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 99998875
No 269
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=331.74 Aligned_cols=217 Identities=19% Similarity=0.247 Sum_probs=179.5
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.++++|+++.++ .+.+|+|+|++|++||++||+|||||||||||++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 377889988873 246999999999999999999999999999999999986532 2589999999
Q ss_pred ccCC-----hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.++. ...+++.++|++|++.+++.+||+||+.+....+. ....++.++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 8753 12345679999999988999999999988754331 1123444567889999999842 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 467999999999999999999999999999999999999999999999864 699999999986 4778999999997
Q ss_pred c-----CcEEEEeCCC
Q 000787 1083 R-----GGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~-----gG~~~y~G~~ 1093 (1286)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4899999875
No 270
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.8e-35 Score=333.35 Aligned_cols=223 Identities=23% Similarity=0.296 Sum_probs=179.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++...... ..+.+.+|+|+|++|++||++||+|+|||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67888888774210000 0013579999999999999999999999999999999999876 46899999998754
Q ss_pred hh------cccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000787 936 QE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1286)
.. ..++.++|++|++ .+.+.+||+|++.+..... .....+..+++++++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1356799999996 4667899999998754321 1123334456788999999996 555554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999987 47778999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999885
No 271
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=331.86 Aligned_cols=218 Identities=21% Similarity=0.263 Sum_probs=179.6
Q ss_pred CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEE
Q 000787 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIT 928 (1286)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~ 928 (1286)
....++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 445688999998873 2369999999999999999999999999999999999764 1 13589999
Q ss_pred EcCccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccc
Q 000787 929 ISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSL 999 (1286)
Q Consensus 929 i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~ 999 (1286)
++|.++.. ..+++.++|++|++.+++ .|++||+.+...... ..+.++.+++++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987531 234567999999988777 899999988653221 1233444567889999999843 23332
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEE
Q 000787 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF 1079 (1286)
Q Consensus 1000 ~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~ 1079 (1286)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEE
Confidence 45799999999999999999999999999999999999999999999996 4789999999986 4778899999
Q ss_pred EEecCcEEEEeCCC
Q 000787 1080 LMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1080 lL~~gG~~~y~G~~ 1093 (1286)
+|++ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 799999875
No 272
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=348.90 Aligned_cols=201 Identities=24% Similarity=0.300 Sum_probs=175.0
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh---c----ccceEEEeccCCCCC
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIHS 953 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~~~ 953 (1286)
..+|+|+||+|++||+++|+|||||||||||++|+|... +.+|+|.++|.++... . .++.+|||+|+..++
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~ 118 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCC
Confidence 468999999999999999999999999999999999876 4689999999876421 1 235799999999999
Q ss_pred CCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000787 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1286)
Q Consensus 954 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1286)
+.+||+||+.|....+. ...++..++++++++.++|.+..+..+ ..||||||||++|||||+.+|+||||||
T Consensus 119 ~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 119 PHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999998765432 234455667899999999988877763 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1034 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1034 PTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999875 4899999999987 57789999999985 799999875
No 273
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=335.16 Aligned_cols=214 Identities=28% Similarity=0.356 Sum_probs=179.6
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++ +++.+|+|||++|++||++||+||||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56788887763 12358999999999999999999999999999999999876 45899999998763
Q ss_pred h-----hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
. ...++.++|++|++. .+...||.|++.+..... ....++..+++.++++.++|.++.+..+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999963 334579999998764321 2334455567889999999988877763 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 47788999999986 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9985
No 274
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.4e-35 Score=345.16 Aligned_cols=208 Identities=25% Similarity=0.294 Sum_probs=175.6
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCc----cCCCccc-------cceEEEe
Q 000787 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH----DMDEFVP-------QRTAAYI 231 (1286)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 231 (1286)
....+|+|+||+|++||+++|+|||||||||||++|+|+++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3333211 2479999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000787 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1286)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1286)
+|++.+++.+||+||+.|+....+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865433211 0112345678999999877
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000787 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1286)
Q Consensus 312 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1286)
.|..+ ..|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.... +.+|+.++|+..++.++
T Consensus 158 ~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 76554 4699999999999999999999999999999999999999999999875433 45566688899999999
Q ss_pred cCcEEEecCCeEEEEcChhHHH
Q 000787 392 FDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 275
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=330.70 Aligned_cols=194 Identities=22% Similarity=0.322 Sum_probs=164.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1286)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 3999999999999999999999999999999999999998 9999999977543 2467999999988888899999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000787 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1286)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1286)
|+.++.. . . ....++.+++.+||.+..+.. +..||
T Consensus 101 nl~~~~~----~-~-----------------------------------~~~~~~~~l~~~gl~~~~~~~-----~~~LS 135 (257)
T PRK11247 101 NVGLGLK----G-Q-----------------------------------WRDAALQALAAVGLADRANEW-----PAALS 135 (257)
T ss_pred HHHhccc----c-h-----------------------------------HHHHHHHHHHHcCChhHhcCC-----hhhCC
Confidence 9987521 0 0 001245678889998766544 45699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEE
Q 000787 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1286)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1286)
|||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.... +.+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999875433 4455557888888999999999999999999
Q ss_pred EcChh
Q 000787 406 QGPRE 410 (1286)
Q Consensus 406 ~G~~~ 410 (1286)
.|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 276
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=333.41 Aligned_cols=220 Identities=26% Similarity=0.344 Sum_probs=181.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1286)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 477888887763 246999999999999999999999999999999999987532 236999999976
Q ss_pred CCh--------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-----CCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000787 934 KKQ--------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1286)
Q Consensus 934 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 1000 (1286)
... ...++.++|++|++.+++.+||+|++.+......+ .....++.+.+++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999888999999999875321000 01112334567899999999987777653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEE
Q 000787 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1079 (1286)
Q Consensus 1001 g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~ 1079 (1286)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999754 899999999986 4788899999
Q ss_pred EEecCcEEEEeCCCC
Q 000787 1080 LMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1080 lL~~gG~~~y~G~~~ 1094 (1286)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7899998863
No 277
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.2e-35 Score=332.74 Aligned_cols=216 Identities=28% Similarity=0.404 Sum_probs=178.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 46778877663 2469999999999999999999999999999999999875 45799999998753
Q ss_pred h---hcccceEEEeccCCCCCCCCCHHHHHHHHHhh-hcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWL-RLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~l-r~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
. ...++.++|++|++.+++.+||+||+.+.... +........+..++++++++.+++.+..+..+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 2 23345689999998777889999999875311 10000111233456889999999987777653 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||||++||++|+.+|++|+|||||+|||+.+...+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999997 57789999999985 7899998
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 75
No 278
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=329.39 Aligned_cols=200 Identities=26% Similarity=0.380 Sum_probs=166.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ...++|++|++.+++.+||+|
T Consensus 15 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 15 PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHH
Confidence 4999999999999999999999999999999999999998 99999999987542 345899999988889999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000787 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1286)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1286)
|+.++....+... .+....++++++.+||++..++.+ ..||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS 130 (255)
T PRK11248 90 NVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQLS 130 (255)
T ss_pred HHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhCC
Confidence 9988653221100 001123567889999987666543 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec--CCeE
Q 000787 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQI 403 (1286)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~i 403 (1286)
|||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|+..++..++|+|++|+ +|++
T Consensus 131 gGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 131 GGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcEE
Confidence 999999999999999999999999999999999999999999875433 4455667888899999999999998 5999
Q ss_pred EEEcChh
Q 000787 404 VYQGPRE 410 (1286)
Q Consensus 404 v~~G~~~ 410 (1286)
+..++.+
T Consensus 210 ~~~~~~~ 216 (255)
T PRK11248 210 VERLPLN 216 (255)
T ss_pred EEEecCC
Confidence 9988654
No 279
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=319.45 Aligned_cols=196 Identities=30% Similarity=0.581 Sum_probs=164.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1286)
.++|+|++|.++.+ .+++.+|+|+||+|++||++||+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 58899999999643 13457999999999999999999999999999999999986532 568999999987
Q ss_pred CCh--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
... ...++.++|++|++.+++.+||+|++.+.+... .+.. +..||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998753211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777766654467889999999986 788876
Q ss_pred C
Q 000787 1091 G 1091 (1286)
Q Consensus 1091 G 1091 (1286)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 280
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.3e-35 Score=324.78 Aligned_cols=213 Identities=25% Similarity=0.360 Sum_probs=176.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++... ....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 478899988774210 11359999999999999999999999999999999999875 4689999999875
Q ss_pred Chhc------c-cceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000787 935 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1286)
Q Consensus 935 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1286)
.... . ++.++|++|++.+++.+|++|++.+....+. ....+..++++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4211 1 2579999999988888999999988654321 233445567899999999987766653 57
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++. + +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQL-A-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999754 8999999999873 4 56999999985 67
Q ss_pred EEE
Q 000787 1087 EIY 1089 (1286)
Q Consensus 1087 ~~y 1089 (1286)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 754
No 281
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=336.28 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=177.5
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++... ...+.+|+|||++|++|++++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67888888774210 001359999999999999999999999999999999999876 46899999998753
Q ss_pred h-------hcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 000787 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1286)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 1005 (1286)
. ..+++.++|++|++ .+++ .||+||+.|..... ..+.++..+.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999996 3444 69999998864332 1234444566889999999963 44544 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 47788999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 99998875
No 282
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-35 Score=331.21 Aligned_cols=225 Identities=23% Similarity=0.261 Sum_probs=182.6
Q ss_pred cCCCCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEE
Q 000787 849 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITG 925 (1286)
Q Consensus 849 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G 925 (1286)
+|..+..+.++|+++.++ .+.+|+|||+++++||++||+|+|||||||||++|+|...+ .+.+|
T Consensus 14 ~~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G 80 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTG 80 (267)
T ss_pred cCCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcce
Confidence 344455789999998873 24699999999999999999999999999999999998642 14689
Q ss_pred EEEEcCccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000787 926 NITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1286)
Q Consensus 926 ~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 1000 (1286)
+|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....++.+++++++++.++|.+..+...
T Consensus 81 ~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 157 (267)
T PRK14237 81 QILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDL 157 (267)
T ss_pred EEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhh
Confidence 99999987632 134567999999988777 69999998864322 11233344567888999999864322222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEE
Q 000787 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1286)
Q Consensus 1001 g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~l 1080 (1286)
+. .+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|+++ ++.+.||++++
T Consensus 158 ~~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~ 234 (267)
T PRK14237 158 HK-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAF 234 (267)
T ss_pred cC-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEE
Confidence 22 246899999999999999999999999999999999999999999999985 4799999999997 57889999999
Q ss_pred EecCcEEEEeCCC
Q 000787 1081 MKRGGQEIYVGPL 1093 (1286)
Q Consensus 1081 L~~gG~~~y~G~~ 1093 (1286)
|++ |++++.|+.
T Consensus 235 l~~-G~i~~~g~~ 246 (267)
T PRK14237 235 FYL-GDLIEYDKT 246 (267)
T ss_pred EEC-CEEEEeCCH
Confidence 985 799999986
No 283
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.2e-35 Score=324.92 Aligned_cols=201 Identities=27% Similarity=0.346 Sum_probs=162.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCC--CC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--NH 237 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999998 999999999876543 235799999987 46
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1286)
++.+||+||+.+.....+.....+ ......+.+++.++|. ...+..
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKKE--------------------------------ARKEAVLLLLVGVGLPEEVLNRY- 142 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHHH--------------------------------HHHHHHHHHHHHCCCChhHhhCC-
Confidence 678999999988654321100000 0011124567888885 344443
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 317 g~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++....+ ++|+.++|+..++.+++|+|+
T Consensus 143 ----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 143 ----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEE
Confidence 456999999999999999999999999999999999999999999998764324 455557788888888999999
Q ss_pred EecCCeEEEEc
Q 000787 397 LLSDGQIVYQG 407 (1286)
Q Consensus 397 lL~~G~iv~~G 407 (1286)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 284
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-36 Score=322.98 Aligned_cols=222 Identities=26% Similarity=0.354 Sum_probs=192.1
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1286)
...-++|+|++++.||+..|||-||||||||+++|.++.+|+ +|+|+++|.++..... ++.+++|+|...
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 355789999999999999999999999999999999999998 9999999999866543 367999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1286)
++|+.||.||..|+.+.+|++.. +.+.++.+.|+..||+...+.+
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~y- 161 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKY- 161 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcC-
Confidence 99999999999999999886432 1223566789999999888755
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 317 g~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
+.+||||+||||.+||||+.+|+||+||||+|+|||--+.++.+.|.++-...++ +|+.++|+.+|++++.|||.
T Consensus 162 ----p~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~K-TIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 162 ----PNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKK-TIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred ----cccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCC-eEEEEecCHHHHHhccceEE
Confidence 5579999999999999999999999999999999999999999988877655544 55568999999999999999
Q ss_pred EecCCeEEEEcChhHHHHHHHhCCCCCCCCCChHHHHHhh
Q 000787 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v 436 (1286)
+|.+|+||..|+++|++. .|...-+++|...+
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 35555566666554
No 285
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=325.54 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=180.3
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
.++|+++.++ .+.+|+|+|++++||++++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5677877763 2469999999999999999999999999999999999876 457999999987643
Q ss_pred h-cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000787 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..+..+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 1 134679999999988888999999988654331 233344557889999999988777663 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999765 899999999986 47788999999986 799988864
No 286
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.3e-35 Score=326.19 Aligned_cols=201 Identities=26% Similarity=0.352 Sum_probs=165.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 14 HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754332 35699999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcC-Ccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDEM 320 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~~ 320 (1286)
||+||+.++....+.. . ....+.+++.++ +++..++ .
T Consensus 91 tv~~~l~~~~~~~~~~-~------------------------------------~~~~~~~l~~~~~l~~~~~~-----~ 128 (230)
T TIGR03410 91 TVEENLLTGLAALPRR-S------------------------------------RKIPDEIYELFPVLKEMLGR-----R 128 (230)
T ss_pred cHHHHHHHHHHhcCcc-h------------------------------------HHHHHHHHHHHHhHHHHhhC-----C
Confidence 9999998875332100 0 001234455554 4443443 3
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
++.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.+. .+++|+.++|+..++.+++|+|++|++
T Consensus 129 ~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 129 GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVMER 207 (230)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4569999999999999999999999999999999999999999999987542 345556677888899999999999999
Q ss_pred CeEEEEcChhHH
Q 000787 401 GQIVYQGPRELV 412 (1286)
Q Consensus 401 G~iv~~G~~~~~ 412 (1286)
|++++.|+.+++
T Consensus 208 g~i~~~~~~~~~ 219 (230)
T TIGR03410 208 GRVVASGAGDEL 219 (230)
T ss_pred CEEEEECCHHHc
Confidence 999999998876
No 287
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=339.69 Aligned_cols=214 Identities=21% Similarity=0.236 Sum_probs=173.0
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCccc-------cceEEEecCCC-
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD- 235 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1286)
..+|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 459999999999999999999999999999999999997421 128999999998765432 13699999987
Q ss_pred -CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 236 -NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
.+.|.+||.+++........... ..+....++++|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 47899999999876543210000 0111234677899999975221
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
+-++.+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++... .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 123456689999999999999999999999999999999999999999999998653 345666688999999999999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999988753
No 288
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-35 Score=327.06 Aligned_cols=211 Identities=26% Similarity=0.318 Sum_probs=174.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 35677877663 2469999999999999999999999999999999999876 46899999998754
Q ss_pred hh----cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCH
Q 000787 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..++.++|++|++.+++.+|++|++.+....+. .. ..+.++++++.++ +.+..+.. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCH
Confidence 21 124579999999998898999999988654321 11 1233567777776 45555554 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998864 899999999986 47778999999985 79999
Q ss_pred eCCCC
Q 000787 1090 VGPLG 1094 (1286)
Q Consensus 1090 ~G~~~ 1094 (1286)
.|+..
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 98863
No 289
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-35 Score=317.01 Aligned_cols=190 Identities=59% Similarity=0.947 Sum_probs=162.5
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++... .++.+|+|+|+++++|++++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 477899988874210 12469999999999999999999999999999999999743224689999999876
Q ss_pred ChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
. ..+++.++|++|++.+++.+|++|++.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 345567999999998889999999998753110 49999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999987799999999998744678899999998658999876
No 290
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=331.40 Aligned_cols=220 Identities=23% Similarity=0.257 Sum_probs=178.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1286)
.++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999998873 24699999999999999999999999999999999997642 13689999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.++.. ..+++.++|++|++.+++. ||+||+.|....+.. .....+..++++++++.+++.+........ .+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHE-PGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87632 2345679999999887774 999999987543311 112233456688999999996421111111 146
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999987 47788999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9999874
No 291
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=327.63 Aligned_cols=205 Identities=19% Similarity=0.340 Sum_probs=170.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 17 ~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T PRK10895 17 RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRL 93 (241)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccC
Confidence 4999999999999999999999999999999999999998 9999999998755332 35799999999889999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.+..+....... .+....++++++.+||++..+.. +
T Consensus 94 tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 135 (241)
T PRK10895 94 SVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSM-----G 135 (241)
T ss_pred cHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcc-----h
Confidence 999999876432110000 00122456788899997655544 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+ .+|+.++|+..++.+++|++++|++|
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiii~sH~~~~~~~~~d~v~~l~~G 213 (241)
T PRK10895 136 QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SG-LGVLITDHNVRETLAVCERAYIVSQG 213 (241)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEEcCHHHHHHhcCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999988653 34 45555778888999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+++++.
T Consensus 214 ~i~~~~~~~~~~ 225 (241)
T PRK10895 214 HLIAHGTPTEIL 225 (241)
T ss_pred eEEeeCCHHHHh
Confidence 999999988764
No 292
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.9e-35 Score=329.23 Aligned_cols=205 Identities=22% Similarity=0.322 Sum_probs=170.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc----------------ccceEE
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----------------PQRTAA 229 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~~ 229 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 4999999999999999999999999999999999999998 999999998875321 246799
Q ss_pred EecCCCCCCCCCCHHHHHHHHhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCC
Q 000787 230 YISQHDNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1286)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1286)
|++|++.+++.+||+||+.++... .+.. . .+....++++++.+||
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl 136 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMA-R---------------------------------AEAEKRAMELLDMVGL 136 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCC
Confidence 999999889999999999875321 1100 0 0011235667889999
Q ss_pred cccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 000787 309 DVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1286)
Q Consensus 309 ~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~ 388 (1286)
++..+.. +..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++... .+++|+.++|+..++
T Consensus 137 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~ 210 (252)
T TIGR03005 137 ADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFA 210 (252)
T ss_pred hhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHH
Confidence 8766544 4579999999999999999999999999999999999999999999987653 345566678888899
Q ss_pred HhhcCcEEEecCCeEEEEcChhHHH
Q 000787 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999988763
No 293
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.3e-35 Score=322.54 Aligned_cols=194 Identities=27% Similarity=0.402 Sum_probs=162.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 15 ~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 15 AALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 4999999999999999999999999999999999999998 999999999875432 2357999999998999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.+.....+.. . ++....++++++.+||++..++.+
T Consensus 92 ~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (214)
T cd03292 92 DRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALP--- 134 (214)
T ss_pred CCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCh---
Confidence 999999999875432210 0 001123567888999987666554
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+|++|+
T Consensus 135 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l~ 210 (214)
T cd03292 135 --AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIALE 210 (214)
T ss_pred --hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998754 3 4456667788889999999999999
Q ss_pred CCeE
Q 000787 400 DGQI 403 (1286)
Q Consensus 400 ~G~i 403 (1286)
+|++
T Consensus 211 ~G~~ 214 (214)
T cd03292 211 RGKL 214 (214)
T ss_pred CCcC
Confidence 9974
No 294
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-35 Score=337.96 Aligned_cols=208 Identities=20% Similarity=0.233 Sum_probs=174.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCC--C
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--N 236 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 236 (1286)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 46999999999999999999999999999999999999987 999999999876543 235799999987 5
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-ccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTM 315 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1286)
+.+.+||.+++.+..+......+ .+....+.++++.+||+. ..+.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLSA---------------------------------AERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCCH---------------------------------HHHHHHHHHHHHHCCCChHHhcC-
Confidence 88999999999876543210000 011234677899999963 4444
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
.+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++|+.++|+...+.+++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 45679999999999999999999999999999999999999999999987653 3556677899999999999999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000787 396 ILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1286)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 295
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2e-35 Score=327.42 Aligned_cols=198 Identities=23% Similarity=0.381 Sum_probs=167.8
Q ss_pred eecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCHHHHHH
Q 000787 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1286)
Q Consensus 884 L~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 963 (1286)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||+|++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 46899999998764321 12489999999989999999998
Q ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000787 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1286)
Q Consensus 964 f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~ 1043 (1286)
+...... .....++.++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 8632111 1233444556788999999998777665 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1044 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1044 ~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999987 47888999999986 799988764
No 296
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=338.38 Aligned_cols=225 Identities=24% Similarity=0.247 Sum_probs=184.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
-++.+|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478899988775321100 00123579999999999999999999999999999999999876 4589999999876
Q ss_pred Ch------hcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 000787 935 KQ------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1286)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 1005 (1286)
.. ..+++.++||+|++ .+.+.+|+.+++.+..... .....++.++++.++++.+||.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 13456799999997 5788899999987754332 12345566678999999999963 44554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
..||||||||++||+||+.+|+||++||||+|||..++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999999764 999999999986 46678999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 297
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.8e-34 Score=364.47 Aligned_cols=209 Identities=28% Similarity=0.368 Sum_probs=178.7
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+||+|+++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999876 468999999988
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+++ ..+++.+|||+|++.+++ -|++||+.++. + .+. +.++++++.+++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~~----e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LTL----DEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 467889999999998876 59999998752 1 222 3477888888887643 4556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999886 589999999985 4678999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 799999985
No 298
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.5e-35 Score=323.12 Aligned_cols=196 Identities=24% Similarity=0.355 Sum_probs=160.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1286)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 45999999999999999999999999999999999999998 9999999998765432 1569999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++.+||+||+.+......... .+....+.++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999988653221100 001123456888999987666544
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+..+. +|+.++|+..++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNT-SFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHh-hcCEEEE
Confidence 469999999999999999999999999999999999999999999987643344 4555677777764 5799999
Q ss_pred ecCCeEE
Q 000787 398 LSDGQIV 404 (1286)
Q Consensus 398 L~~G~iv 404 (1286)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 299
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-35 Score=322.39 Aligned_cols=215 Identities=26% Similarity=0.337 Sum_probs=180.3
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-C-CCCceeEEEEcCccCCCccc-------cceEEEecCC
Q 000787 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-P-TLKVSGTVTYNGHDMDEFVP-------QRTAAYISQH 234 (1286)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1286)
...+++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.|+|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4569999999999999999999999999999999999998 4 33567999999998755442 2579999999
Q ss_pred C--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000787 235 D--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1286)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1286)
+ .+.|.+||.+.+.-..+...... ..++...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 5 67899999988876554321000 0112234567789999998642
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000787 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1286)
Q Consensus 313 dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1286)
.+.+.++.+|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.+ ..++.++.|+|+..-+.++|
T Consensus 145 --~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 --RRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred --HHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 244677889999999999999999999999999999999999999999999999876 56788888999999999999
Q ss_pred CcEEEecCCeEEEEcChhHHH
Q 000787 393 DDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~ 413 (1286)
|+|+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 300
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=8.3e-35 Score=326.42 Aligned_cols=206 Identities=24% Similarity=0.390 Sum_probs=168.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ ...+|+|+++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 3899999999999999999999999999999999999863 22389999999987542 1246799999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----ccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1286)
+ +||+||+.+.....+.... .+....++.+++.+||. +..+.
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999986543211000 00112356678899997 44443
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+++|+
T Consensus 141 -----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 -----SALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3457999999999999999999999999999999999999999999998754 3 4556678888899999999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000787 395 IILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1286)
|++|++|++++.|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 301
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=326.61 Aligned_cols=202 Identities=25% Similarity=0.377 Sum_probs=165.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (237)
T PRK11614 19 QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRM 95 (237)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 35699999998889999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHc-CCcccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1286)
||+||+.++..... . + + ....++.+++.+ ++.+..++.
T Consensus 96 tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~----- 134 (237)
T PRK11614 96 TVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR----- 134 (237)
T ss_pred cHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc-----
Confidence 99999988642110 0 0 0 001123345555 355444433
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+. +|+.++|+..++.+.+|++++|++
T Consensus 135 ~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tiii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 135 AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGM-TIFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCC-EEEEEeCcHHHHHhhCCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998754 344 455577888899999999999999
Q ss_pred CeEEEEcChhHHH
Q 000787 401 GQIVYQGPRELVL 413 (1286)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1286)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (237)
T PRK11614 213 GHVVLEDTGDALL 225 (237)
T ss_pred CEEEeeCCHHHHh
Confidence 9999999998764
No 302
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=4.9e-35 Score=325.66 Aligned_cols=233 Identities=25% Similarity=0.320 Sum_probs=181.6
Q ss_pred EEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHH
Q 000787 119 VRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLAL 198 (1286)
Q Consensus 119 v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L 198 (1286)
|+.+|++.++.... .-+++.|.+.+.+ ..+...+++|+|+|+++++|++++|+|||||||||||++|
T Consensus 1 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i 67 (236)
T cd03267 1 IEVSNLSKSYRVYS---KEPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKIL 67 (236)
T ss_pred CceecchhhccCcC---CccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 35678888886632 2233334444332 1223446799999999999999999999999999999999
Q ss_pred hCCCCCCCCceeEEEEcCccCCCc--cccceEEEec-CCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCC
Q 000787 199 AGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYIS-QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1286)
Q Consensus 199 ~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1286)
+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++.+||+||+.+.....+...
T Consensus 68 ~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~----------------- 127 (236)
T cd03267 68 SGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP----------------- 127 (236)
T ss_pred hCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH-----------------
Confidence 9999998 99999999875332 1245799997 55667789999999988654322110
Q ss_pred CCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCC
Q 000787 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1286)
Q Consensus 276 ~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD 355 (1286)
++....++.+++.+||++..|+.++ .||||||||++||++|+.+|++++|||||+|||
T Consensus 128 -----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 128 -----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred -----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 0011234667888999988877654 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEc
Q 000787 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1286)
Q Consensus 356 ~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1286)
+.++..+.+.|+++.+.. +.+|+.++|+..++.+++|+|++|.+|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999876533 445555788888899999999999999998765
No 303
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=332.42 Aligned_cols=204 Identities=26% Similarity=0.377 Sum_probs=167.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCC-CCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 23 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (271)
T PRK13632 23 NALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGA 99 (271)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcc
Confidence 4899999999999999999999999999999999999998 999999999875432 2467999999863 67789
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.++....+... ++....++++++.+||++..++.+
T Consensus 100 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (271)
T PRK13632 100 TVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP----- 140 (271)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc-----
Confidence 99999988653211100 001124567889999987766554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.. .++++|+.++|+..++. .+|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~G 218 (271)
T PRK13632 141 QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSEG 218 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 33344444566666664 79999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (271)
T PRK13632 219 KLIAQGKPKEIL 230 (271)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 304
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=334.84 Aligned_cols=205 Identities=24% Similarity=0.356 Sum_probs=169.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------cccceEEEecCCCC-
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDN- 236 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1286)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 35999999999999999999999999999999999999998 99999999987532 11357999999862
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1286)
.+..+||+||+.|+....+.. . ++....++++++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS-E---------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999998865322110 0 01112456788999996 455544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 -----PFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998743 3 556666889999999999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000787 396 ILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1286)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 305
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=333.03 Aligned_cols=215 Identities=24% Similarity=0.309 Sum_probs=180.8
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++. +++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5789999887631 12468999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..+++.++|++|++. .++.+||+||+.+..... ..+.++.+..++++++.++|.+..++.+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 235667999999974 566789999998864322 1234445567899999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999766 5999999999974 4 57999999985 79999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 306
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.3e-35 Score=343.92 Aligned_cols=203 Identities=22% Similarity=0.316 Sum_probs=176.4
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc----cCC---hhc---c-cceEEEec
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY----PKK---QET---F-ARISGYCE 947 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~----~~~---~~~---~-~~~~gyv~ 947 (1286)
+...+|+|+||+|++||+++|||+||||||||+++|+|... +..|+|.++|. ++. ... + ++.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 44679999999999999999999999999999999999876 46899999995 221 111 2 24799999
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000787 948 QNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1286)
Q Consensus 948 Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~ 1027 (1286)
|++.+++.+||+||+.|+...+ ..+.++++++++++++.+||.+..+..+ ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999985443 2345566678899999999998887764 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1028 il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999765 999999999987 57899999999985 799999986
No 307
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=326.36 Aligned_cols=220 Identities=21% Similarity=0.278 Sum_probs=178.8
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1286)
.++++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478889988773 2469999999999999999999999999999999999864 21 2479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.++.. ..+++.++|++|+..+++.+|++||+.+...... .....+.+++++++++.+++.......... .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87532 2346679999999998898999999987643321 122333445688899999986421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999987 57789999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9999985
No 308
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-35 Score=342.97 Aligned_cols=212 Identities=27% Similarity=0.428 Sum_probs=179.1
Q ss_pred CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000787 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1286)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1286)
.+..++|+||.+++. +++.+|++|||+|++||.+||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 445699999999985 23459999999999999999999999999999999998764 479999999
Q ss_pred ccCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccC
Q 000787 932 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVG 1001 (1286)
Q Consensus 932 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g 1001 (1286)
++++. +.+|+.+||||||..++. -||.+|+.|+. .+.+.+ +|-++.+..++.+. .++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98653 568899999999988775 59999999963 334443 35566666666543 345577
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 000787 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1286)
Q Consensus 1002 ~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL 1081 (1286)
..| ..|||||||||+|||+++.+|+|+++|||||.||+++...+++.+++. ..|+|+|++.|+.+ ..+.||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCEEEEE
Confidence 765 569999999999999999999999999999999999999999999994 45899999999874 68899999999
Q ss_pred ecCcEEEEeCCC
Q 000787 1082 KRGGQEIYVGPL 1093 (1286)
Q Consensus 1082 ~~gG~~~y~G~~ 1093 (1286)
++ |++...|+-
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 788888875
No 309
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.9e-35 Score=321.20 Aligned_cols=193 Identities=29% Similarity=0.415 Sum_probs=161.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 16 ~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 16 AALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 4999999999999999999999999999999999999987 999999999876532 2357999999988888
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.++....+... ......++++++.+||++..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (214)
T TIGR02673 93 DRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP--- 135 (214)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754321100 001124567888999986655544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++|++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~ 211 (214)
T TIGR02673 136 --EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIILD 211 (214)
T ss_pred --hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEec
Confidence 46999999999999999999999999999999999999999999998753 34 456667788889999999999999
Q ss_pred CCe
Q 000787 400 DGQ 402 (1286)
Q Consensus 400 ~G~ 402 (1286)
+|+
T Consensus 212 ~G~ 214 (214)
T TIGR02673 212 DGR 214 (214)
T ss_pred CCC
Confidence 985
No 310
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-35 Score=328.55 Aligned_cols=205 Identities=33% Similarity=0.497 Sum_probs=170.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 16 TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 4999999999999999999999999999999999999988 9999999988754322 356999999988878899
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.++....+. .. ++....++.+++.+||++..++.+ .
T Consensus 93 v~e~l~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 133 (258)
T PRK13548 93 VEEVVAMGRAPHGL--SR--------------------------------AEDDALVAAALAQVDLAHLAGRDY-----P 133 (258)
T ss_pred HHHHHHhhhcccCC--Cc--------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----c
Confidence 99999886422110 00 001123566788999987666554 4
Q ss_pred CCChhHhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 323 GISGGQKKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~------~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
.|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+..+ .+|+.++|+..++.+++|+|+
T Consensus 134 ~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~ 212 (258)
T PRK13548 134 QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRIV 212 (258)
T ss_pred cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEEE
Confidence 69999999999999999 59999999999999999999999999998763334 456667888889999999999
Q ss_pred EecCCeEEEEcChhHHH
Q 000787 397 LLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1286)
+|++|++++.|+++++.
T Consensus 213 ~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 213 LLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999987764
No 311
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=331.87 Aligned_cols=219 Identities=26% Similarity=0.355 Sum_probs=178.1
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc------eEEEEEEE
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNITI 929 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~------~~~G~i~i 929 (1286)
++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56788877663 246999999999999999999999999999999999986531 12799999
Q ss_pred cCccCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000787 930 SGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1286)
Q Consensus 930 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1286)
+|.+... ..+++.++|++|++..++.+||+|++.+....... .....++..+.++++++.+++.+..+.. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987532 23455689999998766679999999875321110 0111123445688999999998776654 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhc
Q 000787 1006 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1075 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~---------~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~ 1075 (1286)
..||||||||++||++|+ .+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999999766 899999999987 477889
Q ss_pred CEEEEEecCcEEEEeCCCC
Q 000787 1076 DELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1076 D~~~lL~~gG~~~y~G~~~ 1094 (1286)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7999999863
No 312
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-35 Score=332.65 Aligned_cols=206 Identities=26% Similarity=0.366 Sum_probs=169.3
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc----ccceEEEecCCCC-CCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHDN-HIG 239 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1286)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999998 999999999875422 2467999999863 344
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
..||.||+.|+....+... .+....++++++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754322100 001224577899999987777655
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKY-GITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecChHHHhc-CCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876433 4445556777777765 99999999
Q ss_pred CCeEEEEcChhHHHH
Q 000787 400 DGQIVYQGPRELVLE 414 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1286)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 313
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-35 Score=331.51 Aligned_cols=216 Identities=24% Similarity=0.291 Sum_probs=181.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5889999887741 11358999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ...++.++|++|++. +++..|+.+++.|..... ....++..+.++++++.+++.+..+.. +..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 42 234567999999974 677789999998864322 223444456788999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++. +.. +|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~~-~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AME-ADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hhc-CCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 8999999999974 554 999999985 79999
Q ss_pred eCCCC
Q 000787 1090 VGPLG 1094 (1286)
Q Consensus 1090 ~G~~~ 1094 (1286)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 99863
No 314
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=327.15 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=176.5
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 934 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 934 (1286)
+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788887763 24699999999999999999999999999999999997532 24689999999876
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
.. ..+++.++|++|++.+++ .|++||+.+....+.... .....+++++++++.+++.+........ ....||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 43 234567999999988877 699999998654331100 1233445678899999995422111111 14679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 47788999999985 7999998
Q ss_pred CC
Q 000787 1092 PL 1093 (1286)
Q Consensus 1092 ~~ 1093 (1286)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 75
No 315
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-35 Score=336.80 Aligned_cols=220 Identities=18% Similarity=0.244 Sum_probs=180.4
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC-c-eEEEEEEEcCcc
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNITISGYP 933 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~-~-~~~G~i~i~g~~ 933 (1286)
++++|+++.++... +...+|+||||+|++||++||+|+||||||||+++|+|.... + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDES---------APFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCCC---------ccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 67889988774211 124699999999999999999999999999999999997642 2 368999999987
Q ss_pred CCh---hc----ccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc---cccccC
Q 000787 934 KKQ---ET----FARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL---RQSLVG 1001 (1286)
Q Consensus 934 ~~~---~~----~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~~g 1001 (1286)
+.. .. .++.++||+|++ .+.|.+|+.+++....... .....++.++++.++++.++|.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~--~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVH--QGGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 642 11 123699999998 4778899998887654322 123445566788999999999753 2333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEE
Q 000787 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFL 1080 (1286)
Q Consensus 1002 ~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~l 1080 (1286)
+.+|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|||++|||++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 467999999999999999999999999999999999999999999999976 4999999999987 46788999999
Q ss_pred EecCcEEEEeCCC
Q 000787 1081 MKRGGQEIYVGPL 1093 (1286)
Q Consensus 1081 L~~gG~~~y~G~~ 1093 (1286)
|.. |+++..|+.
T Consensus 227 m~~-G~ive~g~~ 238 (326)
T PRK11022 227 MYA-GQVVETGKA 238 (326)
T ss_pred EEC-CEEEEECCH
Confidence 985 899999985
No 316
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=362.61 Aligned_cols=221 Identities=21% Similarity=0.304 Sum_probs=185.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378899988773 2469999999999999999999999999999999999876433689999999876
Q ss_pred Chh----cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
... ..++.+|||+|++.+++.+||+|++.+....+.....+.++..++++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 421 124569999999988899999999988654321111223344567899999999987777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999987 47788999999985 799999
Q ss_pred CCCCc
Q 000787 1091 GPLGR 1095 (1286)
Q Consensus 1091 G~~~~ 1095 (1286)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98753
No 317
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-35 Score=327.35 Aligned_cols=206 Identities=21% Similarity=0.298 Sum_probs=164.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 38999999999999999999999999999999999998620 1289999999886421 1246799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----ccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1286)
+ +||+||+.|+....+.... ......++..++.+|+. +..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 9999999987533211000 00112345567777763 33344
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.++.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+++|+
T Consensus 147 -----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 -----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 23 4556678888899999999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000787 395 IILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1286)
|++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 318
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.7e-35 Score=324.91 Aligned_cols=212 Identities=26% Similarity=0.386 Sum_probs=180.1
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5677777663 2469999999999999999999999999999999999875 458999999987643
Q ss_pred h-cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000787 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
. ..++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..++.+ ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234679999999988888999999988654331 223334466789999999987777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998775 899999999986 47788999999985 799999885
No 319
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.4e-35 Score=321.19 Aligned_cols=198 Identities=23% Similarity=0.296 Sum_probs=167.8
Q ss_pred EeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCCHHHH
Q 000787 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYES 961 (1286)
Q Consensus 883 iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 961 (1286)
+++|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999876 458999999987542 2345679999999998888999999
Q ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000787 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1286)
Q Consensus 962 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~ 1041 (1286)
+.+...... .. ....+++++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KL-NAEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Cc-cHHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987542211 11 122345678899999998777765 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 000787 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1286)
Q Consensus 1042 ~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~ 1092 (1286)
++..+++.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 46788999999985 79988874
No 320
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=331.23 Aligned_cols=205 Identities=25% Similarity=0.361 Sum_probs=170.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCC-CCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 3999999999999999999999999999999999999998 9999999998754322 356899999863 34568
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.++....+... ++....++++++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987653321100 011224567889999987766654
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.+.+|+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999987653 2455666788888999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 321
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-35 Score=327.26 Aligned_cols=209 Identities=25% Similarity=0.344 Sum_probs=175.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++ ++.+|+|+|++|.+|++++|+||||||||||+++|+|... +..|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367888888763 2469999999999999999999999999999999999865 4689999999875
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 1010 (1286)
.. ...++.++|++|++.+++ .|++|++.+....+ . ....+++++++.+++. +..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988776 69999998753321 1 1134578899999996 455554 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 999999999987 47788999999985 78998
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 322
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=333.87 Aligned_cols=219 Identities=22% Similarity=0.295 Sum_probs=181.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
-+.++|+++.++.... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 3788999888742100 012469999999999999999999999999999999999876 4689999999876
Q ss_pred Ch----hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 935 KQ----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
.. ...++.+||++|++. .+...||.|++.|..... .....+.+++++++++.++|.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 234667999999974 233468999999875432 2334455667899999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. +. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 9999999999974 54 4999999986 7999
Q ss_pred EeCCC
Q 000787 1089 YVGPL 1093 (1286)
Q Consensus 1089 y~G~~ 1093 (1286)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99985
No 323
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=328.96 Aligned_cols=215 Identities=23% Similarity=0.324 Sum_probs=172.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCC-CCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999998 999999999875432 2457999999874 67888
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
|+++|+.|.....+... .+....++.+++.+||.+..++. +
T Consensus 100 ~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADYE-----P 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----c
Confidence 99999988754321100 00112356678899998766654 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++....+.| |+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-iiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNIT-IISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCchHHhc-CCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999875432444 5556677777765 9999999999
Q ss_pred eEEEEcChhHHHH---HHHhCCCCCC
Q 000787 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1286)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~~G~~cp 424 (1286)
++++.|+++++.+ .+...|+++|
T Consensus 219 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK13648 219 TVYKEGTPTEIFDHAEELTRIGLDLP 244 (269)
T ss_pred EEEEecCHHHHhcCHHHHHhcCCCCC
Confidence 9999999987643 2334444444
No 324
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=6.1e-35 Score=324.91 Aligned_cols=200 Identities=29% Similarity=0.403 Sum_probs=169.3
Q ss_pred ceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEec-cCCCCCCCC
Q 000787 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPFV 956 (1286)
Q Consensus 880 ~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~l 956 (1286)
.+.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 110 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDL 110 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCCC
Confidence 4579999999999999999999999999999999999876 468999999976422 23456799997 556677889
Q ss_pred CHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000787 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1286)
Q Consensus 957 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTs 1036 (1286)
|++|++.+...++. ...++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 111 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 182 (236)
T cd03267 111 PVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPTI 182 (236)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999988654331 233444556788999999988777663 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1037 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1037 gLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 183 ~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 183 GLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 99999999999999998764 899999999986 47788999999985 7888765
No 325
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-35 Score=330.44 Aligned_cols=215 Identities=22% Similarity=0.256 Sum_probs=176.4
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 930 (1286)
..+.++|+++.++ .+.+|+|+||+|++||+++|+|||||||||||++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999988873 24699999999999999999999999999999999997542 1368999999
Q ss_pred CccCC-----hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccC
Q 000787 931 GYPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVG 1001 (1286)
Q Consensus 931 g~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g 1001 (1286)
|.++. ....++.++|++|++.+++ .||+||+.+.+..+. .. ...++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98653 1234567999999998887 499999998764331 11 223455778888888742 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 000787 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1286)
Q Consensus 1002 ~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL 1081 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999987 588899999999
Q ss_pred ec----------CcEEEEeCCC
Q 000787 1082 KR----------GGQEIYVGPL 1093 (1286)
Q Consensus 1082 ~~----------gG~~~y~G~~ 1093 (1286)
++ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 3678999876
No 326
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1e-34 Score=324.77 Aligned_cols=211 Identities=23% Similarity=0.342 Sum_probs=171.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 16 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 16 KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988754432 24699999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.++..... ..+...... ...+....++++++.+|+++..++.+
T Consensus 93 tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (242)
T TIGR03411 93 TVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLA----- 141 (242)
T ss_pred CHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999988643110 000000000 00011234677889999987666554
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.++||+|++|++|
T Consensus 142 ~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 142 GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998743 3 45566788888999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
+++++|+.+++.
T Consensus 219 ~~~~~~~~~~~~ 230 (242)
T TIGR03411 219 SVLAEGSLDQVQ 230 (242)
T ss_pred eEEeeCCHHHHh
Confidence 999999987753
No 327
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=327.18 Aligned_cols=220 Identities=22% Similarity=0.295 Sum_probs=172.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1286)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.+
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (255)
T PRK11300 19 LAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREM 95 (255)
T ss_pred EEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765332 23589999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.++....... +...... .. +..+ ....+....++.+++.+||++..+..+
T Consensus 96 tv~enl~~~~~~~~~~---~~~~~~~------~~-~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 151 (255)
T PRK11300 96 TVIENLLVAQHQQLKT---GLFSGLL------KT-PAFR---------RAESEALDRAATWLERVGLLEHANRQA----- 151 (255)
T ss_pred cHHHHHHHhhhccccc---hhhhhhc------cc-cccc---------cchhHHHHHHHHHHHhCChhhhhhCCh-----
Confidence 9999999864311000 0000000 00 0000 000011234567888999986665544
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++||.++|+..++.+++|++++|++|
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 32455666788889999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+++++.
T Consensus 231 ~i~~~~~~~~~~ 242 (255)
T PRK11300 231 TPLANGTPEEIR 242 (255)
T ss_pred eEEecCCHHHHh
Confidence 999999988763
No 328
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1e-34 Score=337.00 Aligned_cols=224 Identities=19% Similarity=0.288 Sum_probs=182.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1286)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47899998777421 12356999999999999999999999999999999999987531 237999999987
Q ss_pred CCh---hc---cc-ceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000787 934 KKQ---ET---FA-RISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1286)
Q Consensus 934 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1286)
+.. .. ++ +.++||+|++ .+.|.+|+.+++.+...... ..+.++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 642 11 22 4799999998 67889999999887643322 234555567789999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1005 ~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
+.+||||||||++||+||+.+|++|++||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999765 999999999987 46678999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 799999985
No 329
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=330.17 Aligned_cols=204 Identities=23% Similarity=0.349 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc-------ccceEEEecCCCC-C
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN-H 237 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~-~ 237 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .
T Consensus 21 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 21 RALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 4999999999999999999999999999999999999998 999999999875421 2356999999862 3
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-cccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMV 316 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1286)
+...||+||+.|.....+... ++....++.+++.+||.. ..+..
T Consensus 98 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (280)
T PRK13649 98 LFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN- 142 (280)
T ss_pred hccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC-
Confidence 334799999988653221100 001123566788899963 34433
Q ss_pred cccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEE
Q 000787 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1286)
Q Consensus 317 g~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1286)
+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+++
T Consensus 143 ----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~ 216 (280)
T PRK13649 143 ----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVY 216 (280)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999998754 3 4455667788888999999999
Q ss_pred EecCCeEEEEcChhHHH
Q 000787 397 LLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1286)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 217 VLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988764
No 330
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=335.35 Aligned_cols=219 Identities=21% Similarity=0.303 Sum_probs=178.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++... .....+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 478999988874210 001359999999999999999999999999999999999876 4679999999765
Q ss_pred C--------hhcccceEEEeccCCCC-CCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCC
Q 000787 935 K--------QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPG 1004 (1286)
Q Consensus 935 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 1004 (1286)
. ...+++.++|++|++.. ....|++||+.|..... ....++..++++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22469999998864321 123344456688899999994 566654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1005 ~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999987 57889999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 799998875
No 331
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4.7e-35 Score=319.41 Aligned_cols=189 Identities=23% Similarity=0.370 Sum_probs=162.4
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC---h----hcccceEEEeccCCCCC
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFARISGYCEQNDIHS 953 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 953 (1286)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 46899999998742 1 12456799999999888
Q ss_pred CCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000787 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1286)
Q Consensus 954 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1286)
+.+|++||+.+....+ .....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8899999999865432 1233445567889999999987777653 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 000787 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1286)
Q Consensus 1034 PTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL 1081 (1286)
||+|||+.++..+.+.|+++.++|.|||+++|++. +.+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999877999999999986 34689999875
No 332
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-35 Score=330.94 Aligned_cols=203 Identities=27% Similarity=0.399 Sum_probs=168.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc----cceEEEecCCCC-CCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDN-HIGE 240 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 240 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 3999999999999999999999999999999999999998 9999999998764322 357999999864 4677
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000787 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1286)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1286)
+||+||+.|+....+... .+....++++++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLPP----------------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 899999988653321100 001124567788999987766554
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
..|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998753 3 45555577777777 56999999999
Q ss_pred CeEEEEcChhHHH
Q 000787 401 GQIVYQGPRELVL 413 (1286)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1286)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 333
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-35 Score=324.60 Aligned_cols=200 Identities=25% Similarity=0.398 Sum_probs=166.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 4899999999999999999999999999999999999998 999999998875432 2467999999887776 69
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccccccccc
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGDEMI 321 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1286)
|+||+.++....+ . ....++.+++.+||+ +..+. .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987532110 0 001245678889996 34443 34
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++....+ ++|+.++|+..++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999998754334 45566788888999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 334
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-35 Score=333.50 Aligned_cols=217 Identities=24% Similarity=0.283 Sum_probs=181.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCce-EEEEEEEcCcc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNITISGYP 933 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~-~~G~i~i~g~~ 933 (1286)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788999887631 12358999999999999999999999999999999999875321 13899999987
Q ss_pred CCh---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 934 KKQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
... ...++.+|||+|++. .++..||+|++.|....+ ..+.++.+++++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 566789999998864322 234555567789999999998877766 36799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 8999999999874 4 67999999985 7999
Q ss_pred EeCCC
Q 000787 1089 YVGPL 1093 (1286)
Q Consensus 1089 y~G~~ 1093 (1286)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99985
No 335
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=327.13 Aligned_cols=204 Identities=25% Similarity=0.350 Sum_probs=169.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc----------------cccceEE
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----------------VPQRTAA 229 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~~ 229 (1286)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (257)
T PRK10619 19 EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLT 95 (257)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceE
Confidence 4999999999999999999999999999999999999987 99999999876421 1135799
Q ss_pred EecCCCCCCCCCCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCC
Q 000787 230 YISQHDNHIGEMTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1286)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1286)
|++|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+||
T Consensus 96 ~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl 141 (257)
T PRK10619 96 MVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVGI 141 (257)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcCC
Confidence 99999988999999999987541 11100 00012235678889999
Q ss_pred cccc-cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 000787 309 DVCA-DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPE 387 (1286)
Q Consensus 309 ~~~~-dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~ 387 (1286)
.+.. + ..+..||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|+..+
T Consensus 142 ~~~~~~-----~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~~ 214 (257)
T PRK10619 142 DERAQG-----KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMGF 214 (257)
T ss_pred Chhhhh-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHH
Confidence 7643 3 33457999999999999999999999999999999999999999999998754 3 4555667888889
Q ss_pred HHhhcCcEEEecCCeEEEEcChhHHH
Q 000787 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 388 ~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
+..++|+|++|++|++++.|+++++.
T Consensus 215 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 215 ARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 99999999999999999999988764
No 336
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-34 Score=320.97 Aligned_cols=197 Identities=26% Similarity=0.332 Sum_probs=162.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+.+||+||+.+.....+... .+....++.+++.+||.+..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 99999999988653221100 001124567889999987666554
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++...+. +|+.++|+..++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGT-TLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEecCHHHH-HhCCEEEEE
Confidence 469999999999999999999999999999999999999999999987543344 455567777776 559999999
Q ss_pred cCCeEEEE
Q 000787 399 SDGQIVYQ 406 (1286)
Q Consensus 399 ~~G~iv~~ 406 (1286)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 337
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-35 Score=346.79 Aligned_cols=213 Identities=26% Similarity=0.423 Sum_probs=181.5
Q ss_pred CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000787 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1286)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1286)
.+..+..+|++|.++. .+++++|+|++++||+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 4556777799998852 2379999999999999999999999999999999999987 4689999999
Q ss_pred ccCC---hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccccc------ccCC
Q 000787 932 YPKK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS------LVGL 1002 (1286)
Q Consensus 932 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~------~~g~ 1002 (1286)
.+.. ...+++.++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..+|.+..+. .+|+
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 4568899999999998876 59999999852 2223 3447888888888776554 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+.++|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4578999999999999999999999999999999999999999999999986 599999999985 567789999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 799999975
No 338
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=326.06 Aligned_cols=209 Identities=20% Similarity=0.302 Sum_probs=165.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 48999999999999999999999999999999999987510 1289999999887432 1245799999988777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ +||+||+.|+.+..+... + +....++++++.+|+........ +
T Consensus 106 ~-~tv~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 149 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGANK--K--------------------------------DLDGVVENALRSAALWDETSDRL-K 149 (258)
T ss_pred c-ccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCCcchhhhh-c
Confidence 7 899999998754322100 0 01123556778888742111111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+++|+|++|
T Consensus 150 ~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~~-~tiiivsH~~~~~~~~~d~i~~l 226 (258)
T PRK14268 150 SPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--KD-YTIVIVTHNMQQAARISDYTGFF 226 (258)
T ss_pred CChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--hC-CEEEEEECCHHHHHHhCCEEEEE
Confidence 3345799999999999999999999999999999999999999999999874 23 55666788888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 227 ~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 227 LMGELIEFGQTRQIF 241 (258)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 339
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-34 Score=328.24 Aligned_cols=206 Identities=26% Similarity=0.342 Sum_probs=169.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc------cceEEEecCCC--C
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1286)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999998 9999999998764322 35699999986 4
Q ss_pred CCCCCCHHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccc
Q 000787 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1286)
+++.+||+||+.+..... ... .......++++++.+||+ ...+.
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTSLD----------------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 667899999998754211 000 000112456788899995 45554
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++... .+++|+.++|+...+.+++|+
T Consensus 147 ~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 L-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcE
Confidence 4 4569999999999999999999999999999999999999999999987643 245566678888899999999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000787 395 IILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1286)
+++|++|++++.|+++++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998764
No 340
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-35 Score=295.05 Aligned_cols=205 Identities=27% Similarity=0.405 Sum_probs=176.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHH
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
..+|+|||+.|.+|+.++++||||||||||||+++|+.+|. .|+|.+||.++.. |...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 45999999999999999999999999999999999999998 9999999998764 234568999999999999999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
+|++|+.++.|.+.. .| ..++.+.+...||++..+.. +-+|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~-----i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKY-----IWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccc-----eEee
Confidence 999999999886432 11 23456778899998776544 4579
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec--CCe
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~ 402 (1286)
||||||||.|||||+.+|+.|+||||+.+||.-|+.++.+.|-++.+..++ -++.++|+.+|+.-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk-~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGK-QVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCC-eEEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999999888775544 45558899999999999999998 479
Q ss_pred EEEEcChhHHHH
Q 000787 403 IVYQGPRELVLE 414 (1286)
Q Consensus 403 iv~~G~~~~~~~ 414 (1286)
|+..=+++-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998776664433
No 341
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.7e-35 Score=364.76 Aligned_cols=256 Identities=23% Similarity=0.333 Sum_probs=195.0
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.....+|+.+.++.+++. . +....+.+...++++|+++.++.
T Consensus 284 ~~~~~~~~~ri~~~l~~~~~~-----~---~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 328 (544)
T TIGR01842 284 FSGARQAYKRLNELLANYPSR-----D---PAMPLPEPEGHLSVENVTIVPPG--------------------------- 328 (544)
T ss_pred HHHHHHHHHHHHHHHhCCccc-----c---CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 478888999998888765541 0 01112223457999999998742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
...++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|+
T Consensus 329 -----~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~ 400 (544)
T TIGR01842 329 -----GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQD 400 (544)
T ss_pred -----CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCC
Confidence 1134899999999999999999999999999999999999998 9999999999876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+++ .|++||+.+... ....+.+.++++.. ..++.++ .|++..||
T Consensus 401 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~~---------------------------~~~~~i~--~l~~gl~t 446 (544)
T TIGR01842 401 VELFP-GTVAENIARFGE----NADPEKIIEAAKLA---------------------------GVHELIL--RLPDGYDT 446 (544)
T ss_pred ccccc-ccHHHHHhccCC----CCCHHHHHHHHHHh---------------------------ChHHHHH--hCcccccc
Confidence 87775 599999985421 11112222211110 1123333 35667789
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+ ..||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+|+ ++|..+ ..+.+|+
T Consensus 447 ~~~~~g-~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~-ith~~~-~~~~~d~ 522 (544)
T TIGR01842 447 VIGPGG-ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVV-ITHRPS-LLGCVDK 522 (544)
T ss_pred ccCCCc-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEE-EeCCHH-HHHhCCE
Confidence 998764 46999999999999999999999999999999999999999999987642 3456555 455444 5678999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|++++.|+++++.+
T Consensus 523 i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 523 ILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EEEEECCEEEeeCCHHHHhh
Confidence 99999999999999988753
No 342
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.2e-34 Score=319.90 Aligned_cols=195 Identities=24% Similarity=0.334 Sum_probs=163.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc------ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 16 QALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 4999999999999999999999999999999999999988 999999999875432 2357999999988889
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.+.....+... ++....++.+++.+||.+..++.
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 134 (222)
T PRK10908 93 DRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNF---- 134 (222)
T ss_pred cccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC----
Confidence 9999999988654322100 00112345678889998765544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
+..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++...+|+|++|+
T Consensus 135 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (222)
T PRK10908 135 -PIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLS 211 (222)
T ss_pred -chhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 456999999999999999999999999999999999999999999998754 3 4556668888899999999999999
Q ss_pred CCeEE
Q 000787 400 DGQIV 404 (1286)
Q Consensus 400 ~G~iv 404 (1286)
+|+++
T Consensus 212 ~G~i~ 216 (222)
T PRK10908 212 DGHLH 216 (222)
T ss_pred CCEEc
Confidence 99985
No 343
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=328.19 Aligned_cols=204 Identities=28% Similarity=0.383 Sum_probs=167.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC--c---cccceEEEecCCCC-CCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++||+|++. .++
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 3899999999999999999999999999999999999998 9999999998742 1 11357999999864 345
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
..|+.||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI--- 134 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc---
Confidence 6789999988643221100 001123566788899987666544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++++|+
T Consensus 135 --~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 135 --QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4456667888889999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+++++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 344
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=325.82 Aligned_cols=215 Identities=26% Similarity=0.300 Sum_probs=175.6
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+|+|++|++||++||+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478899988773 2469999999999999999999999999999999999632 2 12479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87531 234567999999988777 899999988653321 1122334556788999998753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 699999999986 5788899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 345
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=325.57 Aligned_cols=207 Identities=22% Similarity=0.315 Sum_probs=164.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCc-----cccceEEEecCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 49999999999999999999999999999999999864 34 89999999887532 1245799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
.+++ .||+||+.|+....+.... + .....++.+++.+||.+...+.
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK-A--------------------------------YLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987543221100 0 0112345567778875422222
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
. ++.++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v 218 (253)
T PRK14242 143 L-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVT 218 (253)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEE
Confidence 2 23456799999999999999999999999999999999999999999999873 24 45566788888999999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000787 396 ILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1286)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 219 AFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 346
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=328.09 Aligned_cols=204 Identities=28% Similarity=0.397 Sum_probs=168.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-----cccceEEEecCCCC-CCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDN-HIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~~ 239 (1286)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 4999999999999999999999999999999999999998 99999999987421 12367999999853 345
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+||+||+.|+....+.. + .+....+.++++.+||.+..++.+
T Consensus 93 ~~tv~e~i~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~--- 135 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS-K---------------------------------EEVEKRVKEALKAVGMEGFENKPP--- 135 (275)
T ss_pred cccHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCchhhcCCh---
Confidence 679999998764221110 0 001123567889999987777654
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+|++|+
T Consensus 136 --~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 136 --HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4556667888889999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998875
No 347
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=336.81 Aligned_cols=222 Identities=16% Similarity=0.206 Sum_probs=178.8
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--ceEEEEEEEcCcc
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGYP 933 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~ 933 (1286)
+.++|++..++.. .+...+|+||||+|++||++||+|+||||||||+++|+|.... .+..|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788998877432 1235699999999999999999999999999999999998642 2467999999987
Q ss_pred CCh---hc----ccceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCC---CCHHHHHHHHHHHHHHcCCCcc---ccc
Q 000787 934 KKQ---ET----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPE---VDSETRKMFIDEVMELVELNPL---RQS 998 (1286)
Q Consensus 934 ~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~---~~~ 998 (1286)
+.. .. .++.++||+|++. +.+.+||.+++.+......... ....+.++++.++++.++|.+. .+.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 11 1346999999975 5688999999976422111000 1123445678899999999753 233
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCE
Q 000787 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1077 (1286)
Q Consensus 999 ~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~ 1077 (1286)
. +..|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 4679999999999999999999999999999999999999999999999874 999999999986 47788999
Q ss_pred EEEEecCcEEEEeCCC
Q 000787 1078 LFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1078 ~~lL~~gG~~~y~G~~ 1093 (1286)
+++|.+ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999985 799999985
No 348
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=324.36 Aligned_cols=203 Identities=27% Similarity=0.351 Sum_probs=167.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC------c---cccceEEEecCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE------F---VPQRTAAYISQHDN 236 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 4999999999999999999999999999999999999988 9999999987631 1 11357999999998
Q ss_pred CCCCCCHHHHHHHH-hHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 237 HIGEMTVRETLAFS-ARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
+++.+||+||+.+. ....+... .+....++.+++.+||++..+..
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 99999999999753 22111100 00112356778899998766654
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
+ +.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. . +++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 4 56999999999999999999999999999999999999999999998753 3 455666788888999999999
Q ss_pred EEecCCeEEEEcChhHH
Q 000787 396 ILLSDGQIVYQGPRELV 412 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1286)
++|.+|++++.|+++++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999988764
No 349
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=320.34 Aligned_cols=205 Identities=27% Similarity=0.339 Sum_probs=171.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc-ccceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.... .++.++|++|++..++.+||+
T Consensus 14 ~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 14 VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 4999999999999999999999999999999999999998 999999999876533 246799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.+.....+... ......++.+++.+||++..++.+ ..|
T Consensus 91 ~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (232)
T cd03300 91 ENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQL 131 (232)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hhC
Confidence 99988654322100 001123567888999987766554 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....+. +|+.++|+..++.+.+|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~-tiii~sh~~~~~~~~~d~i~~l~~G~~~ 210 (232)
T cd03300 132 SGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGI-TFVFVTHDQEEALTMSDRIAVMNKGKIQ 210 (232)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987643344 4555677788899999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (232)
T cd03300 211 QIGTPEEIY 219 (232)
T ss_pred ecCCHHHHH
Confidence 999887663
No 350
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-35 Score=323.89 Aligned_cols=211 Identities=21% Similarity=0.289 Sum_probs=176.5
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++. + ..|||+++++|+++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 567888887741 1 238999999999999999999999999999999876 46799999998754
Q ss_pred hh-cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..+++++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 31 12457999999999888899999998753211 111 2234566899999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999987 47788999999985 799999875
No 351
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=335.09 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=168.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++.++
T Consensus 96 ~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~ 175 (329)
T PRK14257 96 HVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF 175 (329)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998631 01289999999998532 2356799999987766
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
..||+|||.|+....+... .+ .....++..++..+|.+..++.++.
T Consensus 176 -~~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~~ 221 (329)
T PRK14257 176 -EMSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLDK 221 (329)
T ss_pred -CCcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhhC
Confidence 5899999998753321100 00 0111234566777776555566654
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
....|||||||||+||||++.+|+||+|||||+|||+.+...+.++|+++.+ + .+|++++|....+.+.+|+|++|
T Consensus 222 -~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driivl 297 (329)
T PRK14257 222 -AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVFF 297 (329)
T ss_pred -CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999998643 3 45666788888899999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 298 ~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 298 YQGWIEEAGETKTIF 312 (329)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999874
No 352
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=325.38 Aligned_cols=215 Identities=21% Similarity=0.236 Sum_probs=177.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888887763 246999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.++.. ...++.++|++|++.+++ .|++||+.|...... ....++.+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 134567999999998887 899999998654321 1123344566788999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 467999999999999999999999999999999999999999999999876 699999999986 5788899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 799999885
No 353
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=322.50 Aligned_cols=199 Identities=27% Similarity=0.391 Sum_probs=171.9
Q ss_pred EeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-cccceEEEeccCCCCCCCCCHHHH
Q 000787 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYES 961 (1286)
Q Consensus 883 iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~ 961 (1286)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +..|+|.++|.+.... ..++.++|++|++.+++.+|+.|+
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 4689999999876431 234579999999988889999999
Q ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000787 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1286)
Q Consensus 962 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~ 1041 (1286)
+.+..... .....+..+.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1233444556788999999988777663 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1042 ~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 999999999986 47788999999985 799999875
No 354
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=326.64 Aligned_cols=219 Identities=19% Similarity=0.247 Sum_probs=176.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1286)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999988763 24699999999999999999999999999999999997642 1 1479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.+... ...++.+||++|++.+++. ||+||+.|....+. ....++..++++++++.+++.+........ .+.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHT-QAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87531 2345679999999888775 99999988643321 112334455678899999985421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999987 57789999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9999875
No 355
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-33 Score=361.80 Aligned_cols=211 Identities=25% Similarity=0.368 Sum_probs=177.8
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++++|++|.++. ++.+|+|+|++|+||+.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 46999999999851 2358999999999999999999999999999999999876 468999999987
Q ss_pred CC---hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 000787 934 KK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1286)
Q Consensus 934 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 1003 (1286)
+. ...+++.+|||+|++.+++ -|++||+.++.. ++.+. +.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 64 3467788999999998876 499999987521 12332 346777777777543 25566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999985 4899999999986 4688999999986
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 799999984
No 356
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=329.88 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=168.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCC-CCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1286)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++||+|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 4999999999999999999999999999999999999987112399999999876432 2357999999864 67789
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||+||+.|..+..+.. .++....++.+++.+||++..++. +
T Consensus 101 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~-----~ 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSE-----P 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCC-----c
Confidence 9999998864322110 001123456788999998766544 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+..++ ..+|++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNN-LTVISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEEECC
Confidence 57999999999999999999999999999999999999999999998764334 4455566777777 579999999999
Q ss_pred eEEEEcChhHHHH
Q 000787 402 QIVYQGPRELVLE 414 (1286)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1286)
++++.|+++++.+
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988753
No 357
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=324.78 Aligned_cols=215 Identities=21% Similarity=0.290 Sum_probs=176.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.++++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367889988763 235999999999999999999999999999999999965321 2579999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...++.++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 234567999999988777 8999999987543211 123344566888899988753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999985 4899999999986 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 799998874
No 358
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.2e-34 Score=312.66 Aligned_cols=190 Identities=49% Similarity=0.849 Sum_probs=162.8
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCC--CCceEEEEEEEcCc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNITISGY 932 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~--~~~~~~G~i~i~g~ 932 (1286)
.++++|+++.++.... ...+.+|+|+|+++++|++++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4788999888742100 01246999999999999999999999999999999999987 5 56899999998
Q ss_pred cCChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 000787 933 PKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1286)
Q Consensus 933 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 1012 (1286)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445678999999998888899999998643110 499999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1013 rqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999997567788999999986 7888764
No 359
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=323.88 Aligned_cols=212 Identities=24% Similarity=0.288 Sum_probs=168.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcc---ccceEEEecCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGE 240 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 240 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 4899999999999999999999999999999999998741 013899999999875432 23679999999888899
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000787 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1286)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1286)
+||+||+.++.+..+..... .+....++++++.+||.+..+.. -+..
T Consensus 97 ~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKSK--------------------------------KELQERVRWALEKAQLWDEVKDR-LDAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCCH--------------------------------HHHHHHHHHHHHHcCCCcchhhh-hcCC
Confidence 99999999875432110000 00112356678888986421111 1234
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+|++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 56799999999999999999999999999999999999999999999864 23 5566678888889999999999999
Q ss_pred CeEEEEcChhHHH
Q 000787 401 GQIVYQGPRELVL 413 (1286)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1286)
|++++.|+++++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999988764
No 360
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=8.8e-35 Score=341.58 Aligned_cols=194 Identities=23% Similarity=0.376 Sum_probs=169.5
Q ss_pred cccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hcccceEEEeccCCCCCCCCCH
Q 000787 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1286)
Q Consensus 886 ~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1286)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999876 468999999987532 1245679999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000787 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1286)
Q Consensus 959 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1286)
+||+.|+.... ...+.+++++++++.++|.+..+..+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 12334556899999999988877763 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1039 D~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|++ |++++.|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999865 899999999987 57788999999986 799999875
No 361
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=325.35 Aligned_cols=219 Identities=18% Similarity=0.240 Sum_probs=174.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcCc
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISGY 932 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~ 932 (1286)
-+++|+++.++ .+.+|+|+||+|.+||+++|+|+||||||||+++|+|.... . +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35677777663 24699999999999999999999999999999999997541 1 35899999998
Q ss_pred cCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000787 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1286)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1286)
++.. ..+++.++|++|++.+++. |++||+.+....+.. ....+..++.++++++.+++.+........ .+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 6532 1345679999999887775 999999886433211 112233445688899999986522111111 1467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999987 57788999999986 799
Q ss_pred EEeCCC
Q 000787 1088 IYVGPL 1093 (1286)
Q Consensus 1088 ~y~G~~ 1093 (1286)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 998875
No 362
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.2e-35 Score=329.42 Aligned_cols=223 Identities=21% Similarity=0.262 Sum_probs=180.0
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.+..+... ...+.+.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~~----~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTGW----FRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCCc----ccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 7889999887421100 00012469999999999999999999999999999999999876 46899999998764
Q ss_pred h---hcccceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCC
Q 000787 936 Q---ETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lS 1009 (1286)
. ...++.++|++|++. +.+.+|+.|++.++...+. .....+..+.++++++.++|. ...+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 2 123356999999975 5677899999988654331 223344456788999999994 555544 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999987 57778999999985 7999
Q ss_pred EeCCC
Q 000787 1089 YVGPL 1093 (1286)
Q Consensus 1089 y~G~~ 1093 (1286)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88874
No 363
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=324.50 Aligned_cols=218 Identities=23% Similarity=0.319 Sum_probs=176.4
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1286)
++++|+++.++ ++.+|+|+||++++||+++|+|+|||||||||++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887763 246899999999999999999999999999999999975421 25899999998
Q ss_pred cCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000787 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1286)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1286)
++.. ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+.... ..+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhh
Confidence 7532 234567999999988877 899999988653321 11223345567889999998642111111 12467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999987 47788999999986 799
Q ss_pred EEeCCC
Q 000787 1088 IYVGPL 1093 (1286)
Q Consensus 1088 ~y~G~~ 1093 (1286)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 998875
No 364
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.8e-34 Score=323.13 Aligned_cols=212 Identities=26% Similarity=0.331 Sum_probs=168.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEEcCccCCCccc----cceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++.+++
T Consensus 14 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 14 EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 4999999999999999999999999999999999995 566 9999999998755432 234899999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-cccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMVGD 318 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg~ 318 (1286)
.+|++|++.+.......... .... ...+....++.+++.+||+. ..+..++
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~- 142 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN- 142 (243)
T ss_pred CcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchhhcccccc-
Confidence 99999999886432110000 0000 00011234677899999973 4554432
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh-cCcEEE
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL-FDDIIL 397 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~-~D~iil 397 (1286)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++... +|+|++
T Consensus 143 ---~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~vsH~~~~~~~~~~d~i~~ 217 (243)
T TIGR01978 143 ---EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-P-DRSFLIITHYQRLLNYIKPDYVHV 217 (243)
T ss_pred ---cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CcEEEEEEecHHHHHhhcCCeEEE
Confidence 14999999999999999999999999999999999999999999998753 3 44555577888888888 899999
Q ss_pred ecCCeEEEEcChhHHH
Q 000787 398 LSDGQIVYQGPRELVL 413 (1286)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1286)
|++|++++.|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 218 LLDGRIVKSGDVELAK 233 (243)
T ss_pred EeCCEEEEecCHHHhc
Confidence 9999999999988654
No 365
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-35 Score=340.65 Aligned_cols=190 Identities=23% Similarity=0.379 Sum_probs=167.6
Q ss_pred cccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hcccceEEEeccCCCCCCCCCH
Q 000787 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1286)
Q Consensus 886 ~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1286)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++||+|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 468999999976532 1245679999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000787 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1286)
Q Consensus 959 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1286)
+||+.|+.. ...+++++++++.++|.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988631 122356889999999988877763 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1039 D~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999765 899999999986 58889999999985 799999986
No 366
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-35 Score=291.16 Aligned_cols=197 Identities=26% Similarity=0.380 Sum_probs=170.6
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh------c-ccceEEEeccCCC
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------T-FARISGYCEQNDI 951 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~ 951 (1286)
....||++|++.|++||.+||+|||||||||||-+|+|... +.+|+|.+.|++.... . ..+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 45689999999999999999999999999999999999876 4689999999986431 1 3467999999999
Q ss_pred CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000787 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1286)
Q Consensus 952 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~L 1031 (1286)
+.|++|..||+.....++.... .+......+.++.+||.+-.+.+ +.+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999999988876322 22334567889999998766655 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 000787 1032 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1286)
Q Consensus 1032 DEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~ 1088 (1286)
||||-+||..+...|.++|-.+.+ .|.|.|++||||. +...|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 999999999999999999998864 4999999999995 6788999999986 6765
No 367
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=318.08 Aligned_cols=191 Identities=25% Similarity=0.385 Sum_probs=163.5
Q ss_pred cccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hcccceEEEeccCCCCCCCCCH
Q 000787 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1286)
Q Consensus 886 ~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1286)
|||+++++ |+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999876 468999999976531 1235679999999988888999
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000787 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1286)
Q Consensus 959 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1286)
+|++.+..... .....+++++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 2233445688999999998766655 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1039 D~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 47788999999985 7887765
No 368
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.8e-34 Score=318.67 Aligned_cols=196 Identities=25% Similarity=0.344 Sum_probs=166.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+|
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 14 TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 4999999999999999999999999999999999999998 999999998765322 357999999988899999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000787 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1286)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1286)
|+.+.....+.. ...+..+++.+||++..|..+ ..||
T Consensus 90 ~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~LS 126 (223)
T TIGR03740 90 NLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQFS 126 (223)
T ss_pred HHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhCC
Confidence 998765332100 012456788899987666544 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEE
Q 000787 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1286)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1286)
||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+ .+|+.++|+..++.+.+|+|++|++|++++
T Consensus 127 ~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~ 204 (223)
T TIGR03740 127 LGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QG-ITVILSSHILSEVQQLADHIGIISEGVLGY 204 (223)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999999998753 34 445557778888999999999999999999
Q ss_pred EcChh
Q 000787 406 QGPRE 410 (1286)
Q Consensus 406 ~G~~~ 410 (1286)
.|++.
T Consensus 205 ~~~~~ 209 (223)
T TIGR03740 205 QGKIN 209 (223)
T ss_pred ecChh
Confidence 99865
No 369
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=335.35 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=171.3
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCccc-------cceEEEecCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1286)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 459999999999999999999999999999999999987411 128999999998765432 246999999875
Q ss_pred --CCCCCCHHHHHHHHhHhcCC-CchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 237 --HIGEMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
+.+.+||.+++.+....... +... . + ..+....+.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~--~-----------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------Q--R-----------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------c--c-----------HHHHHHHHHHHHHHCCCCChHH
Confidence 67889999999764321000 0000 0 0 0011234677899999975321
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
+-++.+..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+++|+.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCC
Confidence 12345568999999999999999999999999999999999999999999999764 335567778999999999999
Q ss_pred cEEEecCCeEEEEcChhHHH
Q 000787 394 DIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1286)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998774
No 370
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=323.89 Aligned_cols=219 Identities=22% Similarity=0.245 Sum_probs=176.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999976521 3579999999
Q ss_pred ccCC----hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000787 932 YPKK----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1286)
Q Consensus 932 ~~~~----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1286)
.++. ....++.++|++|++.+++ .||.||+.+...... ....+...+++.++++.+++.+........ .+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 7653 1234567999999988887 899999988643221 112233445678888888875321111111 1457
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999975 699999999987 57888999999986 799
Q ss_pred EEeCCC
Q 000787 1088 IYVGPL 1093 (1286)
Q Consensus 1088 ~y~G~~ 1093 (1286)
++.|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 999875
No 371
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=316.95 Aligned_cols=195 Identities=24% Similarity=0.366 Sum_probs=162.8
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHHHHHH
Q 000787 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1286)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1286)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999998 9999999998755432 367999999998899999999998
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000787 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1286)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1286)
++..... ... .+....++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KLT---------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Ccc---------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7642110 000 001123567888999987666554 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEc
Q 000787 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1286)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1286)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.... +.+|+.++|+..++.+++|+|++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999875433 455555888889999999999999999998764
No 372
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.6e-33 Score=360.06 Aligned_cols=210 Identities=26% Similarity=0.388 Sum_probs=177.5
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++++|++|+++. ..+.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 46999999999852 12469999999999999999999999999999999999876 468999999988
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+.+ ..+++.+|||+|++.++. .|++||+.++. ++.+. +.++++++..++.+.. |+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 643 457889999999998875 69999998641 12232 3467788888876543 4556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999986 4677999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 799999985
No 373
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=331.21 Aligned_cols=205 Identities=20% Similarity=0.294 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC----c----cccceEEEecCCCC-
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----F----VPQRTAAYISQHDN- 236 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 236 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 4999999999999999999999999999999999999997 9999999988642 1 12357999999863
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-cccccc
Q 000787 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1286)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1286)
.+...||+||+.|+....+.. . .+....++.+++.++|+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN-K---------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 233469999998865322110 0 00112345678889995 455544
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|
T Consensus 148 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 -----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999876533 455666788888999999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000787 396 ILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1286)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 374
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=325.55 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=179.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.++++|+++.+. ...+|+|+||++++|+++||+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 488999998873 235899999999999999999999999999999999986531 1369999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.++.. ...++.++|++|+..+++ .|++||+.+....... .+..+..+.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87521 234567999999988877 8999999886433211 12233456688899999985432222222 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC-
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1084 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~g- 1084 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++. .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999997 588899999999863
Q ss_pred ---cEEEEeCCC
Q 000787 1085 ---GQEIYVGPL 1093 (1286)
Q Consensus 1085 ---G~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999986
No 375
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=326.69 Aligned_cols=221 Identities=22% Similarity=0.247 Sum_probs=178.5
Q ss_pred CceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEE
Q 000787 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITI 929 (1286)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i 929 (1286)
...++++|+++.+. ++.+|+|+||.|++||+++|+|+||||||||+++|+|.... .+.+|+|.+
T Consensus 23 ~~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i 89 (272)
T PRK14236 23 QTALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRL 89 (272)
T ss_pred CcEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEE
Confidence 34688999998873 24699999999999999999999999999999999998642 136899999
Q ss_pred cCccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000787 930 SGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1286)
Q Consensus 930 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1286)
+|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+......+. .
T Consensus 90 ~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~ 165 (272)
T PRK14236 90 DGQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-N 165 (272)
T ss_pred CCEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-C
Confidence 9987642 2346689999999888875 99999988653321 112233345688899999886421111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1005 ~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
+..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++++ +.|||+++|+++ ++.+.+|++++|++
T Consensus 166 ~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~- 242 (272)
T PRK14236 166 AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM- 242 (272)
T ss_pred cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-
Confidence 467999999999999999999999999999999999999999999999975 799999999986 47788999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 243 G~i~~~g~~ 251 (272)
T PRK14236 243 GKLVEYGDT 251 (272)
T ss_pred CEEEecCCH
Confidence 799999875
No 376
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=320.25 Aligned_cols=201 Identities=22% Similarity=0.385 Sum_probs=168.0
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHHHHHH
Q 000787 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1286)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1286)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999998 9999999998754332 357999999998999999999998
Q ss_pred HHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhH
Q 000787 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1286)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1286)
++.... .... ......++++++.+||++..++.+ ..|||||
T Consensus 94 ~~~~~~-~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNPG-LKLN---------------------------------AAQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred cccccc-cCCC---------------------------------HHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 753210 0000 001123567889999987776655 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcC
Q 000787 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1286)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1286)
||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.+++|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999876533 4455557888889999999999999999999999
Q ss_pred hhHHH
Q 000787 409 RELVL 413 (1286)
Q Consensus 409 ~~~~~ 413 (1286)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 377
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=323.81 Aligned_cols=212 Identities=21% Similarity=0.304 Sum_probs=167.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCC--Cc---cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMD--EF---VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~--~~---~~~~~~~yv~Q~d~~~ 238 (1286)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ ...+|+|+++|+++. .. ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 4999999999999999999999999999999999999862 013899999999875 21 1235799999999899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+.+||+||+.++....+..... .+....++++++.+||....... -+
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDR-LN 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhh-hc
Confidence 9999999998865322110000 00112345677788874321111 12
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++..++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 3 45666788888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 378
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=325.42 Aligned_cols=216 Identities=21% Similarity=0.286 Sum_probs=178.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc-e--EEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~-~--~~G~i~i~g 931 (1286)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + ..|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899988773 246999999999999999999999999999999999976532 2 479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. .....+.++.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999988654332 1223344556788999998842 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 467999999999999999999999999999999999999999999999865 699999999997 5888999999997
Q ss_pred c----CcEEEEeCCC
Q 000787 1083 R----GGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~----gG~~~y~G~~ 1093 (1286)
. .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999986
No 379
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=326.78 Aligned_cols=208 Identities=24% Similarity=0.396 Sum_probs=170.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 21 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 97 (265)
T PRK10253 21 TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDIT 97 (265)
T ss_pred EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCc
Confidence 4999999999999999999999999999999999999998 9999999998754332 356999999998888999
Q ss_pred HHHHHHHHhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 243 VRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 243 V~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
|+||+.++..-. ...... .+.....++++++.+||++..++. +
T Consensus 98 v~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (265)
T PRK10253 98 VQELVARGRYPHQPLFTRW-------------------------------RKEDEEAVTKAMQATGITHLADQS-----V 141 (265)
T ss_pred HHHHHHhCcccccccccCC-------------------------------CHHHHHHHHHHHHHcCCHHHhcCC-----c
Confidence 999998753100 000000 000112356788899998765554 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|+|++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999876432 455666788888999999999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 380
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-35 Score=332.12 Aligned_cols=237 Identities=24% Similarity=0.333 Sum_probs=189.7
Q ss_pred HHHhhhhcCCC-CCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEE
Q 000787 103 LKNRIDRVGID-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLT 181 (1286)
Q Consensus 103 ~~~~~~~~~~~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~ 181 (1286)
..++.+...+. .....|.|+|+++.+++ .++||+|+|+.+++|+++
T Consensus 246 v~d~pda~~L~~~~~g~v~F~~V~F~y~~---------------------------------~r~iL~~isf~i~~g~tv 292 (497)
T COG5265 246 VSDAPDAPPLWPVRLGAVAFINVSFAYDP---------------------------------RRPILNGISFTIPLGKTV 292 (497)
T ss_pred hccCCCCccccccccceEEEEEEEeeccc---------------------------------cchhhcCccccccCccEE
Confidence 34444433333 33567999999999864 235999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCc
Q 000787 182 LLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 258 (1286)
Q Consensus 182 ~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~ 258 (1286)
+++||+|+||||++++|-++++++ +|.|+++|+++.+.. .++.||.|||+..+| +-|+..|+.|+. +..
T Consensus 293 AiVg~SG~gKsTI~rllfRFyD~~---sG~I~id~qdir~vtq~slR~aIg~VPQDtvLF-NDti~yni~ygr----~~a 364 (497)
T COG5265 293 AIVGESGAGKSTILRLLFRFYDVN---SGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLF-NDTIAYNIKYGR----PDA 364 (497)
T ss_pred EEEeCCCCcHHHHHHHHHHHhCCc---CceEEEcchhHHHhHHHHHHHHhCcCcccceeh-hhhHHHHHhccC----ccc
Confidence 999999999999999999999998 999999999986543 357899999965555 569999999875 222
Q ss_pred hhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHH
Q 000787 259 RYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMM 338 (1286)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al 338 (1286)
..+....+++..+. ... +..|++++||.||+++.+ |||||||||+|||++
T Consensus 365 t~eev~aaa~~aqi---------------------------~~f--i~~lP~gy~t~Vgerglk-lSggekqrvaiar~i 414 (497)
T COG5265 365 TAEEVGAAAEAAQI---------------------------HDF--IQSLPEGYDTGVGERGLK-LSGGEKQRVAIARTI 414 (497)
T ss_pred cHHHHHHHHHHhhh---------------------------hHH--HHhCchhhhcccchheee-ccCchHHHHHHHHHH
Confidence 22222222221111 111 335899999999999997 999999999999999
Q ss_pred hcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHH
Q 000787 339 VGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 339 ~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+.+|+||++||.||+||+.|.+.|...|++.+ .++|+++.. |+..+.--+|.|+||++|+|++.|++++++.
T Consensus 415 lk~p~il~~deatsaldt~te~~iq~~l~~~~--~~rttlvia--hrlsti~~adeiivl~~g~i~erg~h~~ll~ 486 (497)
T COG5265 415 LKNPPILILDEATSALDTHTEQAIQAALREVS--AGRTTLVIA--HRLSTIIDADEIIVLDNGRIVERGTHEELLA 486 (497)
T ss_pred hcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh--CCCeEEEEe--ehhhhccCCceEEEeeCCEEEecCcHHHHHH
Confidence 99999999999999999999999999999875 345555533 3566777899999999999999999999986
No 381
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=326.71 Aligned_cols=209 Identities=24% Similarity=0.368 Sum_probs=170.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1286)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 4999999999999999999999999999999999999988 9999999988654322 357999999988889999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|.||+.++.... .... +. . . ......++.+++.+||++..++.+ .
T Consensus 102 v~e~l~~~~~~~-~~~~--------------~~-~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 146 (265)
T PRK10575 102 VRELVAIGRYPW-HGAL--------------GR-F-G-------------AADREKVEEAISLVGLKPLAHRLV-----D 146 (265)
T ss_pred HHHHHHhCcccc-cccc--------------cC-C-C-------------HHHHHHHHHHHHHcCCHHHhcCCc-----c
Confidence 999998753110 0000 00 0 0 001123567888999987666554 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+.+|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 699999999999999999999999999999999999999999999876433 4455667888889999999999999999
Q ss_pred EEEEcChhHHH
Q 000787 403 IVYQGPRELVL 413 (1286)
Q Consensus 403 iv~~G~~~~~~ 413 (1286)
+++.|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999987653
No 382
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-34 Score=319.42 Aligned_cols=204 Identities=27% Similarity=0.425 Sum_probs=171.1
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHHH
Q 000787 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRE 245 (1286)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1286)
+|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765332 467999999998899999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000787 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1286)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1286)
|+.++....+... .+....+.++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988643221100 001123456788899987766554 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEE
Q 000787 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1286)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1286)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++....+ ++|+.++|+.+++.+.+|+|++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFG-VTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998755334 455557778888999999999999999999
Q ss_pred EcChhHHH
Q 000787 406 QGPRELVL 413 (1286)
Q Consensus 406 ~G~~~~~~ 413 (1286)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 383
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3e-34 Score=319.62 Aligned_cols=205 Identities=27% Similarity=0.410 Sum_probs=170.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-cceEEEecCCCCCCCCCCHH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1286)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 4999999999999999999999999999999999999987 9999999998765433 36799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCC
Q 000787 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1286)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1286)
||+.+.....+... ......++++++.+++....++.+ +.|
T Consensus 91 enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 99988654321100 000123466788899976666544 469
Q ss_pred ChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEE
Q 000787 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1286)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1286)
|||||||++||++|+.+|++++|||||+|||..+...+.+.|+++.. ..+.+|+.++|...++.+++|+|++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 32344555677778899999999999999999
Q ss_pred EEcChhHHH
Q 000787 405 YQGPRELVL 413 (1286)
Q Consensus 405 ~~G~~~~~~ 413 (1286)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988764
No 384
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=357.27 Aligned_cols=218 Identities=26% Similarity=0.331 Sum_probs=183.9
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|++++++ ++.+|+|+||+|.+|+++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 77889988773 2469999999999999999999999999999999999876 45899999998753
Q ss_pred hh----cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..++.++|++|++.+++.+||+|++.|+...+.. ...+.++.+++++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245699999999888999999999986432210 11223344567889999999988777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||+++|+++ ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 47788999999985 799999
Q ss_pred CCCCc
Q 000787 1091 GPLGR 1095 (1286)
Q Consensus 1091 G~~~~ 1095 (1286)
|+...
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 98753
No 385
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.8e-34 Score=317.98 Aligned_cols=211 Identities=23% Similarity=0.336 Sum_probs=176.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.+... .+.+.+|+|+||++++|+++||+|+||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888776310 012579999999999999999999999999999999999875 46899999998753
Q ss_pred h------hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
. ...++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 2 1245679999999988888999999998654321 133445556789999999998777765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
+|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 4688999999986 554
No 386
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.7e-35 Score=364.24 Aligned_cols=256 Identities=21% Similarity=0.304 Sum_probs=193.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.+......+|+.++++.+++. .+ .....+....+++|+|+++.++.
T Consensus 280 ~~~~~~a~~ri~~ll~~~~~~-----~~--~~~~~~~~~~~I~~~~v~~~y~~--------------------------- 325 (569)
T PRK10789 280 VERGSAAYSRIRAMLAEAPVV-----KD--GSEPVPEGRGELDVNIRQFTYPQ--------------------------- 325 (569)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cC--CCCCCCCCCCcEEEEEEEEECCC---------------------------
Confidence 556777888888887665431 00 00011112346999999998742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
.+..+|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|+
T Consensus 326 -----~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 326 -----TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred -----CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 1124899999999999999999999999999999999999998 9999999999876543 4679999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.+++ .|++|||.++.. ....+.+.++.+. .++ ++ ....|+++.||
T Consensus 398 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~---~~l------------------------~~--~i~~lp~gl~t 443 (569)
T PRK10789 398 PFLFS-DTVANNIALGRP----DATQQEIEHVARL---ASV------------------------HD--DILRLPQGYDT 443 (569)
T ss_pred Ceecc-ccHHHHHhcCCC----CCCHHHHHHHHHH---cCC------------------------HH--HHHhCcCcccc
Confidence 76665 699999987531 1111111111111 000 00 12357788899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+. .||||||||++||||++++|++++|||||++||+.++..+.+.|+++. .++|+|++ +|+. +....+|+
T Consensus 444 ~~~~~g~-~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~i-tH~~-~~~~~~d~ 518 (569)
T PRK10789 444 EVGERGV-MLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVIIS-AHRL-SALTEASE 518 (569)
T ss_pred eecCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEE-ecch-hHHHcCCE
Confidence 9998654 699999999999999999999999999999999999999999998853 45666664 4443 45677999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++.+|+++++.+
T Consensus 519 i~~l~~G~i~~~g~~~~l~~ 538 (569)
T PRK10789 519 ILVMQHGHIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEeCCEEEEecCHHHHHH
Confidence 99999999999999998864
No 387
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=332.88 Aligned_cols=221 Identities=18% Similarity=0.230 Sum_probs=180.1
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 930 (1286)
..++++|+++.+.. +.+.+|+|||++|++||++||+|+|||||||||++|+|.... .+..|.|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46899999988742 124699999999999999999999999999999999997531 2357999999
Q ss_pred CccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCC-HHHHHHHHHHHHHHcCCCcccccccCCCC
Q 000787 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVD-SETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1286)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~-~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 1004 (1286)
|.++.. ..+++.++||+|++.+++ .|++||+.|+.... ..+ .+..++.++++++.++|.+-.+..++..
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~- 222 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA- 222 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-
Confidence 998742 235678999999988775 79999999864321 122 2223445788899988754333334433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1005 ~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
...||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++
T Consensus 223 ~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~- 299 (329)
T PRK14257 223 GNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ- 299 (329)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 468999999999999999999999999999999999999999999999875 699999999987 47778999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|+++..|++
T Consensus 300 G~i~e~g~~ 308 (329)
T PRK14257 300 GWIEEAGET 308 (329)
T ss_pred CEEEEeCCH
Confidence 799999986
No 388
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=328.68 Aligned_cols=216 Identities=24% Similarity=0.303 Sum_probs=181.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++.. ....+|+|||+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47889998887411 12358999999999999999999999999999999999876 4689999999876
Q ss_pred Ch---hcccceEEEeccCCC-CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ...++.+||++|++. .++..||.||+.+..... ....++..++++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 566789999998864322 223444456789999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++|||+|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999874 4 46999999986 78999
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 9875
No 389
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-34 Score=317.09 Aligned_cols=194 Identities=31% Similarity=0.459 Sum_probs=159.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCC-CCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 240 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1286)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 35999999999999999999999999999999999999998 999999998875432 2357999999864 4678
Q ss_pred CCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccc
Q 000787 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1286)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1286)
+||+||+.++....+... .+....++++++.+||++..+..+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999988643221100 001123566788999986665544
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++..++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998764 3 45566678888899999999999999
Q ss_pred Ce
Q 000787 401 GQ 402 (1286)
Q Consensus 401 G~ 402 (1286)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 390
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.6e-35 Score=373.30 Aligned_cols=257 Identities=24% Similarity=0.373 Sum_probs=196.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.+..++|+.++++.+++. +..+....+.....++|+||++.+..
T Consensus 421 ~~~~~~~~~ri~~~l~~~~e~------~~~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 467 (694)
T TIGR01846 421 FQQTGIALERLGDILNSPTEP------RSAGLAALPELRGAITFENIRFRYAP--------------------------- 467 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCc------cCCCCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 568888899999988776551 00011111222457999999999842
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
..+.+|+|+|++++||+.++|+|+||||||||+++|+|.++|+ +|+|++||+++++... ++.++||+|+
T Consensus 468 -----~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~ 539 (694)
T TIGR01846 468 -----DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQE 539 (694)
T ss_pred -----CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccC
Confidence 1124899999999999999999999999999999999999998 9999999999887654 4789999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.++ +.|++|||.++. +....+.+.++++.. ..++.+ -.|+.+.||
T Consensus 540 ~~lf-~~ti~eNi~~~~----~~~~~~~i~~a~~~~---------------------------~l~~~i--~~lp~gl~t 585 (694)
T TIGR01846 540 NVLF-SRSIRDNIALCN----PGAPFEHVIHAAKLA---------------------------GAHDFI--SELPQGYNT 585 (694)
T ss_pred Ceeh-hhhHHHHHhcCC----CCCCHHHHHHHHHHc---------------------------ChHHHH--HhCcCccCc
Confidence 6555 579999998753 111122222222111 011222 236778899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+ .+||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .+.|+|+ ++|.. +....+|+
T Consensus 586 ~i~~~g-~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~-itH~~-~~~~~~d~ 660 (694)
T TIGR01846 586 EVGEKG-ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVII-IAHRL-STVRACDR 660 (694)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEE-EeCCh-HHHHhCCE
Confidence 999865 5799999999999999999999999999999999999999999998863 3455555 55554 44567999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++++|+++++++
T Consensus 661 ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 661 IIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999865
No 391
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=339.76 Aligned_cols=195 Identities=24% Similarity=0.360 Sum_probs=168.5
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------cccceEEEecCCCCCCCCCC
Q 000787 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1286)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999886431 12467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.|+.+.. ....++++++.+||++..+..+ .
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998864200 0113566788999987766554 5
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999876533 4556668888899999999999999999
Q ss_pred EEEEcChhHHH
Q 000787 403 IVYQGPRELVL 413 (1286)
Q Consensus 403 iv~~G~~~~~~ 413 (1286)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999874
No 392
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=322.22 Aligned_cols=216 Identities=23% Similarity=0.277 Sum_probs=175.7
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCce---EEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~---~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+|+||.|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 367788887763 2469999999999999999999999999999999999865322 379999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.++.. ..+++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 2345679999999999998999999987643221 1122333455677777777642 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999987 4777899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 799999875
No 393
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.2e-34 Score=324.10 Aligned_cols=213 Identities=21% Similarity=0.282 Sum_probs=174.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc--eEEEEEEEcCc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGY 932 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~ 932 (1286)
.++++|+++.++ +.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 588899988762 24899999999999999999999999999999999987531 16799999998
Q ss_pred cCChhcc-cceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc---ccccccCCCCCC
Q 000787 933 PKKQETF-ARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP---LRQSLVGLPGVS 1006 (1286)
Q Consensus 933 ~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~~g~~~~~ 1006 (1286)
++..... ++.++||+|++. +.+..|+.+++.+.+.... ... .+++++++++.+++.+ ..+.. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 7643222 357999999974 4466799998876433221 111 2356889999999976 23443 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
.||||||||++|||+|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999987 47788999999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 99999875
No 394
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=325.42 Aligned_cols=215 Identities=24% Similarity=0.319 Sum_probs=170.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc--------ccceEEEecCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--------PQRTAAYISQHDNH 237 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~~ 237 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (262)
T PRK09984 18 QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNL 97 (262)
T ss_pred EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcccccc
Confidence 4999999999999999999999999999999999999875223699999998874321 13569999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++.+||+||+.+...... . ..... ... ...+....++++++.+||++..|..+
T Consensus 98 ~~~~tv~e~l~~~~~~~~---~------~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~- 150 (262)
T PRK09984 98 VNRLSVLENVLIGALGST---P------FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV- 150 (262)
T ss_pred ccCCcHHHHHHhhhcccc---c------chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc-
Confidence 999999999987642100 0 00000 000 00011234677899999987666554
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
..|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++||.++|+..++..++|+|++
T Consensus 151 ----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~~ 225 (262)
T PRK09984 151 ----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIVA 225 (262)
T ss_pred ----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999876533 45666678888889999999999
Q ss_pred ecCCeEEEEcChhHH
Q 000787 398 LSDGQIVYQGPRELV 412 (1286)
Q Consensus 398 L~~G~iv~~G~~~~~ 412 (1286)
|++|++++.|+++++
T Consensus 226 l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 226 LRQGHVFYDGSSQQF 240 (262)
T ss_pred EECCEEEEeCCHHHh
Confidence 999999999998764
No 395
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=324.44 Aligned_cols=208 Identities=26% Similarity=0.400 Sum_probs=169.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|+..+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (255)
T PRK11231 16 RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGIT 92 (255)
T ss_pred EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCcc
Confidence 4999999999999999999999999999999999999987 999999998765432 2356999999988888899
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.++..-.. ... ... .......++++++.+||++..++.+ .
T Consensus 93 v~~~i~~~~~~~~--~~~----------------~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 137 (255)
T PRK11231 93 VRELVAYGRSPWL--SLW----------------GRL------------SAEDNARVNQAMEQTRINHLADRRL-----T 137 (255)
T ss_pred HHHHHHhccchhh--hhc----------------cCC------------CHHHHHHHHHHHHHcCCHHHHcCCc-----c
Confidence 9999988631000 000 000 0001123567888999987666554 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+.+|++++|++|+
T Consensus 138 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 138 DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 6999999999999999999999999999999999999999999998754 3 4456667888889999999999999999
Q ss_pred EEEEcChhHHH
Q 000787 403 IVYQGPRELVL 413 (1286)
Q Consensus 403 iv~~G~~~~~~ 413 (1286)
+++.|+.+++.
T Consensus 216 i~~~~~~~~~~ 226 (255)
T PRK11231 216 VMAQGTPEEVM 226 (255)
T ss_pred EEEEcCHHHhc
Confidence 99999987763
No 396
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.7e-34 Score=314.98 Aligned_cols=199 Identities=21% Similarity=0.347 Sum_probs=165.0
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc-ccceEEEecCCCCCCCCCCHHH
Q 000787 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVRE 245 (1286)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1286)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999998 999999999875432 2467999999998999999999
Q ss_pred HHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCC
Q 000787 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1286)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1286)
|+.+..... .... ......++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~-~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPG-LKLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhcc-CCcc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 998753210 0000 001123566888999987666544 4699
Q ss_pred hhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEE
Q 000787 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1286)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1286)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+++|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998754 334556667888889999999999999999999
Q ss_pred EcC
Q 000787 406 QGP 408 (1286)
Q Consensus 406 ~G~ 408 (1286)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 397
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.6e-34 Score=324.39 Aligned_cols=215 Identities=24% Similarity=0.261 Sum_probs=176.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 933 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1286)
.++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 478899988763 2369999999999999999999999999999999999876 467999999986
Q ss_pred ----CCh---hc----ccceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000787 934 ----KKQ---ET----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 999 (1286)
Q Consensus 934 ----~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 999 (1286)
+.. .. .++.++|++|++. +.+.+|+.|++.+...... .....+.+..++++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 432 11 2346999999974 5677899999876432211 1122334556889999999963 44544
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEE
Q 000787 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1286)
Q Consensus 1000 ~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~ 1078 (1286)
+..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999986 466789999
Q ss_pred EEEecCcEEEEeCCC
Q 000787 1079 FLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1079 ~lL~~gG~~~y~G~~ 1093 (1286)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799999875
No 398
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=323.60 Aligned_cols=208 Identities=22% Similarity=0.310 Sum_probs=166.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CCCceeEEEEcCccCCCc-----cccceEEEecCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP-----TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~-----~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1286)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++| + +|+|+++|+++... ..++.++|++|++
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 109 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRV---TGKITLDGEDIYDPRLDVVELRARVGMVFQKP 109 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---ceEEEECCEECcccccchHHHhhceEEEecCC
Confidence 499999999999999999999999999999999999874 5 89999999887531 1246799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
.+++ .||+||+.|+....+..... .+....++++++.+||.+.....
T Consensus 110 ~~~~-~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 156 (267)
T PRK14235 110 NPFP-KSIYENVAYGPRIHGLARSK--------------------------------AELDEIVETSLRKAGLWEEVKDR 156 (267)
T ss_pred CCCC-CcHHHHHHHHHHhcccccch--------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 49999999875432210000 00112356678888986422111
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
. +..++.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ + .+|+.++|+..++..++|++
T Consensus 157 ~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v 232 (267)
T PRK14235 157 L-HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRT 232 (267)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEE
Confidence 1 234567999999999999999999999999999999999999999999998743 3 45555778888999999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000787 396 ILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1286)
++|++|+++.+|+.+++.
T Consensus 233 ~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 233 AFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 399
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.4e-34 Score=321.05 Aligned_cols=201 Identities=24% Similarity=0.318 Sum_probs=167.1
Q ss_pred EeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc--eEEEEEEEcCccCChhcc-cceEEEeccCCC--CCCCCC
Q 000787 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 957 (1286)
Q Consensus 883 iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 957 (1286)
+|+|+|+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999987520 158999999987654322 357999999974 556789
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC---cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000787 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN---PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1286)
Q Consensus 958 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~---~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEP 1034 (1286)
+.|++.+...... . ..+..+++++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG--K-LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC--c-cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999987643321 1 1233456689999999997 344443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1035 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1035 TsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999764 899999999987 57788999999985 799998875
No 400
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=323.30 Aligned_cols=229 Identities=17% Similarity=0.248 Sum_probs=177.9
Q ss_pred CCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHH
Q 000787 113 DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKT 192 (1286)
Q Consensus 113 ~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 192 (1286)
+.|...++++|+++.+.. .++|+|+|++|++|++++|+||||||||
T Consensus 8 ~~~~~~l~~~~l~~~~~~----------------------------------~~il~~isl~i~~Ge~~~i~G~nGsGKS 53 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYGK----------------------------------FHALKNINLDIAKNQVTAFIGPSGCGKS 53 (260)
T ss_pred cCCCceEEEEEEEEEeCC----------------------------------eEEeeceeEEEcCCCEEEEECCCCCCHH
Confidence 456777899999987621 2499999999999999999999999999
Q ss_pred HHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----cccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHH
Q 000787 193 TLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTE 265 (1286)
Q Consensus 193 TLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 265 (1286)
|||++|+|.++ |....+|+|.++|.++... ..++.++|++|++.+++ +||+||+.++..... +...
T Consensus 54 TLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~-~~~~----- 126 (260)
T PRK10744 54 TLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE-KLSR----- 126 (260)
T ss_pred HHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC-CCCH-----
Confidence 99999999986 2101289999999887421 12467999999887777 899999988653221 0000
Q ss_pred HHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccc
Q 000787 266 LARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALAL 345 (1286)
Q Consensus 266 ~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vl 345 (1286)
.+....++++++.+||........ ++....||||||||++||++|+.+|++|
T Consensus 127 ---------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~ll 178 (260)
T PRK10744 127 ---------------------------AEMDERVEWALTKAALWNEVKDKL-HQSGYSLSGGQQQRLCIARGIAIRPEVL 178 (260)
T ss_pred ---------------------------HHHHHHHHHHHHHcCCChhhHHHH-hcCCCCCCHHHHHHHHHHHHHHCCCCEE
Confidence 001123566788888743211111 2334579999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHH
Q 000787 346 FMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 346 lLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
+|||||+|||+.++..+.+.|+++. .+ ++||.++|+..++.+++|+|++|++|+++..|+.+++.
T Consensus 179 lLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 179 LLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999873 33 45666778888899999999999999999999988764
No 401
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=357.61 Aligned_cols=218 Identities=25% Similarity=0.302 Sum_probs=183.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+||||+|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 378889988763 2469999999999999999999999999999999999875 4589999999875
Q ss_pred Chh----cccceEEEeccCCCCCCCCCHHHHHHHHHhhh----cCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLR----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
... ..++.+|||+|++.+++.+||+|++.++.... .....+.++.+++++++++.++|.+..+..+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 421 12356999999998889999999998753211 0001123344567899999999988777764 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
+|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999986 47788999999985 79
Q ss_pred EEEeCCCC
Q 000787 1087 EIYVGPLG 1094 (1286)
Q Consensus 1087 ~~y~G~~~ 1094 (1286)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 99999874
No 402
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.6e-34 Score=316.89 Aligned_cols=194 Identities=24% Similarity=0.396 Sum_probs=160.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-----cccceEEEecCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGE 240 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~ 240 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.
T Consensus 14 ~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 14 HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 4999999999999999999999999999999999999988 99999999887421 124679999999988899
Q ss_pred CCHHHHHHHHhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
+||+||+.++.. ..+... .+....++.+++.+||++..++.+
T Consensus 91 ~t~~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 133 (213)
T cd03262 91 LTVLENITLAPIKVKGMSK----------------------------------AEAEERALELLEKVGLADKADAYP--- 133 (213)
T ss_pred CcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhhCc---
Confidence 999999988642 111000 001123566788899987666544
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+++|+|++|+
T Consensus 134 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l~ 209 (213)
T cd03262 134 --AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFMD 209 (213)
T ss_pred --cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 56999999999999999999999999999999999999999999998764 3 4455667888899999999999999
Q ss_pred CCeE
Q 000787 400 DGQI 403 (1286)
Q Consensus 400 ~G~i 403 (1286)
+|++
T Consensus 210 ~g~i 213 (213)
T cd03262 210 DGRI 213 (213)
T ss_pred CCcC
Confidence 9974
No 403
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=321.87 Aligned_cols=219 Identities=20% Similarity=0.238 Sum_probs=175.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.++++|+++.+. ++.+|+|+|++|.+|++++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 377888888763 245999999999999999999999999999999999986531 2369999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.+... ..+++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 86532 2346779999999988875 999999987543311 11223345577788888875321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999987 47788999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999875
No 404
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.1e-34 Score=323.45 Aligned_cols=207 Identities=29% Similarity=0.435 Sum_probs=169.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 15 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 15 LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 346999999987788899
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.++.... . ... . .+ ..+....++++++.+||.+..++.+ .
T Consensus 92 v~e~l~~~~~~~----~-----~~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 136 (256)
T TIGR03873 92 VRDVVALGRIPH----R-----SLW------A-GD--------------SPHDAAVVDRALARTELSHLADRDM-----S 136 (256)
T ss_pred HHHHHHhcchhh----h-----hhc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc-----c
Confidence 999998753100 0 000 0 00 0001124567888999976666554 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+++|+|++|++|+
T Consensus 137 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 137 TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 6999999999999999999999999999999999999999999998753 3 4556667888889999999999999999
Q ss_pred EEEEcChhHH
Q 000787 403 IVYQGPRELV 412 (1286)
Q Consensus 403 iv~~G~~~~~ 412 (1286)
+++.|+.+++
T Consensus 215 i~~~g~~~~~ 224 (256)
T TIGR03873 215 VVAAGPPREV 224 (256)
T ss_pred EEEecCHHHh
Confidence 9999998875
No 405
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.8e-35 Score=365.51 Aligned_cols=257 Identities=23% Similarity=0.369 Sum_probs=194.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++.+...+|+.++++.+++. .. +....+.....++++||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~~-----~~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 342 (571)
T TIGR02203 297 MQRGLAAAESLFTLLDSPPEK-----DT--GTRAIERARGDVEFRNVTFRYPG--------------------------- 342 (571)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CC--CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 667788888888887655441 00 00011112346999999999843
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
...++|+|+|+++++|+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 343 -----~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 414 (571)
T TIGR02203 343 -----RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQD 414 (571)
T ss_pred -----CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccC
Confidence 1124999999999999999999999999999999999999998 9999999999876653 4679999997
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+. +++.|++|||.++..- ....+.+.++.+.. -.++.+ -.|++..||
T Consensus 415 ~~-lf~~Ti~~Ni~~~~~~---~~~~~~i~~~l~~~---------------------------~l~~~i--~~lp~gldt 461 (571)
T TIGR02203 415 VV-LFNDTIANNIAYGRTE---QADRAEIERALAAA---------------------------YAQDFV--DKLPLGLDT 461 (571)
T ss_pred cc-cccccHHHHHhcCCCC---CCCHHHHHHHHHHc---------------------------ChHHHH--HhCcCcccc
Confidence 75 5567999999876310 11111222221110 011122 236777899
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+ +.||||||||++||||++++|+|++||||||+||+.++..|.+.|++.. .++|+|++ +|+. +..+.||+
T Consensus 462 ~i~~~g-~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~tiIii-tH~~-~~~~~~D~ 536 (571)
T TIGR02203 462 PIGENG-VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGRTTLVI-AHRL-STIEKADR 536 (571)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCCEEEEE-ehhh-HHHHhCCE
Confidence 999875 4699999999999999999999999999999999999999999998753 34566554 4443 66788999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++..|+++++.+
T Consensus 537 ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 537 IVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999998864
No 406
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.2e-34 Score=319.43 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=167.5
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC----CCCceeEEEEcCccCCCcccc-ceEEEecCCCC--CCC
Q 000787 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDN--HIG 239 (1286)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~--~~~ 239 (1286)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++.....+ +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999988 6 99999999987654332 57999999874 557
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+|+.|++.+.....+... .+....++++++.+||++.. ...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~--~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPE--EVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchH--HHHhC
Confidence 7899999987543211100 00112456788999997420 11233
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
.+..|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ ..+++|+.++|+.+++..++|+|++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4457999999999999999999999999999999999999999999998754 334556667888889999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|+++..|+++++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988764
No 407
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.5e-34 Score=363.87 Aligned_cols=223 Identities=22% Similarity=0.380 Sum_probs=177.3
Q ss_pred eEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHH
Q 000787 117 VEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLL 196 (1286)
Q Consensus 117 ~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~ 196 (1286)
..++++|+++.++. + .++|+|+|++++||+.++|+|+||||||||++
T Consensus 333 ~~I~~~~vsf~y~~------------------------------~---~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~ 379 (588)
T PRK13657 333 GAVEFDDVSFSYDN------------------------------S---RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLIN 379 (588)
T ss_pred CeEEEEEEEEEeCC------------------------------C---CceecceeEEECCCCEEEEECCCCCCHHHHHH
Confidence 46999999999842 1 23899999999999999999999999999999
Q ss_pred HHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhc
Q 000787 197 ALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1286)
Q Consensus 197 ~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1286)
+|+|+++|+ +|+|.+||.++++... ++.++||+|++.+| +.|++|||.++.. ....+.+.++.+..
T Consensus 380 lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~Ti~~Ni~~~~~----~~~d~~i~~al~~~--- 448 (588)
T PRK13657 380 LLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRSIEDNIRVGRP----DATDEEMRAAAERA--- 448 (588)
T ss_pred HHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-cccHHHHHhcCCC----CCCHHHHHHHHHHh---
Confidence 999999998 9999999999887654 47899999987655 5799999987631 11111122211110
Q ss_pred CCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCC
Q 000787 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1286)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsg 353 (1286)
..++.++ .|++..||.+|+.+ +.||||||||++|||+|+++|+|++||||||+
T Consensus 449 ------------------------~l~~~i~--~lp~gldt~i~~~g-~~LSgGq~QRialARall~~~~iliLDEpts~ 501 (588)
T PRK13657 449 ------------------------QAHDFIE--RKPDGYDTVVGERG-RQLSGGERQRLAIARALLKDPPILILDEATSA 501 (588)
T ss_pred ------------------------CHHHHHH--hCcccccchhcCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccC
Confidence 0111222 36777899999864 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHHH
Q 000787 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 354 LD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
||+.++..|.+.|++.. .++|+|+ ++|+. +..+.+|+|++|++|+++..|+++++.+
T Consensus 502 LD~~t~~~i~~~l~~~~--~~~tvIi-itHr~-~~~~~~D~ii~l~~G~i~~~g~~~~l~~ 558 (588)
T PRK13657 502 LDVETEAKVKAALDELM--KGRTTFI-IAHRL-STVRNADRILVFDNGRVVESGSFDELVA 558 (588)
T ss_pred CCHHHHHHHHHHHHHHh--cCCEEEE-EEecH-HHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 99999999999998753 3456555 44543 5678899999999999999999998864
No 408
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-34 Score=322.50 Aligned_cols=230 Identities=20% Similarity=0.272 Sum_probs=180.4
Q ss_pred CCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcH
Q 000787 112 IDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGK 191 (1286)
Q Consensus 112 ~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 191 (1286)
++.+...++++||++.+.. +++|+|+|+++++|++++|+|||||||
T Consensus 14 ~~~~~~~l~~~nl~~~~~~----------------------------------~~il~~vsl~i~~Ge~~~I~G~nGsGK 59 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYGK----------------------------------KEAIKGIDMQFEKNKITALIGPSGSGK 59 (267)
T ss_pred cCCCCeEEEEeeEEEEECC----------------------------------eeeEeeeEEEEcCCCEEEEECCCCCCH
Confidence 3445567999999987621 249999999999999999999999999
Q ss_pred HHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----cccceEEEecCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhH
Q 000787 192 TTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLT 264 (1286)
Q Consensus 192 STLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 264 (1286)
||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++....+....
T Consensus 60 STLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~----- 133 (267)
T PRK14237 60 STYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDK----- 133 (267)
T ss_pred HHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCH-----
Confidence 99999999998641 01289999999987532 12457999999887777 6999999886532211000
Q ss_pred HHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChhHhhHHHHHHHHhcCCcc
Q 000787 265 ELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALA 344 (1286)
Q Consensus 265 ~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~v 344 (1286)
+.....+.++++.++|.++.+... +..++.||||||||++||++|+.+|++
T Consensus 134 ----------------------------~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~G~~qrl~laral~~~p~l 184 (267)
T PRK14237 134 ----------------------------KVLDEIVETSLKQAALWDQVKDDL-HKSALTLSGGQQQRLCIARAIAVKPDI 184 (267)
T ss_pred ----------------------------HHHHHHHHHHHHHcCCCchhhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 001123456788888864332222 345668999999999999999999999
Q ss_pred ceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEcChhHHH
Q 000787 345 LFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 345 llLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+.+++.+++|+|++|++|++++.|+.+++.
T Consensus 185 llLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 185 LLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999873 33 45666778888999999999999999999999998763
No 409
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-34 Score=324.61 Aligned_cols=204 Identities=22% Similarity=0.289 Sum_probs=168.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCC-CCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 21 NQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 4999999999999999999999999999999999999998 999999999875432 2467999999864 67789
Q ss_pred CHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccccc
Q 000787 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1286)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1286)
||.||+.++....+.. + .+....++++++.+||.+..++. +
T Consensus 98 tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 138 (277)
T PRK13642 98 TVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTRE-----P 138 (277)
T ss_pred CHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCC-----c
Confidence 9999998764321110 0 00112456778889998766654 4
Q ss_pred CCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCC
Q 000787 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1286)
Q Consensus 322 ~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1286)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++. .+|+|++|++|
T Consensus 139 ~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tiil~sH~~~~~~-~~d~i~~l~~G 216 (277)
T PRK13642 139 ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE-KYQLTVLSITHDLDEAA-SSDRILVMKAG 216 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH-hCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998764 32445555778878875 69999999999
Q ss_pred eEEEEcChhHHH
Q 000787 402 QIVYQGPRELVL 413 (1286)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1286)
+++..|+++++.
T Consensus 217 ~i~~~g~~~~~~ 228 (277)
T PRK13642 217 EIIKEAAPSELF 228 (277)
T ss_pred EEEEeCCHHHHh
Confidence 999999998875
No 410
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2e-34 Score=319.52 Aligned_cols=202 Identities=27% Similarity=0.325 Sum_probs=165.8
Q ss_pred eeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCCHHHHH
Q 000787 168 LKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETL 247 (1286)
Q Consensus 168 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1286)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999998 9999999998765432 248999999889999999999
Q ss_pred HHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCCCChh
Q 000787 248 AFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGG 327 (1286)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1286)
.++......+.. ..+....++++++.+||++..++.+ ..||||
T Consensus 76 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDLS--------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCCC--------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 886321000000 0001123567888999987666554 469999
Q ss_pred HhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeEEEEc
Q 000787 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1286)
Q Consensus 328 qkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1286)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++.+.+|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999876533 445566788888999999999999999999988
Q ss_pred ChhHH
Q 000787 408 PRELV 412 (1286)
Q Consensus 408 ~~~~~ 412 (1286)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 411
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=322.20 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=177.7
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITIS 930 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~ 930 (1286)
..+..+++++.+. ++.+|+|+|++++|||++||+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 4566777766652 35799999999999999999999999999999999998652 1 258999999
Q ss_pred CccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 000787 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1286)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 1005 (1286)
|.++.. ..+++.++|++|++.++ .+|++||+.+....+. . ..+..+.++++++.+++.+..+...+. ..
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987532 23456799999998877 5999999998754432 1 123345688999999986433222221 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe---
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK--- 1082 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~--- 1082 (1286)
..||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 6799999999999999999999999999999999999999999999985 4799999999987 4778999999996
Q ss_pred ----cCcEEEEeCCC
Q 000787 1083 ----RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ----~gG~~~y~G~~ 1093 (1286)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 45899999985
No 412
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.2e-34 Score=324.01 Aligned_cols=207 Identities=22% Similarity=0.258 Sum_probs=169.0
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCCCC--CCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN--HIG 239 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1286)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 45999999999999999999999999999999999999998 9999999988753221 246999999864 567
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc-ccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGD 318 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1286)
.+||.|++.+..+....... .+....++.+++.+||. +..+..
T Consensus 103 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLEP---------------------------------EQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCChHHHhcC---
Confidence 88999999886543210000 00112456788999994 445543
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|+..++..++|+|++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 35699999999999999999999999999999999999999999999876533 455566788888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 413
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.5e-34 Score=317.04 Aligned_cols=199 Identities=29% Similarity=0.460 Sum_probs=159.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccccceEEEecCCCCCC--CCCCH
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHI--GEMTV 243 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lTV 243 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. +.+||
T Consensus 13 ~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 13 PVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 5999999999999999999999999999999999999998 999999998764 2346799999987653 34899
Q ss_pred HHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccCC
Q 000787 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1286)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1286)
+||+.++..... . ..... .......++.+++.+||++..++.+ ..
T Consensus 88 ~e~l~~~~~~~~-~-~~~~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 132 (213)
T cd03235 88 RDVVLMGLYGHK-G-LFRRL----------------------------SKADKAKVDEALERVGLSELADRQI-----GE 132 (213)
T ss_pred HHHHHhcccccc-c-cccCC----------------------------CHHHHHHHHHHHHHcCCHHHHhCCc-----cc
Confidence 999988642110 0 00000 0001124567888999987666544 46
Q ss_pred CChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCeE
Q 000787 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1286)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1286)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++||.++|+..++.+++|+|++|++| +
T Consensus 133 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~-~ 209 (213)
T cd03235 133 LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT-V 209 (213)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-E
Confidence 999999999999999999999999999999999999999999998764 3 455666788888999999999999886 6
Q ss_pred EEEc
Q 000787 404 VYQG 407 (1286)
Q Consensus 404 v~~G 407 (1286)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03235 210 VASG 213 (213)
T ss_pred eecC
Confidence 6554
No 414
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=319.81 Aligned_cols=208 Identities=19% Similarity=0.277 Sum_probs=166.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEEcCccCCCcc---ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|+++|+++.... .++.++|++|++.+++
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~ 92 (246)
T PRK14269 16 QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV 92 (246)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCcccc
Confidence 49999999999999999999999999999999999975 45 899999999876532 2457999999987776
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.||+||+.++....+.... .......++.+++.+||........ ++
T Consensus 93 -~tv~eni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~ 138 (246)
T PRK14269 93 -KSIYENISYAPKLHGMIKN--------------------------------KDEEEALVVDCLQKVGLFEEVKDKL-KQ 138 (246)
T ss_pred -ccHHHHhhhHHhhcCcccC--------------------------------hHHHHHHHHHHHHHcCCChhhhHHh-cC
Confidence 6999999986533211000 0001123456788888853211111 23
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
..+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+|++|+
T Consensus 139 ~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~ 215 (246)
T PRK14269 139 NALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--HN-LSMIMVTHNMQQGKRVADYTAFFH 215 (246)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--CC-CEEEEEecCHHHHHhhCcEEEEEE
Confidence 456799999999999999999999999999999999999999999999864 24 456667888889999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~g~~~~~~ 229 (246)
T PRK14269 216 LGELIEFGESKEFF 229 (246)
T ss_pred CCEEEEECCHHHHH
Confidence 99999999988764
No 415
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=321.54 Aligned_cols=219 Identities=24% Similarity=0.252 Sum_probs=176.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... +..|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478899988763 246999999999999999999999999999999999975321 2479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.++.. ...++.++|++|++.+++. ||+||+.|....+.. ......++.+.++++.+++.+......+. .+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHD-SAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhc-Chh
Confidence 87542 2345679999999988874 999999987544321 12233455678889988875311111111 146
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 47788999999986 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9998875
No 416
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.7e-34 Score=337.49 Aligned_cols=199 Identities=25% Similarity=0.413 Sum_probs=169.3
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------cccceEEEecCCCCCCCCCC
Q 000787 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1286)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999998 99999999887432 12467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
|+||+.|+.+... . . +....++++++.+||++..+..+ .
T Consensus 92 v~enl~~~~~~~~--~-----~-----------------------------~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P-----S-----------------------------ERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h-----h-----------------------------HHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998753210 0 0 01123567889999987776554 4
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecCCe
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1286)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999876533 4455667888899999999999999999
Q ss_pred EEEEcChhHHH
Q 000787 403 IVYQGPRELVL 413 (1286)
Q Consensus 403 iv~~G~~~~~~ 413 (1286)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998774
No 417
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=320.08 Aligned_cols=209 Identities=19% Similarity=0.274 Sum_probs=165.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCC---CCCCCCceeEEEEcCccCCCcc-----ccceEEEecCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGK---LDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNH 237 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|. .++. ..+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 17 HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 499999999999999999999999999999999997 3431 12899999999875421 23579999999877
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++ .||+||+.++.+..+.... ......++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999887543211000 001123566788888864322222
Q ss_pred ccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEE
Q 000787 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1286)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+|++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEEE
Confidence 23456799999999999999999999999999999999999999999999873 34 4556678888899999999999
Q ss_pred ecCCeEEEEcChhHHH
Q 000787 398 LSDGQIVYQGPRELVL 413 (1286)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1286)
|++|++++.|+++++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998874
No 418
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=324.30 Aligned_cols=215 Identities=20% Similarity=0.257 Sum_probs=175.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1286)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999998773 2469999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.+... ..+++.++|++|++.+++. |++||+.+..... ........++.+.++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYA--GERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87532 1345679999999888774 9999998764322 11122233456788888888852 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999965 689999999986 4778999999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 419
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.3e-34 Score=314.30 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=172.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 488899987763 2369999999999999999999999999999999999876 4579999999876
Q ss_pred ChhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
.....++.++|++|++.+++.+|++|++.+....+. . ..++.++++++.++|.+..+..+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988888999999988654321 1 12345678899999987777653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999999888999999999997 5888999999986
No 420
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=326.58 Aligned_cols=215 Identities=20% Similarity=0.270 Sum_probs=175.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1286)
.+.++++++.++ .+.+|+|+|++|++||+++|+|+|||||||||++|+|... + .+..|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578999988773 2359999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 1002 (1286)
.++.. ...++.++|++|++.+++. ||+||+.|....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 86532 1245679999999888774 999999986533211 12233345678888888874 223332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 421
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=324.22 Aligned_cols=219 Identities=23% Similarity=0.287 Sum_probs=178.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1286)
.+.++|+++.++ .+.+|+||||+|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478899998874 24699999999999999999999999999999999997652 13689999999
Q ss_pred ccCCh----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 000787 932 YPKKQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1286)
Q Consensus 932 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 1007 (1286)
.++.. ...++.++|++|++.+++ .|++||+.+..... ...+.++....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234567999999988877 89999998764322 112334444567788999998653221111 12467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 000787 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1286)
Q Consensus 1008 lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~ 1087 (1286)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57788999999985 799
Q ss_pred EEeCCC
Q 000787 1088 IYVGPL 1093 (1286)
Q Consensus 1088 ~y~G~~ 1093 (1286)
++.|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 422
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=5.3e-33 Score=354.42 Aligned_cols=122 Identities=24% Similarity=0.311 Sum_probs=102.2
Q ss_pred CCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhhCC---CEEEE
Q 000787 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1031 (1286)
Q Consensus 956 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p---~il~L 1031 (1286)
+||.|++.|...+. . .....+.++.+||... .+.. ...||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 78999988865432 1 1124678999999753 3443 3579999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-----cCcEEEEeCCC
Q 000787 1032 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1286)
Q Consensus 1032 DEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~-----~gG~~~y~G~~ 1093 (1286)
||||+|||+.....+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 346899999995 47899999985
No 423
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.3e-35 Score=367.61 Aligned_cols=210 Identities=24% Similarity=0.401 Sum_probs=176.6
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+||++.+. +++.+|+|+|++|+||+++||+|+||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986543 1246999999999999999999999999999999999987 3 47999999987
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 1003 (1286)
+.+ ..+++.++||+|++.++. -|++||+.++. ++.++ +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 643 457789999999998876 59999999852 23333 346777777776543 35667765
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
| ..||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999885 5899999999985 4678999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 799999874
No 424
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.4e-34 Score=313.06 Aligned_cols=199 Identities=23% Similarity=0.291 Sum_probs=165.4
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ .+.+|+|||++|++||++||+|+||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45677877663 2469999999999999999999999999999999999876 46899999998753
Q ss_pred h--hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 000787 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1286)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 1013 (1286)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..+++++++++.++|.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988888999999988754321 1 2235688999999998777665 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 000787 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1286)
Q Consensus 1014 qrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL 1081 (1286)
||++||++|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++. +...-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~-i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLP-VASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhh-hccCCceEEec
Confidence 99999999999999999999999999999999999999998779999999999863 44433565554
No 425
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-34 Score=315.66 Aligned_cols=223 Identities=23% Similarity=0.329 Sum_probs=181.1
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC-C--ceEEEEEEEcCc
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYITGNITISGY 932 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~-~--~~~~G~i~i~g~ 932 (1286)
++.+|++.++.... +...+++||||++++||++||+|.||||||||.++|.|..+ + ....|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 46678776665421 23579999999999999999999999999999999999775 2 246689999998
Q ss_pred cCC---hh---c-ccceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCCC-CHHHHHHHHHHHHHHcCCCcccccccCC
Q 000787 933 PKK---QE---T-FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEV-DSETRKMFIDEVMELVELNPLRQSLVGL 1002 (1286)
Q Consensus 933 ~~~---~~---~-~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~-~~~~~~~~v~~~l~~l~l~~~~~~~~g~ 1002 (1286)
++- .+ . ..+.++|++|++. +.|.+||.+.+.=...... .. .+++..+++.++|+.+++.+-....-.-
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~--~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y 150 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHG--KGLSKKEAKERAIELLELVGIPDPERRLKSY 150 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhh--cchhhHHHHHHHHHHHHHcCCCCHHHHHhhC
Confidence 642 22 1 2357999999975 6788999877665443322 12 3556677889999999998643222112
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEE
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~-~g~tvi~t~H~ps~~i~~~~D~~~lL 1081 (1286)
+.+|||||||||.||.||+.+|++||.||||++||...+++|+++|+++.+ .|.|+|++|||+.. +.+++|||.+|
T Consensus 151 --PhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VM 227 (316)
T COG0444 151 --PHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVM 227 (316)
T ss_pred --CcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEE
Confidence 468999999999999999999999999999999999999999999999986 59999999999974 88999999999
Q ss_pred ecCcEEEEeCCC
Q 000787 1082 KRGGQEIYVGPL 1093 (1286)
Q Consensus 1082 ~~gG~~~y~G~~ 1093 (1286)
.. |++|..|+.
T Consensus 228 Ya-G~iVE~g~~ 238 (316)
T COG0444 228 YA-GRIVEEGPV 238 (316)
T ss_pred EC-cEEEEeCCH
Confidence 95 899999996
No 426
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-34 Score=393.03 Aligned_cols=257 Identities=19% Similarity=0.226 Sum_probs=197.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhh-hcCCC-CC-ceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhH
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRID-RVGID-LP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1286)
.+....++||+.++.+.++|.- ...+ ....+ -| ..+|+|+||++.|..
T Consensus 1199 ~e~~~~sveRi~e~~~~~~E~~-----~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~------------------------ 1249 (1622)
T PLN03130 1199 AENSLNAVERVGTYIDLPSEAP-----LVIENNRPPPGWPSSGSIKFEDVVLRYRP------------------------ 1249 (1622)
T ss_pred HHHHHHHHHHHHHHhCCCCccc-----ccccCCCCCCCCCCCCcEEEEEEEEEeCC------------------------
Confidence 3677888999999887665510 0000 00111 12 357999999999842
Q ss_pred hhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEe
Q 000787 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1286)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1286)
...++|+|+|++|+|||.+||+|++|||||||+++|.|+++|+ +|+|.+||.++++... |+.++||
T Consensus 1250 --------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~---~G~I~IDG~dI~~i~l~~LR~~IsiV 1318 (1622)
T PLN03130 1250 --------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELE---RGRILIDGCDISKFGLMDLRKVLGII 1318 (1622)
T ss_pred --------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCEecccCCHHHHHhccEEE
Confidence 1124999999999999999999999999999999999999998 9999999999987654 5789999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000787 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1286)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1286)
||++.+|. .||||||.++.. ...+.+.+++++.. ..+. +-.|+.+
T Consensus 1319 pQdp~LF~-GTIreNLd~~~~-----~tdeei~~Al~~a~---------------------------l~~~--I~~lp~G 1363 (1622)
T PLN03130 1319 PQAPVLFS-GTVRFNLDPFNE-----HNDADLWESLERAH---------------------------LKDV--IRRNSLG 1363 (1622)
T ss_pred CCCCcccc-ccHHHHhCcCCC-----CCHHHHHHHHHHcC---------------------------cHHH--HHhCccc
Confidence 99887765 699999986421 12222333322211 0111 2246778
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000787 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1286)
Q Consensus 312 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1286)
.||.||+.+. .||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++| ++++.|.. ++...
T Consensus 1364 Ldt~Vge~G~-nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~--~~~T-vI~IAHRL-~tI~~ 1438 (1622)
T PLN03130 1364 LDAEVSEAGE-NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCT-MLIIAHRL-NTIID 1438 (1622)
T ss_pred cCccccCCCC-CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCE-EEEEeCCh-HHHHh
Confidence 8999998665 599999999999999999999999999999999999999999999753 3444 44466654 45566
Q ss_pred cCcEEEecCCeEEEEcChhHHHH
Q 000787 392 FDDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|+|++|++|+|+++|+++++++
T Consensus 1439 ~DrIlVLd~G~IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1439 CDRILVLDAGRVVEFDTPENLLS 1461 (1622)
T ss_pred CCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999875
No 427
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=321.34 Aligned_cols=211 Identities=22% Similarity=0.335 Sum_probs=166.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 49999999999999999999999999999999999987410 1289999999887421 1246799999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+.+||+||+.++....+.... ......++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 999999999887543211000 001123566778888742111111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++||.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK--QD-YTIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 23 45666788888999999999999
Q ss_pred c------CCeEEEEcChhHHH
Q 000787 399 S------DGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~------~G~iv~~G~~~~~~ 413 (1286)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 79999999988764
No 428
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=325.98 Aligned_cols=218 Identities=22% Similarity=0.391 Sum_probs=175.6
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 588999988773 12469999999999999999999999999999999999876 4689999999876
Q ss_pred ChhcccceEEEeccCCCCC--CCCCHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 000787 935 KQETFARISGYCEQNDIHS--PFVTIYESLLFSAWLRL-SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1286)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~f~a~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 1011 (1286)
.....++.++|++|++.+. ...+++|++.++..... .........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997653 23478888865421100 001111233456788999999988777654 569999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1012 qrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 477889999777 4 7999999
Q ss_pred CCC
Q 000787 1092 PLG 1094 (1286)
Q Consensus 1092 ~~~ 1094 (1286)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 429
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.2e-32 Score=363.00 Aligned_cols=135 Identities=22% Similarity=0.263 Sum_probs=109.2
Q ss_pred CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000787 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1027 (1286)
Q Consensus 952 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~ia~~L~---~~p~ 1027 (1286)
.+...||.|+|.++..-........++..+++ ++++.+||.++ .+.. ...||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44567999999887653221112233445556 58899999875 4554 3579999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-----cCcEEEEeCCCC
Q 000787 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPLG 1094 (1286)
Q Consensus 1028 il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~-----~gG~~~y~G~~~ 1094 (1286)
+|+|||||+|||+.+...+++.|++++++|.|||+++|++.. + +.+|++++|. .||+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~-i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHV-V-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 999999999999999999999999998889999999999863 4 8999999996 368999999863
No 430
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.4e-33 Score=356.51 Aligned_cols=213 Identities=27% Similarity=0.411 Sum_probs=178.2
Q ss_pred CceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc
Q 000787 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1286)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1286)
...++++|++|.++. +.+.+|+|+|++|+||+.+||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 346999999999852 22458999999999999999999999999999999999876 46899999999
Q ss_pred cCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCC
Q 000787 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGL 1002 (1286)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 1002 (1286)
++++ ..+++.++||+|++.+++ .|++||+.++. ++.+. +.++++++..++.+. .|+.+|.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 8653 456788999999988876 69999998742 12232 345667777776543 3555555
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
. ..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +|+|+|+++|+++ ..+.+|++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 4 46899999999999999999999999999999999999999999999985 5899999999996 456799999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 6 799999985
No 431
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=320.70 Aligned_cols=215 Identities=24% Similarity=0.319 Sum_probs=175.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1286)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|...+ . +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478899988773 24699999999999999999999999999999999997641 1 2589999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 234567999999988776 799999987643321 1122333456788999999842 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 467999999999999999999999999999999999999999999999854 799999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 432
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.2e-34 Score=360.79 Aligned_cols=257 Identities=22% Similarity=0.348 Sum_probs=190.5
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1286)
.++....++|+.++.+.+++ ..+..+....+.+..+++|+||++.++.
T Consensus 299 ~~~~~~~~~ri~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 346 (585)
T TIGR01192 299 IFEARAKLEDFFDLEDSVFQ-----REEPADAPELPNVKGAVEFRHITFEFAN--------------------------- 346 (585)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCccCCCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 35666777777777665433 1000010111222346999999998732
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecCC
Q 000787 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1286)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1286)
+ .++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|+
T Consensus 347 ---~---~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 417 (585)
T TIGR01192 347 ---S---SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQD 417 (585)
T ss_pred ---C---CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 23899999999999999999999999999999999999998 9999999998876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccc
Q 000787 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1286)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1286)
+.++ +.|++|||.++.. ....+...++++.. + .++. ...+++..||
T Consensus 418 ~~lf-~~ti~~Ni~~~~~----~~~~~~~~~a~~~~---~------------------------~~~~--i~~l~~g~~t 463 (585)
T TIGR01192 418 AGLF-NRSIRENIRLGRE----GATDEEVYEAAKAA---A------------------------AHDF--ILKRSNGYDT 463 (585)
T ss_pred CccC-cccHHHHHhcCCC----CCCHHHHHHHHHHh---C------------------------cHHH--HHhccccccc
Confidence 7666 5799999988631 11111112211110 0 0111 2235667789
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
.+|+.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++.. .++|+|+ ++|..+.+ ..+|+
T Consensus 464 ~~~~~~-~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~--~~~tvI~-isH~~~~~-~~~d~ 538 (585)
T TIGR01192 464 LVGERG-NRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR--KNRTTFI-IAHRLSTV-RNADL 538 (585)
T ss_pred hhcCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EEcChHHH-HcCCE
Confidence 998764 4699999999999999999999999999999999999999999998752 3455555 55555444 67999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000787 395 IILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1286)
|++|++|+++..|+++++.+
T Consensus 539 i~~l~~G~i~~~g~~~~l~~ 558 (585)
T TIGR01192 539 VLFLDQGRLIEKGSFQELIQ 558 (585)
T ss_pred EEEEECCEEEEECCHHHHHH
Confidence 99999999999999998864
No 433
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4e-33 Score=357.16 Aligned_cols=212 Identities=27% Similarity=0.429 Sum_probs=179.5
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+|++|+|+. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999876 468999999988
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+.+ ..+++.++||+|++.++. .|++||+.++. ++.+. +.++++++..++.+.. |+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYADD----EEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCCH----HHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 653 457889999999998876 59999998742 12333 3467778887776543 4556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
...||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 36799999999999999999999999999999999999999999999886 4899999999996 4688999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 799999974
No 434
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-35 Score=315.35 Aligned_cols=201 Identities=25% Similarity=0.309 Sum_probs=182.2
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---c-ccceEEEeccCCCCC
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---E---T-FARISGYCEQNDIHS 953 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~-~~~~~gyv~Q~~~~~ 953 (1286)
..-++|+|++|+.||++.|||-||||||||+++|.+... +..|+|+++|.++.. . . .++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 456899999999999999999999999999999999876 578999999987532 1 2 345789999999999
Q ss_pred CCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000787 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1286)
Q Consensus 954 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDE 1033 (1286)
|+.||.||..|+..++ .++++++++++.++|+.+||.++.+..+ .+||||+||||.|||||+++|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999997766 4678999999999999999999999884 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1034 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1034 PTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|+|.|||--+..+++.|.++.++ .+|||++|||.. |.+.+-|||.+|+ +|+++-.|.+
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp 249 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTP 249 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCH
Confidence 99999999999999999988654 899999999997 6889999999998 5899999987
No 435
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=318.94 Aligned_cols=210 Identities=20% Similarity=0.326 Sum_probs=165.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcc-----ccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14270 18 QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPF 97 (251)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcC
Confidence 4899999999999999999999999999999999998751 013899999999875321 245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ +||+||+.|.....+.... .+....++.+++.+||.+...... +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14270 98 P-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL-K 142 (251)
T ss_pred C-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 7 8999999987543221000 001123455677888742111111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.. + .+|+.++|+..++.+.+|+|++|
T Consensus 143 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l 219 (251)
T PRK14270 143 KSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFF 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45555778888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 220 LMGDLIEFNKTEKIF 234 (251)
T ss_pred ECCeEEEeCCHHHHh
Confidence 999999999998764
No 436
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=319.44 Aligned_cols=219 Identities=24% Similarity=0.306 Sum_probs=174.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1286)
.+.++|+++.++ .+.+|+|+|++|.+||++||+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 378899988763 2469999999999999999999999999999999999743 11 2479999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.......... .+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHE-SAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhc-Ccc
Confidence 87531 234567999999988887 6999999886543321 12222334567788888774211111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GN 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 589999999987 47788999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14255 225 LIEFADT 231 (252)
T ss_pred EEEeCCH
Confidence 9999875
No 437
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.2e-34 Score=312.64 Aligned_cols=195 Identities=27% Similarity=0.333 Sum_probs=166.2
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4677776653 2468999999999999999999999999999999999876 457999999977532
Q ss_pred --hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
..+++.++|++|++.+++.+|++|++.+.... . .+++++++++.+++.+..++. +..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHH
Confidence 23556799999999888889999999875311 1 234578899999998777665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL 1081 (1286)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998877999999999986 577888998876
No 438
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=319.00 Aligned_cols=211 Identities=21% Similarity=0.307 Sum_probs=167.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ |+...+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14256 18 HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPF 97 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCC
Confidence 49999999999999999999999999999999999986 3111289999999887432 1246799999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+.+||+||+.++.+..+.... .+....++++++.+|+........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14256 98 PAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL-K 143 (252)
T ss_pred CcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 999999999876432110000 001123566788888854211111 1
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.. + ++||.++|+..++.+++|++++|
T Consensus 144 ~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l 220 (252)
T PRK14256 144 SNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFF 220 (252)
T ss_pred CCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45566778888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 221 YMGDLVECGETKKIF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 439
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.2e-34 Score=320.38 Aligned_cols=206 Identities=25% Similarity=0.383 Sum_probs=167.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCcc-----CCCccc-------cceEEEecC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 4999999999999999999999999999999999999998 9999999987 654322 246999999
Q ss_pred CC--CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-
Q 000787 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1286)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1286)
++ .+.+.+|+.||+.+.....+.. .. .+....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~--------------------------------~~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY--------------------------------GDIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH--------------------------------HHHHHHHHHHHHHcCCChh
Confidence 86 3577889999997643211000 00 001123567788999963
Q ss_pred cccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000787 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1286)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1286)
..++. +..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.. ..+.+|+.++|+..++.+
T Consensus 144 ~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHH
Confidence 44443 456999999999999999999999999999999999999999999998754 334566668888899999
Q ss_pred hcCcEEEecCCeEEEEcChhHHH
Q 000787 391 LFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988764
No 440
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=318.73 Aligned_cols=210 Identities=21% Similarity=0.348 Sum_probs=164.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++||+|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 49999999999999999999999999999999999854 4212389999999887431 1246799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ +||+||+.++....+.... + .....++++++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-Q--------------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 8999999987543221000 0 01123455677777743211111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+.+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998742 3 45666788888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998764
No 441
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-34 Score=322.68 Aligned_cols=216 Identities=19% Similarity=0.231 Sum_probs=175.6
Q ss_pred CceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCc---eEEEEEEE
Q 000787 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITI 929 (1286)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i 929 (1286)
+..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..... +..|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (274)
T PRK14265 18 HSVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLY 84 (274)
T ss_pred CceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEE
Confidence 34688999998873 246999999999999999999999999999999999975321 24799999
Q ss_pred cCccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccccc
Q 000787 930 SGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLV 1000 (1286)
Q Consensus 930 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~ 1000 (1286)
+|.++.. ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.++++++.+++.. ..+..
T Consensus 85 ~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~- 158 (274)
T PRK14265 85 RDRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK- 158 (274)
T ss_pred CCEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC-
Confidence 9987531 2345679999999887764 99999988643321 11 122345677888888742 22322
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEE
Q 000787 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1286)
Q Consensus 1001 g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~l 1080 (1286)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++
T Consensus 159 ----~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~ 232 (274)
T PRK14265 159 ----GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAF 232 (274)
T ss_pred ----cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEE
Confidence 467999999999999999999999999999999999999999999999965 799999999997 57889999999
Q ss_pred Ee--------cCcEEEEeCCC
Q 000787 1081 MK--------RGGQEIYVGPL 1093 (1286)
Q Consensus 1081 L~--------~gG~~~y~G~~ 1093 (1286)
|+ +.|++++.|+.
T Consensus 233 l~~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 233 FNTEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred EecccccccccCceEEEeCCH
Confidence 97 25899999986
No 442
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5e-34 Score=314.89 Aligned_cols=192 Identities=27% Similarity=0.352 Sum_probs=160.5
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCH
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 958 (1286)
+++.+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 44679999999999999999999999999999999999876 468999999975421 1112334567899
Q ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000787 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1286)
Q Consensus 959 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgL 1038 (1286)
+||+.+....+. .+..+.++.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999988654321 233444556888999999988777654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 000787 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1286)
Q Consensus 1039 D~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G 1091 (1286)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998877899999999986 46778999999985 7887765
No 443
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6e-34 Score=322.74 Aligned_cols=224 Identities=25% Similarity=0.330 Sum_probs=179.8
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
+.++|+++.++... ..+. ..++.+|+|+||+|++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888888764100 0000 013569999999999999999999999999999999999865 46899999998653
Q ss_pred h------hcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000787 936 Q------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1286)
. ...++.++|++|++ .+.+..|+.|++.+..... .....++....++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12456799999997 3567789999987653211 1223444556789999999996 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
.||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999986 47778999999985 7
Q ss_pred EEEEeCCCC
Q 000787 1086 QEIYVGPLG 1094 (1286)
Q Consensus 1086 ~~~y~G~~~ 1094 (1286)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999999864
No 444
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.9e-34 Score=353.11 Aligned_cols=220 Identities=22% Similarity=0.340 Sum_probs=181.8
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|||+++++|+++||+||||||||||+++|+|..++++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788887763 24699999999999999999999999999999999998753235899999998764
Q ss_pred hh----cccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCC
Q 000787 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLS 1009 (1286)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~lS 1009 (1286)
.. ..++.+|||+|++.+++.+||+|++.+....+... ....++.+++++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 31 12356999999998889999999998864332111 122334456788999999997654 333 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||||+||++|+.+|+||||||||+|||+.+...+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999987 47788999999986 79999
Q ss_pred eCCCCc
Q 000787 1090 VGPLGR 1095 (1286)
Q Consensus 1090 ~G~~~~ 1095 (1286)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 988753
No 445
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.2e-34 Score=353.85 Aligned_cols=211 Identities=21% Similarity=0.308 Sum_probs=181.3
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899998873 2469999999999999999999999999999999999875 4589999999875
Q ss_pred Chh---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
... . .++.+||++|++.+++.+||+|++.|... . ..+.+++++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 421 1 22468999999999999999999988531 1 1233456889999999988777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
||||||+||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 47788999999986 799999
Q ss_pred CCCC
Q 000787 1091 GPLG 1094 (1286)
Q Consensus 1091 G~~~ 1094 (1286)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9874
No 446
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.2e-33 Score=318.16 Aligned_cols=205 Identities=23% Similarity=0.279 Sum_probs=165.5
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC----CCCceeEEEEcCccCCCccc-cceEEEecCCCC--CCC
Q 000787 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDN--HIG 239 (1286)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1286)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|.++..... ++.++||+|++. +.+
T Consensus 18 il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~ 94 (254)
T PRK10418 18 LVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNP 94 (254)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccCc
Confidence 89999999999999999999999999999999999988 6 9999999998754322 257999999864 446
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.+|+.+++.+.+...+... ....+..+++.+||.+.. +.. +.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~l~~~~l~~~~-~~~-~~ 136 (254)
T PRK10418 95 LHTMHTHARETCLALGKPA------------------------------------DDATLTAALEAVGLENAA-RVL-KL 136 (254)
T ss_pred cccHHHHHHHHHHHcCCCh------------------------------------HHHHHHHHHHHcCCCChh-hhh-hc
Confidence 6899999876432211100 012346678889987521 111 23
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
.+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+.+|++++|+
T Consensus 137 ~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~ 215 (254)
T PRK10418 137 YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMS 215 (254)
T ss_pred CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEE
Confidence 34579999999999999999999999999999999999999999999987653 34556667888888999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (254)
T PRK10418 216 HGRIVEQGDVETLF 229 (254)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988764
No 447
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-33 Score=311.51 Aligned_cols=202 Identities=19% Similarity=0.290 Sum_probs=152.6
Q ss_pred CCceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000787 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1286)
Q Consensus 852 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 931 (1286)
.|..+-.+||+|.++ +.++++++++|-|.--..+||+||||.||||||++|.|... +..|+..-|.
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKnh 648 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKNH 648 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhccc
Confidence 344677889988875 45689999999999999999999999999999999999876 3456554321
Q ss_pred ccCChhcccceEEEeccCC--CCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 000787 932 YPKKQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1286)
Q Consensus 932 ~~~~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 1009 (1286)
+-.+|+..|+. .+-..-|.-|.|.-.. ..+.+ .....|-.+||...++++- ++.||
T Consensus 649 --------rL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 649 --------RLRIGWFDQHANEALNGEETPVEYLQRKF------NLPYQ----EARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred --------eeeeechhhhhHHhhccccCHHHHHHHhc------CCChH----HHHHHhhhhhhhhccceEe----eeecC
Confidence 22578887763 2334456666554211 12222 2345778888988888763 57899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1010 gGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
||||-||++|-.-+..|+||||||||++||.++...+-++|+++ ...||+++||-.. |.+--..++++.+.|----
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999876 4689999999764 5555567888876554344
Q ss_pred eCCC
Q 000787 1090 VGPL 1093 (1286)
Q Consensus 1090 ~G~~ 1093 (1286)
.|..
T Consensus 783 dGdF 786 (807)
T KOG0066|consen 783 DGDF 786 (807)
T ss_pred cccH
Confidence 4443
No 448
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-34 Score=323.23 Aligned_cols=209 Identities=25% Similarity=0.394 Sum_probs=162.7
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 56778776631 12458999999999999999999999999999999999875 457999999986532
Q ss_pred ---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHH-----HHHHHHHHHc--CCCcccccccCCCCCC
Q 000787 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRK-----MFIDEVMELV--ELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~ 1006 (1286)
..+++.++|++|++.+++ .||+||+.+... ........ ...++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567999999987764 699999987421 11111100 0112333333 333222222 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++ +|+|||+++|+++. + +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLST-V-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-HhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999996 48999999999973 4 56999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999875
No 449
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=319.62 Aligned_cols=210 Identities=20% Similarity=0.320 Sum_probs=165.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|+++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 48999999999999999999999999999999999987 3212389999999987431 1245799999998877
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+. ||+||+.|.....+.... .+....++.+++.+||.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999886533211000 001123455677888753211111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
....+||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+|++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EK-YTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEEcCHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 24 45555778888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998764
No 450
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-34 Score=318.40 Aligned_cols=210 Identities=21% Similarity=0.343 Sum_probs=165.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14262 17 KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPF 96 (250)
T ss_pred eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccC
Confidence 4899999999999999999999999999999999998741 01289999999887532 1246799999998877
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ +||+||+.++....+.... + .....+++.++.+|+....+.. .+
T Consensus 97 ~-~tv~e~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14262 97 P-MSIYDNVAFGPRIHGVKSK-H--------------------------------KLDRIVEESLKKAALWDEVKSE-LN 141 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCchhHHH-Hh
Confidence 7 8999999986533211000 0 0112245567777775321111 23
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+.+||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+++|+|++|
T Consensus 142 ~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tili~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14262 142 KPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS--EN-YTIVIVTHNIGQAIRIADYIAFM 218 (250)
T ss_pred CChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh--cC-cEEEEEeCCHHHHHHhCCEEEEE
Confidence 4456799999999999999999999999999999999999999999999874 23 45666778888899999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|+++..|+++++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 219 YRGELIEYGPTREIV 233 (250)
T ss_pred ECCEEEEecCHHHHH
Confidence 999999999988764
No 451
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-34 Score=323.72 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=174.6
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 931 (1286)
.++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999988773 24699999999999999999999999999999999998642 13589999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 1002 (1286)
.++.. ...++.++|++|++.+++. ||+||+.+....+. ... ..+++++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87531 2346689999999887775 99999988654332 122 33456889999999853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEE-EE
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1081 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~-lL 1081 (1286)
+..||||||||++||++|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 467999999999999999999999999999999999999999999999976 489999999986 4777899975 56
Q ss_pred ecCcEEEEeCCC
Q 000787 1082 KRGGQEIYVGPL 1093 (1286)
Q Consensus 1082 ~~gG~~~y~G~~ 1093 (1286)
+ .|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4799998875
No 452
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=352.32 Aligned_cols=217 Identities=27% Similarity=0.329 Sum_probs=181.5
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.++ ++.+|+||||++++|++++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 377889988773 2469999999999999999999999999999999999875 4589999999875
Q ss_pred Ch----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 000787 935 KQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..+++.+||++|++.+++.+||+||+.+.............+.+++++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 32 124567999999998889999999999853211111123344456788999999998766655 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~ 1090 (1286)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999987 47788999999986 788877
Q ss_pred CCC
Q 000787 1091 GPL 1093 (1286)
Q Consensus 1091 G~~ 1093 (1286)
++.
T Consensus 222 ~~~ 224 (501)
T PRK11288 222 FDD 224 (501)
T ss_pred cCc
Confidence 653
No 453
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=317.79 Aligned_cols=210 Identities=22% Similarity=0.355 Sum_probs=163.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|++|++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 389999999999999999999999999999999998763 111389999999987531 1245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ +||+||+.++....+.... + .....++++++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-K--------------------------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999987543221000 0 01123445566777643211111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+|++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KD-YTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEEeCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999873 24 45555778888899999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 454
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.8e-34 Score=392.08 Aligned_cols=259 Identities=19% Similarity=0.229 Sum_probs=196.5
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCC-ceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1286)
.+....++||+.++.+.++|.-. ..+ .......-| ..+|+|+||++.|..
T Consensus 1196 ~~~~~~s~eRi~e~~~~~~e~~~--~~~-~~~~~~~~p~~g~I~f~nVsf~Y~~-------------------------- 1246 (1495)
T PLN03232 1196 AENSLNSVERVGNYIDLPSEATA--IIE-NNRPVSGWPSRGSIKFEDVHLRYRP-------------------------- 1246 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCccccc--ccc-CCCCCCCCCCCCcEEEEEEEEEECC--------------------------
Confidence 45677888999998876655110 000 000000112 357999999999842
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecC
Q 000787 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1286)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1286)
...++|+|+|++|+|||.++|+|++|||||||+++|.|.++|+ +|+|.+||.++.+... ++.++||||
T Consensus 1247 ------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~IdG~di~~i~~~~lR~~i~iVpQ 1317 (1495)
T PLN03232 1247 ------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELE---KGRIMIDDCDVAKFGLTDLRRVLSIIPQ 1317 (1495)
T ss_pred ------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCC---CceEEECCEEhhhCCHHHHHhhcEEECC
Confidence 1124999999999999999999999999999999999999998 9999999999987654 578999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
++.+|+ .||||||.++.. ...+.+.++.++. ++ .+. +-.+++..|
T Consensus 1318 dp~LF~-gTIr~NL~~~~~-----~sdeei~~al~~a---~l------------------------~~~--I~~lp~GLd 1362 (1495)
T PLN03232 1318 SPVLFS-GTVRFNIDPFSE-----HNDADLWEALERA---HI------------------------KDV--IDRNPFGLD 1362 (1495)
T ss_pred CCeeeC-ccHHHHcCCCCC-----CCHHHHHHHHHHc---CC------------------------HHH--HHhCcCCCC
Confidence 887775 699999986421 1122222222211 10 111 124677889
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
|.||+.+. .||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++|+ |++.|.. ++...+|
T Consensus 1363 t~v~e~G~-~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~--~~~Tv-I~IAHRl-~ti~~~D 1437 (1495)
T PLN03232 1363 AEVSEGGE-NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF--KSCTM-LVIAHRL-NTIIDCD 1437 (1495)
T ss_pred ceecCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCEE-EEEeCCH-HHHHhCC
Confidence 99998665 599999999999999999999999999999999999999999998752 34454 4466654 5566799
Q ss_pred cEEEecCCeEEEEcChhHHHH
Q 000787 394 DIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|++|++|+|++.|+++++++
T Consensus 1438 rIlVL~~G~ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1438 KILVLSSGQVLEYDSPQELLS 1458 (1495)
T ss_pred EEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999874
No 455
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.3e-33 Score=317.83 Aligned_cols=220 Identities=25% Similarity=0.316 Sum_probs=176.0
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++++++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999621124689999999875
Q ss_pred Ch---hcccc-eEEEeccCCCCCCCCCHHHHHHHHHhhhcC----CCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 000787 935 KQ---ETFAR-ISGYCEQNDIHSPFVTIYESLLFSAWLRLS----PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1286)
Q Consensus 935 ~~---~~~~~-~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 1005 (1286)
.. ....+ .++|++|++.+++.+|+.|++.+....... .+....+..+++.++++.+++. ...+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 43 12222 478999999999999999998875432110 1112223345678899999996 34454421
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCEEEEEecC
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1084 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~-~D~~~lL~~g 1084 (1286)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++. +... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-
Confidence 2599999999999999999999999999999999999999999999998779999999999863 5455 799999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999986
No 456
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=321.50 Aligned_cols=206 Identities=21% Similarity=0.313 Sum_probs=162.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCc-----cccceEEEecCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 49999999999999999999999999999999999987 35 89999999886421 1235799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
.+++ .||+||+.+++...+... + ....++.+++.+++....+..
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhh
Confidence 8777 599999998764322100 0 001234456666664211111
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
-+..+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+||.++|+..++.+++|++
T Consensus 148 -~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i 223 (269)
T PRK14259 148 -LNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--KN-FTIVIVTHNMQQAVRVSDMT 223 (269)
T ss_pred -hCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEE
Confidence 123456799999999999999999999999999999999999999999999874 23 45666788889999999999
Q ss_pred EEecC-----------CeEEEEcChhHHHH
Q 000787 396 ILLSD-----------GQIVYQGPRELVLE 414 (1286)
Q Consensus 396 ilL~~-----------G~iv~~G~~~~~~~ 414 (1286)
++|++ |++++.|+++++.+
T Consensus 224 ~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 224 AFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEeccccccccccccceEEEeCCHHHHHh
Confidence 99996 67899999988753
No 457
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.4e-34 Score=315.80 Aligned_cols=209 Identities=22% Similarity=0.347 Sum_probs=170.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899988763 2469999999999999999999999999999999999865 4689999999765
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1010 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 1010 (1286)
.. ..+++.++|++|++.+++ .|++||+.+....+.. . ..++.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567899999988876 5999999886433211 1 1234577899999995 355554 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 000787 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1286)
Q Consensus 1011 Gqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y 1089 (1286)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|+++. + +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 8999999999863 4 56999999964444444
Q ss_pred eC
Q 000787 1090 VG 1091 (1286)
Q Consensus 1090 ~G 1091 (1286)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 43
No 458
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=322.04 Aligned_cols=215 Identities=21% Similarity=0.216 Sum_probs=173.9
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 588999998774 1358999999999999999999999999999999999754 1 13689999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCC----cccccccCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 1002 (1286)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. ....+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234567999999988777 599999998653321 112223345567777777543 222222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999875 799999999987 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 459
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-34 Score=320.72 Aligned_cols=218 Identities=19% Similarity=0.240 Sum_probs=174.1
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1286)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899988773 24699999999999999999999999999999999997531 1 2579999999
Q ss_pred ccCC-----hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.++. ...+++.++|++|++.+++ .|++||+.+....+. .. ...++.++++++.+++.+..+..... .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 8652 1234567999999988777 599999988653321 11 12334567788888874311111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec---
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1083 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~--- 1083 (1286)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999987 58899999999982
Q ss_pred -----CcEEEEeCCC
Q 000787 1084 -----GGQEIYVGPL 1093 (1286)
Q Consensus 1084 -----gG~~~y~G~~ 1093 (1286)
.|++++.|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4799999875
No 460
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.1e-33 Score=318.65 Aligned_cols=215 Identities=26% Similarity=0.283 Sum_probs=173.6
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 933 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1286)
.+.++|+++.++ .+.+|+|+|++|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 377888888763 2358999999999999999999999999999999999876 468999999875
Q ss_pred ----CCh---h----cccceEEEeccCCC--CCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000787 934 ----KKQ---E----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 999 (1286)
Q Consensus 934 ----~~~---~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 999 (1286)
... . ..++.++|++|++. +.+.+|+.|++.+..... .. .......+.++++++.+++.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 321 1 12346899999974 345679999987643211 11 111233467889999999963 55554
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEE
Q 000787 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1286)
Q Consensus 1000 ~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~ 1078 (1286)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998754 899999999986 477789999
Q ss_pred EEEecCcEEEEeCCC
Q 000787 1079 FLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1079 ~lL~~gG~~~y~G~~ 1093 (1286)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 799999875
No 461
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=350.99 Aligned_cols=206 Identities=25% Similarity=0.333 Sum_probs=174.4
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEeccCCCCCCCC
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSPFV 956 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~l 956 (1286)
+.+|+||||++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999876 458999999987532 12346799999998888899
Q ss_pred CHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000787 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1286)
Q Consensus 957 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTs 1036 (1286)
||+|++.+..........+.++..++++++++.+++.+..+.. +..|||||||||+||++|+.+|++|||||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAK-----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 9999998753211111112334456788999999998777665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCc
Q 000787 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1286)
Q Consensus 1037 gLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~~ 1095 (1286)
|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999888999999999986 47788999999985 79999998743
No 462
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=318.34 Aligned_cols=207 Identities=18% Similarity=0.272 Sum_probs=162.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCcc-----ccceEEEecCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1286)
.+|+|+|+.+++|++++|+|||||||||||++|+|..+ |+ +|+|.++|+++.... .++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 49999999999999999999999999999999999864 45 899999999875321 245799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1286)
.+++. ||+||+.++....+.... . .....+...++.+++.......
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERRK-S--------------------------------VLDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCcchHHH
Confidence 77774 999999886432110000 0 0011234456677764211111
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
-+..+..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+++|+|
T Consensus 158 -~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v 233 (268)
T PRK14248 158 -LHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRT 233 (268)
T ss_pred -HhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEE
Confidence 1234557999999999999999999999999999999999999999999998742 3 45666778888899999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000787 396 ILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1286)
++|++|++++.|+.+++.
T Consensus 234 ~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 234 AFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 463
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3e-34 Score=360.86 Aligned_cols=259 Identities=24% Similarity=0.391 Sum_probs=191.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCCCCC-ceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHhh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1286)
.++.+..++|+.+.++.+++. ....+....+.+ ...++|+||++.++..
T Consensus 301 ~~~~~~~~~ri~~~l~~~~~~-----~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------------------- 350 (576)
T TIGR02204 301 LQRAAGAAERLIELLQAEPDI-----KAPAHPKTLPVPLRGEIEFEQVNFAYPAR------------------------- 350 (576)
T ss_pred HHHHHHHHHHHHHHhCCCCcC-----CCCCCCccCCcCCCceEEEEEEEEECCCC-------------------------
Confidence 456777888888877654330 000000011112 2369999999998421
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEecC
Q 000787 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1286)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1286)
..+.+|+|+|++++|||.++|+||||||||||+++|+|+++|. +|+|.+||.++++..+ ++.++||+|
T Consensus 351 ------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q 421 (576)
T TIGR02204 351 ------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQ 421 (576)
T ss_pred ------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEcc
Confidence 1135999999999999999999999999999999999999998 9999999999877654 367999999
Q ss_pred CCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccc
Q 000787 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1286)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1286)
++. +.+.|++|||.++.. ....+.+.++.+. .+ ..+.++ .+++..|
T Consensus 422 ~~~-lf~~Ti~~Ni~~~~~----~~~~~~~~~~l~~---~~------------------------l~~~i~--~l~~gl~ 467 (576)
T TIGR02204 422 DPV-LFAASVMENIRYGRP----DATDEEVEAAARA---AH------------------------AHEFIS--ALPEGYD 467 (576)
T ss_pred CCc-cccccHHHHHhcCCC----CCCHHHHHHHHHH---cC------------------------cHHHHH--hCCCCCC
Confidence 765 556799999987531 1111111111111 00 111222 2566778
Q ss_pred ccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000787 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1286)
Q Consensus 314 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1286)
|.+|+.+ ..||||||||+++|||++++|++++||||||+||+.++..+.+.|+++. .++|+|+ ++|.. +....+|
T Consensus 468 t~i~~~g-~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~--~~~t~Ii-itH~~-~~~~~~d 542 (576)
T TIGR02204 468 TYLGERG-VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM--KGRTTLI-IAHRL-ATVLKAD 542 (576)
T ss_pred ceeCCCC-CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCC
Confidence 9998764 4699999999999999999999999999999999999999999999863 3455555 55554 5567899
Q ss_pred cEEEecCCeEEEEcChhHHHH
Q 000787 394 DIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|++|++|+++..|+++++.+
T Consensus 543 ~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 543 RIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred EEEEEECCEEEeeecHHHHHH
Confidence 999999999999999998754
No 464
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.2e-34 Score=316.89 Aligned_cols=205 Identities=27% Similarity=0.413 Sum_probs=158.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1286)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++ ..|
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~t 91 (237)
T cd03252 16 VILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NRS 91 (237)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cch
Confidence 4899999999999999999999999999999999999998 999999998765432 245799999987665 579
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHc--CCcccccccccccc
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL--GLDVCADTMVGDEM 320 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~~ 320 (1286)
|+||+.+... . ...+...+... . ...+..++.+ +++...+ ..
T Consensus 92 v~~nl~~~~~--~--~~~~~~~~~~~---~------------------------~~~~~~l~~l~~~~~~~~~-----~~ 135 (237)
T cd03252 92 IRDNIALADP--G--MSMERVIEAAK---L------------------------AGAHDFISELPEGYDTIVG-----EQ 135 (237)
T ss_pred HHHHhhccCC--C--CCHHHHHHHHH---H------------------------cCcHHHHHhCcccccchhh-----cC
Confidence 9999987531 1 11111111000 0 0112334444 4433222 34
Q ss_pred cCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEecC
Q 000787 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1286)
Q Consensus 321 ~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1286)
+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+.| |+.++|+..++ ..+|+|++|++
T Consensus 136 ~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~t-iii~sH~~~~~-~~~d~v~~l~~ 211 (237)
T cd03252 136 GAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGRT-VIIIAHRLSTV-KNADRIIVMEK 211 (237)
T ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCE-EEEEeCCHHHH-HhCCEEEEEEC
Confidence 56799999999999999999999999999999999999999999999874 3444 55566777777 46999999999
Q ss_pred CeEEEEcChhHHHH
Q 000787 401 GQIVYQGPRELVLE 414 (1286)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1286)
|++++.|+.+++.+
T Consensus 212 G~i~~~~~~~~~~~ 225 (237)
T cd03252 212 GRIVEQGSHDELLA 225 (237)
T ss_pred CEEEEEcCHHHHHh
Confidence 99999999887653
No 465
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.3e-33 Score=304.55 Aligned_cols=170 Identities=41% Similarity=0.673 Sum_probs=147.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEEcCccCCCccccceEEEecCCCCCCCCCC
Q 000787 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1286)
..+|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45999999999999999999999999999999999999 887 9999999998765334577999999988889999
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccccccC
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1286)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999764210 0
Q ss_pred CCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hhHHhhcCcEEEecCC
Q 000787 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPA-PETYDLFDDIILLSDG 401 (1286)
Q Consensus 323 ~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~-~~~~~~~D~iilL~~G 401 (1286)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+.|+|+ ++|+. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999998754 3455555 55555 4788999999999999
Q ss_pred eEEEEc
Q 000787 402 QIVYQG 407 (1286)
Q Consensus 402 ~iv~~G 407 (1286)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 466
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-35 Score=297.31 Aligned_cols=206 Identities=25% Similarity=0.391 Sum_probs=179.8
Q ss_pred CceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 000787 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPF 955 (1286)
Q Consensus 879 ~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 955 (1286)
+.+.+|+++|..|++|.+++|+|||||||||||.++++... ..+|+|+++|.++.. ..+++.++..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 45789999999999999999999999999999999998765 568999999987643 4566777888898888888
Q ss_pred CCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000787 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1286)
Q Consensus 956 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPT 1035 (1286)
+||+|-+.|+..-....... ++.+..++++++.++|.+++|+.. .+||||||||.-||+.|+.+.+.++||||.
T Consensus 90 lTV~dLv~FGRfPYSqGRlt-~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPYSQGRLT-KEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcccCCCCc-hHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCcc
Confidence 99999999985433322333 455677999999999999999884 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 000787 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1286)
Q Consensus 1036 sgLD~~~~~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~~ 1094 (1286)
++||...+..+|+.||+++++ |+|||++.||.++ .-.+.|+++.|++ |++++.|++.
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~ 221 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPD 221 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHH
Confidence 999999999999999999977 9999999999885 4456799999986 7999999984
No 467
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-34 Score=301.28 Aligned_cols=168 Identities=27% Similarity=0.417 Sum_probs=148.6
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++ ...+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 4677777653 1358999999999999999999999999999999999875 458999999987542
Q ss_pred --hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 000787 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1286)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 1014 (1286)
..+++.++|++|++.+++.+|++|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888889999863 8999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1015 rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877999999999987 477789999999864
No 468
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=4.6e-34 Score=307.44 Aligned_cols=178 Identities=26% Similarity=0.336 Sum_probs=151.1
Q ss_pred eEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hcccceEEEeccCCC-CCC
Q 000787 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-----ETFARISGYCEQNDI-HSP 954 (1286)
Q Consensus 881 ~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 954 (1286)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 469999999999999999999999999999999999876 468999999987531 134567999999973 233
Q ss_pred CCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000787 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1286)
Q Consensus 955 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEP 1034 (1286)
..||+||+.+..... ..+.++..+.++++++.++|.+..+..+ ..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999999865332 1233444567889999999988777663 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 000787 1035 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1068 (1286)
Q Consensus 1035 TsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps 1068 (1286)
|+|||+.++..+.+.|++++++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 469
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=319.27 Aligned_cols=212 Identities=28% Similarity=0.373 Sum_probs=168.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----CCceeEEEEcCccCCCccc---cceEEEecCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT-----LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNH 237 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~ 237 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++..
T Consensus 15 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~~ 94 (272)
T PRK13547 15 AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQP 94 (272)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCCC
Confidence 4999999999999999999999999999999999999874 1127999999998754332 3468999998776
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccc
Q 000787 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1286)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1286)
++.+||+||+.++......... ... .+....++.+++.+||++..++.
T Consensus 95 ~~~~tv~e~l~~~~~~~~~~~~---------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~-- 142 (272)
T PRK13547 95 AFAFSAREIVLLGRYPHARRAG---------------ALT---------------HRDGEIAWQALALAGATALVGRD-- 142 (272)
T ss_pred CCCCcHHHHHhhcccccccccc---------------cCC---------------HHHHHHHHHHHHHcCcHhhhcCC--
Confidence 6779999999875311000000 000 00112456788899998655544
Q ss_pred ccccCCCChhHhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 000787 318 DEMIRGISGGQKKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1286)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~al~---------~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~ 388 (1286)
+..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|+..++
T Consensus 143 ---~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tviiisH~~~~~ 218 (272)
T PRK13547 143 ---VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDW-NLGVLAIVHDPNLA 218 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHH
Confidence 4569999999999999999 5999999999999999999999999999876432 44555577888889
Q ss_pred HhhcCcEEEecCCeEEEEcChhHHH
Q 000787 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
.+++|++++|++|++++.|+.+++.
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 219 ARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHhCCEEEEEECCeEEEecCHHHHc
Confidence 9999999999999999999988763
No 470
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=317.02 Aligned_cols=219 Identities=21% Similarity=0.271 Sum_probs=176.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1286)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367888887763 2469999999999999999999999999999999999743 1 12579999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 000787 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 1006 (1286)
.++.. ...++.++|++|++.+++. |+.||+.+...... ....+...+++.++++.+++.+........ .+.
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87532 2345679999999888874 99999987643221 112333456788899999885432122221 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999987 58888999999985 79
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999875
No 471
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=315.36 Aligned_cols=207 Identities=23% Similarity=0.330 Sum_probs=164.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14272 18 QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPF 97 (252)
T ss_pred EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccC
Confidence 49999999999999999999999999999999999987631 1379999999887531 1245799999999899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----ccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1286)
+.+|++||+.++....+... .+. ....++..++.+++. +..+
T Consensus 98 ~~~t~~enl~~~~~~~~~~~-~~~--------------------------------~~~~~~~~l~~~~l~~~l~~~~~- 143 (252)
T PRK14272 98 PTMSVFDNVVAGLKLAGIRD-RDH--------------------------------LMEVAERSLRGAALWDEVKDRLK- 143 (252)
T ss_pred cCCCHHHHHHHHHHhcCCCC-HHH--------------------------------HHHHHHHHHHHcCcchhhhhhhc-
Confidence 99999999987653221100 000 011223344555543 2223
Q ss_pred cccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCc
Q 000787 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1286)
Q Consensus 315 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1286)
..++.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+.+|+
T Consensus 144 ----~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~ 216 (252)
T PRK14272 144 ----TPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--KV-TTIIIVTHNMHQAARVSDT 216 (252)
T ss_pred ----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCE
Confidence 3345799999999999999999999999999999999999999999999874 23 5566678888899999999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000787 395 IILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1286)
|++|++|++++.|+++++.
T Consensus 217 i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 217 TSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 472
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=9.8e-34 Score=317.51 Aligned_cols=197 Identities=25% Similarity=0.372 Sum_probs=168.4
Q ss_pred EeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCCHH
Q 000787 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIY 959 (1286)
Q Consensus 883 iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 959 (1286)
+|+||||++++|++++|+|+||||||||+++|+|..+ .+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999864 37999999987542 22345689999998888889999
Q ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000787 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1032 (1286)
Q Consensus 960 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~-------~p~il~LD 1032 (1286)
||+.+.... ....++..+.++++++.++|.+..+.. +..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112233456788999999998776665 35799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 000787 1033 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1033 EPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~~~y~G~~ 1093 (1286)
|||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999986 47889999999985 799999875
No 473
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.7e-34 Score=361.67 Aligned_cols=212 Identities=29% Similarity=0.446 Sum_probs=178.8
Q ss_pred CceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc
Q 000787 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1286)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1286)
...++|+|++|.++. ++.+|+|+|+.++|||.+||+||||||||||++.|.|... +.+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCE
Confidence 346999999999862 3569999999999999999999999999999999999876 46899999998
Q ss_pred cCCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc-------ccccccCC
Q 000787 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-------LRQSLVGL 1002 (1286)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~ 1002 (1286)
+++. ..+++.++||+|++.++. -||+||+.++. ++.+++ .++++++..++.+ -.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~e----ei~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDE----EIEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHH----HHHHHHHHhChHHHHHhCcccccceecC
Confidence 8653 567889999999999887 89999999863 223333 3455555544332 35788884
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1003 ~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
. ...||||||||++||||++++|+||+||||||+||+.+...|++.++++. +|+|+|+++|+++. ...+|++++|+
T Consensus 462 ~-G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~IiVl~ 537 (567)
T COG1132 462 R-GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADRIIVLD 537 (567)
T ss_pred C-CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCEEEEEE
Confidence 3 46899999999999999999999999999999999999999999999886 67999999999964 45599999999
Q ss_pred cCcEEEEeCCC
Q 000787 1083 RGGQEIYVGPL 1093 (1286)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1286)
+ |+++..|..
T Consensus 538 ~-G~i~e~G~h 547 (567)
T COG1132 538 N-GRIVERGTH 547 (567)
T ss_pred C-CEEEEecCH
Confidence 6 789999985
No 474
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=8.7e-33 Score=310.19 Aligned_cols=173 Identities=24% Similarity=0.296 Sum_probs=136.0
Q ss_pred eecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEeccCCCCCCCCCHHHHHH
Q 000787 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1286)
Q Consensus 884 L~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 963 (1286)
|+==.+.|..||+++++||||-||||+.++|+|..+ +.+|. .. .-.++|=||.-.--...||++.|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 444467889999999999999999999999999876 34554 11 113677787654446789999765
Q ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000787 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1286)
Q Consensus 964 f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~ 1043 (1286)
-...-+... .....++++-|.|.++.+..+ .+|||||.|||+||.+|..+.++.+||||++.||++.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 432211111 123467889999999998875 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1044 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1044 ~~v~~~l~~~~~~-g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
..+-++||+...+ ++|.+++-||... +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998754 7899999999764 444668888775
No 475
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=360.88 Aligned_cols=213 Identities=22% Similarity=0.319 Sum_probs=179.4
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++++|++|.++. ..+.+|+|+|++|+||+++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999876 468999999988
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcc-------cccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 1003 (1286)
..+ ..+++.++||+|++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 653 456788999999998876 69999998752 11223 2346778888776543 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|||+++|+++ ..+.||++++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999885 4799999999985 5778999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 799999984
No 476
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=317.85 Aligned_cols=210 Identities=21% Similarity=0.316 Sum_probs=164.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
++|+|+|+.+++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998740 01289999999987531 1246799999998878
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+. ||+||+.+.....+.... + .....++++++.+++.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINNR-R--------------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 999999886543221000 0 00122455677777753211121 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
.....|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. +. +|+.++|+..++.+.+|+|++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~~-tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--KY-TIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEeCCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 34 5555778888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988763
No 477
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.9e-34 Score=322.62 Aligned_cols=211 Identities=19% Similarity=0.279 Sum_probs=174.2
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1286)
.+.++|+++.++. +...+|+|||+.|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4788999988742 12358999999999999999999999999999999999874 369999999876
Q ss_pred Ch---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCC------CCC
Q 000787 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGL------PGV 1005 (1286)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~------~~~ 1005 (1286)
.. ..+++.++||+|++.+++ .|++||+.+.. ... ++.++++++.++|.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 42 345678999999998887 49999996321 111 23467888999998766655431 134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 000787 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1286)
Q Consensus 1006 ~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG 1085 (1286)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|+++. .++|||+++|+++. + ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~~-i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIEA-M-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHHH-H-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 48999999999853 4 45999999985 7
Q ss_pred EEEEeCCCC
Q 000787 1086 QEIYVGPLG 1094 (1286)
Q Consensus 1086 ~~~y~G~~~ 1094 (1286)
++++.|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 999999863
No 478
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5e-34 Score=359.53 Aligned_cols=210 Identities=22% Similarity=0.354 Sum_probs=179.3
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++++|++|.++. ++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEE
Confidence 46999999999851 1358999999999999999999999999999999999876 457999999987
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 1003 (1286)
+.+ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4678899999999999875 9999999852 122 23478888888877543 4555553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
...||||||||++|||||+++|+||+||||||+||+.++..|++.|+++.+ ++|||+++|+|+ ....+|++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999864 699999999985 5677999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 479
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.1e-33 Score=315.43 Aligned_cols=219 Identities=26% Similarity=0.313 Sum_probs=171.2
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++ ++.+|+|+|+.|++|+++||+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56788887763 24699999999999999999999999999999999997421146899999998753
Q ss_pred h---hc-ccceEEEeccCCCCCCCCCHHHHHHHHH-hhhcC---CCCCHHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 000787 936 Q---ET-FARISGYCEQNDIHSPFVTIYESLLFSA-WLRLS---PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1286)
Q Consensus 936 ~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a-~lr~~---~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 1006 (1286)
. .. .++.++|++|++.+++.+|+.+++.+.. .++.. .........++++++++.+++. +..+..+ ..
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 2 11 2346899999988888788777654321 11110 0011223356678899999984 3444432 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCEEEEEecCc
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1085 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~-~D~~~lL~~gG 1085 (1286)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++++.|+|||+++|++.. +... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEEC-C
Confidence 699999999999999999999999999999999999999999999998778999999999863 5454 799999985 7
Q ss_pred EEEEeCCC
Q 000787 1086 QEIYVGPL 1093 (1286)
Q Consensus 1086 ~~~y~G~~ 1093 (1286)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 99999975
No 480
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=315.19 Aligned_cols=210 Identities=20% Similarity=0.330 Sum_probs=164.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
++|+|+|+.|++|++++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 49999999999999999999999999999999999986 2111289999999886431 1245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ .||+||+.++....+.... + .....++++++.++|........ +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14251 98 P-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDNL-D 142 (251)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHHh-c
Confidence 5 7999999886532211100 0 00123455677788742111111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
.....||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+.+|+|++|
T Consensus 143 ~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 219 (251)
T PRK14251 143 RNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK--HQ-YTFIMVTHNLQQAGRISDQTAFL 219 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH--cC-CeEEEEECCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 23 45666788888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|+++..|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 220 MNGDLIEAGPTEEMF 234 (251)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 481
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=315.59 Aligned_cols=209 Identities=22% Similarity=0.333 Sum_probs=163.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCC-c---cccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDE-F---VPQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~~ 239 (1286)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ ...+|+|.++|.++.. . ..++.++|++|++.+++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 96 (249)
T PRK14253 17 QALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPFP 96 (249)
T ss_pred eeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcCc
Confidence 4999999999999999999999999999999999998752 0128999999987642 1 12457999999988787
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
.||+||+.++....+.... + .....+++.++.+|+.+...... +.
T Consensus 97 -~tv~~~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~~~~~~l~~~~~~~~-~~ 141 (249)
T PRK14253 97 -MSIYENVAYGLRAQGIKDK-K--------------------------------VLDEVVERSLRGAALWDEVKDRL-KS 141 (249)
T ss_pred -ccHHHHHHhHHHhcCCCch-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-hc
Confidence 8999999886532211000 0 00122344566677643221111 23
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
....|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.+ + ++|+.++|+..++.+.+|++++|+
T Consensus 142 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l~ 218 (249)
T PRK14253 142 HAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFFL 218 (249)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999998743 3 455667788889999999999999
Q ss_pred CCeEEEEcChhHH
Q 000787 400 DGQIVYQGPRELV 412 (1286)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1286)
+|++++.|+.+++
T Consensus 219 ~G~i~~~g~~~~~ 231 (249)
T PRK14253 219 MGELVEHDDTQVI 231 (249)
T ss_pred CCEEEEeCCHHHH
Confidence 9999999998765
No 482
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.3e-34 Score=315.07 Aligned_cols=209 Identities=26% Similarity=0.408 Sum_probs=168.5
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|+++.++. ..+.+|+|+|++|++|++++|+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 667888776531 12459999999999999999999999999999999999865 45799999998653
Q ss_pred h---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccC------CCCCC
Q 000787 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVG------LPGVS 1006 (1286)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~~ 1006 (1286)
. ...++.++|++|++.+++ .|+.|++.+... ... ...+.++++.+++.+..+..+. .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 234567999999988776 699999876421 111 2345678888888776665431 01235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++.. .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~--~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL--LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH--HHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 899999999863 479999999986 68
Q ss_pred EEEeC
Q 000787 1087 EIYVG 1091 (1286)
Q Consensus 1087 ~~y~G 1091 (1286)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 87654
No 483
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=317.75 Aligned_cols=210 Identities=25% Similarity=0.330 Sum_probs=167.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcc----ccceEEEecCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV----PQRTAAYISQHDNHIG 239 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~ 239 (1286)
++|+|+|++|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 35 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~ 114 (276)
T PRK14271 35 TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFP 114 (276)
T ss_pred EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCC
Confidence 4999999999999999999999999999999999998851 012899999998875431 2467999999987777
Q ss_pred CCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccccccccccc
Q 000787 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1286)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1286)
+||+||+.++...... ... .+....+..+++.+||.+..++.. +.
T Consensus 115 -~tv~eni~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~~ 159 (276)
T PRK14271 115 -MSIMDNVLAGVRAHKL-VPR--------------------------------KEFRGVAQARLTEVGLWDAVKDRL-SD 159 (276)
T ss_pred -ccHHHHHHHHHHhccC-CCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-hC
Confidence 8999999876432110 000 001123455677888865432222 23
Q ss_pred ccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEec
Q 000787 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1286)
Q Consensus 320 ~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1286)
.+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. . ++|+.++|+..++.+++|++++|+
T Consensus 160 ~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l~ 236 (276)
T PRK14271 160 SPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALFF 236 (276)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999998743 3 456667888899999999999999
Q ss_pred CCeEEEEcChhHHH
Q 000787 400 DGQIVYQGPRELVL 413 (1286)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1286)
+|++++.|+++++.
T Consensus 237 ~G~i~~~g~~~~~~ 250 (276)
T PRK14271 237 DGRLVEEGPTEQLF 250 (276)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999998774
No 484
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=315.54 Aligned_cols=216 Identities=22% Similarity=0.297 Sum_probs=175.4
Q ss_pred eeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--ce--EEEEEEEc
Q 000787 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGNITIS 930 (1286)
Q Consensus 855 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~~--~~G~i~i~ 930 (1286)
.+.++++++.++ ++.+|+|+||.+.+||+++|+|+||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 378888888763 34699999999999999999999999999999999997642 21 23666666
Q ss_pred CccCC---hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----ccccccCCC
Q 000787 931 GYPKK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGLP 1003 (1286)
Q Consensus 931 g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~~ 1003 (1286)
|.+.. ...+++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 66542 22345679999999998889999999998743321 1123344567889999999864 23332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 000787 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1286)
Q Consensus 1004 ~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~ 1083 (1286)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999864 699999999986 47788999999985
Q ss_pred CcEEEEeCCC
Q 000787 1084 GGQEIYVGPL 1093 (1286)
Q Consensus 1084 gG~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 799999875
No 485
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=314.84 Aligned_cols=211 Identities=21% Similarity=0.324 Sum_probs=165.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCcc-----ccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1286)
++|+|+|+++++|++++|+||||||||||+++|+|..+ |+...+|+|+++|.++.... .++.++|++|++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 98 (251)
T PRK14244 19 QILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPF 98 (251)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccc
Confidence 49999999999999999999999999999999999986 21112899999998764321 246799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+. ||+||+.+.....+..... ......++.+++.+||.+...+.+ +
T Consensus 99 ~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (251)
T PRK14244 99 PK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL-K 144 (251)
T ss_pred cC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 75 9999998864322110000 001123456788889865322222 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+..++.+.+|+|++|
T Consensus 145 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 221 (251)
T PRK14244 145 DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAFF 221 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999863 34 55566778888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 222 QSGRIVEYNTTQEIF 236 (251)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 486
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=313.95 Aligned_cols=210 Identities=19% Similarity=0.266 Sum_probs=165.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++||+|++.++
T Consensus 18 ~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 97 (251)
T PRK14249 18 QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPF 97 (251)
T ss_pred eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccC
Confidence 49999999999999999999999999999999999998741 1259999999887432 1246799999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+. ||+||+.|+....+.... + +....++..++.+||.+..... .+
T Consensus 98 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~-~~ 142 (251)
T PRK14249 98 PK-SIFDNVAFGPRMLGTTAQ-S--------------------------------RLDEVVEKSLRQAALWDEVKDN-LH 142 (251)
T ss_pred cC-cHHHHHhhHHHhcCCChh-h--------------------------------HHHHHHHHHHHHhCCchhhhhH-hh
Confidence 75 999999987543221100 0 0011234456666664321111 13
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+....|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++ + .+ .+|+.++|+..++.+.+|+|++|
T Consensus 143 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~-~tilivsh~~~~~~~~~d~i~~l 219 (251)
T PRK14249 143 KSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQEL-K-QN-YTIAIVTHNMQQAARASDWTGFL 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-h-cC-CEEEEEeCCHHHHHhhCCEEEEE
Confidence 445679999999999999999999999999999999999999999999986 3 33 55666788889999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 220 LTGDLVEYGRTGEIF 234 (251)
T ss_pred eCCeEEEeCCHHHHH
Confidence 999999999988764
No 487
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.3e-34 Score=309.14 Aligned_cols=197 Identities=28% Similarity=0.370 Sum_probs=164.6
Q ss_pred eEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000787 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1286)
Q Consensus 856 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1286)
++++|++..++ ++.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56788877663 2469999999999999999999999999999999999865 46799999997653
Q ss_pred hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 000787 936 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1286)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqr 1015 (1286)
...+++.++|++|++.+++.+||+|++.+....+. .. ++.++++++.++|.+..+..+ ..||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22256678999999888888999999987643321 11 234788999999987666553 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 000787 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1286)
Q Consensus 1016 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~ 1082 (1286)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++.. +. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~-~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLG-LP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchh-hc-c-CcEEeec
Confidence 999999999999999999999999999999999999988789999999999863 43 3 8887774
No 488
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=314.90 Aligned_cols=210 Identities=21% Similarity=0.305 Sum_probs=164.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+||||||||||+++|+|..++.. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 99 (253)
T PRK14261 20 HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNPF 99 (253)
T ss_pred eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCccC
Confidence 49999999999999999999999999999999999875311 1389999999987543 1245799999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ .||+||+.|+.+..+.... ......++.+++.++|.+...+.. +
T Consensus 100 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 144 (253)
T PRK14261 100 P-KSIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL-H 144 (253)
T ss_pred c-ccHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-h
Confidence 7 4999999987543221000 001123445566777643211111 2
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.+.+|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~l 221 (253)
T PRK14261 145 DSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGFM 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 3 45556778888999999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000787 399 SDGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1286)
++|+++..|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 222 YLGKLIEFDKTTQIF 236 (253)
T ss_pred ECCEEEEcCCHHHHH
Confidence 999999999988763
No 489
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=319.12 Aligned_cols=203 Identities=21% Similarity=0.357 Sum_probs=162.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCc-----cccceEEEecCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1286)
.+|+|+|+.|++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 53 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 53 EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 38999999999999999999999999999999999854 35 99999999886432 1245799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCc----cc
Q 000787 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VC 311 (1286)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 311 (1286)
.+++. ||+||+.|+....+.... + .....+.++++.+|+. +.
T Consensus 130 ~l~~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~ 175 (286)
T PRK14275 130 NPFPK-SIFDNIAYGPRLHGINDK-K--------------------------------QLEEIVEKSLRKAALWDEVSDR 175 (286)
T ss_pred CCCcc-CHHHHHHhHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHhCCccchhhH
Confidence 87774 999999987543211000 0 0112244566677763 22
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000787 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1286)
Q Consensus 312 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1286)
.+ ..+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.++
T Consensus 176 ~~-----~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~~ 247 (286)
T PRK14275 176 LD-----KNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASRV 247 (286)
T ss_pred hh-----CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHh
Confidence 23 34557999999999999999999999999999999999999999999998642 3 4566678888999999
Q ss_pred cCcEEEecCCeEEEEcChhHHH
Q 000787 392 FDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
+|++++|++|++++.|+++++.
T Consensus 248 ~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 248 SDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988764
No 490
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-33 Score=319.64 Aligned_cols=198 Identities=23% Similarity=0.228 Sum_probs=159.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcc---ccceEEEecCCCCCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1286)
.+|+|+|+.|++|++++|+|||||||||||++|+|+++ . +|+|.++|.++.... .++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 38999999999999999999999999999999999997 5 899999999876543 2467999999988876 59
Q ss_pred HHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCC-------ccccccc
Q 000787 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL-------DVCADTM 315 (1286)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~dt~ 315 (1286)
|+||+.+... ...+.. ...++.+|| +...|+.
T Consensus 93 v~~nl~~~~~-----~~~~~~------------------------------------~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDEEI------------------------------------WKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHHHH------------------------------------HHHHHHcCCHHHHHhCcccccce
Confidence 9999963211 011111 112223333 3455677
Q ss_pred ccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcE
Q 000787 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1286)
Q Consensus 316 vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1286)
+++ ....||||||||++||||++.+|+|++|||||++||+.+...+.+.|++.. . +++|+.++|+...+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--A-DCTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--C-CCEEEEEECCHHHHH-hCCEE
Confidence 766 356799999999999999999999999999999999999999999999752 3 445566777776665 59999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000787 396 ILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1286)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999865
No 491
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=315.24 Aligned_cols=212 Identities=22% Similarity=0.295 Sum_probs=168.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 3899999999999999999999999999999999999873 12479999999886321 1245799999988777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ +||+||+.+.....+.... .+....+..+++.+++.+..+... +
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 145 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWRPK---------------------------------LEIDDIVESALKDADLWDEIKHKI-H 145 (261)
T ss_pred c-ccHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCcchhhhHh-c
Confidence 7 8999999886432211000 001123456778888754222111 3
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
+.+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|+..++.+++|+|++|
T Consensus 146 ~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~-~~tiiivsH~~~~i~~~~d~i~~l 224 (261)
T PRK14258 146 KSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRS-ELTMVIVSHNLHQVSRLSDFTAFF 224 (261)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHhcCEEEEE
Confidence 4456799999999999999999999999999999999999999999999875433 455555788889999999999999
Q ss_pred cC-----CeEEEEcChhHHH
Q 000787 399 SD-----GQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~~-----G~iv~~G~~~~~~ 413 (1286)
++ |+++++|+++++.
T Consensus 225 ~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 225 KGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred ccCCCcCceEEEeCCHHHHH
Confidence 99 9999999999874
No 492
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=319.13 Aligned_cols=209 Identities=25% Similarity=0.335 Sum_probs=164.2
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++. .+..+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 56777766631 11358999999999999999999999999999999999876 468999999976532
Q ss_pred ---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHH-----HHHHHHHHHc--CCCcccccccCCCCCC
Q 000787 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRK-----MFIDEVMELV--ELNPLRQSLVGLPGVS 1006 (1286)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~ 1006 (1286)
...++.++|++|++.+++ .||+||+.+.... ....... ..+++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567999999988776 6999999875321 1111111 1234445544 444444332 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|.|||+++|++.. + +.+|++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLST-I-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCEEEEecC-Ce
Confidence 799999999999999999999999999999999999999999999986 48999999999963 5 45999999986 68
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 9888874
No 493
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=315.96 Aligned_cols=217 Identities=21% Similarity=0.240 Sum_probs=176.1
Q ss_pred CceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCC--c-eEEEEEEE
Q 000787 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITI 929 (1286)
Q Consensus 853 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i 929 (1286)
+..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + +.+|+|.+
T Consensus 14 ~~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~ 80 (265)
T PRK14252 14 QQKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIIL 80 (265)
T ss_pred CceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEE
Confidence 34588999998874 24699999999999999999999999999999999997652 1 26899999
Q ss_pred cCccCC-------hhcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCc----cccc
Q 000787 930 SGYPKK-------QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQS 998 (1286)
Q Consensus 930 ~g~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~ 998 (1286)
+|.+.. ...+++.++|++|++.+++. |++||+.+....... ......++.++++++.+++.+ ..+.
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~ 157 (265)
T PRK14252 81 HPDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGV--KRRSILEERVENALRNAALWDEVKDRLGD 157 (265)
T ss_pred cCccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCC--ChHHHHHHHHHHHHHHcCCchhhhHHHhC
Confidence 987542 12345679999999888875 999999876432211 111223456788888888742 2233
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEE
Q 000787 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1078 (1286)
Q Consensus 999 ~~g~~~~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~ 1078 (1286)
. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++
T Consensus 158 ~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i 230 (265)
T PRK14252 158 L-----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYT 230 (265)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEE
Confidence 2 457999999999999999999999999999999999999999999999875 699999999986 477899999
Q ss_pred EEEecCcEEEEeCCC
Q 000787 1079 FLMKRGGQEIYVGPL 1093 (1286)
Q Consensus 1079 ~lL~~gG~~~y~G~~ 1093 (1286)
++|++ |+++..|+.
T Consensus 231 ~~l~~-G~i~~~g~~ 244 (265)
T PRK14252 231 AYMYM-GELIEFGAT 244 (265)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 799999875
No 494
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.3e-34 Score=356.64 Aligned_cols=226 Identities=25% Similarity=0.373 Sum_probs=170.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhh--cCCCCCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhHh
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDR--VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1286)
.++.....+|+.++++.+++ ..+.... ...+....+++|+||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~-----~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~------------------------- 346 (529)
T TIGR02868 297 LTRVRAAAERIEEVTGAKGP-----RPEGVVPAAGALGLGKPTLELRDLSFGYPG------------------------- 346 (529)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----cCCCCCCCCcccCCCCceEEEEEEEEecCC-------------------------
Confidence 56778888999888876554 1110000 001112357999999999842
Q ss_pred hhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEec
Q 000787 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1286)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1286)
+ .++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++. . ++.++||+
T Consensus 347 -----~---~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~---~G~I~i~g~~i~~~-~~~lr~~i~~V~ 414 (529)
T TIGR02868 347 -----S---PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL---QGEVTLDGVSVSSL-QDELRRRISVFA 414 (529)
T ss_pred -----C---CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEhhhH-HHHHHhheEEEc
Confidence 1 13999999999999999999999999999999999999998 99999999998876 4 36899999
Q ss_pred CCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000787 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1286)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1286)
|++.+| +.||+|||.++.. ....+.+.++++.. + .++. +..|+++.
T Consensus 415 Q~~~lF-~~TI~eNI~~g~~----~~~~e~i~~al~~a---~------------------------l~~~--i~~lp~Gl 460 (529)
T TIGR02868 415 QDAHLF-DTTVRDNLRLGRP----DATDEELWAALERV---G------------------------LADW--LRSLPDGL 460 (529)
T ss_pred cCcccc-cccHHHHHhccCC----CCCHHHHHHHHHHc---C------------------------CHHH--HHhCcccc
Confidence 987655 5699999998631 11222222222211 1 1111 23478889
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEe
Q 000787 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLL 382 (1286)
Q Consensus 313 dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~ 382 (1286)
||.||+.+. .||||||||++||||++++|+||+||||||+||+.++..|.+.|++.. .++|+|+..|
T Consensus 461 dT~ige~G~-~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~--~~~TvIiItH 527 (529)
T TIGR02868 461 DTVLGEGGA-RLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL--SGKTVVVITH 527 (529)
T ss_pred cchhccccC-cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCEEEEEec
Confidence 999998765 599999999999999999999999999999999999999999998742 3456666444
No 495
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.1e-34 Score=387.37 Aligned_cols=257 Identities=16% Similarity=0.215 Sum_probs=196.4
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHhhhhcCC--C-CCceEEEEeeeEEEEEEecCcCcCCchHHHHHHHHHHHHhH
Q 000787 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI--D-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1286)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1286)
.+....++||+.++.+.++|. ....+.... . .+..+|+|+||++.|...
T Consensus 1246 ~e~~~~s~eRi~~~~~~~~e~-----~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~----------------------- 1297 (1522)
T TIGR00957 1246 METNIVAVERLKEYSETEKEA-----PWQIQETAPPSGWPPRGRVEFRNYCLRYRED----------------------- 1297 (1522)
T ss_pred HHHHHHHHHHHHHHhcCCCCc-----cccccCCCCCCCCCCCCcEEEEEEEEEeCCC-----------------------
Confidence 567888999999998766551 100011011 1 124689999999998531
Q ss_pred hhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc---cceEEEe
Q 000787 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1286)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1286)
..++|+|||++|+|||.++|+|++|||||||+++|.|+++|+ +|+|.+||.++++... |+.++||
T Consensus 1298 ---------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~---~G~I~IdG~dI~~i~~~~LR~~i~iV 1365 (1522)
T TIGR00957 1298 ---------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESA---EGEIIIDGLNIAKIGLHDLRFKITII 1365 (1522)
T ss_pred ---------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCC---CCeEEECCEEccccCHHHHHhcCeEE
Confidence 124999999999999999999999999999999999999998 9999999999987754 5789999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCccc
Q 000787 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1286)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1286)
||++.+|. .||||||..... ...+.+.++.+. .++ .+.+ -.|+++
T Consensus 1366 pQdp~LF~-gTIr~NLdp~~~-----~sdeei~~al~~---a~l------------------------~~~I--~~lp~G 1410 (1522)
T TIGR00957 1366 PQDPVLFS-GSLRMNLDPFSQ-----YSDEEVWWALEL---AHL------------------------KTFV--SALPDK 1410 (1522)
T ss_pred CCCCcccC-ccHHHHcCcccC-----CCHHHHHHHHHH---cCc------------------------HHHH--hhCccC
Confidence 99887776 599999972111 111222222211 110 1111 235678
Q ss_pred ccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000787 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1286)
Q Consensus 312 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1286)
.||.||+.+. .||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++|+| ++.|.. ++...
T Consensus 1411 Ldt~v~e~G~-~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~--~~~TvI-~IAHRl-~ti~~ 1485 (1522)
T TIGR00957 1411 LDHECAEGGE-NLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF--EDCTVL-TIAHRL-NTIMD 1485 (1522)
T ss_pred CCceecCCCC-cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCEEE-EEecCH-HHHHh
Confidence 8999998655 699999999999999999999999999999999999999999998742 344544 455554 66777
Q ss_pred cCcEEEecCCeEEEEcChhHHHH
Q 000787 392 FDDIILLSDGQIVYQGPRELVLE 414 (1286)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1286)
+|+|++|++|+|+++|+++++++
T Consensus 1486 ~DrIlVld~G~IvE~G~~~eLl~ 1508 (1522)
T TIGR00957 1486 YTRVIVLDKGEVAEFGAPSNLLQ 1508 (1522)
T ss_pred CCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999875
No 496
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=4.1e-34 Score=319.09 Aligned_cols=210 Identities=28% Similarity=0.404 Sum_probs=162.2
Q ss_pred EEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh
Q 000787 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1286)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1286)
+++|+++.++.. .++.+|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 467777665310 12358999999999999999999999999999999999875 468999999976532
Q ss_pred ---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCcccccc-------cCCCCCC
Q 000787 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSL-------VGLPGVS 1006 (1286)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~-------~g~~~~~ 1006 (1286)
...++.++|++|++.+++ .||+|++.+....+ ..+ .+++.++..++.+..+.+ .. ..+.
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 233457999999987776 69999998743111 111 122333333333221111 11 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 000787 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1286)
Q Consensus 1007 ~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~gG~ 1086 (1286)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|+++. + +.||++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~-~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLST-I-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-hhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999987 79999999999863 4 48999999986 78
Q ss_pred EEEeCCC
Q 000787 1087 EIYVGPL 1093 (1286)
Q Consensus 1087 ~~y~G~~ 1093 (1286)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 9998874
No 497
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=315.45 Aligned_cols=210 Identities=21% Similarity=0.277 Sum_probs=164.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----cccceEEEecCCCCCC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1286)
.+|+|+|+++++|++++|+|+|||||||||++|+|.++++. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 48999999999999999999999999999999999987531 1389999999887431 1235799999998877
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccccccccc
Q 000787 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1286)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1286)
+ +||+||+.++....+.... .+....++.+++.+|+....... -+
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~-~~ 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLPQ---------------------------------ADLDEIVESALKGAALWQEVKDK-LN 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCcchhhhH-hc
Confidence 7 8999999886532210000 00112344566777774211111 12
Q ss_pred cccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCcEEEe
Q 000787 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1286)
Q Consensus 319 ~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1286)
..+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+.+++.+++|++++|
T Consensus 146 ~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~i~~~~d~i~~l 222 (259)
T PRK14260 146 KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLR--SE-LTIAIVTHNMQQATRVSDFTAFF 222 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 3456799999999999999999999999999999999999999999999864 23 45666788889999999999999
Q ss_pred c-----CCeEEEEcChhHHH
Q 000787 399 S-----DGQIVYQGPRELVL 413 (1286)
Q Consensus 399 ~-----~G~iv~~G~~~~~~ 413 (1286)
+ +|++++.|+++++.
T Consensus 223 ~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 223 STDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eccCCCCceEEEeCCHHHHh
Confidence 8 59999999998863
No 498
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.7e-34 Score=355.32 Aligned_cols=212 Identities=28% Similarity=0.419 Sum_probs=179.9
Q ss_pred ceeEEeceeeEeeccchhhhcccccCceEEeecccccccCCcEEEEEccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000787 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1286)
Q Consensus 854 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1286)
..++|+|++|.++. +++.+|+|+|++++||+++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999999852 12358999999999999999999999999999999999876 468999999987
Q ss_pred CCh---hcccceEEEeccCCCCCCCCCHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHcCCCccc------ccccCCCC
Q 000787 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR------QSLVGLPG 1004 (1286)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~------~~~~g~~~ 1004 (1286)
+.+ ..+++.++||+|++.+++ .|++||+.++. ++.+ ++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PNAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----CccC----HHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 653 456788999999998876 59999998752 1222 34578899999987654 4555544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 000787 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1286)
Q Consensus 1005 ~~~lSgGqrqrl~ia~~L~~~p~il~LDEPTsgLD~~~~~~v~~~l~~~~~~g~tvi~t~H~ps~~i~~~~D~~~lL~~g 1084 (1286)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +|+|+|+++|+++. ...+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~--~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTG--LEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhH--HHhCCEEEEEeC-
Confidence 46799999999999999999999999999999999999999999999985 58999999999963 567999999985
Q ss_pred cEEEEeCCC
Q 000787 1085 GQEIYVGPL 1093 (1286)
Q Consensus 1085 G~~~y~G~~ 1093 (1286)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 799999874
No 499
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.2e-33 Score=313.86 Aligned_cols=206 Identities=26% Similarity=0.368 Sum_probs=164.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCcc-----CCCccc-------cceEEEecC
Q 000787 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1286)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1286)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 17 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~q 93 (253)
T TIGR02323 17 KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVHQ 93 (253)
T ss_pred eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhhhcceEEEEe
Confidence 3899999999999999999999999999999999999998 9999999976 543321 245899999
Q ss_pred CCC--CCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcc-
Q 000787 234 HDN--HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1286)
Q Consensus 234 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1286)
++. ..+.+|+.||+.+....... .... +....++++++.+|+.+
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~--------------------------------~~~~~~~~~l~~l~l~~~ 140 (253)
T TIGR02323 94 NPRDGLRMRVSAGANIGERLMAIGA-RHYG--------------------------------NIRAAAHDWLEEVEIDPT 140 (253)
T ss_pred CcccccCccccHHHHHHHHHHHhcc-cchH--------------------------------HHHHHHHHHHHHcCCChh
Confidence 864 45667999999754211000 0000 01123567889999963
Q ss_pred cccccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000787 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1286)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1286)
..++. ++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.... +.+||.++|+..++..
T Consensus 141 ~~~~~-----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~vsH~~~~~~~ 214 (253)
T TIGR02323 141 RIDDL-----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDL-GLAVIIVTHDLGVARL 214 (253)
T ss_pred hhhcC-----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHH
Confidence 44443 45699999999999999999999999999999999999999999999875433 4455557888889999
Q ss_pred hcCcEEEecCCeEEEEcChhHHH
Q 000787 391 LFDDIILLSDGQIVYQGPRELVL 413 (1286)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1286)
.+|++++|++|++++.|+.+++.
T Consensus 215 ~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 215 LAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred hcCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988764
No 500
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-33 Score=279.72 Aligned_cols=202 Identities=28% Similarity=0.394 Sum_probs=171.4
Q ss_pred CccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCccc-------cceEEEec
Q 000787 160 SKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYIS 232 (1286)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 232 (1286)
....+.+||++|++.|++||.++|+|||||||||||-+|+|+-+|+ +|+|.+.|+++..... .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3446788999999999999999999999999999999999999998 9999999999866542 26899999
Q ss_pred CCCCCCCCCCHHHHHHHHhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhhHHHHHHHHHHcCCcccc
Q 000787 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1286)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1286)
|...++|+||-.||+...+.++|-+.+. ........|+.+||.+-.
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~~----------------------------------~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSAD----------------------------------SRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCcccc----------------------------------HHHHHHHHHHHhCccccc
Confidence 9999999999999999988777632210 112345578899998765
Q ss_pred cccccccccCCCChhHhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000787 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1286)
Q Consensus 313 dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1286)
+ .++.+|||||+|||+||||++..|+|||-||||-+||..|..+|.+.|-.+.+ ..++++|.++|+ +.+..-|
T Consensus 141 ~-----HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnr-e~G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 T-----HYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNR-ERGTTLVLVTHD-PQLAARC 213 (228)
T ss_pred c-----cCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhh-hcCceEEEEeCC-HHHHHhh
Confidence 4 44668999999999999999999999999999999999999999999987765 456667767776 5677889
Q ss_pred CcEEEecCCeEEE
Q 000787 393 DDIILLSDGQIVY 405 (1286)
Q Consensus 393 D~iilL~~G~iv~ 405 (1286)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
Done!